Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0382800 | TKY58158.1 | 59.789 | 853 | 197 | 21 | 6 | 717 | 3 | 850 | 0.0 | 709 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0382800 | sp|Q8RWY7|CYP95_ARATH | 65.896 | 173 | 46 | 1 | 6 | 165 | 3 | 175 | 1.68e-71 | 254 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0382800 | A0A0S3RNX5 | 57.602 | 809 | 214 | 24 | 6 | 721 | 3 | 775 | 0.0 | 632 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0382800 | Msa0525030 | 0.946681 | 2.900860e-105 | -8.615850e-47 |
Msa0382800 | Msa1362260 | 0.974905 | 5.491330e-139 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0382800 | MtrunA17_Chr1g0149061 | 60.560 | 857 | 224 | 17 | 6 | 836 | 3 | 771 | 0.0 | 627 |
Msa0382800 | MtrunA17_Chr3g0138061 | 85.520 | 587 | 25 | 6 | 303 | 839 | 319 | 895 | 0.0 | 617 |
Msa0382800 | MtrunA17_Chr7g0260441 | 54.118 | 170 | 65 | 1 | 8 | 164 | 5 | 174 | 9.50e-57 | 206 |
Msa0382800 | MtrunA17_Chr7g0260441 | 40.441 | 272 | 99 | 9 | 604 | 839 | 407 | 651 | 2.07e-21 | 99.8 |
Msa0382800 | MtrunA17_Chr4g0038431 | 47.337 | 169 | 75 | 2 | 9 | 164 | 3 | 170 | 6.28e-43 | 153 |
Msa0382800 | MtrunA17_Chr4g0045321 | 43.716 | 183 | 87 | 3 | 12 | 178 | 6 | 188 | 2.08e-38 | 147 |
Msa0382800 | MtrunA17_Chr7g0274841 | 46.154 | 169 | 77 | 2 | 9 | 164 | 3 | 170 | 3.74e-38 | 140 |
Msa0382800 | MtrunA17_Chr3g0104751 | 46.988 | 166 | 74 | 2 | 12 | 164 | 36 | 200 | 6.56e-38 | 140 |
Msa0382800 | MtrunA17_Chr3g0145501 | 44.118 | 170 | 81 | 2 | 12 | 168 | 14 | 182 | 3.22e-37 | 138 |
Msa0382800 | MtrunA17_Chr3g0113441 | 46.988 | 166 | 74 | 2 | 12 | 164 | 66 | 230 | 8.78e-37 | 138 |
Msa0382800 | MtrunA17_Chr8g0374621 | 43.316 | 187 | 88 | 4 | 9 | 178 | 3 | 188 | 2.18e-35 | 138 |
Msa0382800 | MtrunA17_Chr8g0353571 | 41.714 | 175 | 84 | 4 | 5 | 164 | 13 | 184 | 8.34e-33 | 125 |
Msa0382800 | MtrunA17_Chr1g0193711 | 41.040 | 173 | 79 | 3 | 12 | 169 | 87 | 251 | 6.94e-32 | 125 |
Msa0382800 | MtrunA17_Chr7g0270991 | 39.326 | 178 | 74 | 4 | 12 | 169 | 98 | 261 | 2.53e-31 | 123 |
Msa0382800 | MtrunA17_Chr4g0037281 | 42.177 | 147 | 70 | 3 | 12 | 144 | 48 | 193 | 3.59e-27 | 110 |
Msa0382800 | MtrunA17_Chr1g0213971 | 40.116 | 172 | 76 | 5 | 12 | 165 | 79 | 241 | 1.35e-26 | 109 |
Msa0382800 | MtrunA17_Chr8g0351571 | 35.606 | 132 | 55 | 4 | 29 | 144 | 15 | 132 | 1.32e-14 | 72.4 |
Msa0382800 | MtrunA17_Chr5g0401141 | 34.014 | 147 | 68 | 5 | 29 | 159 | 359 | 492 | 6.34e-13 | 72.4 |
Msa0382800 | MtrunA17_Chr7g0266721 | 33.908 | 174 | 85 | 6 | 1 | 160 | 1 | 158 | 5.16e-12 | 65.1 |
Msa0382800 | MtrunA17_Chr2g0321111 | 34.932 | 146 | 70 | 5 | 30 | 161 | 477 | 611 | 5.16e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0382800 | AT4G32420.1 | 65.896 | 173 | 46 | 1 | 6 | 165 | 3 | 175 | 1.71e-72 | 254 |
Msa0382800 | AT4G32420.5 | 65.896 | 173 | 46 | 1 | 6 | 165 | 3 | 175 | 1.71e-72 | 254 |
Msa0382800 | AT4G32420.3 | 65.896 | 173 | 46 | 1 | 6 | 165 | 3 | 175 | 1.71e-72 | 254 |
Msa0382800 | AT4G32420.6 | 65.896 | 173 | 46 | 1 | 6 | 165 | 3 | 175 | 1.71e-72 | 254 |
Msa0382800 | AT4G32420.4 | 64.557 | 158 | 43 | 1 | 6 | 150 | 3 | 160 | 7.33e-63 | 227 |
Msa0382800 | AT3G63400.2 | 56.000 | 175 | 64 | 1 | 6 | 167 | 3 | 177 | 2.70e-59 | 207 |
Msa0382800 | AT3G63400.3 | 56.000 | 175 | 64 | 1 | 6 | 167 | 3 | 177 | 1.93e-58 | 210 |
Msa0382800 | AT3G63400.3 | 38.362 | 232 | 87 | 11 | 624 | 831 | 371 | 570 | 1.62e-11 | 68.2 |
Msa0382800 | AT3G63400.4 | 56.000 | 175 | 64 | 1 | 6 | 167 | 3 | 177 | 1.93e-58 | 210 |
Msa0382800 | AT3G63400.4 | 38.362 | 232 | 87 | 11 | 624 | 831 | 371 | 570 | 1.62e-11 | 68.2 |
Msa0382800 | AT3G63400.1 | 56.000 | 175 | 64 | 1 | 6 | 167 | 3 | 177 | 1.93e-58 | 210 |
Msa0382800 | AT3G63400.1 | 38.362 | 232 | 87 | 11 | 624 | 831 | 371 | 570 | 1.62e-11 | 68.2 |
Msa0382800 | AT3G56070.1 | 48.521 | 169 | 73 | 2 | 9 | 164 | 3 | 170 | 1.29e-42 | 153 |
Msa0382800 | AT3G56070.2 | 48.521 | 169 | 73 | 2 | 9 | 164 | 3 | 170 | 1.29e-42 | 153 |
Msa0382800 | AT4G38740.1 | 48.521 | 169 | 71 | 4 | 10 | 164 | 4 | 170 | 1.24e-41 | 150 |
Msa0382800 | AT2G21130.1 | 48.235 | 170 | 72 | 4 | 9 | 164 | 4 | 171 | 4.12e-41 | 149 |
Msa0382800 | AT4G34870.1 | 45.562 | 169 | 78 | 2 | 9 | 164 | 3 | 170 | 3.31e-40 | 146 |
Msa0382800 | AT5G58710.1 | 46.988 | 166 | 74 | 2 | 12 | 164 | 37 | 201 | 5.38e-40 | 147 |
Msa0382800 | AT2G16600.1 | 46.154 | 169 | 77 | 2 | 9 | 164 | 4 | 171 | 7.88e-40 | 145 |
Msa0382800 | AT3G55920.1 | 43.976 | 166 | 79 | 2 | 12 | 164 | 61 | 225 | 7.39e-37 | 139 |
Msa0382800 | AT2G29960.1 | 46.386 | 166 | 75 | 2 | 12 | 164 | 34 | 198 | 1.09e-36 | 137 |
Msa0382800 | AT2G29960.3 | 46.386 | 166 | 75 | 2 | 12 | 164 | 34 | 198 | 1.09e-36 | 137 |
Msa0382800 | AT2G15790.1 | 44.910 | 167 | 78 | 2 | 12 | 164 | 6 | 172 | 1.53e-36 | 142 |
Msa0382800 | AT2G38730.1 | 44.571 | 175 | 79 | 4 | 5 | 164 | 27 | 198 | 1.39e-34 | 131 |
Msa0382800 | AT3G22920.1 | 45.402 | 174 | 67 | 8 | 9 | 164 | 3 | 166 | 9.17e-32 | 124 |
Msa0382800 | AT3G62030.3 | 43.836 | 146 | 61 | 2 | 12 | 144 | 96 | 233 | 1.13e-31 | 125 |
Msa0382800 | AT3G62030.1 | 43.836 | 146 | 61 | 2 | 12 | 144 | 97 | 234 | 1.13e-31 | 125 |
Msa0382800 | AT2G16600.2 | 43.590 | 156 | 78 | 3 | 9 | 164 | 4 | 149 | 3.71e-31 | 119 |
Msa0382800 | AT2G29960.2 | 43.373 | 166 | 70 | 3 | 12 | 164 | 34 | 188 | 5.00e-31 | 120 |
Msa0382800 | AT3G62030.2 | 43.151 | 146 | 62 | 2 | 12 | 144 | 150 | 287 | 1.26e-30 | 123 |
Msa0382800 | AT5G13120.1 | 39.766 | 171 | 76 | 5 | 12 | 164 | 92 | 253 | 2.46e-29 | 118 |
Msa0382800 | AT5G13120.2 | 39.766 | 171 | 76 | 5 | 12 | 164 | 88 | 249 | 3.47e-29 | 117 |
Msa0382800 | AT4G34960.1 | 39.041 | 146 | 75 | 2 | 12 | 144 | 49 | 193 | 4.09e-27 | 110 |
Msa0382800 | AT4G34960.2 | 43.220 | 118 | 53 | 2 | 12 | 116 | 49 | 165 | 2.69e-23 | 98.2 |
Msa0382800 | AT4G32420.2 | 64.615 | 65 | 23 | 0 | 101 | 165 | 1 | 65 | 3.69e-23 | 105 |
Msa0382800 | AT1G01940.1 | 35.606 | 132 | 55 | 4 | 29 | 144 | 15 | 132 | 3.48e-15 | 74.3 |
Msa0382800 | AT5G67530.1 | 33.140 | 172 | 80 | 7 | 5 | 160 | 340 | 492 | 1.19e-13 | 75.1 |
Msa0382800 | AT2G36130.1 | 35.616 | 146 | 69 | 5 | 29 | 160 | 24 | 158 | 7.53e-13 | 67.8 |
Msa0382800 | AT3G44600.1 | 34.694 | 147 | 69 | 5 | 30 | 161 | 491 | 625 | 1.71e-11 | 68.6 |
Find 297 sgRNAs with CRISPR-Local
Find 582 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGAGCTTGGCTTCAATTT+TGG | 0.135990 | 3_1:-85546948 | Msa0382800:three_prime_UTR |
CTGCTCCGGCGGGATCTTAC+AGG | 0.147945 | 3_1:+85548270 | None:intergenic |
CGACTTAAGCTCTTCCTTAA+TGG | 0.164360 | 3_1:+85548060 | None:intergenic |
TTCTTGGTCCCCTATGGTTT+TGG | 0.176501 | 3_1:-85546988 | Msa0382800:three_prime_UTR |
AAAGAATCCGCTGGTGTTTA+TGG | 0.176936 | 3_1:-85552702 | Msa0382800:CDS |
TCTCTTTCCATCTGGGCTTC+TGG | 0.187458 | 3_1:+85547061 | None:intergenic |
CTCTTTCTTGACACTCTTAC+AGG | 0.202131 | 3_1:+85547997 | None:intergenic |
CTCTTTCTTGACACTCTTAC+AGG | 0.202131 | 3_1:+85548168 | None:intergenic |
GAGTTGAATTTATAAAATTT+TGG | 0.220857 | 3_1:-85546690 | Msa0382800:three_prime_UTR |
TGCAGGAAATATATAGTCTT+TGG | 0.237460 | 3_1:-85550893 | Msa0382800:intron |
GCCGGTTAATATTTAGATTT+CGG | 0.248307 | 3_1:+85546568 | None:intergenic |
CTTCTGCTTAAGCTTCTTGC+AGG | 0.253683 | 3_1:+85548120 | None:intergenic |
ACGTTTATATTTATCTTTCT+TGG | 0.254704 | 3_1:+85550281 | None:intergenic |
GGTAGAGTTATTGCGGTATT+TGG | 0.295393 | 3_1:-85546778 | Msa0382800:three_prime_UTR |
AAGACAGTACTTGTGAAATT+AGG | 0.304276 | 3_1:-85546814 | Msa0382800:three_prime_UTR |
TCGAGCTCGGTAGCGTGGGC+TGG | 0.310680 | 3_1:+85547277 | None:intergenic |
GTGGGTGAGATTTGATGTTT+AGG | 0.317750 | 3_1:+85553907 | None:intergenic |
ACCAAGCCTCTCTTTCCATC+TGG | 0.320650 | 3_1:+85547053 | None:intergenic |
GCCCGGTGAGGGGCAGGAAG+GGG | 0.325208 | 3_1:-85548350 | Msa0382800:CDS |
CTTCTGCTTAAGCTTCTTGC+AGG | 0.337354 | 3_1:+85548192 | None:intergenic |
ACATAAGTCGCAGTCCATTA+AGG | 0.337448 | 3_1:-85548074 | Msa0382800:CDS |
CTTCTTGCAGGCGCTCTAAC+TGG | 0.340410 | 3_1:+85548132 | None:intergenic |
AGAAATAAAACATGGCATAT+TGG | 0.341058 | 3_1:+85546883 | None:intergenic |
CTTCTGCTTAAGCTTCTTGC+AGG | 0.342699 | 3_1:+85548021 | None:intergenic |
TGGGTGAGATTTGATGTTTA+GGG | 0.342786 | 3_1:+85553908 | None:intergenic |
CTCTTACTCATGGGTCGCTT+AGG | 0.348761 | 3_1:+85548594 | None:intergenic |
TGACGTGATGGATGTTCATT+TGG | 0.349070 | 3_1:-85548722 | Msa0382800:CDS |
CTCCCCTTCCTGCCCCTCAC+CGG | 0.353362 | 3_1:+85548348 | None:intergenic |
CGAACCAAATGGATTGGGCT+TGG | 0.359092 | 3_1:+85553947 | None:intergenic |
CTTCTGCTTAAGCTTCTTGC+AGG | 0.362875 | 3_1:+85547949 | None:intergenic |
TTGCTTAATGCTGGAATTTG+TGG | 0.364426 | 3_1:-85546909 | Msa0382800:three_prime_UTR |
CTTCTTGCAGGCGATCTAAC+TGG | 0.367082 | 3_1:+85548033 | None:intergenic |
ACCGAAATCTAAATATTAAC+CGG | 0.369009 | 3_1:-85546569 | Msa0382800:three_prime_UTR |
GCAGGAAATATATAGTCTTT+GGG | 0.369627 | 3_1:-85550892 | Msa0382800:intron |
ATAATCGCCGCAGTTATTCT+AGG | 0.375773 | 3_1:-85547864 | Msa0382800:CDS |
ACTGGGGAGCGAATGCGAAC+TGG | 0.377768 | 3_1:+85547233 | None:intergenic |
TCGGCTAATGCTTCTCTTTG+AGG | 0.379951 | 3_1:+85547912 | None:intergenic |
CGGGCCAAAGGTGAAATTCT+TGG | 0.382916 | 3_1:-85547004 | Msa0382800:exon |
CCTTCTGCTTTGCTTAATGC+TGG | 0.389464 | 3_1:-85546918 | Msa0382800:three_prime_UTR |
CGGCTAATGCTTCTCTTTGA+GGG | 0.390083 | 3_1:+85547913 | None:intergenic |
AGATTCAGACATGGAATCTT+CGG | 0.391915 | 3_1:-85550391 | Msa0382800:CDS |
GTGGATATTCTTACAGTTAC+CGG | 0.392368 | 3_1:+85553768 | None:intergenic |
GAGGCTTGTTGAAGGGCTTA+AGG | 0.393340 | 3_1:-85550870 | Msa0382800:CDS |
CTCTTCCTTTCTATGATGAA+TGG | 0.395839 | 3_1:+85548852 | None:intergenic |
TCCCCTTCCTGCCCCTCACC+GGG | 0.399388 | 3_1:+85548349 | None:intergenic |
CAATCCAAGCCCAATCCATT+TGG | 0.400605 | 3_1:-85553951 | Msa0382800:five_prime_UTR |
GAAGGAGCCCGGTGAGGGGC+AGG | 0.401536 | 3_1:-85548356 | Msa0382800:CDS |
TTTATGGATGTATCTATTGA+TGG | 0.403476 | 3_1:-85552686 | Msa0382800:CDS |
ATTTCACTGGACTCCTGCTC+CGG | 0.404898 | 3_1:+85547147 | None:intergenic |
AGGCTAAAGCATGATGGCCC+TGG | 0.405592 | 3_1:-85551113 | Msa0382800:CDS |
GAAGGTATAGAACCCCTTCC+CGG | 0.409280 | 3_1:-85547714 | Msa0382800:CDS |
CTTCTTGCAGGTGATCTAAC+TGG | 0.410400 | 3_1:+85547961 | None:intergenic |
CTTCTTGCAGGTGATCTAAC+TGG | 0.410400 | 3_1:+85548204 | None:intergenic |
CTTCCCCTTCTGATACGCTT+TGG | 0.410700 | 3_1:+85547766 | None:intergenic |
TTTCACCTTTGGCCCGAGTC+AGG | 0.412665 | 3_1:+85547011 | None:intergenic |
GATCGAAGCGCAGATCAAAA+AGG | 0.414608 | 3_1:-85550206 | Msa0382800:intron |
TTCACTTCTGTCAGATCTAT+AGG | 0.414935 | 3_1:+85548756 | None:intergenic |
CTCCTGCCGATGCTCCTAAC+AGG | 0.415459 | 3_1:+85548420 | None:intergenic |
GGAGAGGGGCGAGATCGATC+GGG | 0.416616 | 3_1:+85547197 | None:intergenic |
GCTCTTTCGTGATGATACTC+TGG | 0.416616 | 3_1:+85548239 | None:intergenic |
AGCCCGGTGAGGGGCAGGAA+GGG | 0.416897 | 3_1:-85548351 | Msa0382800:CDS |
GAGATAAACGCCGTGACAAA+AGG | 0.418043 | 3_1:-85550248 | Msa0382800:CDS |
CTCTAACTACTTTGTGATGC+AGG | 0.420031 | 3_1:+85553867 | None:intergenic |
CGAGCTCGGTAGCGTGGGCT+GGG | 0.420545 | 3_1:+85547278 | None:intergenic |
TTCGCATTCGCTCCCCAGTT+CGG | 0.421685 | 3_1:-85547229 | Msa0382800:CDS |
GTCTTTGGGAGGCTTGTTGA+AGG | 0.421721 | 3_1:-85550878 | Msa0382800:CDS |
GCAGGAGTCCAGTGAAATCT+AGG | 0.423588 | 3_1:-85547142 | Msa0382800:CDS |
GCATGGACAGGAGTCCTGTT+AGG | 0.427265 | 3_1:-85548434 | Msa0382800:CDS |
GTGAAATTCTTGGTCCCCTA+TGG | 0.428064 | 3_1:-85546994 | Msa0382800:exon |
ATACGCTTTGGCGAAGCATC+AGG | 0.429053 | 3_1:+85547778 | None:intergenic |
TTTGTGATGCAGGGGCAAAA+TGG | 0.430771 | 3_1:+85553877 | None:intergenic |
ATTGCGGTATTTGGTGGAAC+TGG | 0.436002 | 3_1:-85546769 | Msa0382800:three_prime_UTR |
CTCCTGTCAATGCTTCTAAC+AGG | 0.436698 | 3_1:+85548396 | None:intergenic |
TCTTACTCATGGGTCGCTTA+GGG | 0.437154 | 3_1:+85548595 | None:intergenic |
TGGAAAATTGCTTCACTACA+AGG | 0.439812 | 3_1:-85552234 | Msa0382800:CDS |
AGAGGTATCAGTTCAAATAC+TGG | 0.441968 | 3_1:-85552254 | Msa0382800:CDS |
TTTCACAAAGTGTAATAAGT+TGG | 0.442260 | 3_1:+85554001 | None:intergenic |
CCAAGCCTCTCTTTCCATCT+GGG | 0.443449 | 3_1:+85547054 | None:intergenic |
GTTTCCGAACCAAATGGATT+GGG | 0.444039 | 3_1:+85553942 | None:intergenic |
CTGGGGAGCGAATGCGAACT+GGG | 0.445099 | 3_1:+85547234 | None:intergenic |
ACTGCGGCGATTATTTCTAC+TGG | 0.445667 | 3_1:+85547873 | None:intergenic |
CAATCCATTTGGTTCGGAAA+CGG | 0.445953 | 3_1:-85553940 | Msa0382800:five_prime_UTR |
CGTTTCCGAACCAAATGGAT+TGG | 0.447431 | 3_1:+85553941 | None:intergenic |
CAGGGAATCTGGCAGTGATT+CGG | 0.448057 | 3_1:-85549173 | Msa0382800:CDS |
CAAATGGATTGGGCTTGGAT+TGG | 0.450097 | 3_1:+85553952 | None:intergenic |
GGGACCAAGAATTTCACCTT+TGG | 0.450099 | 3_1:+85547000 | None:intergenic |
AGGAGAGGGGCGAGATCGAT+CGG | 0.452882 | 3_1:+85547196 | None:intergenic |
ATGTTCATTTGGGCAAATCT+AGG | 0.455955 | 3_1:-85548711 | Msa0382800:intron |
CTGTAAGATCCCGCCGGAGC+AGG | 0.457333 | 3_1:-85548269 | Msa0382800:CDS |
CAAGCCCAATCCATTTGGTT+CGG | 0.459273 | 3_1:-85553946 | Msa0382800:five_prime_UTR |
GAAGCATTGACAGGAGTCCT+AGG | 0.459358 | 3_1:-85548389 | Msa0382800:CDS |
TGACAAAAGGCGAAGAAGAC+GGG | 0.459409 | 3_1:-85550235 | Msa0382800:CDS |
GCATTAGCCGAAGTCCTGTC+AGG | 0.459752 | 3_1:-85547900 | Msa0382800:CDS |
AGAAGCTTAAGCAGAAGCTC+TGG | 0.459949 | 3_1:-85547943 | Msa0382800:CDS |
CGGCGATGGTTCTCCTGACT+CGG | 0.465118 | 3_1:-85547024 | Msa0382800:CDS |
TGGGAGAACTCCTGCTCCGG+CGG | 0.467758 | 3_1:+85548259 | None:intergenic |
TGAAAGTCTTGATACTCAAC+AGG | 0.468987 | 3_1:-85549122 | Msa0382800:CDS |
TTCAAGATTATTGCCTTCAC+AGG | 0.470401 | 3_1:+85550500 | None:intergenic |
GAGCCCGGTGAGGGGCAGGA+AGG | 0.470848 | 3_1:-85548352 | Msa0382800:CDS |
ACAAAGTGTAATAAGTTGGT+TGG | 0.475950 | 3_1:+85554005 | None:intergenic |
TTTCTACTGGGTGCCCTGAC+AGG | 0.478432 | 3_1:+85547886 | None:intergenic |
AAATTTGACTAGTAAGATGA+AGG | 0.479707 | 3_1:-85552738 | Msa0382800:intron |
ATTTGGTGGAACTGGAGTTA+AGG | 0.481138 | 3_1:-85546761 | Msa0382800:three_prime_UTR |
TTCTTCCATCATATTATGAA+AGG | 0.484365 | 3_1:-85552206 | Msa0382800:CDS |
AAGCTGATCACCATCTTGAC+AGG | 0.485234 | 3_1:-85551028 | Msa0382800:intron |
CGTTAAAAGAATGGTCTTTG+AGG | 0.489222 | 3_1:-85552657 | Msa0382800:intron |
ATCTTCGAGCTCGGTAGCGT+GGG | 0.489627 | 3_1:+85547273 | None:intergenic |
ATGGTGATCGGCTTCTCCTT+CGG | 0.490001 | 3_1:+85547309 | None:intergenic |
GGGAGAACTCCTGCTCCGGC+GGG | 0.492496 | 3_1:+85548260 | None:intergenic |
AATTTCCGTGCATTATGTAC+AGG | 0.493844 | 3_1:-85552519 | Msa0382800:intron |
ACAGAAGACCTAGATTTCAC+TGG | 0.493926 | 3_1:+85547134 | None:intergenic |
GAGGGGCAGGAAGGGGAGAA+AGG | 0.494520 | 3_1:-85548343 | Msa0382800:CDS |
AGAGTATGAGTATTAGTCCT+AGG | 0.495161 | 3_1:-85548575 | Msa0382800:CDS |
AAAGGCATTCGTCGTACTCC+CGG | 0.498519 | 3_1:-85547166 | Msa0382800:CDS |
AATACTCATACTCTTACTCA+TGG | 0.498982 | 3_1:+85548584 | None:intergenic |
AGAGTTATTGCGGTATTTGG+TGG | 0.501527 | 3_1:-85546775 | Msa0382800:three_prime_UTR |
GGCTAAAGCATGATGGCCCT+GGG | 0.504941 | 3_1:-85551112 | Msa0382800:CDS |
GGTGTTCTTCTCCTACGTAC+AGG | 0.505441 | 3_1:+85547832 | None:intergenic |
GAGCGGCATAGCAATGGTAC+TGG | 0.505926 | 3_1:-85548784 | Msa0382800:CDS |
TGCCTTTCTACACGAGGAGA+GGG | 0.506956 | 3_1:+85547182 | None:intergenic |
CTTCAAAAGACAGAAGGAAA+AGG | 0.507312 | 3_1:-85550449 | Msa0382800:CDS |
ACCTCACAGGAGACCGGGAA+GGG | 0.507446 | 3_1:+85547701 | None:intergenic |
TTTGTTGCCTGCCATGTCCT+CGG | 0.508598 | 3_1:-85546727 | Msa0382800:three_prime_UTR |
AGCGAATGCGAACTGGGCTG+CGG | 0.509557 | 3_1:+85547240 | None:intergenic |
ATGGAAGAATTGATCGTGAC+AGG | 0.512263 | 3_1:-85547666 | Msa0382800:intron |
AAATGAACATCCATCACGTC+AGG | 0.512817 | 3_1:+85548724 | None:intergenic |
AACCCCGCCGTTAAAACCAC+TGG | 0.512962 | 3_1:-85553831 | Msa0382800:five_prime_UTR |
CTCCTTCCGATGCTTCTCCT+AGG | 0.513131 | 3_1:+85548372 | None:intergenic |
ATTCGTCGTACTCCCGGAGC+AGG | 0.513917 | 3_1:-85547160 | Msa0382800:CDS |
GTATTAGTCCTAGGAGGAGT+AGG | 0.516856 | 3_1:-85548566 | Msa0382800:CDS |
TTGAAGAAAATCGAAGATGT+TGG | 0.517732 | 3_1:-85550845 | Msa0382800:CDS |
TGCTCCGGCGGGATCTTACA+GGG | 0.517890 | 3_1:+85548271 | None:intergenic |
TAATCTTGAAACACGGAGGA+AGG | 0.518485 | 3_1:-85550487 | Msa0382800:CDS |
GACGTGATGGATGTTCATTT+GGG | 0.518530 | 3_1:-85548721 | Msa0382800:CDS |
CTCCTGTCCATGCTTCTGAC+AGG | 0.518835 | 3_1:+85548444 | None:intergenic |
TCCTTTCTATGATGAATGGT+GGG | 0.519261 | 3_1:+85548856 | None:intergenic |
GTGGACTTCTGAAACGCCTA+GGG | 0.519991 | 3_1:+85547534 | None:intergenic |
AGGGCCGTTTCCGAACCAAA+TGG | 0.520608 | 3_1:+85553936 | None:intergenic |
GATCAATTCTTCCATTGTAT+CGG | 0.521886 | 3_1:+85547674 | None:intergenic |
GGGCAAAATGGCAGTGCAGT+GGG | 0.522760 | 3_1:+85553889 | None:intergenic |
CTTCTCCTACGTACAGGGCT+AGG | 0.523768 | 3_1:+85547838 | None:intergenic |
CTGCGGCGATTATTTCTACT+GGG | 0.525700 | 3_1:+85547874 | None:intergenic |
TCTTTGGGAGGCTTGTTGAA+GGG | 0.527658 | 3_1:-85550877 | Msa0382800:CDS |
ATTGCCATTGACAAAAGCCC+AGG | 0.528592 | 3_1:+85551095 | None:intergenic |
CTCTTGCTCCTACTCCTCCT+AGG | 0.529950 | 3_1:+85548558 | None:intergenic |
CAACAGTACCCAAAACCATA+GGG | 0.531341 | 3_1:+85546979 | None:intergenic |
AAACCACTGGAAAACGCTGC+CGG | 0.532125 | 3_1:-85553818 | Msa0382800:five_prime_UTR |
CTTCCTACGACGAAGAAGTC+CGG | 0.532825 | 3_1:+85553799 | None:intergenic |
CGGACTTCTTCGTCGTAGGA+AGG | 0.535117 | 3_1:-85553798 | Msa0382800:five_prime_UTR |
GAAGCCCTCCTCGTCTATCA+AGG | 0.536306 | 3_1:-85548485 | Msa0382800:CDS |
ATTGCTGACCGTGATAAGCT+TGG | 0.537866 | 3_1:-85551074 | Msa0382800:CDS |
GCCCCTCTCCTCGTGTAGAA+AGG | 0.538337 | 3_1:-85547184 | Msa0382800:CDS |
AGGAGTCCTAGGAGAAGCAT+CGG | 0.541324 | 3_1:-85548378 | Msa0382800:CDS |
TTATGGATGTATCTATTGAT+GGG | 0.542854 | 3_1:-85552685 | Msa0382800:CDS |
GGTATGACCTCACAGGAGAC+CGG | 0.543083 | 3_1:+85547695 | None:intergenic |
GTTCTCCTGACTCGGGCCAA+AGG | 0.543507 | 3_1:-85547016 | Msa0382800:CDS |
GAATAGCAAACCTGTCAAGA+TGG | 0.543791 | 3_1:+85551018 | None:intergenic |
CGTGGGCTGGGCGAAACAGA+TGG | 0.544805 | 3_1:+85547290 | None:intergenic |
TTTCACTGGACTCCTGCTCC+GGG | 0.544930 | 3_1:+85547148 | None:intergenic |
TTCCTTTCTATGATGAATGG+TGG | 0.545350 | 3_1:+85548855 | None:intergenic |
GGCTAATGCTTCTCTTTGAG+GGG | 0.546019 | 3_1:+85547914 | None:intergenic |
AGGAGTCCTGTTAGGAGCAT+CGG | 0.546318 | 3_1:-85548426 | Msa0382800:CDS |
AAGAGAGGCTTGGTCTCATA+CGG | 0.546509 | 3_1:-85547044 | Msa0382800:CDS |
TAACTGTGGTGAATATAATG+AGG | 0.546907 | 3_1:-85550783 | Msa0382800:CDS |
GAGAGGGGCGAGATCGATCG+GGG | 0.548132 | 3_1:+85547198 | None:intergenic |
GAGAAGCATCGGAAGGAGCC+CGG | 0.548445 | 3_1:-85548367 | Msa0382800:CDS |
CACGAAAAGCAAGTAGAGAC+AGG | 0.548672 | 3_1:-85547097 | Msa0382800:CDS |
AGAAGCCCAGATGGAAAGAG+AGG | 0.548943 | 3_1:-85547059 | Msa0382800:CDS |
GTCCTGTCAGAAGCATGGAC+AGG | 0.549338 | 3_1:-85548446 | Msa0382800:CDS |
CAGTCTTGGGAGCAACATCA+TGG | 0.552540 | 3_1:+85552547 | None:intergenic |
GGTTCTATACCTTCTTGCAT+AGG | 0.552704 | 3_1:+85547723 | None:intergenic |
TCTTTCTTGACACTCTTACA+GGG | 0.552977 | 3_1:+85547998 | None:intergenic |
TCTTTCTTGACACTCTTACA+GGG | 0.552977 | 3_1:+85548169 | None:intergenic |
CATCGGAAGGAGCCCGGTGA+GGG | 0.553556 | 3_1:-85548361 | Msa0382800:CDS |
GTCCTCTTAAAAGTGTCAGC+AGG | 0.554156 | 3_1:-85548296 | Msa0382800:CDS |
TCATCATCCAGAAGCCCAGA+TGG | 0.554328 | 3_1:-85547068 | Msa0382800:CDS |
TGGAGCCTTTCATAATATGA+TGG | 0.555254 | 3_1:+85552201 | None:intergenic |
ACAACAGTACCCAAAACCAT+AGG | 0.556486 | 3_1:+85546978 | None:intergenic |
ACTGAAGTCTCCCTCACTTG+TGG | 0.558048 | 3_1:-85548890 | Msa0382800:CDS |
TGGGGATCCCGTTAAAAGAA+TGG | 0.559512 | 3_1:-85552666 | Msa0382800:CDS |
GTCCTGTTAGAAGCATTGAC+AGG | 0.559536 | 3_1:-85548398 | Msa0382800:CDS |
TGATTGTGCTACCGAGGACA+TGG | 0.559959 | 3_1:+85546716 | None:intergenic |
CTCTGGGAGAACTCCTGCTC+CGG | 0.560219 | 3_1:+85548256 | None:intergenic |
TTAAGAGGACGAGTTATCAC+AGG | 0.560252 | 3_1:+85548309 | None:intergenic |
GCTTAAGCAGAAGCTCTGGT+AGG | 0.561525 | 3_1:-85547939 | Msa0382800:CDS |
TAAGTTCATCTAGTGATGAC+AGG | 0.561778 | 3_1:-85550323 | Msa0382800:CDS |
AAGCGTATCAGAAGGGGAAG+AGG | 0.562233 | 3_1:-85547763 | Msa0382800:CDS |
GCGTTTCAGAAGTCCACCAC+GGG | 0.562455 | 3_1:-85547528 | Msa0382800:CDS |
TATCTTCGAGCTCGGTAGCG+TGG | 0.562882 | 3_1:+85547272 | None:intergenic |
CCCAGATGGAAAGAGAGGCT+TGG | 0.563233 | 3_1:-85547054 | Msa0382800:CDS |
GGTGGACTTCTGAAACGCCT+AGG | 0.563378 | 3_1:+85547533 | None:intergenic |
TGGGCGAAACAGATGGTGAT+CGG | 0.566190 | 3_1:+85547297 | None:intergenic |
GAAGATGTTGGTGATGATGA+AGG | 0.567541 | 3_1:-85550833 | Msa0382800:CDS |
GGAAAATTGCTTCACTACAA+GGG | 0.568821 | 3_1:-85552233 | Msa0382800:CDS |
GGGCCATCATGCTTTAGCCT+AGG | 0.569224 | 3_1:+85551116 | None:intergenic |
CATTCATCATAGAAAGGAAG+AGG | 0.571419 | 3_1:-85548851 | Msa0382800:CDS |
AACTGTGGTGAATATAATGA+GGG | 0.572121 | 3_1:-85550782 | Msa0382800:intron |
TCTAACTACTTTGTGATGCA+GGG | 0.573342 | 3_1:+85553868 | None:intergenic |
ACCCACCATTCATCATAGAA+AGG | 0.574695 | 3_1:-85548857 | Msa0382800:CDS |
TGCATCTTTCTCCACAAGTG+AGG | 0.574961 | 3_1:+85548879 | None:intergenic |
CTCTTTCGTGATGATACTCT+GGG | 0.576218 | 3_1:+85548240 | None:intergenic |
GTGTTCTTCTCCTACGTACA+GGG | 0.576951 | 3_1:+85547833 | None:intergenic |
GTATGACCTCACAGGAGACC+GGG | 0.578090 | 3_1:+85547696 | None:intergenic |
GGGGCAAAATGGCAGTGCAG+TGG | 0.582002 | 3_1:+85553888 | None:intergenic |
CATCATAGAAAGGAAGAGGC+GGG | 0.582172 | 3_1:-85548847 | Msa0382800:CDS |
TTCTGCTATATCTTCGAGCT+CGG | 0.582459 | 3_1:+85547264 | None:intergenic |
GTCCTGTTAGGAGCATCGGC+AGG | 0.583476 | 3_1:-85548422 | Msa0382800:CDS |
GGAGGAGTTCTTCCCCGTGG+TGG | 0.583960 | 3_1:+85547515 | None:intergenic |
GGAGGGCTTCTACTGACACT+TGG | 0.584847 | 3_1:+85548498 | None:intergenic |
TGTGCTACCGAGGACATGGC+AGG | 0.585311 | 3_1:+85546720 | None:intergenic |
CCTCACAGGAGACCGGGAAG+GGG | 0.586327 | 3_1:+85547702 | None:intergenic |
AATGGAGAGCGGCATAGCAA+TGG | 0.587650 | 3_1:-85548790 | Msa0382800:CDS |
CTTAAGCAGAAGCTCTGGTA+GGG | 0.588119 | 3_1:-85547938 | Msa0382800:CDS |
GGCTTGGTCTCATACGGCGA+TGG | 0.588268 | 3_1:-85547038 | Msa0382800:CDS |
TGAACTTATATCAGATGATG+AGG | 0.588716 | 3_1:+85550338 | None:intergenic |
CCCTGGTGGTAGAGTTATTG+CGG | 0.589657 | 3_1:-85546785 | Msa0382800:three_prime_UTR |
AATCTTGAAACACGGAGGAA+GGG | 0.590910 | 3_1:-85550486 | Msa0382800:CDS |
AACGATACTCCTATGCAAGA+AGG | 0.591467 | 3_1:-85547732 | Msa0382800:CDS |
AGAGGTCTTCAAAAGACAGA+AGG | 0.593982 | 3_1:-85550455 | Msa0382800:CDS |
GGAGGAGTAGGAGCAAGAGC+CGG | 0.594418 | 3_1:-85548554 | Msa0382800:CDS |
AAAACAAACTGTATAGGCAG+GGG | 0.596352 | 3_1:+85546614 | None:intergenic |
ATCGGAAGGAGCCCGGTGAG+GGG | 0.598010 | 3_1:-85548360 | Msa0382800:CDS |
CAGTAGTCCTGTCAGAAGCA+TGG | 0.598053 | 3_1:-85548451 | Msa0382800:CDS |
GTTACAGAAGGTATTCCCCT+AGG | 0.598322 | 3_1:-85547550 | Msa0382800:CDS |
CTTCGCCAAAGCGTATCAGA+AGG | 0.598505 | 3_1:-85547771 | Msa0382800:CDS |
GTGACAAAAGGCGAAGAAGA+CGG | 0.598727 | 3_1:-85550236 | Msa0382800:CDS |
GGAATATACTTAGGTACCGA+AGG | 0.599526 | 3_1:-85547325 | Msa0382800:intron |
ACCGCAATAACTCTACCACC+AGG | 0.600067 | 3_1:+85546784 | None:intergenic |
GCATCTTTCTCCACAAGTGA+GGG | 0.601008 | 3_1:+85548880 | None:intergenic |
AAATACCTGTACATAATGCA+CGG | 0.602204 | 3_1:+85552514 | None:intergenic |
GGCGATGGTTCTCCTGACTC+GGG | 0.602378 | 3_1:-85547023 | Msa0382800:CDS |
GGAGGAAGGGAAAGCTCAAG+AGG | 0.602515 | 3_1:-85550473 | Msa0382800:CDS |
GGAAAGGATGGAGCCTGTGA+AGG | 0.603085 | 3_1:-85550513 | Msa0382800:CDS |
ATGCCTTTCTACACGAGGAG+AGG | 0.606634 | 3_1:+85547181 | None:intergenic |
ATACTCATACTCTTACTCAT+GGG | 0.608612 | 3_1:+85548585 | None:intergenic |
TTCGCCAAAGCGTATCAGAA+GGG | 0.611595 | 3_1:-85547770 | Msa0382800:CDS |
AACTCTCTGATTCAGATGAG+TGG | 0.611686 | 3_1:+85550418 | None:intergenic |
TAGGAGAAGAACACCTCGTG+GGG | 0.611922 | 3_1:-85547824 | Msa0382800:CDS |
CCCCTTCCCGGTCTCCTGTG+AGG | 0.613263 | 3_1:-85547702 | Msa0382800:CDS |
TTGTATCGGTATGACCTCAC+AGG | 0.614073 | 3_1:+85547688 | None:intergenic |
TCACCTAGGCTAAAGCATGA+TGG | 0.615222 | 3_1:-85551119 | Msa0382800:CDS |
AGAGAGGCAGCCTGACGTGA+TGG | 0.616843 | 3_1:-85548734 | Msa0382800:CDS |
GTCCTAGGAGAAGCATCGGA+AGG | 0.617057 | 3_1:-85548374 | Msa0382800:CDS |
GCAGATATTCAAGTTACAGA+AGG | 0.617887 | 3_1:-85547562 | Msa0382800:intron |
GTGAGGTCATACCGATACAA+TGG | 0.621613 | 3_1:-85547685 | Msa0382800:CDS |
AATGAGAACCAAGCTTATCA+CGG | 0.622461 | 3_1:+85551066 | None:intergenic |
AGAGGGGCGAGATCGATCGG+GGG | 0.622482 | 3_1:+85547199 | None:intergenic |
CTCAAATGATTGTGCTACCG+AGG | 0.622491 | 3_1:+85546710 | None:intergenic |
TGGGTGCCCTGACAGGACTT+CGG | 0.626508 | 3_1:+85547893 | None:intergenic |
GCATCGGAAGGAGCCCGGTG+AGG | 0.628008 | 3_1:-85548362 | Msa0382800:CDS |
TCATCATAGAAAGGAAGAGG+CGG | 0.629322 | 3_1:-85548848 | Msa0382800:CDS |
GACCTCACAGGAGACCGGGA+AGG | 0.634812 | 3_1:+85547700 | None:intergenic |
GTCTACAAAGAAATAAAACA+TGG | 0.635400 | 3_1:+85546875 | None:intergenic |
GGAAATATATAGTCTTTGGG+AGG | 0.635579 | 3_1:-85550889 | Msa0382800:CDS |
CTGCCGGACTTCTTCGTCGT+AGG | 0.637165 | 3_1:-85553802 | Msa0382800:five_prime_UTR |
TCGCCAAAGCGTATCAGAAG+GGG | 0.637830 | 3_1:-85547769 | Msa0382800:CDS |
GGAGCCCTGTAAGATCCCGC+CGG | 0.639010 | 3_1:-85548275 | Msa0382800:CDS |
CATTAGCCGAAGTCCTGTCA+GGG | 0.640601 | 3_1:-85547899 | Msa0382800:CDS |
ATATTCTTACAGTTACCGGC+GGG | 0.641497 | 3_1:+85553772 | None:intergenic |
GATCTGACAGAAGTGAAGAG+AGG | 0.643642 | 3_1:-85548750 | Msa0382800:CDS |
TATGAAAGGCTCCATCGTGA+AGG | 0.643659 | 3_1:-85552192 | Msa0382800:intron |
GATATTCTTACAGTTACCGG+CGG | 0.648868 | 3_1:+85553771 | None:intergenic |
TCCTCCTTGATAGACGAGGA+GGG | 0.654272 | 3_1:+85548481 | None:intergenic |
TATGGATGTATCTATTGATG+GGG | 0.655483 | 3_1:-85552684 | Msa0382800:CDS |
CTCCTCCTTGATAGACGAGG+AGG | 0.656822 | 3_1:+85548480 | None:intergenic |
GAGTTCTTCAGATTCAGACA+TGG | 0.657506 | 3_1:-85550400 | Msa0382800:intron |
GTATGAGTATTAGTCCTAGG+AGG | 0.658103 | 3_1:-85548572 | Msa0382800:CDS |
CTAACTACTTTGTGATGCAG+GGG | 0.658344 | 3_1:+85553869 | None:intergenic |
AAGATGTTGGTGATGATGAA+GGG | 0.659428 | 3_1:-85550832 | Msa0382800:CDS |
CCAGCATTAAGCAAAGCAGA+AGG | 0.660521 | 3_1:+85546918 | None:intergenic |
TTGCCATTGACAAAAGCCCA+GGG | 0.664370 | 3_1:+85551096 | None:intergenic |
GGAGTCCTAGCCCTGTACGT+AGG | 0.664402 | 3_1:-85547843 | Msa0382800:CDS |
GGCGTTTCAGAAGTCCACCA+CGG | 0.667800 | 3_1:-85547529 | Msa0382800:CDS |
CACGGGGAAGAACTCCTCCA+AGG | 0.669190 | 3_1:-85547511 | Msa0382800:intron |
GTAGGAGAAGAACACCTCGT+GGG | 0.673039 | 3_1:-85547825 | Msa0382800:CDS |
GTCGTAGGAAGGAATCCCGC+CGG | 0.675111 | 3_1:-85553787 | Msa0382800:five_prime_UTR |
CTTGGAGGAGTTCTTCCCCG+TGG | 0.675788 | 3_1:+85547512 | None:intergenic |
GCCTTTCTACACGAGGAGAG+GGG | 0.676305 | 3_1:+85547183 | None:intergenic |
GTGAAATTAGGATATGTCCC+TGG | 0.680375 | 3_1:-85546802 | Msa0382800:three_prime_UTR |
AAAACAACATACCTTCACGA+TGG | 0.681325 | 3_1:+85552181 | None:intergenic |
ACTGTTAAAATTATTAACTG+TGG | 0.681914 | 3_1:-85550797 | Msa0382800:CDS |
AACAGTACCCAAAACCATAG+GGG | 0.683927 | 3_1:+85546980 | None:intergenic |
CGTAGGAGAAGAACACCTCG+TGG | 0.694022 | 3_1:-85547826 | Msa0382800:CDS |
AAACTCCTCCTTGATAGACG+AGG | 0.696905 | 3_1:+85548477 | None:intergenic |
CTGTAAAGGAAAATGGAGAG+CGG | 0.699194 | 3_1:-85548801 | Msa0382800:CDS |
GCCCTCCTCGTCTATCAAGG+AGG | 0.713771 | 3_1:-85548482 | Msa0382800:CDS |
GCAATAATCTTGAAACACGG+AGG | 0.719606 | 3_1:-85550491 | Msa0382800:CDS |
AAGAAAGATAAATATAAACG+TGG | 0.721369 | 3_1:-85550279 | Msa0382800:CDS |
AAGGCAATAATCTTGAAACA+CGG | 0.721762 | 3_1:-85550494 | Msa0382800:CDS |
GATACATCCATAAACACCAG+CGG | 0.727051 | 3_1:+85552695 | None:intergenic |
GACGAATGCCTTTCTACACG+AGG | 0.728186 | 3_1:+85547176 | None:intergenic |
TAGGACTCCTAGAATAACTG+CGG | 0.729288 | 3_1:+85547857 | None:intergenic |
CCGCAATAACTCTACCACCA+GGG | 0.732104 | 3_1:+85546785 | None:intergenic |
AGGAGAAGAACACCTCGTGG+GGG | 0.741980 | 3_1:-85547823 | Msa0382800:CDS |
CGTTTCAGAAGTCCACCACG+GGG | 0.742381 | 3_1:-85547527 | Msa0382800:CDS |
TGGACTTCTGAAACGCCTAG+GGG | 0.751220 | 3_1:+85547535 | None:intergenic |
AAATTAGGATATGTCCCTGG+TGG | 0.767271 | 3_1:-85546799 | Msa0382800:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTCATTTAAATTAATCTAA+GGG | + | chr3_1:85547623-85547642 | None:intergenic | 10.0% |
!! | ATATATTGAAAAATAAAGAA+TGG | + | chr3_1:85549987-85550006 | None:intergenic | 10.0% |
!! | ATTCATTCTAATTAATCTAA+GGG | + | chr3_1:85547482-85547501 | None:intergenic | 15.0% |
!! | CATTCATTTAAATTAATCTA+AGG | + | chr3_1:85547624-85547643 | None:intergenic | 15.0% |
!! | CTTAGATTAATTTAAATGAA+TGG | - | chr3_1:85547622-85547641 | Msa0382800:intron | 15.0% |
!! | ATTAATTTAAATGAATGGAT+AGG | - | chr3_1:85547627-85547646 | Msa0382800:intron | 15.0% |
!! | ATCAAATAATAAAAACACAA+AGG | + | chr3_1:85548870-85548889 | None:intergenic | 15.0% |
!!! | TTTGATTTGATTTAGAAATT+TGG | - | chr3_1:85549041-85549060 | Msa0382800:intron | 15.0% |
!! | CTTTCAAAAATATAAAAGTA+TGG | + | chr3_1:85549138-85549157 | None:intergenic | 15.0% |
!!! | TTTGCTATTCTAATATTTTT+TGG | - | chr3_1:85549579-85549598 | Msa0382800:intron | 15.0% |
!! | AATATGAATATTCAAATGAA+GGG | + | chr3_1:85550017-85550036 | None:intergenic | 15.0% |
!! | AAATATGAATATTCAAATGA+AGG | + | chr3_1:85550018-85550037 | None:intergenic | 15.0% |
!! | AACCAATTTCATATAATTAA+AGG | + | chr3_1:85551062-85551081 | None:intergenic | 15.0% |
!! | AAAAAGTAAAAAACTGAATA+AGG | + | chr3_1:85551161-85551180 | None:intergenic | 15.0% |
!!! | TTTTATTGAAAGAAAATTAC+GGG | + | chr3_1:85551573-85551592 | None:intergenic | 15.0% |
!!! | GTTTTATTGAAAGAAAATTA+CGG | + | chr3_1:85551574-85551593 | None:intergenic | 15.0% |
!!! | TTTTTTATAAGTGAAAGAAA+TGG | + | chr3_1:85551943-85551962 | None:intergenic | 15.0% |
!! | ATAATTAAAAATATGGTTCA+AGG | + | chr3_1:85553210-85553229 | None:intergenic | 15.0% |
!! | GCTATCAATAATTAAAAATA+TGG | + | chr3_1:85553217-85553236 | None:intergenic | 15.0% |
!! | GTATATTCCAAATAATTATA+TGG | + | chr3_1:85553248-85553267 | None:intergenic | 15.0% |
!!! | TAATTATTTGGAATATACTT+AGG | - | chr3_1:85553250-85553269 | Msa0382800:intron | 15.0% |
!!! | GAGTTGAATTTATAAAATTT+TGG | - | chr3_1:85553894-85553913 | Msa0382800:five_prime_UTR | 15.0% |
!!! | GTTCATTTTAATTAATCCAA+GGG | + | chr3_1:85547335-85547354 | None:intergenic | 20.0% |
!! | CTTGGATTAATTAAAATGAA+CGG | - | chr3_1:85547334-85547353 | Msa0382800:intron | 20.0% |
!!! | TGATTTTACTTAAAATCATC+AGG | + | chr3_1:85547453-85547472 | None:intergenic | 20.0% |
!! | CATTCATTCTAATTAATCTA+AGG | + | chr3_1:85547483-85547502 | None:intergenic | 20.0% |
!! | CTTAGATTAATTAGAATGAA+TGG | - | chr3_1:85547481-85547500 | Msa0382800:intron | 20.0% |
!!! | CTGTTTTAATATTTGTATCT+CGG | - | chr3_1:85547735-85547754 | Msa0382800:CDS | 20.0% |
!!! | TTTCTTGTGATATAGTTTTA+AGG | - | chr3_1:85548562-85548581 | Msa0382800:CDS | 20.0% |
!!! | TGATGTTTTTACTTTTATAC+AGG | - | chr3_1:85548725-85548744 | Msa0382800:CDS | 20.0% |
!!! | GATGTTTTTACTTTTATACA+GGG | - | chr3_1:85548726-85548745 | Msa0382800:CDS | 20.0% |
!!! | AATTTCTTTTCTAAGTCAAT+TGG | - | chr3_1:85548948-85548967 | Msa0382800:intron | 20.0% |
!!! | ATTTCTTTTCTAAGTCAATT+GGG | - | chr3_1:85548949-85548968 | Msa0382800:intron | 20.0% |
!!! | ATTTGGATTAGTTTTGATAT+TGG | - | chr3_1:85549058-85549077 | Msa0382800:intron | 20.0% |
!!! | TGATTAAATACCAAATCTTT+TGG | - | chr3_1:85549168-85549187 | Msa0382800:CDS | 20.0% |
!!! | GATTAAATACCAAATCTTTT+GGG | - | chr3_1:85549169-85549188 | Msa0382800:CDS | 20.0% |
!! | AAAAGAAAACAACAAATCAA+GGG | + | chr3_1:85549254-85549273 | None:intergenic | 20.0% |
!! | AAAAAGAAAACAACAAATCA+AGG | + | chr3_1:85549255-85549274 | None:intergenic | 20.0% |
!!! | GATTTTATATTTTGTTTGTG+AGG | - | chr3_1:85549623-85549642 | Msa0382800:intron | 20.0% |
!!! | ATAATTTTAACAGTTACAGT+TGG | + | chr3_1:85549781-85549800 | None:intergenic | 20.0% |
!! | ACTGTTAAAATTATTAACTG+TGG | - | chr3_1:85549787-85549806 | Msa0382800:intron | 20.0% |
!! | ATATGAATATTCAAATGAAG+GGG | + | chr3_1:85550016-85550035 | None:intergenic | 20.0% |
!!! | TGAATATTCATATTTTCAGA+TGG | - | chr3_1:85550023-85550042 | Msa0382800:intron | 20.0% |
!!! | GAATATTCATATTTTCAGAT+GGG | - | chr3_1:85550024-85550043 | Msa0382800:intron | 20.0% |
!! | AAGGTAAATAAATCAAAAAC+AGG | - | chr3_1:85550050-85550069 | Msa0382800:intron | 20.0% |
!! | AAATAAATCAAAAACAGGAA+AGG | - | chr3_1:85550055-85550074 | Msa0382800:intron | 20.0% |
!! | ACGTTTATATTTATCTTTCT+TGG | + | chr3_1:85550306-85550325 | None:intergenic | 20.0% |
!! | AAGAAAGATAAATATAAACG+TGG | - | chr3_1:85550305-85550324 | Msa0382800:CDS | 20.0% |
!! | AAAGATAAATTACTGAAATC+TGG | + | chr3_1:85550452-85550471 | None:intergenic | 20.0% |
!! | AGCCTTTAATTATATGAAAT+TGG | - | chr3_1:85551057-85551076 | Msa0382800:CDS | 20.0% |
!!! | TTACAGTTAGAATTTTTTGA+TGG | - | chr3_1:85551209-85551228 | Msa0382800:intron | 20.0% |
!! | AACCAAAAAGAAAAACATTT+AGG | + | chr3_1:85551615-85551634 | None:intergenic | 20.0% |
!! | CTTATAAAAAATTAATGAGC+AGG | - | chr3_1:85551952-85551971 | Msa0382800:intron | 20.0% |
!!! | TAGATTTTATAGTTGAATGA+TGG | - | chr3_1:85552983-85553002 | Msa0382800:intron | 20.0% |
!! | TTCAAAAAAACAAACTGTAT+AGG | + | chr3_1:85553979-85553998 | None:intergenic | 20.0% |
! | TTTCACAAAGTGTAATAAGT+TGG | + | chr3_1:85546586-85546605 | None:intergenic | 25.0% |
!!! | TTTGATGTTTAGGGTTTTAA+GGG | + | chr3_1:85546670-85546689 | None:intergenic | 25.0% |
!!! | ATTTGATGTTTAGGGTTTTA+AGG | + | chr3_1:85546671-85546690 | None:intergenic | 25.0% |
! | AAACGAAATACTTAAAACAC+AGG | + | chr3_1:85547170-85547189 | None:intergenic | 25.0% |
!! | CATTGATTGTTGAATTTGTT+AGG | - | chr3_1:85547235-85547254 | Msa0382800:CDS | 25.0% |
!!! | CGTTCATTTTAATTAATCCA+AGG | + | chr3_1:85547336-85547355 | None:intergenic | 25.0% |
!! | TTTTACTTAAAATCATCAGG+TGG | + | chr3_1:85547450-85547469 | None:intergenic | 25.0% |
! | TTTAAATTAATCTAAGGGCT+TGG | + | chr3_1:85547618-85547637 | None:intergenic | 25.0% |
! | TTAAATGAATGGATAGGATT+TGG | - | chr3_1:85547633-85547652 | Msa0382800:intron | 25.0% |
! | AAATTTGACTAGTAAGATGA+AGG | - | chr3_1:85547846-85547865 | Msa0382800:CDS | 25.0% |
! | TTTATGGATGTATCTATTGA+TGG | - | chr3_1:85547898-85547917 | Msa0382800:CDS | 25.0% |
! | TTATGGATGTATCTATTGAT+GGG | - | chr3_1:85547899-85547918 | Msa0382800:CDS | 25.0% |
! | ATAAACAATATTTGCATGGA+TGG | + | chr3_1:85548210-85548229 | None:intergenic | 25.0% |
! | AAGCATAAACAATATTTGCA+TGG | + | chr3_1:85548214-85548233 | None:intergenic | 25.0% |
!! | GCAAATATTGTTTATGCTTT+TGG | - | chr3_1:85548215-85548234 | Msa0382800:CDS | 25.0% |
! | TTCTTCCATCATATTATGAA+AGG | - | chr3_1:85548378-85548397 | Msa0382800:CDS | 25.0% |
! | CTGTCGAAAAATTTAGATTT+AGG | + | chr3_1:85548436-85548455 | None:intergenic | 25.0% |
! | AAATTGCAACCATCAAAAAA+TGG | + | chr3_1:85548825-85548844 | None:intergenic | 25.0% |
!! | AGATTTGGTATTTAATCAAC+TGG | + | chr3_1:85549166-85549185 | None:intergenic | 25.0% |
!! | TTTCGTAAATTTTACTGTCA+TGG | - | chr3_1:85549194-85549213 | Msa0382800:intron | 25.0% |
!! | ATAGACGAGTTGAAAATTAA+TGG | + | chr3_1:85549285-85549304 | None:intergenic | 25.0% |
!!! | ATTAACGTGGTTTGTATTTT+TGG | - | chr3_1:85549427-85549446 | Msa0382800:intron | 25.0% |
!!! | GCTATTCTAATATTTTTTGG+TGG | - | chr3_1:85549582-85549601 | Msa0382800:intron | 25.0% |
! | GGTTAATTGGAATTCATATT+AGG | + | chr3_1:85549868-85549887 | None:intergenic | 25.0% |
! | AATCTGTACATAATAACAGA+AGG | + | chr3_1:85550429-85550448 | None:intergenic | 25.0% |
! | AACCATACTCATATAACTAA+AGG | + | chr3_1:85550565-85550584 | None:intergenic | 25.0% |
! | TATTGTGGAGATTCTTTATT+CGG | - | chr3_1:85550648-85550667 | Msa0382800:intron | 25.0% |
! | TTCTAACTGTTAAAAATGCA+TGG | + | chr3_1:85550704-85550723 | None:intergenic | 25.0% |
! | TAACAGTTAGAATTCTTTGA+TGG | - | chr3_1:85550712-85550731 | Msa0382800:intron | 25.0% |
!!! | AAGCATGACTAGTTTTTTTT+AGG | + | chr3_1:85550921-85550940 | None:intergenic | 25.0% |
! | AAAAAAACTAGTCATGCTTA+AGG | - | chr3_1:85550922-85550941 | Msa0382800:intron | 25.0% |
! | TTGGTACAGAAAAATACATA+TGG | + | chr3_1:85550592-85550611 | None:intergenic | 25.0% |
! | TCTAACTGTAAAAAATGCAA+GGG | + | chr3_1:85551200-85551219 | None:intergenic | 25.0% |
! | TTCTAACTGTAAAAAATGCA+AGG | + | chr3_1:85551201-85551220 | None:intergenic | 25.0% |
! | CATACAAAATGGTAATTGAA+AGG | + | chr3_1:85551274-85551293 | None:intergenic | 25.0% |
!!! | GAAAAGATGTATTTTAAGCA+TGG | + | chr3_1:85551362-85551381 | None:intergenic | 25.0% |
!! | GCTTAAAATACATCTTTTCA+AGG | - | chr3_1:85551363-85551382 | Msa0382800:intron | 25.0% |
! | AAAGATCGTTATCAGAAAAA+AGG | - | chr3_1:85551499-85551518 | Msa0382800:intron | 25.0% |
!! | CTCCTAAATGTTTTTCTTTT+TGG | - | chr3_1:85551610-85551629 | Msa0382800:intron | 25.0% |
! | GAAAAAACTGTAAAGGAAAA+TGG | - | chr3_1:85551776-85551795 | Msa0382800:intron | 25.0% |
! | GTAAGCAGAATAAATAACTA+AGG | + | chr3_1:85551921-85551940 | None:intergenic | 25.0% |
!! | CTTTTTCTCAATCTTCTTTT+TGG | + | chr3_1:85552065-85552084 | None:intergenic | 25.0% |
! | AAAGAGGAAAAAAAAAACCT+TGG | + | chr3_1:85553093-85553112 | None:intergenic | 25.0% |
! | AGTAATTGTCATAAGTAAAG+AGG | + | chr3_1:85553109-85553128 | None:intergenic | 25.0% |
! | GTTGAGTCCATATAATTATT+TGG | - | chr3_1:85553238-85553257 | Msa0382800:intron | 25.0% |
! | AGAAATAAAACATGGCATAT+TGG | + | chr3_1:85553704-85553723 | None:intergenic | 25.0% |
! | GTCTACAAAGAAATAAAACA+TGG | + | chr3_1:85553712-85553731 | None:intergenic | 25.0% |
!!! | AGTTGATTTCAAATTTTCAG+AGG | + | chr3_1:85553949-85553968 | None:intergenic | 25.0% |
!! | ACAAAGTGTAATAAGTTGGT+TGG | + | chr3_1:85546582-85546601 | None:intergenic | 30.0% |
GGAAGAAAAGGATAAAGAAA+AGG | + | chr3_1:85546847-85546866 | None:intergenic | 30.0% | |
! | CATTGATTGTGGAATTTGTT+AGG | - | chr3_1:85547525-85547544 | Msa0382800:CDS | 30.0% |
ATGATAACTCTGGTACATTA+TGG | - | chr3_1:85547698-85547717 | Msa0382800:CDS | 30.0% | |
GAAACCAGTACAATACAATT+GGG | + | chr3_1:85547762-85547781 | None:intergenic | 30.0% | |
AAAATGTATCAGCAAGAAAG+CGG | + | chr3_1:85547798-85547817 | None:intergenic | 30.0% | |
TATGGATGTATCTATTGATG+GGG | - | chr3_1:85547900-85547919 | Msa0382800:CDS | 30.0% | |
! | TCAAAGACCATTCTTTTAAC+GGG | + | chr3_1:85547928-85547947 | None:intergenic | 30.0% |
! | CTCAAAGACCATTCTTTTAA+CGG | + | chr3_1:85547929-85547948 | None:intergenic | 30.0% |
AAATACCTGTACATAATGCA+CGG | + | chr3_1:85548073-85548092 | None:intergenic | 30.0% | |
!! | CTTTTGAAAGCAAAAAGGAA+TGG | + | chr3_1:85548118-85548137 | None:intergenic | 30.0% |
CAATTTGTCTACCTATTGAA+CGG | - | chr3_1:85548259-85548278 | Msa0382800:CDS | 30.0% | |
GAAAACAATCAATCACAGAA+AGG | + | chr3_1:85548303-85548322 | None:intergenic | 30.0% | |
! | TTCTGTGATTGATTGTTTTC+AGG | - | chr3_1:85548303-85548322 | Msa0382800:CDS | 30.0% |
!!! | TGAAGGTATGTTGTTTTATC+TGG | - | chr3_1:85548409-85548428 | Msa0382800:CDS | 30.0% |
AGCTTATTAGAGTATGATGA+TGG | + | chr3_1:85548648-85548667 | None:intergenic | 30.0% | |
TCATACTCTAATAAGCTTCT+TGG | - | chr3_1:85548651-85548670 | Msa0382800:intron | 30.0% | |
TACAATAATGCATACAGACT+GGG | + | chr3_1:85548685-85548704 | None:intergenic | 30.0% | |
!! | GTTTTTACTTTTATACAGGG+TGG | - | chr3_1:85548729-85548748 | Msa0382800:CDS | 30.0% |
TCCTTTACTTGAACACAAAT+TGG | - | chr3_1:85548989-85549008 | Msa0382800:intron | 30.0% | |
! | AGTTGAAAATTAATGGACAC+AGG | + | chr3_1:85549278-85549297 | None:intergenic | 30.0% |
ATATATGGTTCAAACTTTCC+TGG | - | chr3_1:85549337-85549356 | Msa0382800:intron | 30.0% | |
TTTCTATCTCAACATTAACG+TGG | - | chr3_1:85549414-85549433 | Msa0382800:intron | 30.0% | |
TGCAGGAAATATATAGTCTT+TGG | - | chr3_1:85549691-85549710 | Msa0382800:intron | 30.0% | |
GCAGGAAATATATAGTCTTT+GGG | - | chr3_1:85549692-85549711 | Msa0382800:intron | 30.0% | |
TTGAAGAAAATCGAAGATGT+TGG | - | chr3_1:85549739-85549758 | Msa0382800:intron | 30.0% | |
TAACTGTGGTGAATATAATG+AGG | - | chr3_1:85549801-85549820 | Msa0382800:intron | 30.0% | |
AACTGTGGTGAATATAATGA+GGG | - | chr3_1:85549802-85549821 | Msa0382800:intron | 30.0% | |
! | TTTTCGGAATGTAGGTTAAT+TGG | + | chr3_1:85549881-85549900 | None:intergenic | 30.0% |
AAACTGTGCAATTAAAGAGT+TGG | + | chr3_1:85549912-85549931 | None:intergenic | 30.0% | |
! | TATTTTCCCTCTTCAATTGA+AGG | - | chr3_1:85549947-85549966 | Msa0382800:intron | 30.0% |
AAATCAAAAACAGGAAAGGA+TGG | - | chr3_1:85550059-85550078 | Msa0382800:intron | 30.0% | |
AAGGCAATAATCTTGAAACA+CGG | - | chr3_1:85550090-85550109 | Msa0382800:intron | 30.0% | |
TGAACTTATATCAGATGATG+AGG | + | chr3_1:85550249-85550268 | None:intergenic | 30.0% | |
! | GATGAATGTATTTTCATGCA+TGG | - | chr3_1:85550477-85550496 | Msa0382800:CDS | 30.0% |
CGTATAAATATGCACTACAT+CGG | + | chr3_1:85550532-85550551 | None:intergenic | 30.0% | |
AGCCTTTAGTTATATGAGTA+TGG | - | chr3_1:85550560-85550579 | Msa0382800:intron | 30.0% | |
AAAGTACATGACAAGAGAAT+TGG | + | chr3_1:85550611-85550630 | None:intergenic | 30.0% | |
TGTACTTTGTATGCATTGAA+TGG | - | chr3_1:85550623-85550642 | Msa0382800:intron | 30.0% | |
TCCTTTCAACTTACAATCTT+GGG | - | chr3_1:85550774-85550793 | Msa0382800:intron | 30.0% | |
!!! | TTTTAATTTGCGGTGTATTC+AGG | - | chr3_1:85550823-85550842 | Msa0382800:CDS | 30.0% |
!!! | TACTGCAGGTCATATTTTTT+TGG | - | chr3_1:85550966-85550985 | Msa0382800:intron | 30.0% |
!!! | ACTGCAGGTCATATTTTTTT+GGG | - | chr3_1:85550967-85550986 | Msa0382800:intron | 30.0% |
!!! | GTCATATTTTTTTGGGAATC+TGG | - | chr3_1:85550974-85550993 | Msa0382800:intron | 30.0% |
TGTATAAATATGCACAGCAT+GGG | + | chr3_1:85551029-85551048 | None:intergenic | 30.0% | |
TTGTATAAATATGCACAGCA+TGG | + | chr3_1:85551030-85551049 | None:intergenic | 30.0% | |
! | TTTTTCTGTACCAATTCTCT+TGG | - | chr3_1:85550598-85550617 | Msa0382800:intron | 30.0% |
ACAAAATGGTAATTGAAAGG+AGG | + | chr3_1:85551271-85551290 | None:intergenic | 30.0% | |
GTACAACAAATTAATCAACC+AGG | + | chr3_1:85551297-85551316 | None:intergenic | 30.0% | |
!!! | TTAAGCATGGCTAGTTTTTT+TGG | + | chr3_1:85551349-85551368 | None:intergenic | 30.0% |
!!! | ACTGAATGTCATACTTTTTC+AGG | - | chr3_1:85551392-85551411 | Msa0382800:intron | 30.0% |
!!! | CTGAATGTCATACTTTTTCA+GGG | - | chr3_1:85551393-85551412 | Msa0382800:intron | 30.0% |
GAGCAATGAAAAAACTGTAA+AGG | - | chr3_1:85551769-85551788 | Msa0382800:intron | 30.0% | |
ATACTCATACTCTTACTCAT+GGG | + | chr3_1:85552002-85552021 | None:intergenic | 30.0% | |
AATACTCATACTCTTACTCA+TGG | + | chr3_1:85552003-85552022 | None:intergenic | 30.0% | |
! | TTTTTCTTGACACTCTTACA+GGG | + | chr3_1:85552490-85552509 | None:intergenic | 30.0% |
!!! | TTTTTTCTTGACACTCTTAC+AGG | + | chr3_1:85552491-85552510 | None:intergenic | 30.0% |
GATCAATTCTTCCATTGTAT+CGG | + | chr3_1:85552913-85552932 | None:intergenic | 30.0% | |
AAATCTAAATACCAGCAGAA+AGG | + | chr3_1:85552970-85552989 | None:intergenic | 30.0% | |
TTCTGTAACTTGAATATCTG+CGG | + | chr3_1:85553023-85553042 | None:intergenic | 30.0% | |
! | TTTTTGCTGCATAACTTATG+TGG | - | chr3_1:85553167-85553186 | Msa0382800:intron | 30.0% |
AAGACAGTACTTGTGAAATT+AGG | - | chr3_1:85553770-85553789 | Msa0382800:intron | 30.0% | |
AAAAACAAACTGTATAGGCA+GGG | + | chr3_1:85553974-85553993 | None:intergenic | 30.0% | |
AAAAAACAAACTGTATAGGC+AGG | + | chr3_1:85553975-85553994 | None:intergenic | 30.0% | |
TGGGTGAGATTTGATGTTTA+GGG | + | chr3_1:85546679-85546698 | None:intergenic | 35.0% | |
TCTAACTACTTTGTGATGCA+GGG | + | chr3_1:85546719-85546738 | None:intergenic | 35.0% | |
GTGGATATTCTTACAGTTAC+CGG | + | chr3_1:85546819-85546838 | None:intergenic | 35.0% | |
GGATAAAGAAAAGGAAAGAG+TGG | + | chr3_1:85546838-85546857 | None:intergenic | 35.0% | |
GAAGGAAAATCTGGAAGAAA+AGG | + | chr3_1:85546859-85546878 | None:intergenic | 35.0% | |
AGAGTTATCATCAATGAGTC+AGG | + | chr3_1:85547689-85547708 | None:intergenic | 35.0% | |
! | TGACTCATTGATGATAACTC+TGG | - | chr3_1:85547688-85547707 | Msa0382800:CDS | 35.0% |
GGAAACCAGTACAATACAAT+TGG | + | chr3_1:85547763-85547782 | None:intergenic | 35.0% | |
CGTTAAAAGAATGGTCTTTG+AGG | - | chr3_1:85547927-85547946 | Msa0382800:CDS | 35.0% | |
AATTTCCGTGCATTATGTAC+AGG | - | chr3_1:85548065-85548084 | Msa0382800:CDS | 35.0% | |
!! | GGCAACTTTTGAAAGCAAAA+AGG | + | chr3_1:85548123-85548142 | None:intergenic | 35.0% |
!! | TTATGCTTTTGGTTGCAAGT+TGG | - | chr3_1:85548226-85548245 | Msa0382800:CDS | 35.0% |
ACAATCAATCACAGAAAGGT+GGG | + | chr3_1:85548299-85548318 | None:intergenic | 35.0% | |
AACAATCAATCACAGAAAGG+TGG | + | chr3_1:85548300-85548319 | None:intergenic | 35.0% | |
!! | AGAGGTATCAGTTCAAATAC+TGG | - | chr3_1:85548330-85548349 | Msa0382800:CDS | 35.0% |
TGGAAAATTGCTTCACTACA+AGG | - | chr3_1:85548350-85548369 | Msa0382800:CDS | 35.0% | |
GGAAAATTGCTTCACTACAA+GGG | - | chr3_1:85548351-85548370 | Msa0382800:CDS | 35.0% | |
TGGAGCCTTTCATAATATGA+TGG | + | chr3_1:85548386-85548405 | None:intergenic | 35.0% | |
AAAACAACATACCTTCACGA+TGG | + | chr3_1:85548406-85548425 | None:intergenic | 35.0% | |
CTATATATGCCCTTTCATTG+TGG | - | chr3_1:85548461-85548480 | Msa0382800:CDS | 35.0% | |
CATGTTCAACCACAATGAAA+GGG | + | chr3_1:85548473-85548492 | None:intergenic | 35.0% | |
TACAGCATAAACAAGGGTAA+TGG | + | chr3_1:85548512-85548531 | None:intergenic | 35.0% | |
! | ATTACCCTTGTTTATGCTGT+AGG | - | chr3_1:85548511-85548530 | Msa0382800:CDS | 35.0% |
GTATCCTACAGCATAAACAA+GGG | + | chr3_1:85548518-85548537 | None:intergenic | 35.0% | |
TGTATCCTACAGCATAAACA+AGG | + | chr3_1:85548519-85548538 | None:intergenic | 35.0% | |
TTTATGCTGTAGGATACACA+GGG | - | chr3_1:85548521-85548540 | Msa0382800:CDS | 35.0% | |
GTACAATAATGCATACAGAC+TGG | + | chr3_1:85548686-85548705 | None:intergenic | 35.0% | |
! | GGTGATTTTGTCAATCGTAA+TGG | - | chr3_1:85548750-85548769 | Msa0382800:CDS | 35.0% |
AATGGACAGCAAACTAGTAA+TGG | + | chr3_1:85548807-85548826 | None:intergenic | 35.0% | |
!!! | GTTTGCTGTCCATTTTTTGA+TGG | - | chr3_1:85548813-85548832 | Msa0382800:CDS | 35.0% |
AAAGAAATTACCATCGTCAC+AGG | + | chr3_1:85548937-85548956 | None:intergenic | 35.0% | |
GCCAATTTGTGTTCAAGTAA+AGG | + | chr3_1:85548993-85549012 | None:intergenic | 35.0% | |
TACGAAACACCCAAAAGATT+TGG | + | chr3_1:85549181-85549200 | None:intergenic | 35.0% | |
AAGAACGTATTATTCCTACC+AGG | + | chr3_1:85549358-85549377 | None:intergenic | 35.0% | |
! | GCACTTTCTAGTATGATGTT+GGG | + | chr3_1:85549383-85549402 | None:intergenic | 35.0% |
! | AGCACTTTCTAGTATGATGT+TGG | + | chr3_1:85549384-85549403 | None:intergenic | 35.0% |
!!! | TTATTTTAGACGAGTCACCT+AGG | - | chr3_1:85549451-85549470 | Msa0382800:intron | 35.0% |
AATGAGAACCAAGCTTATCA+CGG | + | chr3_1:85549521-85549540 | None:intergenic | 35.0% | |
! | GTGGCATTTTACTTCTTTCT+CGG | - | chr3_1:85549601-85549620 | Msa0382800:intron | 35.0% |
GGAAATATATAGTCTTTGGG+AGG | - | chr3_1:85549695-85549714 | Msa0382800:intron | 35.0% | |
!! | AAGATGTTGGTGATGATGAA+GGG | - | chr3_1:85549752-85549771 | Msa0382800:intron | 35.0% |
TGGTGAATATAATGAGGGTA+TGG | - | chr3_1:85549807-85549826 | Msa0382800:intron | 35.0% | |
! | AGACTGAATTTTCGGAATGT+AGG | + | chr3_1:85549889-85549908 | None:intergenic | 35.0% |
! | AGAGTTGGAGACTGAATTTT+CGG | + | chr3_1:85549897-85549916 | None:intergenic | 35.0% |
! | CATATTTTCAGATGGGAAGA+AGG | - | chr3_1:85550031-85550050 | Msa0382800:intron | 35.0% |
TTCAAGATTATTGCCTTCAC+AGG | + | chr3_1:85550087-85550106 | None:intergenic | 35.0% | |
CTTCAAAAGACAGAAGGAAA+AGG | - | chr3_1:85550135-85550154 | Msa0382800:intron | 35.0% | |
AGATTCAGACATGGAATCTT+CGG | - | chr3_1:85550193-85550212 | Msa0382800:intron | 35.0% | |
TAAGTTCATCTAGTGATGAC+AGG | - | chr3_1:85550261-85550280 | Msa0382800:CDS | 35.0% | |
TCATGCATGGTAATACACAA+TGG | - | chr3_1:85550490-85550509 | Msa0382800:CDS | 35.0% | |
ATGGTAATACACAATGGTAG+AGG | - | chr3_1:85550496-85550515 | Msa0382800:CDS | 35.0% | |
TAATACACAATGGTAGAGGT+AGG | - | chr3_1:85550500-85550519 | Msa0382800:CDS | 35.0% | |
ATGCATTGAATGGTCTATTG+TGG | - | chr3_1:85550633-85550652 | Msa0382800:intron | 35.0% | |
! | CAAGATTGTAAGTTGAAAGG+AGG | + | chr3_1:85550775-85550794 | None:intergenic | 35.0% |
CTCCTTTCAACTTACAATCT+TGG | - | chr3_1:85550773-85550792 | Msa0382800:intron | 35.0% | |
! | ACCCAAGATTGTAAGTTGAA+AGG | + | chr3_1:85550778-85550797 | None:intergenic | 35.0% |
!!! | GCGATGGTCATTTTAATTTG+CGG | - | chr3_1:85550813-85550832 | Msa0382800:CDS | 35.0% |
! | CTTAAGGACACATCTTTTCA+AGG | - | chr3_1:85550938-85550957 | Msa0382800:intron | 35.0% |
! | CAATTACCATTTTGTATGCC+TGG | - | chr3_1:85551276-85551295 | Msa0382800:intron | 35.0% |
AATCAACCAGGCATACAAAA+TGG | + | chr3_1:85551285-85551304 | None:intergenic | 35.0% | |
!!! | TCATACTTTTTCAGGGAATC+TGG | - | chr3_1:85551400-85551419 | Msa0382800:intron | 35.0% |
TGAAAGTCTTGATACTCAAC+AGG | - | chr3_1:85551462-85551481 | Msa0382800:intron | 35.0% | |
AGTTCAGCTGGACATAAAAA+AGG | + | chr3_1:85551677-85551696 | None:intergenic | 35.0% | |
TCCTTTCTATGATGAATGGT+GGG | + | chr3_1:85551731-85551750 | None:intergenic | 35.0% | |
TTCCTTTCTATGATGAATGG+TGG | + | chr3_1:85551732-85551751 | None:intergenic | 35.0% | |
CTCTTCCTTTCTATGATGAA+TGG | + | chr3_1:85551735-85551754 | None:intergenic | 35.0% | |
CATTCATCATAGAAAGGAAG+AGG | - | chr3_1:85551733-85551752 | Msa0382800:intron | 35.0% | |
TTCACTTCTGTCAGATCTAT+AGG | + | chr3_1:85551831-85551850 | None:intergenic | 35.0% | |
ATGTTCATTTGGGCAAATCT+AGG | - | chr3_1:85551873-85551892 | Msa0382800:intron | 35.0% | |
AGAGTATGAGTATTAGTCCT+AGG | - | chr3_1:85552009-85552028 | Msa0382800:intron | 35.0% | |
!!! | TTCTTTTTGGAGTAATGCTC+CGG | + | chr3_1:85552052-85552071 | None:intergenic | 35.0% |
TCTTTCTTGACACTCTTACA+GGG | + | chr3_1:85552418-85552437 | None:intergenic | 35.0% | |
TCTTTCTTGACACTCTTACA+GGG | + | chr3_1:85552418-85552437 | None:intergenic | 35.0% | |
!! | CAAATTTGTTACCTTTCTGC+TGG | - | chr3_1:85552956-85552975 | Msa0382800:intron | 35.0% |
! | GCAGATATTCAAGTTACAGA+AGG | - | chr3_1:85553022-85553041 | Msa0382800:intron | 35.0% |
GAGGAAAAAAAAAACCTTGG+AGG | + | chr3_1:85553090-85553109 | None:intergenic | 35.0% | |
ATGGTTCAAGGAACTAACAA+TGG | + | chr3_1:85553198-85553217 | None:intergenic | 35.0% | |
TTGCTTAATGCTGGAATTTG+TGG | - | chr3_1:85553675-85553694 | Msa0382800:intron | 35.0% | |
AAAACAAACTGTATAGGCAG+GGG | + | chr3_1:85553973-85553992 | None:intergenic | 35.0% | |
! | GTTTCCGAACCAAATGGATT+GGG | + | chr3_1:85546645-85546664 | None:intergenic | 40.0% |
!! | CAATCCATTTGGTTCGGAAA+CGG | - | chr3_1:85546644-85546663 | Msa0382800:three_prime_UTR | 40.0% |
GTGGGTGAGATTTGATGTTT+AGG | + | chr3_1:85546680-85546699 | None:intergenic | 40.0% | |
CTAACTACTTTGTGATGCAG+GGG | + | chr3_1:85546718-85546737 | None:intergenic | 40.0% | |
CTCTAACTACTTTGTGATGC+AGG | + | chr3_1:85546720-85546739 | None:intergenic | 40.0% | |
!!! | TTTTCCAGTGGTTTTAACGG+CGG | + | chr3_1:85546760-85546779 | None:intergenic | 40.0% |
!!! | GCGTTTTCCAGTGGTTTTAA+CGG | + | chr3_1:85546763-85546782 | None:intergenic | 40.0% |
ATATTCTTACAGTTACCGGC+GGG | + | chr3_1:85546815-85546834 | None:intergenic | 40.0% | |
GATATTCTTACAGTTACCGG+CGG | + | chr3_1:85546816-85546835 | None:intergenic | 40.0% | |
ATGAGAAGCGAAGGAAAATC+TGG | + | chr3_1:85546868-85546887 | None:intergenic | 40.0% | |
ACTTTGTGCGTGTATCATTC+TGG | + | chr3_1:85547281-85547300 | None:intergenic | 40.0% | |
AGTGAAATCATCTAAGCCCT+TGG | - | chr3_1:85547316-85547335 | Msa0382800:intron | 40.0% | |
! | CATCGAGTGTGGAATTTGTT+AGG | - | chr3_1:85547383-85547402 | Msa0382800:intron | 40.0% |
! | ACTAGAAGCGACATTGATTG+TGG | - | chr3_1:85547514-85547533 | Msa0382800:CDS | 40.0% |
AGAAAGCGGAAATATGGCAT+GGG | + | chr3_1:85547784-85547803 | None:intergenic | 40.0% | |
AAGAAAGCGGAAATATGGCA+TGG | + | chr3_1:85547785-85547804 | None:intergenic | 40.0% | |
TCAGCAAGAAAGCGGAAATA+TGG | + | chr3_1:85547790-85547809 | None:intergenic | 40.0% | |
!! | ACCAGCGGATTCTTTTTCTT+AGG | + | chr3_1:85547877-85547896 | None:intergenic | 40.0% |
AAAGAATCCGCTGGTGTTTA+TGG | - | chr3_1:85547882-85547901 | Msa0382800:CDS | 40.0% | |
GATACATCCATAAACACCAG+CGG | + | chr3_1:85547892-85547911 | None:intergenic | 40.0% | |
! | CGGAAATTTTCTGCAGTCTT+GGG | + | chr3_1:85548053-85548072 | None:intergenic | 40.0% |
! | ACGGAAATTTTCTGCAGTCT+TGG | + | chr3_1:85548054-85548073 | None:intergenic | 40.0% |
TGCTTGGATAGTACAAGACT+GGG | + | chr3_1:85548157-85548176 | None:intergenic | 40.0% | |
! | TATCCAAGCAGACAGGTTTT+TGG | - | chr3_1:85548167-85548186 | Msa0382800:CDS | 40.0% |
AATCAATCACAGAAAGGTGG+GGG | + | chr3_1:85548297-85548316 | None:intergenic | 40.0% | |
CAATCAATCACAGAAAGGTG+GGG | + | chr3_1:85548298-85548317 | None:intergenic | 40.0% | |
!! | TGATTGTTTTCAGGAGAGAG+AGG | - | chr3_1:85548312-85548331 | Msa0382800:CDS | 40.0% |
CCATGTTCAACCACAATGAA+AGG | + | chr3_1:85548474-85548493 | None:intergenic | 40.0% | |
CCTTTCATTGTGGTTGAACA+TGG | - | chr3_1:85548471-85548490 | Msa0382800:CDS | 40.0% | |
GTTTATGCTGTAGGATACAC+AGG | - | chr3_1:85548520-85548539 | Msa0382800:CDS | 40.0% | |
ATAATGCATACAGACTGGGT+TGG | + | chr3_1:85548681-85548700 | None:intergenic | 40.0% | |
GGAAACATGCAAATGGAACA+AGG | + | chr3_1:85548916-85548935 | None:intergenic | 40.0% | |
! | AAATTGGCCTGTAACTGAGT+AGG | - | chr3_1:85549005-85549024 | Msa0382800:intron | 40.0% |
! | AATTGGCCTGTAACTGAGTA+GGG | - | chr3_1:85549006-85549025 | Msa0382800:intron | 40.0% |
TAATAGCCCTACTCAGTTAC+AGG | + | chr3_1:85549015-85549034 | None:intergenic | 40.0% | |
TTACTGTCATGGCTTAGTCT+AGG | - | chr3_1:85549205-85549224 | Msa0382800:intron | 40.0% | |
! | GTCTATGCACTGCATTTTCA+GGG | - | chr3_1:85549299-85549318 | Msa0382800:intron | 40.0% |
! | ACTGGTGGAGAAAGCATATA+TGG | - | chr3_1:85549322-85549341 | Msa0382800:intron | 40.0% |
ATGGTTCAAACTTTCCTGGT+AGG | - | chr3_1:85549341-85549360 | Msa0382800:intron | 40.0% | |
GAATAGCAAACCTGTCAAGA+TGG | + | chr3_1:85549569-85549588 | None:intergenic | 40.0% | |
!! | GAAGATGTTGGTGATGATGA+AGG | - | chr3_1:85549751-85549770 | Msa0382800:intron | 40.0% |
! | AATGAGGGTATGGATTGCTT+AGG | - | chr3_1:85549817-85549836 | Msa0382800:intron | 40.0% |
! | AGAGCACCTTCAATTGAAGA+GGG | + | chr3_1:85549956-85549975 | None:intergenic | 40.0% |
! | TAGAGCACCTTCAATTGAAG+AGG | + | chr3_1:85549957-85549976 | None:intergenic | 40.0% |
GCAATAATCTTGAAACACGG+AGG | - | chr3_1:85550093-85550112 | Msa0382800:intron | 40.0% | |
TAATCTTGAAACACGGAGGA+AGG | - | chr3_1:85550097-85550116 | Msa0382800:intron | 40.0% | |
AATCTTGAAACACGGAGGAA+GGG | - | chr3_1:85550098-85550117 | Msa0382800:intron | 40.0% | |
AGAGGTCTTCAAAAGACAGA+AGG | - | chr3_1:85550129-85550148 | Msa0382800:intron | 40.0% | |
AACTCTCTGATTCAGATGAG+TGG | + | chr3_1:85550169-85550188 | None:intergenic | 40.0% | |
GAGTTCTTCAGATTCAGACA+TGG | - | chr3_1:85550184-85550203 | Msa0382800:intron | 40.0% | |
!! | TTTTCAAGGTCTCATACTGC+AGG | - | chr3_1:85550952-85550971 | Msa0382800:intron | 40.0% |
AATCTGGCAGTGATTCAGAA+TGG | - | chr3_1:85550990-85551009 | Msa0382800:intron | 40.0% | |
GAAGTAAACGCCAAGAGAAT+TGG | + | chr3_1:85551108-85551127 | None:intergenic | 40.0% | |
ACCCACCATTCATCATAGAA+AGG | - | chr3_1:85551727-85551746 | Msa0382800:intron | 40.0% | |
TCATCATAGAAAGGAAGAGG+CGG | - | chr3_1:85551736-85551755 | Msa0382800:intron | 40.0% | |
!!! | ACAGTTTTTTCATTGCTCGC+TGG | + | chr3_1:85551767-85551786 | None:intergenic | 40.0% |
CTGTAAAGGAAAATGGAGAG+CGG | - | chr3_1:85551783-85551802 | Msa0382800:intron | 40.0% | |
AAATGAACATCCATCACGTC+AGG | + | chr3_1:85551863-85551882 | None:intergenic | 40.0% | |
!! | TGACGTGATGGATGTTCATT+TGG | - | chr3_1:85551862-85551881 | Msa0382800:intron | 40.0% |
!! | GACGTGATGGATGTTCATTT+GGG | - | chr3_1:85551863-85551882 | Msa0382800:intron | 40.0% |
AACTAAGGTGTGACAAGAGA+GGG | + | chr3_1:85551906-85551925 | None:intergenic | 40.0% | |
TAACTAAGGTGTGACAAGAG+AGG | + | chr3_1:85551907-85551926 | None:intergenic | 40.0% | |
GTATGAGTATTAGTCCTAGG+AGG | - | chr3_1:85552012-85552031 | Msa0382800:intron | 40.0% | |
TTAAGAGGACGAGTTATCAC+AGG | + | chr3_1:85552278-85552297 | None:intergenic | 40.0% | |
CTCTTTCGTGATGATACTCT+GGG | + | chr3_1:85552347-85552366 | None:intergenic | 40.0% | |
CTCTTTCTTGACACTCTTAC+AGG | + | chr3_1:85552419-85552438 | None:intergenic | 40.0% | |
ACATAAGTCGCAGTCCATTA+AGG | - | chr3_1:85552510-85552529 | Msa0382800:intron | 40.0% | |
CGACTTAAGCTCTTCCTTAA+TGG | + | chr3_1:85552527-85552546 | None:intergenic | 40.0% | |
CTCTTTCTTGACACTCTTAC+AGG | + | chr3_1:85552419-85552438 | None:intergenic | 40.0% | |
ATAATCGCCGCAGTTATTCT+AGG | - | chr3_1:85552720-85552739 | Msa0382800:CDS | 40.0% | |
TAGGACTCCTAGAATAACTG+CGG | + | chr3_1:85552730-85552749 | None:intergenic | 40.0% | |
AACGATACTCCTATGCAAGA+AGG | - | chr3_1:85552852-85552871 | Msa0382800:intron | 40.0% | |
GGTTCTATACCTTCTTGCAT+AGG | + | chr3_1:85552864-85552883 | None:intergenic | 40.0% | |
ATGGAAGAATTGATCGTGAC+AGG | - | chr3_1:85552918-85552937 | Msa0382800:intron | 40.0% | |
!! | GGAATATACTTAGGTACCGA+AGG | - | chr3_1:85553259-85553278 | Msa0382800:intron | 40.0% |
TTCTGCTATATCTTCGAGCT+CGG | + | chr3_1:85553323-85553342 | None:intergenic | 40.0% | |
ACAGAAGACCTAGATTTCAC+TGG | + | chr3_1:85553453-85553472 | None:intergenic | 40.0% | |
AACAGTACCCAAAACCATAG+GGG | + | chr3_1:85553607-85553626 | None:intergenic | 40.0% | |
CAACAGTACCCAAAACCATA+GGG | + | chr3_1:85553608-85553627 | None:intergenic | 40.0% | |
ACAACAGTACCCAAAACCAT+AGG | + | chr3_1:85553609-85553628 | None:intergenic | 40.0% | |
! | GTTGTCATCTTTTGTGAGCT+TGG | - | chr3_1:85553624-85553643 | Msa0382800:intron | 40.0% |
! | TGTGAGCTTGGCTTCAATTT+TGG | - | chr3_1:85553636-85553655 | Msa0382800:intron | 40.0% |
GTGAAATTAGGATATGTCCC+TGG | - | chr3_1:85553782-85553801 | Msa0382800:five_prime_UTR | 40.0% | |
AAATTAGGATATGTCCCTGG+TGG | - | chr3_1:85553785-85553804 | Msa0382800:five_prime_UTR | 40.0% | |
GGTAGAGTTATTGCGGTATT+TGG | - | chr3_1:85553806-85553825 | Msa0382800:five_prime_UTR | 40.0% | |
AGAGTTATTGCGGTATTTGG+TGG | - | chr3_1:85553809-85553828 | Msa0382800:five_prime_UTR | 40.0% | |
! | ATTTGGTGGAACTGGAGTTA+AGG | - | chr3_1:85553823-85553842 | Msa0382800:five_prime_UTR | 40.0% |
!! | CAAATGGATTGGGCTTGGAT+TGG | + | chr3_1:85546635-85546654 | None:intergenic | 45.0% |
CAATCCAAGCCCAATCCATT+TGG | - | chr3_1:85546633-85546652 | Msa0382800:three_prime_UTR | 45.0% | |
CAAGCCCAATCCATTTGGTT+CGG | - | chr3_1:85546638-85546657 | Msa0382800:three_prime_UTR | 45.0% | |
CGTTTCCGAACCAAATGGAT+TGG | + | chr3_1:85546646-85546665 | None:intergenic | 45.0% | |
TTTGTGATGCAGGGGCAAAA+TGG | + | chr3_1:85546710-85546729 | None:intergenic | 45.0% | |
!!! | TTTCCAGTGGTTTTAACGGC+GGG | + | chr3_1:85546759-85546778 | None:intergenic | 45.0% |
GATTACGTGCGTGATCATTC+TGG | + | chr3_1:85547570-85547589 | None:intergenic | 45.0% | |
TCAGGATTCGTTGAGTGTCA+AGG | + | chr3_1:85547671-85547690 | None:intergenic | 45.0% | |
CGGTCCCAATTGTATTGTAC+TGG | - | chr3_1:85547755-85547774 | Msa0382800:CDS | 45.0% | |
GCCTAAGAAAAAGAATCCGC+TGG | - | chr3_1:85547873-85547892 | Msa0382800:CDS | 45.0% | |
TGGGGATCCCGTTAAAAGAA+TGG | - | chr3_1:85547918-85547937 | Msa0382800:CDS | 45.0% | |
CAGCACGATGATCACACATT+AGG | + | chr3_1:85548006-85548025 | None:intergenic | 45.0% | |
CAAGACTGGGATGGAAGAAA+AGG | + | chr3_1:85548144-85548163 | None:intergenic | 45.0% | |
TGGATAGTACAAGACTGGGA+TGG | + | chr3_1:85548153-85548172 | None:intergenic | 45.0% | |
CTGCTTGGATAGTACAAGAC+TGG | + | chr3_1:85548158-85548177 | None:intergenic | 45.0% | |
CTTGTACTATCCAAGCAGAC+AGG | - | chr3_1:85548160-85548179 | Msa0382800:CDS | 45.0% | |
TGTCCAAAAACCTGTCTGCT+TGG | + | chr3_1:85548173-85548192 | None:intergenic | 45.0% | |
GGATAAGTGCACCGTTCAAT+AGG | + | chr3_1:85548273-85548292 | None:intergenic | 45.0% | |
TATGAAAGGCTCCATCGTGA+AGG | - | chr3_1:85548392-85548411 | Msa0382800:CDS | 45.0% | |
ATGGAACAAGGCTTGCAACT+CGG | + | chr3_1:85548904-85548923 | None:intergenic | 45.0% | |
CGTCACAGGAAACATGCAAA+TGG | + | chr3_1:85548923-85548942 | None:intergenic | 45.0% | |
TTGCATGTTTCCTGTGACGA+TGG | - | chr3_1:85548924-85548943 | Msa0382800:intron | 45.0% | |
! | CGTCTATGCACTGCATTTTC+AGG | - | chr3_1:85549298-85549317 | Msa0382800:intron | 45.0% |
TCACCTAGGCTAAAGCATGA+TGG | - | chr3_1:85549465-85549484 | Msa0382800:intron | 45.0% | |
TTGCCATTGACAAAAGCCCA+GGG | + | chr3_1:85549491-85549510 | None:intergenic | 45.0% | |
ATTGCCATTGACAAAAGCCC+AGG | + | chr3_1:85549492-85549511 | None:intergenic | 45.0% | |
ATTGCTGACCGTGATAAGCT+TGG | - | chr3_1:85549510-85549529 | Msa0382800:intron | 45.0% | |
AAGCTGATCACCATCTTGAC+AGG | - | chr3_1:85549556-85549575 | Msa0382800:intron | 45.0% | |
!! | TCTTTGGGAGGCTTGTTGAA+GGG | - | chr3_1:85549707-85549726 | Msa0382800:intron | 45.0% |
GAGATAAACGCCGTGACAAA+AGG | - | chr3_1:85550336-85550355 | Msa0382800:CDS | 45.0% | |
! | GTCTTCTTCGCCTTTTGTCA+CGG | + | chr3_1:85550349-85550368 | None:intergenic | 45.0% |
GTGACAAAAGGCGAAGAAGA+CGG | - | chr3_1:85550348-85550367 | Msa0382800:CDS | 45.0% | |
TGACAAAAGGCGAAGAAGAC+GGG | - | chr3_1:85550349-85550368 | Msa0382800:CDS | 45.0% | |
GATCGAAGCGCAGATCAAAA+AGG | - | chr3_1:85550378-85550397 | Msa0382800:CDS | 45.0% | |
AACTTACAATCTTGGGTGCC+TGG | - | chr3_1:85550781-85550800 | Msa0382800:intron | 45.0% | |
GCAGTGATTCAGAATGGTAG+AGG | - | chr3_1:85550996-85551015 | Msa0382800:intron | 45.0% | |
GCATCTTTCTCCACAAGTGA+GGG | + | chr3_1:85551707-85551726 | None:intergenic | 45.0% | |
TGCATCTTTCTCCACAAGTG+AGG | + | chr3_1:85551708-85551727 | None:intergenic | 45.0% | |
CATCATAGAAAGGAAGAGGC+GGG | - | chr3_1:85551737-85551756 | Msa0382800:intron | 45.0% | |
GATCTGACAGAAGTGAAGAG+AGG | - | chr3_1:85551834-85551853 | Msa0382800:intron | 45.0% | |
TCTTACTCATGGGTCGCTTA+GGG | + | chr3_1:85551992-85552011 | None:intergenic | 45.0% | |
GTATTAGTCCTAGGAGGAGT+AGG | - | chr3_1:85552018-85552037 | Msa0382800:intron | 45.0% | |
AAACTCCTCCTTGATAGACG+AGG | + | chr3_1:85552110-85552129 | None:intergenic | 45.0% | |
!! | GTCCTGTTAGAAGCATTGAC+AGG | - | chr3_1:85552186-85552205 | Msa0382800:intron | 45.0% |
CTCCTGTCAATGCTTCTAAC+AGG | + | chr3_1:85552191-85552210 | None:intergenic | 45.0% | |
!! | GTCCTCTTAAAAGTGTCAGC+AGG | - | chr3_1:85552288-85552307 | Msa0382800:intron | 45.0% |
! | CTCCTGCTGACACTTTTAAG+AGG | + | chr3_1:85552293-85552312 | None:intergenic | 45.0% |
GCTCTTTCGTGATGATACTC+TGG | + | chr3_1:85552348-85552367 | None:intergenic | 45.0% | |
CTTCTTGCAGGTGATCTAAC+TGG | + | chr3_1:85552383-85552402 | None:intergenic | 45.0% | |
CTTCTGCTTAAGCTTCTTGC+AGG | + | chr3_1:85552395-85552414 | None:intergenic | 45.0% | |
CTTCTGCTTAAGCTTCTTGC+AGG | + | chr3_1:85552395-85552414 | None:intergenic | 45.0% | |
CTTCTGCTTAAGCTTCTTGC+AGG | + | chr3_1:85552395-85552414 | None:intergenic | 45.0% | |
CTTCTTGCAGGTGATCTAAC+TGG | + | chr3_1:85552383-85552402 | None:intergenic | 45.0% | |
CTTCTGCTTAAGCTTCTTGC+AGG | + | chr3_1:85552395-85552414 | None:intergenic | 45.0% | |
AGAAGCTTAAGCAGAAGCTC+TGG | - | chr3_1:85552641-85552660 | Msa0382800:intron | 45.0% | |
! | CTTAAGCAGAAGCTCTGGTA+GGG | - | chr3_1:85552646-85552665 | Msa0382800:intron | 45.0% |
GGCTAATGCTTCTCTTTGAG+GGG | + | chr3_1:85552673-85552692 | None:intergenic | 45.0% | |
CGGCTAATGCTTCTCTTTGA+GGG | + | chr3_1:85552674-85552693 | None:intergenic | 45.0% | |
TCGGCTAATGCTTCTCTTTG+AGG | + | chr3_1:85552675-85552694 | None:intergenic | 45.0% | |
!! | CTGCGGCGATTATTTCTACT+GGG | + | chr3_1:85552713-85552732 | None:intergenic | 45.0% |
!! | ACTGCGGCGATTATTTCTAC+TGG | + | chr3_1:85552714-85552733 | None:intergenic | 45.0% |
GTGTTCTTCTCCTACGTACA+GGG | + | chr3_1:85552754-85552773 | None:intergenic | 45.0% | |
TTCGCCAAAGCGTATCAGAA+GGG | - | chr3_1:85552814-85552833 | Msa0382800:intron | 45.0% | |
! | TTGTATCGGTATGACCTCAC+AGG | + | chr3_1:85552899-85552918 | None:intergenic | 45.0% |
GTGAGGTCATACCGATACAA+TGG | - | chr3_1:85552899-85552918 | Msa0382800:intron | 45.0% | |
!! | GTTACAGAAGGTATTCCCCT+AGG | - | chr3_1:85553034-85553053 | Msa0382800:intron | 45.0% |
!! | CTACTTGCTTTTCGTGGAGA+TGG | + | chr3_1:85553483-85553502 | None:intergenic | 45.0% |
!! | CTGTCTCTACTTGCTTTTCG+TGG | + | chr3_1:85553489-85553508 | None:intergenic | 45.0% |
CACGAAAAGCAAGTAGAGAC+AGG | - | chr3_1:85553487-85553506 | Msa0382800:intron | 45.0% | |
! | AAGAGAGGCTTGGTCTCATA+CGG | - | chr3_1:85553540-85553559 | Msa0382800:intron | 45.0% |
GGGACCAAGAATTTCACCTT+TGG | + | chr3_1:85553587-85553606 | None:intergenic | 45.0% | |
GTGAAATTCTTGGTCCCCTA+TGG | - | chr3_1:85553590-85553609 | Msa0382800:intron | 45.0% | |
! | TTCTTGGTCCCCTATGGTTT+TGG | - | chr3_1:85553596-85553615 | Msa0382800:intron | 45.0% |
! | TCTTGGTCCCCTATGGTTTT+GGG | - | chr3_1:85553597-85553616 | Msa0382800:intron | 45.0% |
CCAGCATTAAGCAAAGCAGA+AGG | + | chr3_1:85553669-85553688 | None:intergenic | 45.0% | |
CCTTCTGCTTTGCTTAATGC+TGG | - | chr3_1:85553666-85553685 | Msa0382800:intron | 45.0% | |
! | ATTGCGGTATTTGGTGGAAC+TGG | - | chr3_1:85553815-85553834 | Msa0382800:five_prime_UTR | 45.0% |
CTCAAATGATTGTGCTACCG+AGG | + | chr3_1:85553877-85553896 | None:intergenic | 45.0% | |
!! | TAAATAAATATAAATAAATC+TGG | - | chr3_1:85547189-85547208 | Msa0382800:CDS | 5.0% |
!! | CGAACCAAATGGATTGGGCT+TGG | + | chr3_1:85546640-85546659 | None:intergenic | 50.0% |
!!! | TTCCAGTGGTTTTAACGGCG+GGG | + | chr3_1:85546758-85546777 | None:intergenic | 50.0% |
AAACCACTGGAAAACGCTGC+CGG | - | chr3_1:85546766-85546785 | Msa0382800:three_prime_UTR | 50.0% | |
CTTCCTACGACGAAGAAGTC+CGG | + | chr3_1:85546788-85546807 | None:intergenic | 50.0% | |
TTCCTTCGCTTCTCATCGTG+CGG | - | chr3_1:85546872-85546891 | Msa0382800:three_prime_UTR | 50.0% | |
ACTAGAAGCGACATCGAGTG+TGG | - | chr3_1:85547372-85547391 | Msa0382800:intron | 50.0% | |
CAGTCTTGGGAGCAACATCA+TGG | + | chr3_1:85548040-85548059 | None:intergenic | 50.0% | |
GGTTGAACATGGCTTAGCAG+TGG | - | chr3_1:85548482-85548501 | Msa0382800:CDS | 50.0% | |
TGTAGGATACACAGGGCTGA+TGG | - | chr3_1:85548528-85548547 | Msa0382800:CDS | 50.0% | |
!! | TGCACTGCATTTTCAGGGAC+TGG | - | chr3_1:85549304-85549323 | Msa0382800:intron | 50.0% |
!! | ACTGCATTTTCAGGGACTGG+TGG | - | chr3_1:85549307-85549326 | Msa0382800:intron | 50.0% |
! | ATTGCCTGATTGTGCTGCTG+TGG | - | chr3_1:85549660-85549679 | Msa0382800:intron | 50.0% |
! | TTGCCTGATTGTGCTGCTGT+GGG | - | chr3_1:85549661-85549680 | Msa0382800:intron | 50.0% |
!! | GTCTTTGGGAGGCTTGTTGA+AGG | - | chr3_1:85549706-85549725 | Msa0382800:intron | 50.0% |
!! | GAGGCTTGTTGAAGGGCTTA+AGG | - | chr3_1:85549714-85549733 | Msa0382800:intron | 50.0% |
TGCCTGGTTGATTAGTGCGA+TGG | - | chr3_1:85550797-85550816 | Msa0382800:CDS | 50.0% | |
GACCATCGCACTAATCAACC+AGG | + | chr3_1:85550802-85550821 | None:intergenic | 50.0% | |
CAGGGAATCTGGCAGTGATT+CGG | - | chr3_1:85551411-85551430 | Msa0382800:intron | 50.0% | |
ACTGAAGTCTCCCTCACTTG+TGG | - | chr3_1:85551694-85551713 | Msa0382800:intron | 50.0% | |
AATGGAGAGCGGCATAGCAA+TGG | - | chr3_1:85551794-85551813 | Msa0382800:intron | 50.0% | |
CTCTTACTCATGGGTCGCTT+AGG | + | chr3_1:85551993-85552012 | None:intergenic | 50.0% | |
TCCTCCTTGATAGACGAGGA+GGG | + | chr3_1:85552106-85552125 | None:intergenic | 50.0% | |
CAGTAGTCCTGTCAGAAGCA+TGG | - | chr3_1:85552133-85552152 | Msa0382800:intron | 50.0% | |
! | AGGAGTCCTGTTAGGAGCAT+CGG | - | chr3_1:85552158-85552177 | Msa0382800:intron | 50.0% |
!! | GAAGCATTGACAGGAGTCCT+AGG | - | chr3_1:85552195-85552214 | Msa0382800:CDS | 50.0% |
! | AGGAGTCCTAGGAGAAGCAT+CGG | - | chr3_1:85552206-85552225 | Msa0382800:CDS | 50.0% |
CTTCTTGCAGGCGATCTAAC+TGG | + | chr3_1:85552554-85552573 | None:intergenic | 50.0% | |
! | GCTTAAGCAGAAGCTCTGGT+AGG | - | chr3_1:85552645-85552664 | Msa0382800:intron | 50.0% |
CATTAGCCGAAGTCCTGTCA+GGG | - | chr3_1:85552685-85552704 | Msa0382800:CDS | 50.0% | |
GGTGTTCTTCTCCTACGTAC+AGG | + | chr3_1:85552755-85552774 | None:intergenic | 50.0% | |
GTAGGAGAAGAACACCTCGT+GGG | - | chr3_1:85552759-85552778 | Msa0382800:intron | 50.0% | |
TAGGAGAAGAACACCTCGTG+GGG | - | chr3_1:85552760-85552779 | Msa0382800:intron | 50.0% | |
! | ATACGCTTTGGCGAAGCATC+AGG | + | chr3_1:85552809-85552828 | None:intergenic | 50.0% |
CTTCGCCAAAGCGTATCAGA+AGG | - | chr3_1:85552813-85552832 | Msa0382800:intron | 50.0% | |
TCGCCAAAGCGTATCAGAAG+GGG | - | chr3_1:85552815-85552834 | Msa0382800:intron | 50.0% | |
CTTCCCCTTCTGATACGCTT+TGG | + | chr3_1:85552821-85552840 | None:intergenic | 50.0% | |
AAGCGTATCAGAAGGGGAAG+AGG | - | chr3_1:85552821-85552840 | Msa0382800:intron | 50.0% | |
! | GAAGGTATAGAACCCCTTCC+CGG | - | chr3_1:85552870-85552889 | Msa0382800:intron | 50.0% |
!! | TGGACTTCTGAAACGCCTAG+GGG | + | chr3_1:85553052-85553071 | None:intergenic | 50.0% |
!! | GTGGACTTCTGAAACGCCTA+GGG | + | chr3_1:85553053-85553072 | None:intergenic | 50.0% |
! | ATGGTGATCGGCTTCTCCTT+CGG | + | chr3_1:85553278-85553297 | None:intergenic | 50.0% |
TGGGCGAAACAGATGGTGAT+CGG | + | chr3_1:85553290-85553309 | None:intergenic | 50.0% | |
TGCCTTTCTACACGAGGAGA+GGG | + | chr3_1:85553405-85553424 | None:intergenic | 50.0% | |
ATGCCTTTCTACACGAGGAG+AGG | + | chr3_1:85553406-85553425 | None:intergenic | 50.0% | |
GACGAATGCCTTTCTACACG+AGG | + | chr3_1:85553411-85553430 | None:intergenic | 50.0% | |
!! | AAAGGCATTCGTCGTACTCC+CGG | - | chr3_1:85553418-85553437 | Msa0382800:intron | 50.0% |
ATTTCACTGGACTCCTGCTC+CGG | + | chr3_1:85553440-85553459 | None:intergenic | 50.0% | |
GCAGGAGTCCAGTGAAATCT+AGG | - | chr3_1:85553442-85553461 | Msa0382800:intron | 50.0% | |
TCATCATCCAGAAGCCCAGA+TGG | - | chr3_1:85553516-85553535 | Msa0382800:intron | 50.0% | |
TCTCTTTCCATCTGGGCTTC+TGG | + | chr3_1:85553526-85553545 | None:intergenic | 50.0% | |
AGAAGCCCAGATGGAAAGAG+AGG | - | chr3_1:85553525-85553544 | Msa0382800:intron | 50.0% | |
CCAAGCCTCTCTTTCCATCT+GGG | + | chr3_1:85553533-85553552 | None:intergenic | 50.0% | |
ACCAAGCCTCTCTTTCCATC+TGG | + | chr3_1:85553534-85553553 | None:intergenic | 50.0% | |
CGGGCCAAAGGTGAAATTCT+TGG | - | chr3_1:85553580-85553599 | Msa0382800:intron | 50.0% | |
CCGCAATAACTCTACCACCA+GGG | + | chr3_1:85553802-85553821 | None:intergenic | 50.0% | |
CCCTGGTGGTAGAGTTATTG+CGG | - | chr3_1:85553799-85553818 | Msa0382800:five_prime_UTR | 50.0% | |
ACCGCAATAACTCTACCACC+AGG | + | chr3_1:85553803-85553822 | None:intergenic | 50.0% | |
TTTGTTGCCTGCCATGTCCT+CGG | - | chr3_1:85553857-85553876 | Msa0382800:five_prime_UTR | 50.0% | |
TGATTGTGCTACCGAGGACA+TGG | + | chr3_1:85553871-85553890 | None:intergenic | 50.0% | |
AGGGCCGTTTCCGAACCAAA+TGG | + | chr3_1:85546651-85546670 | None:intergenic | 55.0% | |
GGGCAAAATGGCAGTGCAGT+GGG | + | chr3_1:85546698-85546717 | None:intergenic | 55.0% | |
AACCCCGCCGTTAAAACCAC+TGG | - | chr3_1:85546753-85546772 | Msa0382800:three_prime_UTR | 55.0% | |
CGGACTTCTTCGTCGTAGGA+AGG | - | chr3_1:85546786-85546805 | Msa0382800:three_prime_UTR | 55.0% | |
ACCACGATCCCGCAATCAAG+CGG | - | chr3_1:85546946-85546965 | Msa0382800:three_prime_UTR | 55.0% | |
TCTGTGCACCGCTTGATTGC+GGG | + | chr3_1:85546957-85546976 | None:intergenic | 55.0% | |
CTCTGTGCACCGCTTGATTG+CGG | + | chr3_1:85546958-85546977 | None:intergenic | 55.0% | |
CAATCACAGAAAGGTGGGGG+AGG | + | chr3_1:85548294-85548313 | None:intergenic | 55.0% | |
GGGCCATCATGCTTTAGCCT+AGG | + | chr3_1:85549471-85549490 | None:intergenic | 55.0% | |
AGGCTAAAGCATGATGGCCC+TGG | - | chr3_1:85549471-85549490 | Msa0382800:intron | 55.0% | |
GGCTAAAGCATGATGGCCCT+GGG | - | chr3_1:85549472-85549491 | Msa0382800:intron | 55.0% | |
! | TGGCCCTGGGCTTTTGTCAA+TGG | - | chr3_1:85549485-85549504 | Msa0382800:intron | 55.0% |
! | TGCCTGATTGTGCTGCTGTG+GGG | - | chr3_1:85549662-85549681 | Msa0382800:intron | 55.0% |
! | CTGCTGTGGGGCAATTTTGC+AGG | - | chr3_1:85549674-85549693 | Msa0382800:intron | 55.0% |
GGAAAGGATGGAGCCTGTGA+AGG | - | chr3_1:85550071-85550090 | Msa0382800:intron | 55.0% | |
GGAGGAAGGGAAAGCTCAAG+AGG | - | chr3_1:85550111-85550130 | Msa0382800:intron | 55.0% | |
GAGGGAGACTTCAGTTCAGC+TGG | + | chr3_1:85551689-85551708 | None:intergenic | 55.0% | |
GAGCGGCATAGCAATGGTAC+TGG | - | chr3_1:85551800-85551819 | Msa0382800:intron | 55.0% | |
CTCTTGCTCCTACTCCTCCT+AGG | + | chr3_1:85552029-85552048 | None:intergenic | 55.0% | |
GGAGGGCTTCTACTGACACT+TGG | + | chr3_1:85552089-85552108 | None:intergenic | 55.0% | |
GAAGCCCTCCTCGTCTATCA+AGG | - | chr3_1:85552099-85552118 | Msa0382800:intron | 55.0% | |
CTCCTCCTTGATAGACGAGG+AGG | + | chr3_1:85552107-85552126 | None:intergenic | 55.0% | |
! | GTCCTGTCAGAAGCATGGAC+AGG | - | chr3_1:85552138-85552157 | Msa0382800:intron | 55.0% |
CTCCTGTCCATGCTTCTGAC+AGG | + | chr3_1:85552143-85552162 | None:intergenic | 55.0% | |
GCATGGACAGGAGTCCTGTT+AGG | - | chr3_1:85552150-85552169 | Msa0382800:intron | 55.0% | |
!! | GTCCTAGGAGAAGCATCGGA+AGG | - | chr3_1:85552210-85552229 | Msa0382800:CDS | 55.0% |
CTCCTTCCGATGCTTCTCCT+AGG | + | chr3_1:85552215-85552234 | None:intergenic | 55.0% | |
CTTCTTGCAGGCGCTCTAAC+TGG | + | chr3_1:85552455-85552474 | None:intergenic | 55.0% | |
GCATTAGCCGAAGTCCTGTC+AGG | - | chr3_1:85552684-85552703 | Msa0382800:CDS | 55.0% | |
TTTCTACTGGGTGCCCTGAC+AGG | + | chr3_1:85552701-85552720 | None:intergenic | 55.0% | |
CTTCTCCTACGTACAGGGCT+AGG | + | chr3_1:85552749-85552768 | None:intergenic | 55.0% | |
CGTAGGAGAAGAACACCTCG+TGG | - | chr3_1:85552758-85552777 | Msa0382800:intron | 55.0% | |
AGGAGAAGAACACCTCGTGG+GGG | - | chr3_1:85552761-85552780 | Msa0382800:intron | 55.0% | |
CTAGACAAACTACCCCCACG+AGG | + | chr3_1:85552776-85552795 | None:intergenic | 55.0% | |
GTATGACCTCACAGGAGACC+GGG | + | chr3_1:85552891-85552910 | None:intergenic | 55.0% | |
GGTATGACCTCACAGGAGAC+CGG | + | chr3_1:85552892-85552911 | None:intergenic | 55.0% | |
!! | GGTGGACTTCTGAAACGCCT+AGG | + | chr3_1:85553054-85553073 | None:intergenic | 55.0% |
GGCGTTTCAGAAGTCCACCA+CGG | - | chr3_1:85553055-85553074 | Msa0382800:intron | 55.0% | |
GCGTTTCAGAAGTCCACCAC+GGG | - | chr3_1:85553056-85553075 | Msa0382800:intron | 55.0% | |
CGTTTCAGAAGTCCACCACG+GGG | - | chr3_1:85553057-85553076 | Msa0382800:intron | 55.0% | |
ATCTTCGAGCTCGGTAGCGT+GGG | + | chr3_1:85553314-85553333 | None:intergenic | 55.0% | |
TATCTTCGAGCTCGGTAGCG+TGG | + | chr3_1:85553315-85553334 | None:intergenic | 55.0% | |
TTCGCATTCGCTCCCCAGTT+CGG | - | chr3_1:85553355-85553374 | Msa0382800:intron | 55.0% | |
GCCTTTCTACACGAGGAGAG+GGG | + | chr3_1:85553404-85553423 | None:intergenic | 55.0% | |
TTTCACTGGACTCCTGCTCC+GGG | + | chr3_1:85553439-85553458 | None:intergenic | 55.0% | |
CCCAGATGGAAAGAGAGGCT+TGG | - | chr3_1:85553530-85553549 | Msa0382800:intron | 55.0% | |
TTTCACCTTTGGCCCGAGTC+AGG | + | chr3_1:85553576-85553595 | None:intergenic | 55.0% | |
GGGGCAAAATGGCAGTGCAG+TGG | + | chr3_1:85546699-85546718 | None:intergenic | 60.0% | |
! | AGTCCGGCAGCGTTTTCCAG+TGG | + | chr3_1:85546772-85546791 | None:intergenic | 60.0% |
CTGCCGGACTTCTTCGTCGT+AGG | - | chr3_1:85546782-85546801 | Msa0382800:three_prime_UTR | 60.0% | |
GTCGTAGGAAGGAATCCCGC+CGG | - | chr3_1:85546797-85546816 | Msa0382800:three_prime_UTR | 60.0% | |
TGCCGCACGATGAGAAGCGA+AGG | + | chr3_1:85546877-85546896 | None:intergenic | 60.0% | |
GCTTGATTGCGGGATCGTGG+TGG | + | chr3_1:85546947-85546966 | None:intergenic | 60.0% | |
ACCGCTTGATTGCGGGATCG+TGG | + | chr3_1:85546950-85546969 | None:intergenic | 60.0% | |
ATCAAGCGGTGCACAGAGCG+TGG | - | chr3_1:85546960-85546979 | Msa0382800:three_prime_UTR | 60.0% | |
TGCCCCACAGCAGCACAATC+AGG | + | chr3_1:85549667-85549686 | None:intergenic | 60.0% | |
AGAGAGGCAGCCTGACGTGA+TGG | - | chr3_1:85551850-85551869 | Msa0382800:intron | 60.0% | |
GGAGGAGTAGGAGCAAGAGC+CGG | - | chr3_1:85552030-85552049 | Msa0382800:intron | 60.0% | |
GCCCTCCTCGTCTATCAAGG+AGG | - | chr3_1:85552102-85552121 | Msa0382800:intron | 60.0% | |
!! | GTCCTGTTAGGAGCATCGGC+AGG | - | chr3_1:85552162-85552181 | Msa0382800:intron | 60.0% |
CTCCTGCCGATGCTCCTAAC+AGG | + | chr3_1:85552167-85552186 | None:intergenic | 60.0% | |
!! | GAGAAGCATCGGAAGGAGCC+CGG | - | chr3_1:85552217-85552236 | Msa0382800:CDS | 60.0% |
TGCTCCGGCGGGATCTTACA+GGG | + | chr3_1:85552316-85552335 | None:intergenic | 60.0% | |
! | CTCTGGGAGAACTCCTGCTC+CGG | + | chr3_1:85552331-85552350 | None:intergenic | 60.0% |
TGGGTGCCCTGACAGGACTT+CGG | + | chr3_1:85552694-85552713 | None:intergenic | 60.0% | |
GGAGTCCTAGCCCTGTACGT+AGG | - | chr3_1:85552741-85552760 | Msa0382800:intron | 60.0% | |
ACCTCACAGGAGACCGGGAA+GGG | + | chr3_1:85552886-85552905 | None:intergenic | 60.0% | |
CTTGGAGGAGTTCTTCCCCG+TGG | + | chr3_1:85553075-85553094 | None:intergenic | 60.0% | |
CACGGGGAAGAACTCCTCCA+AGG | - | chr3_1:85553073-85553092 | Msa0382800:intron | 60.0% | |
AGCGAATGCGAACTGGGCTG+CGG | + | chr3_1:85553347-85553366 | None:intergenic | 60.0% | |
CTGGGGAGCGAATGCGAACT+GGG | + | chr3_1:85553353-85553372 | None:intergenic | 60.0% | |
ACTGGGGAGCGAATGCGAAC+TGG | + | chr3_1:85553354-85553373 | None:intergenic | 60.0% | |
AGGAGAGGGGCGAGATCGAT+CGG | + | chr3_1:85553391-85553410 | None:intergenic | 60.0% | |
GCCCCTCTCCTCGTGTAGAA+AGG | - | chr3_1:85553400-85553419 | Msa0382800:intron | 60.0% | |
ATTCGTCGTACTCCCGGAGC+AGG | - | chr3_1:85553424-85553443 | Msa0382800:intron | 60.0% | |
! | GGCTTGGTCTCATACGGCGA+TGG | - | chr3_1:85553546-85553565 | Msa0382800:intron | 60.0% |
CGGCGATGGTTCTCCTGACT+CGG | - | chr3_1:85553560-85553579 | Msa0382800:intron | 60.0% | |
GGCGATGGTTCTCCTGACTC+GGG | - | chr3_1:85553561-85553580 | Msa0382800:intron | 60.0% | |
!! | GTTCTCCTGACTCGGGCCAA+AGG | - | chr3_1:85553568-85553587 | Msa0382800:intron | 60.0% |
TGTGCTACCGAGGACATGGC+AGG | + | chr3_1:85553867-85553886 | None:intergenic | 60.0% | |
CATCGGAAGGAGCCCGGTGA+GGG | - | chr3_1:85552223-85552242 | Msa0382800:CDS | 65.0% | |
ATCGGAAGGAGCCCGGTGAG+GGG | - | chr3_1:85552224-85552243 | Msa0382800:CDS | 65.0% | |
GAGGGGCAGGAAGGGGAGAA+AGG | - | chr3_1:85552241-85552260 | Msa0382800:CDS | 65.0% | |
GGAGCCCTGTAAGATCCCGC+CGG | - | chr3_1:85552309-85552328 | Msa0382800:intron | 65.0% | |
CTGCTCCGGCGGGATCTTAC+AGG | + | chr3_1:85552317-85552336 | None:intergenic | 65.0% | |
CTGTAAGATCCCGCCGGAGC+AGG | - | chr3_1:85552315-85552334 | Msa0382800:intron | 65.0% | |
TGGGAGAACTCCTGCTCCGG+CGG | + | chr3_1:85552328-85552347 | None:intergenic | 65.0% | |
CCTCACAGGAGACCGGGAAG+GGG | + | chr3_1:85552885-85552904 | None:intergenic | 65.0% | |
GACCTCACAGGAGACCGGGA+AGG | + | chr3_1:85552887-85552906 | None:intergenic | 65.0% | |
GGAGGAGTTCTTCCCCGTGG+TGG | + | chr3_1:85553072-85553091 | None:intergenic | 65.0% | |
!! | CGTGGGCTGGGCGAAACAGA+TGG | + | chr3_1:85553297-85553316 | None:intergenic | 65.0% |
!! | GGGGGAAGTGCTCCGAACTG+GGG | + | chr3_1:85553370-85553389 | None:intergenic | 65.0% |
!! | CGGGGGAAGTGCTCCGAACT+GGG | + | chr3_1:85553371-85553390 | None:intergenic | 65.0% |
!! | TCGGGGGAAGTGCTCCGAAC+TGG | + | chr3_1:85553372-85553391 | None:intergenic | 65.0% |
AGAGGGGCGAGATCGATCGG+GGG | + | chr3_1:85553388-85553407 | None:intergenic | 65.0% | |
GAGAGGGGCGAGATCGATCG+GGG | + | chr3_1:85553389-85553408 | None:intergenic | 65.0% | |
GGAGAGGGGCGAGATCGATC+GGG | + | chr3_1:85553390-85553409 | None:intergenic | 65.0% | |
TCGCATCCTCGCGCGCGCTA+CGG | + | chr3_1:85546900-85546919 | None:intergenic | 70.0% | |
CGGTGCACAGAGCGTGGCGT+TGG | - | chr3_1:85546966-85546985 | Msa0382800:three_prime_UTR | 70.0% | |
GCATCGGAAGGAGCCCGGTG+AGG | - | chr3_1:85552222-85552241 | Msa0382800:CDS | 70.0% | |
AGCCCGGTGAGGGGCAGGAA+GGG | - | chr3_1:85552233-85552252 | Msa0382800:CDS | 70.0% | |
TCCCCTTCCTGCCCCTCACC+GGG | + | chr3_1:85552238-85552257 | None:intergenic | 70.0% | |
CTCCCCTTCCTGCCCCTCAC+CGG | + | chr3_1:85552239-85552258 | None:intergenic | 70.0% | |
GGGAGAACTCCTGCTCCGGC+GGG | + | chr3_1:85552327-85552346 | None:intergenic | 70.0% | |
CCCCTTCCCGGTCTCCTGTG+AGG | - | chr3_1:85552882-85552901 | Msa0382800:intron | 70.0% | |
CGAGCTCGGTAGCGTGGGCT+GGG | + | chr3_1:85553309-85553328 | None:intergenic | 70.0% | |
TCGAGCTCGGTAGCGTGGGC+TGG | + | chr3_1:85553310-85553329 | None:intergenic | 70.0% | |
GAAGGAGCCCGGTGAGGGGC+AGG | - | chr3_1:85552228-85552247 | Msa0382800:CDS | 75.0% | |
GAGCCCGGTGAGGGGCAGGA+AGG | - | chr3_1:85552232-85552251 | Msa0382800:CDS | 75.0% | |
GCCCGGTGAGGGGCAGGAAG+GGG | - | chr3_1:85552234-85552253 | Msa0382800:CDS | 75.0% | |
! | GCGGCACCGTAGCGCGCGCG+AGG | - | chr3_1:85546891-85546910 | Msa0382800:three_prime_UTR | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 85546569 | 85554037 | 85546569 | ID=Msa0382800;Name=Msa0382800 |
chr3_1 | mRNA | 85546569 | 85554037 | 85546569 | ID=Msa0382800-mRNA-1;Parent=Msa0382800;Name=Msa0382800-mRNA-1;_AED=0.11;_eAED=0.11;_QI=260|0.84|0.85|1|0.76|0.78|14|444|839 |
chr3_1 | exon | 85546569 | 85547334 | 85546569 | ID=Msa0382800-mRNA-1:exon:22442;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85547512 | 85547580 | 85547512 | ID=Msa0382800-mRNA-1:exon:22441;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85547667 | 85548632 | 85547667 | ID=Msa0382800-mRNA-1:exon:22440;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85548712 | 85548916 | 85548712 | ID=Msa0382800-mRNA-1:exon:22439;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85549086 | 85549192 | 85549086 | ID=Msa0382800-mRNA-1:exon:22438;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85550207 | 85550411 | 85550207 | ID=Msa0382800-mRNA-1:exon:22437;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85550421 | 85550564 | 85550421 | ID=Msa0382800-mRNA-1:exon:22436;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85550783 | 85550910 | 85550783 | ID=Msa0382800-mRNA-1:exon:22435;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85551029 | 85551146 | 85551029 | ID=Msa0382800-mRNA-1:exon:22434;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85551835 | 85551859 | 85551835 | ID=Msa0382800-mRNA-1:exon:22433;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85552193 | 85552281 | 85552193 | ID=Msa0382800-mRNA-1:exon:22432;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85552520 | 85552574 | 85552520 | ID=Msa0382800-mRNA-1:exon:22431;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85552658 | 85552748 | 85552658 | ID=Msa0382800-mRNA-1:exon:22430;Parent=Msa0382800-mRNA-1 |
chr3_1 | exon | 85553782 | 85554037 | 85553782 | ID=Msa0382800-mRNA-1:exon:22429;Parent=Msa0382800-mRNA-1 |
chr3_1 | five_prime_UTR | 85553782 | 85554037 | 85553782 | ID=Msa0382800-mRNA-1:five_prime_utr;Parent=Msa0382800-mRNA-1 |
chr3_1 | five_prime_UTR | 85552745 | 85552748 | 85552745 | ID=Msa0382800-mRNA-1:five_prime_utr;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85552658 | 85552744 | 85552658 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85552520 | 85552574 | 85552520 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85552193 | 85552281 | 85552193 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85551835 | 85551859 | 85551835 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85551029 | 85551146 | 85551029 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85550783 | 85550910 | 85550783 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85550421 | 85550564 | 85550421 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85550207 | 85550411 | 85550207 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85549086 | 85549192 | 85549086 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85548712 | 85548916 | 85548712 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85547667 | 85548632 | 85547667 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85547512 | 85547580 | 85547512 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | CDS | 85547013 | 85547334 | 85547013 | ID=Msa0382800-mRNA-1:cds;Parent=Msa0382800-mRNA-1 |
chr3_1 | three_prime_UTR | 85546569 | 85547012 | 85546569 | ID=Msa0382800-mRNA-1:three_prime_utr;Parent=Msa0382800-mRNA-1 |
Gene Sequence |
Protein sequence |