Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1362260 | TKY58158.1 | 60.304 | 854 | 223 | 22 | 6 | 749 | 3 | 850 | 0.0 | 706 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1362260 | sp|Q8RWY7|CYP95_ARATH | 62.428 | 173 | 60 | 1 | 6 | 173 | 3 | 175 | 1.56e-66 | 241 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1362260 | A0A0R0GCC6 | 61.782 | 853 | 243 | 23 | 6 | 781 | 3 | 849 | 0.0 | 670 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1321200 | Msa1362260 | 0.824820 | 6.561525e-54 | -8.615850e-47 |
Msa0382800 | Msa1362260 | 0.974905 | 5.491330e-139 | -8.615850e-47 |
Msa0525030 | Msa1362260 | 0.969854 | 9.743353e-131 | -8.615850e-47 |
Msa0525060 | Msa1362260 | 0.822242 | 2.631171e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1362260 | MtrunA17_Chr3g0138061 | 91.966 | 585 | 15 | 2 | 311 | 871 | 319 | 895 | 0.0 | 660 |
Msa1362260 | MtrunA17_Chr1g0149061 | 55.656 | 884 | 256 | 19 | 6 | 868 | 3 | 771 | 0.0 | 603 |
Msa1362260 | MtrunA17_Chr7g0260441 | 50.289 | 173 | 75 | 2 | 8 | 172 | 5 | 174 | 3.79e-53 | 196 |
Msa1362260 | MtrunA17_Chr7g0260441 | 40.441 | 272 | 99 | 9 | 636 | 871 | 407 | 651 | 1.45e-21 | 100 |
Msa1362260 | MtrunA17_Chr4g0038431 | 43.023 | 172 | 86 | 3 | 9 | 172 | 3 | 170 | 7.33e-37 | 136 |
Msa1362260 | MtrunA17_Chr4g0045321 | 41.935 | 186 | 94 | 4 | 12 | 186 | 6 | 188 | 2.42e-36 | 141 |
Msa1362260 | MtrunA17_Chr7g0274841 | 42.442 | 172 | 87 | 3 | 9 | 172 | 3 | 170 | 4.90e-33 | 125 |
Msa1362260 | MtrunA17_Chr3g0104751 | 43.787 | 169 | 83 | 3 | 12 | 172 | 36 | 200 | 1.38e-32 | 125 |
Msa1362260 | MtrunA17_Chr3g0145501 | 42.353 | 170 | 92 | 2 | 12 | 176 | 14 | 182 | 2.18e-32 | 124 |
Msa1362260 | MtrunA17_Chr8g0374621 | 41.053 | 190 | 96 | 5 | 9 | 186 | 3 | 188 | 5.30e-32 | 128 |
Msa1362260 | MtrunA17_Chr3g0113441 | 43.931 | 173 | 77 | 3 | 12 | 172 | 66 | 230 | 5.36e-32 | 124 |
Msa1362260 | MtrunA17_Chr8g0353571 | 40.449 | 178 | 90 | 5 | 5 | 172 | 13 | 184 | 3.96e-31 | 120 |
Msa1362260 | MtrunA17_Chr7g0270991 | 37.079 | 178 | 86 | 4 | 12 | 177 | 98 | 261 | 7.30e-27 | 110 |
Msa1362260 | MtrunA17_Chr1g0193711 | 38.150 | 173 | 92 | 3 | 12 | 177 | 87 | 251 | 1.02e-26 | 110 |
Msa1362260 | MtrunA17_Chr4g0037281 | 38.690 | 168 | 95 | 4 | 12 | 172 | 48 | 214 | 3.62e-22 | 96.3 |
Msa1362260 | MtrunA17_Chr1g0213971 | 37.209 | 172 | 89 | 5 | 12 | 173 | 79 | 241 | 7.82e-22 | 95.5 |
Msa1362260 | MtrunA17_Chr8g0351571 | 31.852 | 135 | 64 | 3 | 29 | 152 | 15 | 132 | 8.22e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1362260 | AT4G32420.1 | 62.428 | 173 | 60 | 1 | 6 | 173 | 3 | 175 | 1.59e-67 | 241 |
Msa1362260 | AT4G32420.5 | 62.428 | 173 | 60 | 1 | 6 | 173 | 3 | 175 | 1.59e-67 | 241 |
Msa1362260 | AT4G32420.3 | 62.428 | 173 | 60 | 1 | 6 | 173 | 3 | 175 | 1.59e-67 | 241 |
Msa1362260 | AT4G32420.6 | 62.428 | 173 | 60 | 1 | 6 | 173 | 3 | 175 | 1.59e-67 | 241 |
Msa1362260 | AT4G32420.4 | 60.759 | 158 | 57 | 1 | 6 | 158 | 3 | 160 | 5.18e-58 | 214 |
Msa1362260 | AT3G63400.2 | 52.247 | 178 | 74 | 2 | 6 | 175 | 3 | 177 | 2.40e-54 | 194 |
Msa1362260 | AT3G63400.3 | 52.247 | 178 | 74 | 2 | 6 | 175 | 3 | 177 | 8.54e-54 | 197 |
Msa1362260 | AT3G63400.3 | 38.034 | 234 | 89 | 11 | 654 | 863 | 369 | 570 | 2.03e-11 | 68.2 |
Msa1362260 | AT3G63400.4 | 52.247 | 178 | 74 | 2 | 6 | 175 | 3 | 177 | 8.54e-54 | 197 |
Msa1362260 | AT3G63400.4 | 38.034 | 234 | 89 | 11 | 654 | 863 | 369 | 570 | 2.03e-11 | 68.2 |
Msa1362260 | AT3G63400.1 | 52.247 | 178 | 74 | 2 | 6 | 175 | 3 | 177 | 8.54e-54 | 197 |
Msa1362260 | AT3G63400.1 | 38.034 | 234 | 89 | 11 | 654 | 863 | 369 | 570 | 2.03e-11 | 68.2 |
Msa1362260 | AT3G56070.1 | 46.154 | 169 | 85 | 2 | 9 | 172 | 3 | 170 | 2.86e-38 | 141 |
Msa1362260 | AT3G56070.2 | 46.154 | 169 | 85 | 2 | 9 | 172 | 3 | 170 | 2.86e-38 | 141 |
Msa1362260 | AT4G38740.1 | 46.746 | 169 | 82 | 4 | 10 | 172 | 4 | 170 | 1.04e-37 | 139 |
Msa1362260 | AT2G21130.1 | 44.509 | 173 | 82 | 5 | 9 | 172 | 4 | 171 | 1.57e-36 | 136 |
Msa1362260 | AT2G16600.1 | 44.379 | 169 | 88 | 2 | 9 | 172 | 4 | 171 | 1.74e-35 | 133 |
Msa1362260 | AT2G15790.1 | 44.118 | 170 | 83 | 3 | 12 | 172 | 6 | 172 | 5.22e-35 | 137 |
Msa1362260 | AT4G34870.1 | 42.442 | 172 | 87 | 3 | 9 | 172 | 3 | 170 | 7.23e-35 | 131 |
Msa1362260 | AT5G58710.1 | 43.787 | 169 | 83 | 3 | 12 | 172 | 37 | 201 | 1.70e-34 | 131 |
Msa1362260 | AT3G55920.1 | 40.828 | 169 | 88 | 3 | 12 | 172 | 61 | 225 | 2.17e-32 | 126 |
Msa1362260 | AT2G38730.1 | 42.857 | 175 | 90 | 4 | 5 | 172 | 27 | 198 | 8.96e-32 | 123 |
Msa1362260 | AT2G29960.1 | 43.195 | 169 | 84 | 3 | 12 | 172 | 34 | 198 | 3.41e-31 | 121 |
Msa1362260 | AT2G29960.3 | 43.195 | 169 | 84 | 3 | 12 | 172 | 34 | 198 | 3.41e-31 | 121 |
Msa1362260 | AT2G16600.2 | 40.854 | 164 | 79 | 3 | 9 | 172 | 4 | 149 | 8.51e-30 | 115 |
Msa1362260 | AT3G22920.1 | 47.059 | 153 | 61 | 7 | 9 | 152 | 3 | 144 | 5.38e-29 | 116 |
Msa1362260 | AT3G62030.1 | 40.411 | 146 | 74 | 2 | 12 | 152 | 97 | 234 | 4.82e-27 | 111 |
Msa1362260 | AT3G62030.3 | 40.411 | 146 | 74 | 2 | 12 | 152 | 96 | 233 | 5.64e-27 | 111 |
Msa1362260 | AT3G62030.2 | 39.726 | 146 | 75 | 2 | 12 | 152 | 150 | 287 | 8.95e-26 | 109 |
Msa1362260 | AT2G29960.2 | 40.237 | 169 | 79 | 4 | 12 | 172 | 34 | 188 | 1.58e-25 | 105 |
Msa1362260 | AT5G13120.1 | 36.842 | 171 | 89 | 5 | 12 | 172 | 92 | 253 | 1.91e-24 | 103 |
Msa1362260 | AT5G13120.2 | 36.842 | 171 | 89 | 5 | 12 | 172 | 88 | 249 | 3.74e-24 | 103 |
Msa1362260 | AT4G34960.1 | 36.913 | 149 | 82 | 3 | 12 | 152 | 49 | 193 | 2.83e-23 | 99.8 |
Msa1362260 | AT4G32420.2 | 64.615 | 65 | 23 | 0 | 109 | 173 | 1 | 65 | 3.71e-23 | 105 |
Msa1362260 | AT4G34960.2 | 40.496 | 121 | 60 | 3 | 12 | 124 | 49 | 165 | 2.72e-19 | 86.7 |
Msa1362260 | AT1G01940.1 | 32.558 | 129 | 71 | 2 | 29 | 152 | 15 | 132 | 1.51e-11 | 63.9 |
Find 266 sgRNAs with CRISPR-Local
Find 586 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGAGCTTGGCTTCAATTT+TGG | 0.135990 | tig0017749:-394 | Msa1362260:three_prime_UTR |
CTGCTCCGGCGGGATCTTAC+AGG | 0.147945 | tig0017749:+1787 | Msa1362260:intergenic |
CGACTTAAGCTCTTCCTTAA+TGG | 0.164360 | tig0017749:+1577 | Msa1362260:intergenic |
TTCTTGGTCCCCTATGGTTT+TGG | 0.176501 | tig0017749:-434 | Msa1362260:three_prime_UTR |
AAAGAATCCGCTGGTGTTTA+TGG | 0.176936 | tig0017749:-6220 | Msa1362260:CDS |
CTCTTTCTTGACACTCTTAC+AGG | 0.202131 | tig0017749:+1442 | Msa1362260:intergenic |
CTCTTTCTTGACACTCTTAC+AGG | 0.202131 | tig0017749:+1514 | Msa1362260:intergenic |
CTCTTTCTTGACACTCTTAC+AGG | 0.202131 | tig0017749:+1685 | Msa1362260:intergenic |
GAGTTGAATTTATAAAATTT+TGG | 0.220857 | tig0017749:-136 | Msa1362260:three_prime_UTR |
TGCAGGAAATATATAGTCTT+TGG | 0.237460 | tig0017749:-4411 | Msa1362260:intron |
CTTCTGCTTAAGCTTCTTGC+AGG | 0.253683 | tig0017749:+1466 | Msa1362260:intergenic |
CTTCTGCTTAAGCTTCTTGC+AGG | 0.253683 | tig0017749:+1637 | Msa1362260:intergenic |
ACGTTTATATTTATCTTTCT+TGG | 0.254704 | tig0017749:+3798 | Msa1362260:intergenic |
GGTAGAGTTATTGCGGTATT+TGG | 0.295393 | tig0017749:-224 | Msa1362260:three_prime_UTR |
AAGACAGTACTTGTGAAATT+AGG | 0.304276 | tig0017749:-260 | Msa1362260:three_prime_UTR |
GTGGGTGAGATTTGATGTTT+AGG | 0.317750 | tig0017749:+7425 | Msa1362260:intergenic |
GCCCGGTGAGGGGCAGGAAG+GGG | 0.325208 | tig0017749:-1867 | Msa1362260:CDS |
CTTCTGCTTAAGCTTCTTGC+AGG | 0.337354 | tig0017749:+1709 | Msa1362260:intergenic |
ACATAAGTCGCAGTCCATTA+AGG | 0.337448 | tig0017749:-1591 | Msa1362260:CDS |
CTTCTTGCAGGCGCTCTAAC+TGG | 0.340410 | tig0017749:+1478 | Msa1362260:intergenic |
CTTCTTGCAGGCGCTCTAAC+TGG | 0.340410 | tig0017749:+1649 | Msa1362260:intergenic |
CTTCTGCTTAAGCTTCTTGC+AGG | 0.342699 | tig0017749:+1538 | Msa1362260:intergenic |
TGGGTGAGATTTGATGTTTA+GGG | 0.342786 | tig0017749:+7426 | Msa1362260:intergenic |
CTCTTACTCATGGGTCGCTT+AGG | 0.348761 | tig0017749:+2111 | Msa1362260:intergenic |
TGACGTGATGGATGTTCATT+TGG | 0.349070 | tig0017749:-2239 | Msa1362260:CDS |
CTCCCCTTCCTGCCCCTCAC+CGG | 0.353362 | tig0017749:+1865 | Msa1362260:intergenic |
CGAACCAAATGGATTGGGCT+TGG | 0.359092 | tig0017749:+7465 | Msa1362260:intergenic |
CTTCTGCTTAAGCTTCTTGC+AGG | 0.362875 | tig0017749:+1394 | Msa1362260:intergenic |
TTGCTTAATGCTGGAATTTG+TGG | 0.364426 | tig0017749:-355 | Msa1362260:three_prime_UTR |
CTTCTTGCAGGCGATCTAAC+TGG | 0.367082 | tig0017749:+1550 | Msa1362260:intergenic |
ACCGAAATCTAAATATTAAC+CGG | 0.369009 | tig0017749:-15 | Msa1362260:three_prime_UTR |
GCAGGAAATATATAGTCTTT+GGG | 0.369627 | tig0017749:-4410 | Msa1362260:intron |
ATAATCGCCGCAGTTATTCT+AGG | 0.375773 | tig0017749:-1309 | Msa1362260:CDS |
TCGGCTAATGCTTCTCTTTG+AGG | 0.379951 | tig0017749:+1357 | Msa1362260:intergenic |
CGGGCCAAAGGTGAAATTCT+TGG | 0.382916 | tig0017749:-450 | Msa1362260:exon |
CCTTCTGCTTTGCTTAATGC+TGG | 0.389464 | tig0017749:-364 | Msa1362260:three_prime_UTR |
CGGCTAATGCTTCTCTTTGA+GGG | 0.390083 | tig0017749:+1358 | Msa1362260:intergenic |
AGATTCAGACATGGAATCTT+CGG | 0.391915 | tig0017749:-3908 | Msa1362260:CDS |
GTGGATATTCTTACAGTTAC+CGG | 0.392368 | tig0017749:+7286 | Msa1362260:intergenic |
GAGGCTTGTTGAAGGGCTTA+AGG | 0.393340 | tig0017749:-4388 | Msa1362260:CDS |
CTCTTCCTTTCTATGATGAA+TGG | 0.395839 | tig0017749:+2369 | Msa1362260:intergenic |
TCCCCTTCCTGCCCCTCACC+GGG | 0.399388 | tig0017749:+1866 | Msa1362260:intergenic |
CAATCCAAGCCCAATCCATT+TGG | 0.400605 | tig0017749:-7469 | Msa1362260:five_prime_UTR |
GAAGGAGCCCGGTGAGGGGC+AGG | 0.401536 | tig0017749:-1873 | Msa1362260:CDS |
TTTATGGATGTATCTATTGA+TGG | 0.403476 | tig0017749:-6204 | Msa1362260:CDS |
AGGCTAAAGCATGATGGCCC+TGG | 0.405592 | tig0017749:-4631 | Msa1362260:CDS |
GAAGGTATAGAACCCCTTCC+CGG | 0.409280 | tig0017749:-1159 | Msa1362260:CDS |
CTTCTTGCAGGTGATCTAAC+TGG | 0.410400 | tig0017749:+1406 | Msa1362260:intergenic |
CTTCTTGCAGGTGATCTAAC+TGG | 0.410400 | tig0017749:+1721 | Msa1362260:intergenic |
CTTCCCCTTCTGATACGCTT+TGG | 0.410700 | tig0017749:+1211 | Msa1362260:intergenic |
GATCGAAGCGCAGATCAAAA+AGG | 0.414608 | tig0017749:-3723 | Msa1362260:intron |
TTCACTTCTGTCAGATCTAT+AGG | 0.414935 | tig0017749:+2273 | Msa1362260:intergenic |
CTCCTGCCGATGCTCCTAAC+AGG | 0.415459 | tig0017749:+1937 | Msa1362260:intergenic |
GCTCTTTCGTGATGATACTC+TGG | 0.416616 | tig0017749:+1756 | Msa1362260:intergenic |
AGCCCGGTGAGGGGCAGGAA+GGG | 0.416897 | tig0017749:-1868 | Msa1362260:CDS |
GAGATAAACGCCGTGACAAA+AGG | 0.418043 | tig0017749:-3765 | Msa1362260:CDS |
CTCTAACTACTTTGTGATGC+AGG | 0.420031 | tig0017749:+7385 | Msa1362260:intergenic |
TTCGCATTCGCTCCCCAGTT+CGG | 0.421685 | tig0017749:-675 | Msa1362260:CDS |
GTCTTTGGGAGGCTTGTTGA+AGG | 0.421721 | tig0017749:-4396 | Msa1362260:CDS |
GCAGGAGTCCAGTGAAATCT+AGG | 0.423588 | tig0017749:-588 | Msa1362260:CDS |
GCATGGACAGGAGTCCTGTT+AGG | 0.427265 | tig0017749:-1951 | Msa1362260:CDS |
GTGAAATTCTTGGTCCCCTA+TGG | 0.428064 | tig0017749:-440 | Msa1362260:exon |
ATACGCTTTGGCGAAGCATC+AGG | 0.429053 | tig0017749:+1223 | Msa1362260:intergenic |
TTTGTGATGCAGGGGCAAAA+TGG | 0.430771 | tig0017749:+7395 | Msa1362260:intergenic |
ATTGCGGTATTTGGTGGAAC+TGG | 0.436002 | tig0017749:-215 | Msa1362260:three_prime_UTR |
CTCCTGTCAATGCTTCTAAC+AGG | 0.436698 | tig0017749:+1913 | Msa1362260:intergenic |
TCTTACTCATGGGTCGCTTA+GGG | 0.437154 | tig0017749:+2112 | Msa1362260:intergenic |
TGGAAAATTGCTTCACTACA+AGG | 0.439812 | tig0017749:-5752 | Msa1362260:CDS |
AGAGGTATCAGTTCAAATAC+TGG | 0.441968 | tig0017749:-5772 | Msa1362260:CDS |
TTTCACAAAGTGTAATAAGT+TGG | 0.442260 | tig0017749:+7519 | Msa1362260:intergenic |
GTTTCCGAACCAAATGGATT+GGG | 0.444039 | tig0017749:+7460 | Msa1362260:intergenic |
ACTGCGGCGATTATTTCTAC+TGG | 0.445667 | tig0017749:+1318 | Msa1362260:intergenic |
CAATCCATTTGGTTCGGAAA+CGG | 0.445953 | tig0017749:-7458 | Msa1362260:five_prime_UTR |
CGTTTCCGAACCAAATGGAT+TGG | 0.447431 | tig0017749:+7459 | Msa1362260:intergenic |
CAGGGAATCTGGCAGTGATT+CGG | 0.448057 | tig0017749:-2690 | Msa1362260:CDS |
CAAATGGATTGGGCTTGGAT+TGG | 0.450097 | tig0017749:+7470 | Msa1362260:intergenic |
ATGTTCATTTGGGCAAATCT+AGG | 0.455955 | tig0017749:-2228 | Msa1362260:intron |
CTGTAAGATCCCGCCGGAGC+AGG | 0.457333 | tig0017749:-1786 | Msa1362260:CDS |
CAAGCCCAATCCATTTGGTT+CGG | 0.459273 | tig0017749:-7464 | Msa1362260:five_prime_UTR |
GAAGCATTGACAGGAGTCCT+AGG | 0.459358 | tig0017749:-1906 | Msa1362260:CDS |
TGACAAAAGGCGAAGAAGAC+GGG | 0.459409 | tig0017749:-3752 | Msa1362260:CDS |
GCATTAGCCGAAGTCCTGTC+AGG | 0.459752 | tig0017749:-1345 | Msa1362260:CDS |
AGAAGCTTAAGCAGAAGCTC+TGG | 0.459949 | tig0017749:-1388 | Msa1362260:CDS |
CGGCGATGGTTCTCCTGACT+CGG | 0.465118 | tig0017749:-470 | Msa1362260:CDS |
TGGGAGAACTCCTGCTCCGG+CGG | 0.467758 | tig0017749:+1776 | Msa1362260:intergenic |
TGAAAGTCTTGATACTCAAC+AGG | 0.468987 | tig0017749:-2639 | Msa1362260:CDS |
TTCAAGATTATTGCCTTCAC+AGG | 0.470401 | tig0017749:+4017 | Msa1362260:intergenic |
GAGCCCGGTGAGGGGCAGGA+AGG | 0.470848 | tig0017749:-1869 | Msa1362260:CDS |
ACAAAGTGTAATAAGTTGGT+TGG | 0.475950 | tig0017749:+7523 | Msa1362260:intergenic |
TTTCTACTGGGTGCCCTGAC+AGG | 0.478432 | tig0017749:+1331 | Msa1362260:intergenic |
AAATTTGACTAGTAAGATGA+AGG | 0.479707 | tig0017749:-6256 | Msa1362260:intron |
ATTTGGTGGAACTGGAGTTA+AGG | 0.481138 | tig0017749:-207 | Msa1362260:three_prime_UTR |
TTCTTCCATCATATTATGAA+AGG | 0.484365 | tig0017749:-5724 | Msa1362260:CDS |
AAGCTGATCACCATCTTGAC+AGG | 0.485234 | tig0017749:-4546 | Msa1362260:intron |
CGTTAAAAGAATGGTCTTTG+AGG | 0.489222 | tig0017749:-6175 | Msa1362260:intron |
CGTCACAGGAAACATGCAAA+TGG | 0.489647 | tig0017749:+5182 | Msa1362260:intergenic |
GGGAGAACTCCTGCTCCGGC+GGG | 0.492496 | tig0017749:+1777 | Msa1362260:intergenic |
AATTTCCGTGCATTATGTAC+AGG | 0.493844 | tig0017749:-6037 | Msa1362260:intron |
GAGGGGCAGGAAGGGGAGAA+AGG | 0.494520 | tig0017749:-1860 | Msa1362260:CDS |
AGAGTATGAGTATTAGTCCT+AGG | 0.495161 | tig0017749:-2092 | Msa1362260:CDS |
AAAGGCATTCGTCGTACTCC+CGG | 0.498519 | tig0017749:-612 | Msa1362260:CDS |
AATACTCATACTCTTACTCA+TGG | 0.498982 | tig0017749:+2101 | Msa1362260:intergenic |
AGAGTTATTGCGGTATTTGG+TGG | 0.501527 | tig0017749:-221 | Msa1362260:three_prime_UTR |
GGCTAAAGCATGATGGCCCT+GGG | 0.504941 | tig0017749:-4630 | Msa1362260:CDS |
GGTGTTCTTCTCCTACGTAC+AGG | 0.505441 | tig0017749:+1277 | Msa1362260:intergenic |
GAGCGGCATAGCAATGGTAC+TGG | 0.505926 | tig0017749:-2301 | Msa1362260:CDS |
CTTCAAAAGACAGAAGGAAA+AGG | 0.507312 | tig0017749:-3966 | Msa1362260:CDS |
ACCTCACAGGAGACCGGGAA+GGG | 0.507446 | tig0017749:+1146 | Msa1362260:intergenic |
TTTGTTGCCTGCCATGTCCT+CGG | 0.508598 | tig0017749:-173 | Msa1362260:three_prime_UTR |
ATGGAAGAATTGATCGTGAC+AGG | 0.512263 | tig0017749:-1111 | Msa1362260:intron |
AAATGAACATCCATCACGTC+AGG | 0.512817 | tig0017749:+2241 | Msa1362260:intergenic |
AACCCCGCCGTTAAAACCAC+TGG | 0.512962 | tig0017749:-7349 | Msa1362260:five_prime_UTR |
CTCCTTCCGATGCTTCTCCT+AGG | 0.513131 | tig0017749:+1889 | Msa1362260:intergenic |
ATTCGTCGTACTCCCGGAGC+AGG | 0.513917 | tig0017749:-606 | Msa1362260:CDS |
TTGCATGTTTCCTGTGACGA+TGG | 0.514301 | tig0017749:-5178 | Msa1362260:intron |
GTATTAGTCCTAGGAGGAGT+AGG | 0.516856 | tig0017749:-2083 | Msa1362260:CDS |
TTGAAGAAAATCGAAGATGT+TGG | 0.517732 | tig0017749:-4363 | Msa1362260:CDS |
TGCTCCGGCGGGATCTTACA+GGG | 0.517890 | tig0017749:+1788 | Msa1362260:intergenic |
TAATCTTGAAACACGGAGGA+AGG | 0.518485 | tig0017749:-4004 | Msa1362260:CDS |
GACGTGATGGATGTTCATTT+GGG | 0.518530 | tig0017749:-2238 | Msa1362260:CDS |
CTCCTGTCCATGCTTCTGAC+AGG | 0.518835 | tig0017749:+1961 | Msa1362260:intergenic |
TCCTTTCTATGATGAATGGT+GGG | 0.519261 | tig0017749:+2373 | Msa1362260:intergenic |
GTGGACTTCTGAAACGCCTA+GGG | 0.519991 | tig0017749:+979 | Msa1362260:intergenic |
AGGGCCGTTTCCGAACCAAA+TGG | 0.520608 | tig0017749:+7454 | Msa1362260:intergenic |
GATCAATTCTTCCATTGTAT+CGG | 0.521886 | tig0017749:+1119 | Msa1362260:intergenic |
GGGCAAAATGGCAGTGCAGT+GGG | 0.522760 | tig0017749:+7407 | Msa1362260:intergenic |
CTTCTCCTACGTACAGGGCT+AGG | 0.523768 | tig0017749:+1283 | Msa1362260:intergenic |
CTGCGGCGATTATTTCTACT+GGG | 0.525700 | tig0017749:+1319 | Msa1362260:intergenic |
TCTTTGGGAGGCTTGTTGAA+GGG | 0.527658 | tig0017749:-4395 | Msa1362260:CDS |
ATTGCCATTGACAAAAGCCC+AGG | 0.528592 | tig0017749:+4613 | Msa1362260:intergenic |
CTCTTGCTCCTACTCCTCCT+AGG | 0.529950 | tig0017749:+2075 | Msa1362260:intergenic |
AAACCACTGGAAAACGCTGC+CGG | 0.532125 | tig0017749:-7336 | Msa1362260:five_prime_UTR |
CTTCCTACGACGAAGAAGTC+CGG | 0.532825 | tig0017749:+7317 | Msa1362260:intergenic |
CGGACTTCTTCGTCGTAGGA+AGG | 0.535117 | tig0017749:-7316 | Msa1362260:five_prime_UTR |
GAAGCCCTCCTCGTCTATCA+AGG | 0.536306 | tig0017749:-2002 | Msa1362260:CDS |
ATTGCTGACCGTGATAAGCT+TGG | 0.537866 | tig0017749:-4592 | Msa1362260:CDS |
AAAGAAATTACCATCGTCAC+AGG | 0.538271 | tig0017749:+5168 | Msa1362260:intergenic |
GCCCCTCTCCTCGTGTAGAA+AGG | 0.538337 | tig0017749:-630 | Msa1362260:CDS |
AGGAGTCCTAGGAGAAGCAT+CGG | 0.541324 | tig0017749:-1895 | Msa1362260:CDS |
TTATGGATGTATCTATTGAT+GGG | 0.542854 | tig0017749:-6203 | Msa1362260:CDS |
GGTATGACCTCACAGGAGAC+CGG | 0.543083 | tig0017749:+1140 | Msa1362260:intergenic |
GTTCTCCTGACTCGGGCCAA+AGG | 0.543507 | tig0017749:-462 | Msa1362260:CDS |
GAATAGCAAACCTGTCAAGA+TGG | 0.543791 | tig0017749:+4536 | Msa1362260:intergenic |
TTCCTTTCTATGATGAATGG+TGG | 0.545350 | tig0017749:+2372 | Msa1362260:intergenic |
GGCTAATGCTTCTCTTTGAG+GGG | 0.546019 | tig0017749:+1359 | Msa1362260:intergenic |
AGGAGTCCTGTTAGGAGCAT+CGG | 0.546318 | tig0017749:-1943 | Msa1362260:CDS |
AAGAGAGGCTTGGTCTCATA+CGG | 0.546509 | tig0017749:-490 | Msa1362260:CDS |
TAACTGTGGTGAATATAATG+AGG | 0.546907 | tig0017749:-4301 | Msa1362260:CDS |
GAGAAGCATCGGAAGGAGCC+CGG | 0.548445 | tig0017749:-1884 | Msa1362260:CDS |
CACGAAAAGCAAGTAGAGAC+AGG | 0.548672 | tig0017749:-543 | Msa1362260:CDS |
AGAAGCCCAGATGGAAAGAG+AGG | 0.548943 | tig0017749:-505 | Msa1362260:CDS |
GTCCTGTCAGAAGCATGGAC+AGG | 0.549338 | tig0017749:-1963 | Msa1362260:CDS |
CAGTCTTGGGAGCAACATCA+TGG | 0.552540 | tig0017749:+6065 | Msa1362260:intergenic |
GGTTCTATACCTTCTTGCAT+AGG | 0.552704 | tig0017749:+1168 | Msa1362260:intergenic |
TCTTTCTTGACACTCTTACA+GGG | 0.552977 | tig0017749:+1443 | Msa1362260:intergenic |
TCTTTCTTGACACTCTTACA+GGG | 0.552977 | tig0017749:+1515 | Msa1362260:intergenic |
TCTTTCTTGACACTCTTACA+GGG | 0.552977 | tig0017749:+1686 | Msa1362260:intergenic |
CATCGGAAGGAGCCCGGTGA+GGG | 0.553556 | tig0017749:-1878 | Msa1362260:CDS |
GTCCTCTTAAAAGTGTCAGC+AGG | 0.554156 | tig0017749:-1813 | Msa1362260:CDS |
TCATCATCCAGAAGCCCAGA+TGG | 0.554328 | tig0017749:-514 | Msa1362260:CDS |
TGGAGCCTTTCATAATATGA+TGG | 0.555254 | tig0017749:+5719 | Msa1362260:intergenic |
ACTGAAGTCTCCCTCACTTG+TGG | 0.558048 | tig0017749:-2407 | Msa1362260:CDS |
TGGGGATCCCGTTAAAAGAA+TGG | 0.559512 | tig0017749:-6184 | Msa1362260:CDS |
GTCCTGTTAGAAGCATTGAC+AGG | 0.559536 | tig0017749:-1915 | Msa1362260:CDS |
CTCTGGGAGAACTCCTGCTC+CGG | 0.560219 | tig0017749:+1773 | Msa1362260:intergenic |
TTAAGAGGACGAGTTATCAC+AGG | 0.560252 | tig0017749:+1826 | Msa1362260:intergenic |
GCTTAAGCAGAAGCTCTGGT+AGG | 0.561525 | tig0017749:-1384 | Msa1362260:CDS |
TAAGTTCATCTAGTGATGAC+AGG | 0.561778 | tig0017749:-3840 | Msa1362260:CDS |
AAGCGTATCAGAAGGGGAAG+AGG | 0.562233 | tig0017749:-1208 | Msa1362260:CDS |
GCGTTTCAGAAGTCCACCAC+GGG | 0.562455 | tig0017749:-973 | Msa1362260:CDS |
CCCAGATGGAAAGAGAGGCT+TGG | 0.563233 | tig0017749:-500 | Msa1362260:CDS |
GGTGGACTTCTGAAACGCCT+AGG | 0.563378 | tig0017749:+978 | Msa1362260:intergenic |
GAAGATGTTGGTGATGATGA+AGG | 0.567541 | tig0017749:-4351 | Msa1362260:CDS |
GGAAAATTGCTTCACTACAA+GGG | 0.568821 | tig0017749:-5751 | Msa1362260:CDS |
GGGCCATCATGCTTTAGCCT+AGG | 0.569224 | tig0017749:+4634 | Msa1362260:intergenic |
CATTCATCATAGAAAGGAAG+AGG | 0.571419 | tig0017749:-2368 | Msa1362260:CDS |
AACTGTGGTGAATATAATGA+GGG | 0.572121 | tig0017749:-4300 | Msa1362260:intron |
TCTAACTACTTTGTGATGCA+GGG | 0.573342 | tig0017749:+7386 | Msa1362260:intergenic |
ACCCACCATTCATCATAGAA+AGG | 0.574695 | tig0017749:-2374 | Msa1362260:CDS |
TGCATCTTTCTCCACAAGTG+AGG | 0.574961 | tig0017749:+2396 | Msa1362260:intergenic |
CTCTTTCGTGATGATACTCT+GGG | 0.576218 | tig0017749:+1757 | Msa1362260:intergenic |
GTGTTCTTCTCCTACGTACA+GGG | 0.576951 | tig0017749:+1278 | Msa1362260:intergenic |
GTATGACCTCACAGGAGACC+GGG | 0.578090 | tig0017749:+1141 | Msa1362260:intergenic |
GGGGCAAAATGGCAGTGCAG+TGG | 0.582002 | tig0017749:+7406 | Msa1362260:intergenic |
CATCATAGAAAGGAAGAGGC+GGG | 0.582172 | tig0017749:-2364 | Msa1362260:CDS |
GTCCTGTTAGGAGCATCGGC+AGG | 0.583476 | tig0017749:-1939 | Msa1362260:CDS |
GGAGGAGTTCTTCCCCGTGG+TGG | 0.583960 | tig0017749:+960 | Msa1362260:intergenic |
GGAGGGCTTCTACTGACACT+TGG | 0.584847 | tig0017749:+2015 | Msa1362260:intergenic |
CCTCACAGGAGACCGGGAAG+GGG | 0.586327 | tig0017749:+1147 | Msa1362260:intergenic |
AATGGAGAGCGGCATAGCAA+TGG | 0.587650 | tig0017749:-2307 | Msa1362260:CDS |
CTTAAGCAGAAGCTCTGGTA+GGG | 0.588119 | tig0017749:-1383 | Msa1362260:CDS |
GGCTTGGTCTCATACGGCGA+TGG | 0.588268 | tig0017749:-484 | Msa1362260:CDS |
ATGGAACAAGGCTTGCAACT+CGG | 0.588582 | tig0017749:+5201 | Msa1362260:intergenic |
TGAACTTATATCAGATGATG+AGG | 0.588716 | tig0017749:+3855 | Msa1362260:intergenic |
CCCTGGTGGTAGAGTTATTG+CGG | 0.589657 | tig0017749:-231 | Msa1362260:three_prime_UTR |
AATCTTGAAACACGGAGGAA+GGG | 0.590910 | tig0017749:-4003 | Msa1362260:CDS |
AACGATACTCCTATGCAAGA+AGG | 0.591467 | tig0017749:-1177 | Msa1362260:CDS |
AGAGGTCTTCAAAAGACAGA+AGG | 0.593982 | tig0017749:-3972 | Msa1362260:CDS |
GGAGGAGTAGGAGCAAGAGC+CGG | 0.594418 | tig0017749:-2071 | Msa1362260:CDS |
ATCGGAAGGAGCCCGGTGAG+GGG | 0.598010 | tig0017749:-1877 | Msa1362260:CDS |
CAGTAGTCCTGTCAGAAGCA+TGG | 0.598053 | tig0017749:-1968 | Msa1362260:CDS |
GTTACAGAAGGTATTCCCCT+AGG | 0.598322 | tig0017749:-995 | Msa1362260:CDS |
CTTCGCCAAAGCGTATCAGA+AGG | 0.598505 | tig0017749:-1216 | Msa1362260:CDS |
GTGACAAAAGGCGAAGAAGA+CGG | 0.598727 | tig0017749:-3753 | Msa1362260:CDS |
GGAATATACTTAGGTACCGA+AGG | 0.599526 | tig0017749:-771 | Msa1362260:intron |
GCATCTTTCTCCACAAGTGA+GGG | 0.601008 | tig0017749:+2397 | Msa1362260:intergenic |
AAATACCTGTACATAATGCA+CGG | 0.602204 | tig0017749:+6032 | Msa1362260:intergenic |
GGCGATGGTTCTCCTGACTC+GGG | 0.602378 | tig0017749:-469 | Msa1362260:CDS |
GGAGGAAGGGAAAGCTCAAG+AGG | 0.602515 | tig0017749:-3990 | Msa1362260:CDS |
GGAAAGGATGGAGCCTGTGA+AGG | 0.603085 | tig0017749:-4030 | Msa1362260:CDS |
ATACTCATACTCTTACTCAT+GGG | 0.608612 | tig0017749:+2102 | Msa1362260:intergenic |
GGAAACATGCAAATGGAACA+AGG | 0.609030 | tig0017749:+5189 | Msa1362260:intergenic |
TTCGCCAAAGCGTATCAGAA+GGG | 0.611595 | tig0017749:-1215 | Msa1362260:CDS |
AACTCTCTGATTCAGATGAG+TGG | 0.611686 | tig0017749:+3935 | Msa1362260:intergenic |
TAGGAGAAGAACACCTCGTG+GGG | 0.611922 | tig0017749:-1269 | Msa1362260:CDS |
CCCCTTCCCGGTCTCCTGTG+AGG | 0.613263 | tig0017749:-1147 | Msa1362260:CDS |
TTGTATCGGTATGACCTCAC+AGG | 0.614073 | tig0017749:+1133 | Msa1362260:intergenic |
TCACCTAGGCTAAAGCATGA+TGG | 0.615222 | tig0017749:-4637 | Msa1362260:CDS |
AGAGAGGCAGCCTGACGTGA+TGG | 0.616843 | tig0017749:-2251 | Msa1362260:CDS |
GTCCTAGGAGAAGCATCGGA+AGG | 0.617057 | tig0017749:-1891 | Msa1362260:CDS |
GCAGATATTCAAGTTACAGA+AGG | 0.617887 | tig0017749:-1007 | Msa1362260:intron |
GTGAGGTCATACCGATACAA+TGG | 0.621613 | tig0017749:-1130 | Msa1362260:CDS |
AATGAGAACCAAGCTTATCA+CGG | 0.622461 | tig0017749:+4584 | Msa1362260:intergenic |
TGGGTGCCCTGACAGGACTT+CGG | 0.626508 | tig0017749:+1338 | Msa1362260:intergenic |
GCATCGGAAGGAGCCCGGTG+AGG | 0.628008 | tig0017749:-1879 | Msa1362260:CDS |
TCATCATAGAAAGGAAGAGG+CGG | 0.629322 | tig0017749:-2365 | Msa1362260:CDS |
GACCTCACAGGAGACCGGGA+AGG | 0.634812 | tig0017749:+1145 | Msa1362260:intergenic |
GGAAATATATAGTCTTTGGG+AGG | 0.635579 | tig0017749:-4407 | Msa1362260:CDS |
CTGCCGGACTTCTTCGTCGT+AGG | 0.637165 | tig0017749:-7320 | Msa1362260:five_prime_UTR |
TCGCCAAAGCGTATCAGAAG+GGG | 0.637830 | tig0017749:-1214 | Msa1362260:CDS |
GGAGCCCTGTAAGATCCCGC+CGG | 0.639010 | tig0017749:-1792 | Msa1362260:CDS |
CATTAGCCGAAGTCCTGTCA+GGG | 0.640601 | tig0017749:-1344 | Msa1362260:CDS |
ATATTCTTACAGTTACCGGC+GGG | 0.641497 | tig0017749:+7290 | Msa1362260:intergenic |
GATCTGACAGAAGTGAAGAG+AGG | 0.643642 | tig0017749:-2267 | Msa1362260:CDS |
TATGAAAGGCTCCATCGTGA+AGG | 0.643659 | tig0017749:-5710 | Msa1362260:intron |
GATATTCTTACAGTTACCGG+CGG | 0.648868 | tig0017749:+7289 | Msa1362260:intergenic |
TCCTCCTTGATAGACGAGGA+GGG | 0.654272 | tig0017749:+1998 | Msa1362260:intergenic |
TATGGATGTATCTATTGATG+GGG | 0.655483 | tig0017749:-6202 | Msa1362260:CDS |
CTCCTCCTTGATAGACGAGG+AGG | 0.656822 | tig0017749:+1997 | Msa1362260:intergenic |
GAGTTCTTCAGATTCAGACA+TGG | 0.657506 | tig0017749:-3917 | Msa1362260:intron |
GTATGAGTATTAGTCCTAGG+AGG | 0.658103 | tig0017749:-2089 | Msa1362260:CDS |
CTAACTACTTTGTGATGCAG+GGG | 0.658344 | tig0017749:+7387 | Msa1362260:intergenic |
AAGATGTTGGTGATGATGAA+GGG | 0.659428 | tig0017749:-4350 | Msa1362260:CDS |
TTGCCATTGACAAAAGCCCA+GGG | 0.664370 | tig0017749:+4614 | Msa1362260:intergenic |
GGAGTCCTAGCCCTGTACGT+AGG | 0.664402 | tig0017749:-1288 | Msa1362260:CDS |
GGCGTTTCAGAAGTCCACCA+CGG | 0.667800 | tig0017749:-974 | Msa1362260:CDS |
CACGGGGAAGAACTCCTCCA+AGG | 0.669190 | tig0017749:-956 | Msa1362260:intron |
GTAGGAGAAGAACACCTCGT+GGG | 0.673039 | tig0017749:-1270 | Msa1362260:CDS |
GTCGTAGGAAGGAATCCCGC+CGG | 0.675111 | tig0017749:-7305 | Msa1362260:five_prime_UTR |
CTTGGAGGAGTTCTTCCCCG+TGG | 0.675788 | tig0017749:+957 | Msa1362260:intergenic |
GTGAAATTAGGATATGTCCC+TGG | 0.680375 | tig0017749:-248 | Msa1362260:three_prime_UTR |
AAAACAACATACCTTCACGA+TGG | 0.681325 | tig0017749:+5699 | Msa1362260:intergenic |
ACTGTTAAAATTATTAACTG+TGG | 0.681914 | tig0017749:-4315 | Msa1362260:CDS |
CGTAGGAGAAGAACACCTCG+TGG | 0.694022 | tig0017749:-1271 | Msa1362260:CDS |
AAACTCCTCCTTGATAGACG+AGG | 0.696905 | tig0017749:+1994 | Msa1362260:intergenic |
CTGTAAAGGAAAATGGAGAG+CGG | 0.699194 | tig0017749:-2318 | Msa1362260:CDS |
GCCCTCCTCGTCTATCAAGG+AGG | 0.713771 | tig0017749:-1999 | Msa1362260:CDS |
GCAATAATCTTGAAACACGG+AGG | 0.719606 | tig0017749:-4008 | Msa1362260:CDS |
AAGAAAGATAAATATAAACG+TGG | 0.721369 | tig0017749:-3796 | Msa1362260:CDS |
AAGGCAATAATCTTGAAACA+CGG | 0.721762 | tig0017749:-4011 | Msa1362260:CDS |
GATACATCCATAAACACCAG+CGG | 0.727051 | tig0017749:+6213 | Msa1362260:intergenic |
TAGGACTCCTAGAATAACTG+CGG | 0.729288 | tig0017749:+1302 | Msa1362260:intergenic |
AGGAGAAGAACACCTCGTGG+GGG | 0.741980 | tig0017749:-1268 | Msa1362260:CDS |
CGTTTCAGAAGTCCACCACG+GGG | 0.742381 | tig0017749:-972 | Msa1362260:CDS |
TGGACTTCTGAAACGCCTAG+GGG | 0.751220 | tig0017749:+980 | Msa1362260:intergenic |
AAATTAGGATATGTCCCTGG+TGG | 0.767271 | tig0017749:-245 | Msa1362260:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTCATTTAAATTAATCTAA+GGG | + | tig0017749:1069-1088 | Msa1362260:intergenic | 10.0% |
!! | ATATATTGAAAAATAAAGAA+TGG | + | tig0017749:3434-3453 | Msa1362260:intergenic | 10.0% |
!! | ATTCATTCTAATTAATCTAA+GGG | + | tig0017749:928-947 | Msa1362260:intergenic | 15.0% |
!! | CATTCATTTAAATTAATCTA+AGG | + | tig0017749:1070-1089 | Msa1362260:intergenic | 15.0% |
!! | CTTAGATTAATTTAAATGAA+TGG | - | tig0017749:1068-1087 | Msa1362260:intron | 15.0% |
!! | ATTAATTTAAATGAATGGAT+AGG | - | tig0017749:1073-1092 | Msa1362260:intron | 15.0% |
!! | ATCAAATAATAAAAACACAA+AGG | + | tig0017749:2316-2335 | Msa1362260:intergenic | 15.0% |
!!! | TTTGATTTGATTTAGAAATT+TGG | - | tig0017749:2487-2506 | Msa1362260:intron | 15.0% |
!! | CTTTCAAAAATATAAAAGTA+TGG | + | tig0017749:2584-2603 | Msa1362260:intergenic | 15.0% |
!!! | TTTGCTATTCTAATATTTTT+TGG | - | tig0017749:3025-3044 | Msa1362260:intron | 15.0% |
!! | AATATGAATATTCAAATGAA+GGG | + | tig0017749:3464-3483 | Msa1362260:intergenic | 15.0% |
!! | AAATATGAATATTCAAATGA+AGG | + | tig0017749:3465-3484 | Msa1362260:intergenic | 15.0% |
!! | AACCAATTTCATATAATTAA+AGG | + | tig0017749:4509-4528 | Msa1362260:intergenic | 15.0% |
!! | AAAAAGTAAAAAACTGAATA+AGG | + | tig0017749:4608-4627 | Msa1362260:intergenic | 15.0% |
!!! | TTTTATTGAAAGAAAATTAC+GGG | + | tig0017749:5020-5039 | Msa1362260:intergenic | 15.0% |
!!! | GTTTTATTGAAAGAAAATTA+CGG | + | tig0017749:5021-5040 | Msa1362260:intergenic | 15.0% |
!!! | TTTTTTATAAGTGAAAGAAA+TGG | + | tig0017749:5390-5409 | Msa1362260:intergenic | 15.0% |
!! | ATAATTAAAAATATGGTTCA+AGG | + | tig0017749:6728-6747 | Msa1362260:intergenic | 15.0% |
!! | GCTATCAATAATTAAAAATA+TGG | + | tig0017749:6735-6754 | Msa1362260:intergenic | 15.0% |
!! | GTATATTCCAAATAATTATA+TGG | + | tig0017749:6766-6785 | Msa1362260:intergenic | 15.0% |
!!! | TAATTATTTGGAATATACTT+AGG | - | tig0017749:6768-6787 | Msa1362260:intron | 15.0% |
!!! | GAGTTGAATTTATAAAATTT+TGG | - | tig0017749:7412-7431 | Msa1362260:five_prime_UTR | 15.0% |
!!! | GTTCATTTTAATTAATCCAA+GGG | + | tig0017749:781-800 | Msa1362260:intergenic | 20.0% |
!! | CTTGGATTAATTAAAATGAA+CGG | - | tig0017749:780-799 | Msa1362260:intron | 20.0% |
!!! | TGATTTTACTTAAAATCATC+AGG | + | tig0017749:899-918 | Msa1362260:intergenic | 20.0% |
!! | CATTCATTCTAATTAATCTA+AGG | + | tig0017749:929-948 | Msa1362260:intergenic | 20.0% |
!! | CTTAGATTAATTAGAATGAA+TGG | - | tig0017749:927-946 | Msa1362260:intron | 20.0% |
!!! | CTGTTTTAATATTTGTATCT+CGG | - | tig0017749:1181-1200 | Msa1362260:CDS | 20.0% |
!!! | TTTCTTGTGATATAGTTTTA+AGG | - | tig0017749:2008-2027 | Msa1362260:CDS | 20.0% |
!!! | TGATGTTTTTACTTTTATAC+AGG | - | tig0017749:2171-2190 | Msa1362260:intron | 20.0% |
!!! | GATGTTTTTACTTTTATACA+GGG | - | tig0017749:2172-2191 | Msa1362260:intron | 20.0% |
!!! | AATTTCTTTTCTAAGTCAAT+TGG | - | tig0017749:2394-2413 | Msa1362260:CDS | 20.0% |
!!! | ATTTCTTTTCTAAGTCAATT+GGG | - | tig0017749:2395-2414 | Msa1362260:CDS | 20.0% |
!!! | ATTTGGATTAGTTTTGATAT+TGG | - | tig0017749:2504-2523 | Msa1362260:intron | 20.0% |
!!! | TGATTAAATACCAAATCTTT+TGG | - | tig0017749:2614-2633 | Msa1362260:CDS | 20.0% |
!!! | GATTAAATACCAAATCTTTT+GGG | - | tig0017749:2615-2634 | Msa1362260:CDS | 20.0% |
!! | AAAAGAAAACAACAAATCAA+GGG | + | tig0017749:2700-2719 | Msa1362260:intergenic | 20.0% |
!! | AAAAAGAAAACAACAAATCA+AGG | + | tig0017749:2701-2720 | Msa1362260:intergenic | 20.0% |
!!! | GATTTTATATTTTGTTTGTG+AGG | - | tig0017749:3069-3088 | Msa1362260:intron | 20.0% |
!!! | ATAATTTTAACAGTTACAGT+TGG | + | tig0017749:3227-3246 | Msa1362260:intergenic | 20.0% |
!! | ACTGTTAAAATTATTAACTG+TGG | - | tig0017749:3233-3252 | Msa1362260:intron | 20.0% |
!! | ATATGAATATTCAAATGAAG+GGG | + | tig0017749:3463-3482 | Msa1362260:intergenic | 20.0% |
!!! | TGAATATTCATATTTTCAGA+TGG | - | tig0017749:3470-3489 | Msa1362260:intron | 20.0% |
!!! | GAATATTCATATTTTCAGAT+GGG | - | tig0017749:3471-3490 | Msa1362260:intron | 20.0% |
!! | AAGGTAAATAAATCAAAAAC+AGG | - | tig0017749:3497-3516 | Msa1362260:intron | 20.0% |
!! | AAATAAATCAAAAACAGGAA+AGG | - | tig0017749:3502-3521 | Msa1362260:intron | 20.0% |
!! | ACGTTTATATTTATCTTTCT+TGG | + | tig0017749:3753-3772 | Msa1362260:intergenic | 20.0% |
!! | AAGAAAGATAAATATAAACG+TGG | - | tig0017749:3752-3771 | Msa1362260:CDS | 20.0% |
!! | AAAGATAAATTACTGAAATC+TGG | + | tig0017749:3899-3918 | Msa1362260:intergenic | 20.0% |
!! | AGCCTTTAATTATATGAAAT+TGG | - | tig0017749:4504-4523 | Msa1362260:intron | 20.0% |
!!! | TTACAGTTAGAATTTTTTGA+TGG | - | tig0017749:4656-4675 | Msa1362260:intron | 20.0% |
!! | AACCAAAAAGAAAAACATTT+AGG | + | tig0017749:5062-5081 | Msa1362260:intergenic | 20.0% |
!! | CTTATAAAAAATTAATGAGC+AGG | - | tig0017749:5399-5418 | Msa1362260:intron | 20.0% |
!!! | TAGATTTTATAGTTGAATGA+TGG | - | tig0017749:6502-6521 | Msa1362260:intron | 20.0% |
!! | TTCAAAAAAACAAACTGTAT+AGG | + | tig0017749:7497-7516 | Msa1362260:intergenic | 20.0% |
! | TTTCACAAAGTGTAATAAGT+TGG | + | tig0017749:32-51 | Msa1420940:intergenic | 25.0% |
!!! | TTTGATGTTTAGGGTTTTAA+GGG | + | tig0017749:116-135 | Msa1362260:intergenic | 25.0% |
!!! | ATTTGATGTTTAGGGTTTTA+AGG | + | tig0017749:117-136 | Msa1362260:intergenic | 25.0% |
! | AAACGAAATACTTAAAACAC+AGG | + | tig0017749:616-635 | Msa1362260:intergenic | 25.0% |
!! | CATTGATTGTTGAATTTGTT+AGG | - | tig0017749:681-700 | Msa1362260:CDS | 25.0% |
!!! | CGTTCATTTTAATTAATCCA+AGG | + | tig0017749:782-801 | Msa1362260:intergenic | 25.0% |
!! | TTTTACTTAAAATCATCAGG+TGG | + | tig0017749:896-915 | Msa1362260:intergenic | 25.0% |
! | TTTAAATTAATCTAAGGGCT+TGG | + | tig0017749:1064-1083 | Msa1362260:intergenic | 25.0% |
! | TTAAATGAATGGATAGGATT+TGG | - | tig0017749:1079-1098 | Msa1362260:intron | 25.0% |
! | AAATTTGACTAGTAAGATGA+AGG | - | tig0017749:1292-1311 | Msa1362260:CDS | 25.0% |
! | TTTATGGATGTATCTATTGA+TGG | - | tig0017749:1344-1363 | Msa1362260:CDS | 25.0% |
! | TTATGGATGTATCTATTGAT+GGG | - | tig0017749:1345-1364 | Msa1362260:CDS | 25.0% |
! | ATAAACAATATTTGCATGGA+TGG | + | tig0017749:1656-1675 | Msa1362260:intergenic | 25.0% |
! | AAGCATAAACAATATTTGCA+TGG | + | tig0017749:1660-1679 | Msa1362260:intergenic | 25.0% |
!! | GCAAATATTGTTTATGCTTT+TGG | - | tig0017749:1661-1680 | Msa1362260:CDS | 25.0% |
! | TTCTTCCATCATATTATGAA+AGG | - | tig0017749:1824-1843 | Msa1362260:CDS | 25.0% |
! | CTGTCGAAAAATTTAGATTT+AGG | + | tig0017749:1882-1901 | Msa1362260:intergenic | 25.0% |
! | AAATTGCAACCATCAAAAAA+TGG | + | tig0017749:2271-2290 | Msa1362260:intergenic | 25.0% |
!! | AGATTTGGTATTTAATCAAC+TGG | + | tig0017749:2612-2631 | Msa1362260:intergenic | 25.0% |
!! | TTTCGTAAATTTTACTGTCA+TGG | - | tig0017749:2640-2659 | Msa1362260:CDS | 25.0% |
!! | ATAGACGAGTTGAAAATTAA+TGG | + | tig0017749:2731-2750 | Msa1362260:intergenic | 25.0% |
!!! | ATTAACGTGGTTTGTATTTT+TGG | - | tig0017749:2873-2892 | Msa1362260:intron | 25.0% |
!!! | GCTATTCTAATATTTTTTGG+TGG | - | tig0017749:3028-3047 | Msa1362260:intron | 25.0% |
! | GGTTAATTGGAATTCATATT+AGG | + | tig0017749:3314-3333 | Msa1362260:intergenic | 25.0% |
! | AATCTGTACATAATAACAGA+AGG | + | tig0017749:3876-3895 | Msa1362260:intergenic | 25.0% |
! | AACCATACTCATATAACTAA+AGG | + | tig0017749:4012-4031 | Msa1362260:intergenic | 25.0% |
! | TATTGTGGAGATTCTTTATT+CGG | - | tig0017749:4095-4114 | Msa1362260:intron | 25.0% |
! | TTCTAACTGTTAAAAATGCA+TGG | + | tig0017749:4151-4170 | Msa1362260:intergenic | 25.0% |
! | TAACAGTTAGAATTCTTTGA+TGG | - | tig0017749:4159-4178 | Msa1362260:intron | 25.0% |
!!! | AAGCATGACTAGTTTTTTTT+AGG | + | tig0017749:4368-4387 | Msa1362260:intergenic | 25.0% |
! | AAAAAAACTAGTCATGCTTA+AGG | - | tig0017749:4369-4388 | Msa1362260:CDS | 25.0% |
! | TTGGTACAGAAAAATACATA+TGG | + | tig0017749:4039-4058 | Msa1362260:intergenic | 25.0% |
! | TCTAACTGTAAAAAATGCAA+GGG | + | tig0017749:4647-4666 | Msa1362260:intergenic | 25.0% |
! | TTCTAACTGTAAAAAATGCA+AGG | + | tig0017749:4648-4667 | Msa1362260:intergenic | 25.0% |
! | CATACAAAATGGTAATTGAA+AGG | + | tig0017749:4721-4740 | Msa1362260:intergenic | 25.0% |
!!! | GAAAAGATGTATTTTAAGCA+TGG | + | tig0017749:4809-4828 | Msa1362260:intergenic | 25.0% |
!! | GCTTAAAATACATCTTTTCA+AGG | - | tig0017749:4810-4829 | Msa1362260:intron | 25.0% |
! | AAAGATCGTTATCAGAAAAA+AGG | - | tig0017749:4946-4965 | Msa1362260:intron | 25.0% |
!! | CTCCTAAATGTTTTTCTTTT+TGG | - | tig0017749:5057-5076 | Msa1362260:intron | 25.0% |
! | GAAAAAACTGTAAAGGAAAA+TGG | - | tig0017749:5223-5242 | Msa1362260:intron | 25.0% |
! | GTAAGCAGAATAAATAACTA+AGG | + | tig0017749:5368-5387 | Msa1362260:intergenic | 25.0% |
!! | CTTTTTCTCAATCTTCTTTT+TGG | + | tig0017749:5512-5531 | Msa1362260:intergenic | 25.0% |
! | AAAGAGGAAAAAAAAAACCT+TGG | + | tig0017749:6612-6631 | Msa1362260:intergenic | 25.0% |
! | AGTAATTGTCATAAGTAAAG+AGG | + | tig0017749:6628-6647 | Msa1362260:intergenic | 25.0% |
! | GTTGAGTCCATATAATTATT+TGG | - | tig0017749:6756-6775 | Msa1362260:intron | 25.0% |
! | AGAAATAAAACATGGCATAT+TGG | + | tig0017749:7222-7241 | Msa1362260:intergenic | 25.0% |
! | GTCTACAAAGAAATAAAACA+TGG | + | tig0017749:7230-7249 | Msa1362260:intergenic | 25.0% |
!!! | AGTTGATTTCAAATTTTCAG+AGG | + | tig0017749:7467-7486 | Msa1362260:intergenic | 25.0% |
!! | ACAAAGTGTAATAAGTTGGT+TGG | + | tig0017749:28-47 | Msa1420940:intergenic | 30.0% |
GGAAGAAAAGGATAAAGAAA+AGG | + | tig0017749:293-312 | Msa1362260:intergenic | 30.0% | |
! | CATTGATTGTGGAATTTGTT+AGG | - | tig0017749:971-990 | Msa1362260:CDS | 30.0% |
ATGATAACTCTGGTACATTA+TGG | - | tig0017749:1144-1163 | Msa1362260:CDS | 30.0% | |
GAAACCAGTACAATACAATT+GGG | + | tig0017749:1208-1227 | Msa1362260:intergenic | 30.0% | |
AAAATGTATCAGCAAGAAAG+CGG | + | tig0017749:1244-1263 | Msa1362260:intergenic | 30.0% | |
TATGGATGTATCTATTGATG+GGG | - | tig0017749:1346-1365 | Msa1362260:CDS | 30.0% | |
! | TCAAAGACCATTCTTTTAAC+GGG | + | tig0017749:1374-1393 | Msa1362260:intergenic | 30.0% |
! | CTCAAAGACCATTCTTTTAA+CGG | + | tig0017749:1375-1394 | Msa1362260:intergenic | 30.0% |
AAATACCTGTACATAATGCA+CGG | + | tig0017749:1519-1538 | Msa1362260:intergenic | 30.0% | |
!! | CTTTTGAAAGCAAAAAGGAA+TGG | + | tig0017749:1564-1583 | Msa1362260:intergenic | 30.0% |
CAATTTGTCTACCTATTGAA+CGG | - | tig0017749:1705-1724 | Msa1362260:CDS | 30.0% | |
GAAAACAATCAATCACAGAA+AGG | + | tig0017749:1749-1768 | Msa1362260:intergenic | 30.0% | |
! | TTCTGTGATTGATTGTTTTC+AGG | - | tig0017749:1749-1768 | Msa1362260:CDS | 30.0% |
!!! | TGAAGGTATGTTGTTTTATC+TGG | - | tig0017749:1855-1874 | Msa1362260:CDS | 30.0% |
AGCTTATTAGAGTATGATGA+TGG | + | tig0017749:2094-2113 | Msa1362260:intergenic | 30.0% | |
TCATACTCTAATAAGCTTCT+TGG | - | tig0017749:2097-2116 | Msa1362260:CDS | 30.0% | |
TACAATAATGCATACAGACT+GGG | + | tig0017749:2131-2150 | Msa1362260:intergenic | 30.0% | |
!! | GTTTTTACTTTTATACAGGG+TGG | - | tig0017749:2175-2194 | Msa1362260:intron | 30.0% |
TCCTTTACTTGAACACAAAT+TGG | - | tig0017749:2435-2454 | Msa1362260:intron | 30.0% | |
! | AGTTGAAAATTAATGGACAC+AGG | + | tig0017749:2724-2743 | Msa1362260:intergenic | 30.0% |
ATATATGGTTCAAACTTTCC+TGG | - | tig0017749:2783-2802 | Msa1362260:intron | 30.0% | |
TTTCTATCTCAACATTAACG+TGG | - | tig0017749:2860-2879 | Msa1362260:intron | 30.0% | |
TGCAGGAAATATATAGTCTT+TGG | - | tig0017749:3137-3156 | Msa1362260:intron | 30.0% | |
GCAGGAAATATATAGTCTTT+GGG | - | tig0017749:3138-3157 | Msa1362260:intron | 30.0% | |
TTGAAGAAAATCGAAGATGT+TGG | - | tig0017749:3185-3204 | Msa1362260:intron | 30.0% | |
TAACTGTGGTGAATATAATG+AGG | - | tig0017749:3247-3266 | Msa1362260:intron | 30.0% | |
AACTGTGGTGAATATAATGA+GGG | - | tig0017749:3248-3267 | Msa1362260:intron | 30.0% | |
! | TTTTCGGAATGTAGGTTAAT+TGG | + | tig0017749:3327-3346 | Msa1362260:intergenic | 30.0% |
AAACTGTGCAATTAAAGAGT+TGG | + | tig0017749:3358-3377 | Msa1362260:intergenic | 30.0% | |
! | TATTTTCCCTCTTCAATTGA+AGG | - | tig0017749:3394-3413 | Msa1362260:intron | 30.0% |
AAATCAAAAACAGGAAAGGA+TGG | - | tig0017749:3506-3525 | Msa1362260:intron | 30.0% | |
AAGGCAATAATCTTGAAACA+CGG | - | tig0017749:3537-3556 | Msa1362260:intron | 30.0% | |
TGAACTTATATCAGATGATG+AGG | + | tig0017749:3696-3715 | Msa1362260:intergenic | 30.0% | |
! | GATGAATGTATTTTCATGCA+TGG | - | tig0017749:3924-3943 | Msa1362260:intron | 30.0% |
CGTATAAATATGCACTACAT+CGG | + | tig0017749:3979-3998 | Msa1362260:intergenic | 30.0% | |
AGCCTTTAGTTATATGAGTA+TGG | - | tig0017749:4007-4026 | Msa1362260:CDS | 30.0% | |
AAAGTACATGACAAGAGAAT+TGG | + | tig0017749:4058-4077 | Msa1362260:intergenic | 30.0% | |
TGTACTTTGTATGCATTGAA+TGG | - | tig0017749:4070-4089 | Msa1362260:intron | 30.0% | |
TCCTTTCAACTTACAATCTT+GGG | - | tig0017749:4221-4240 | Msa1362260:intron | 30.0% | |
!!! | TTTTAATTTGCGGTGTATTC+AGG | - | tig0017749:4270-4289 | Msa1362260:intron | 30.0% |
!!! | TACTGCAGGTCATATTTTTT+TGG | - | tig0017749:4413-4432 | Msa1362260:intron | 30.0% |
!!! | ACTGCAGGTCATATTTTTTT+GGG | - | tig0017749:4414-4433 | Msa1362260:intron | 30.0% |
!!! | GTCATATTTTTTTGGGAATC+TGG | - | tig0017749:4421-4440 | Msa1362260:intron | 30.0% |
TGTATAAATATGCACAGCAT+GGG | + | tig0017749:4476-4495 | Msa1362260:intergenic | 30.0% | |
TTGTATAAATATGCACAGCA+TGG | + | tig0017749:4477-4496 | Msa1362260:intergenic | 30.0% | |
! | TTTTTCTGTACCAATTCTCT+TGG | - | tig0017749:4045-4064 | Msa1362260:CDS | 30.0% |
ACAAAATGGTAATTGAAAGG+AGG | + | tig0017749:4718-4737 | Msa1362260:intergenic | 30.0% | |
GTACAACAAATTAATCAACC+AGG | + | tig0017749:4744-4763 | Msa1362260:intergenic | 30.0% | |
!!! | TTAAGCATGGCTAGTTTTTT+TGG | + | tig0017749:4796-4815 | Msa1362260:intergenic | 30.0% |
!!! | ACTGAATGTCATACTTTTTC+AGG | - | tig0017749:4839-4858 | Msa1362260:intron | 30.0% |
!!! | CTGAATGTCATACTTTTTCA+GGG | - | tig0017749:4840-4859 | Msa1362260:intron | 30.0% |
GAGCAATGAAAAAACTGTAA+AGG | - | tig0017749:5216-5235 | Msa1362260:intron | 30.0% | |
ATACTCATACTCTTACTCAT+GGG | + | tig0017749:5449-5468 | Msa1362260:intergenic | 30.0% | |
AATACTCATACTCTTACTCA+TGG | + | tig0017749:5450-5469 | Msa1362260:intergenic | 30.0% | |
! | TTTTTCTTGACACTCTTACA+GGG | + | tig0017749:5937-5956 | Msa1362260:intergenic | 30.0% |
!!! | TTTTTTCTTGACACTCTTAC+AGG | + | tig0017749:5938-5957 | Msa1362260:intergenic | 30.0% |
GATCAATTCTTCCATTGTAT+CGG | + | tig0017749:6432-6451 | Msa1362260:intergenic | 30.0% | |
AAATCTAAATACCAGCAGAA+AGG | + | tig0017749:6489-6508 | Msa1362260:intergenic | 30.0% | |
TTCTGTAACTTGAATATCTG+CGG | + | tig0017749:6542-6561 | Msa1362260:intergenic | 30.0% | |
! | TTTTTGCTGCATAACTTATG+TGG | - | tig0017749:6685-6704 | Msa1362260:intron | 30.0% |
AAGACAGTACTTGTGAAATT+AGG | - | tig0017749:7288-7307 | Msa1362260:intron | 30.0% | |
AAAAACAAACTGTATAGGCA+GGG | + | tig0017749:7492-7511 | Msa1362260:intergenic | 30.0% | |
AAAAAACAAACTGTATAGGC+AGG | + | tig0017749:7493-7512 | Msa1362260:intergenic | 30.0% | |
TGGGTGAGATTTGATGTTTA+GGG | + | tig0017749:125-144 | Msa1362260:intergenic | 35.0% | |
TCTAACTACTTTGTGATGCA+GGG | + | tig0017749:165-184 | Msa1362260:intergenic | 35.0% | |
GTGGATATTCTTACAGTTAC+CGG | + | tig0017749:265-284 | Msa1362260:intergenic | 35.0% | |
GGATAAAGAAAAGGAAAGAG+TGG | + | tig0017749:284-303 | Msa1362260:intergenic | 35.0% | |
GAAGGAAAATCTGGAAGAAA+AGG | + | tig0017749:305-324 | Msa1362260:intergenic | 35.0% | |
AGAGTTATCATCAATGAGTC+AGG | + | tig0017749:1135-1154 | Msa1362260:intergenic | 35.0% | |
! | TGACTCATTGATGATAACTC+TGG | - | tig0017749:1134-1153 | Msa1362260:CDS | 35.0% |
GGAAACCAGTACAATACAAT+TGG | + | tig0017749:1209-1228 | Msa1362260:intergenic | 35.0% | |
CGTTAAAAGAATGGTCTTTG+AGG | - | tig0017749:1373-1392 | Msa1362260:CDS | 35.0% | |
AATTTCCGTGCATTATGTAC+AGG | - | tig0017749:1511-1530 | Msa1362260:CDS | 35.0% | |
!! | GGCAACTTTTGAAAGCAAAA+AGG | + | tig0017749:1569-1588 | Msa1362260:intergenic | 35.0% |
!! | TTATGCTTTTGGTTGCAAGT+TGG | - | tig0017749:1672-1691 | Msa1362260:CDS | 35.0% |
ACAATCAATCACAGAAAGGT+GGG | + | tig0017749:1745-1764 | Msa1362260:intergenic | 35.0% | |
AACAATCAATCACAGAAAGG+TGG | + | tig0017749:1746-1765 | Msa1362260:intergenic | 35.0% | |
!! | AGAGGTATCAGTTCAAATAC+TGG | - | tig0017749:1776-1795 | Msa1362260:CDS | 35.0% |
TGGAAAATTGCTTCACTACA+AGG | - | tig0017749:1796-1815 | Msa1362260:CDS | 35.0% | |
GGAAAATTGCTTCACTACAA+GGG | - | tig0017749:1797-1816 | Msa1362260:CDS | 35.0% | |
TGGAGCCTTTCATAATATGA+TGG | + | tig0017749:1832-1851 | Msa1362260:intergenic | 35.0% | |
AAAACAACATACCTTCACGA+TGG | + | tig0017749:1852-1871 | Msa1362260:intergenic | 35.0% | |
CTATATATGCCCTTTCATTG+TGG | - | tig0017749:1907-1926 | Msa1362260:CDS | 35.0% | |
CATGTTCAACCACAATGAAA+GGG | + | tig0017749:1919-1938 | Msa1362260:intergenic | 35.0% | |
TACAGCATAAACAAGGGTAA+TGG | + | tig0017749:1958-1977 | Msa1362260:intergenic | 35.0% | |
! | ATTACCCTTGTTTATGCTGT+AGG | - | tig0017749:1957-1976 | Msa1362260:CDS | 35.0% |
GTATCCTACAGCATAAACAA+GGG | + | tig0017749:1964-1983 | Msa1362260:intergenic | 35.0% | |
TGTATCCTACAGCATAAACA+AGG | + | tig0017749:1965-1984 | Msa1362260:intergenic | 35.0% | |
TTTATGCTGTAGGATACACA+GGG | - | tig0017749:1967-1986 | Msa1362260:CDS | 35.0% | |
GTACAATAATGCATACAGAC+TGG | + | tig0017749:2132-2151 | Msa1362260:intergenic | 35.0% | |
! | GGTGATTTTGTCAATCGTAA+TGG | - | tig0017749:2196-2215 | Msa1362260:intron | 35.0% |
AATGGACAGCAAACTAGTAA+TGG | + | tig0017749:2253-2272 | Msa1362260:intergenic | 35.0% | |
!!! | GTTTGCTGTCCATTTTTTGA+TGG | - | tig0017749:2259-2278 | Msa1362260:CDS | 35.0% |
AAAGAAATTACCATCGTCAC+AGG | + | tig0017749:2383-2402 | Msa1362260:intergenic | 35.0% | |
GCCAATTTGTGTTCAAGTAA+AGG | + | tig0017749:2439-2458 | Msa1362260:intergenic | 35.0% | |
TACGAAACACCCAAAAGATT+TGG | + | tig0017749:2627-2646 | Msa1362260:intergenic | 35.0% | |
AAGAACGTATTATTCCTACC+AGG | + | tig0017749:2804-2823 | Msa1362260:intergenic | 35.0% | |
! | GCACTTTCTAGTATGATGTT+GGG | + | tig0017749:2829-2848 | Msa1362260:intergenic | 35.0% |
! | AGCACTTTCTAGTATGATGT+TGG | + | tig0017749:2830-2849 | Msa1362260:intergenic | 35.0% |
!!! | TTATTTTAGACGAGTCACCT+AGG | - | tig0017749:2897-2916 | Msa1362260:intron | 35.0% |
AATGAGAACCAAGCTTATCA+CGG | + | tig0017749:2967-2986 | Msa1362260:intergenic | 35.0% | |
! | GTGGCATTTTACTTCTTTCT+CGG | - | tig0017749:3047-3066 | Msa1362260:intron | 35.0% |
GGAAATATATAGTCTTTGGG+AGG | - | tig0017749:3141-3160 | Msa1362260:intron | 35.0% | |
!! | AAGATGTTGGTGATGATGAA+GGG | - | tig0017749:3198-3217 | Msa1362260:intron | 35.0% |
TGGTGAATATAATGAGGGTA+TGG | - | tig0017749:3253-3272 | Msa1362260:intron | 35.0% | |
! | AGACTGAATTTTCGGAATGT+AGG | + | tig0017749:3335-3354 | Msa1362260:intergenic | 35.0% |
! | AGAGTTGGAGACTGAATTTT+CGG | + | tig0017749:3343-3362 | Msa1362260:intergenic | 35.0% |
! | CATATTTTCAGATGGGAAGA+AGG | - | tig0017749:3478-3497 | Msa1362260:intron | 35.0% |
TTCAAGATTATTGCCTTCAC+AGG | + | tig0017749:3534-3553 | Msa1362260:intergenic | 35.0% | |
CTTCAAAAGACAGAAGGAAA+AGG | - | tig0017749:3582-3601 | Msa1362260:intron | 35.0% | |
AGATTCAGACATGGAATCTT+CGG | - | tig0017749:3640-3659 | Msa1362260:intron | 35.0% | |
TAAGTTCATCTAGTGATGAC+AGG | - | tig0017749:3708-3727 | Msa1362260:intron | 35.0% | |
TCATGCATGGTAATACACAA+TGG | - | tig0017749:3937-3956 | Msa1362260:intron | 35.0% | |
ATGGTAATACACAATGGTAG+AGG | - | tig0017749:3943-3962 | Msa1362260:CDS | 35.0% | |
TAATACACAATGGTAGAGGT+AGG | - | tig0017749:3947-3966 | Msa1362260:CDS | 35.0% | |
ATGCATTGAATGGTCTATTG+TGG | - | tig0017749:4080-4099 | Msa1362260:intron | 35.0% | |
! | CAAGATTGTAAGTTGAAAGG+AGG | + | tig0017749:4222-4241 | Msa1362260:intergenic | 35.0% |
CTCCTTTCAACTTACAATCT+TGG | - | tig0017749:4220-4239 | Msa1362260:intron | 35.0% | |
! | ACCCAAGATTGTAAGTTGAA+AGG | + | tig0017749:4225-4244 | Msa1362260:intergenic | 35.0% |
!!! | GCGATGGTCATTTTAATTTG+CGG | - | tig0017749:4260-4279 | Msa1362260:intron | 35.0% |
! | CTTAAGGACACATCTTTTCA+AGG | - | tig0017749:4385-4404 | Msa1362260:CDS | 35.0% |
! | CAATTACCATTTTGTATGCC+TGG | - | tig0017749:4723-4742 | Msa1362260:intron | 35.0% |
AATCAACCAGGCATACAAAA+TGG | + | tig0017749:4732-4751 | Msa1362260:intergenic | 35.0% | |
!!! | TCATACTTTTTCAGGGAATC+TGG | - | tig0017749:4847-4866 | Msa1362260:intron | 35.0% |
TGAAAGTCTTGATACTCAAC+AGG | - | tig0017749:4909-4928 | Msa1362260:intron | 35.0% | |
AGTTCAGCTGGACATAAAAA+AGG | + | tig0017749:5124-5143 | Msa1362260:intergenic | 35.0% | |
TCCTTTCTATGATGAATGGT+GGG | + | tig0017749:5178-5197 | Msa1362260:intergenic | 35.0% | |
TTCCTTTCTATGATGAATGG+TGG | + | tig0017749:5179-5198 | Msa1362260:intergenic | 35.0% | |
CTCTTCCTTTCTATGATGAA+TGG | + | tig0017749:5182-5201 | Msa1362260:intergenic | 35.0% | |
CATTCATCATAGAAAGGAAG+AGG | - | tig0017749:5180-5199 | Msa1362260:CDS | 35.0% | |
TTCACTTCTGTCAGATCTAT+AGG | + | tig0017749:5278-5297 | Msa1362260:intergenic | 35.0% | |
ATGTTCATTTGGGCAAATCT+AGG | - | tig0017749:5320-5339 | Msa1362260:intron | 35.0% | |
AGAGTATGAGTATTAGTCCT+AGG | - | tig0017749:5456-5475 | Msa1362260:intron | 35.0% | |
!!! | TTCTTTTTGGAGTAATGCTC+CGG | + | tig0017749:5499-5518 | Msa1362260:intergenic | 35.0% |
TCTTTCTTGACACTCTTACA+GGG | + | tig0017749:5865-5884 | Msa1362260:intergenic | 35.0% | |
TCTTTCTTGACACTCTTACA+GGG | + | tig0017749:5865-5884 | Msa1362260:intergenic | 35.0% | |
TCTTTCTTGACACTCTTACA+GGG | + | tig0017749:5865-5884 | Msa1362260:intergenic | 35.0% | |
!! | CAAATTTGTTACCTTTCTGC+TGG | - | tig0017749:6475-6494 | Msa1362260:intron | 35.0% |
! | GCAGATATTCAAGTTACAGA+AGG | - | tig0017749:6541-6560 | Msa1362260:intron | 35.0% |
GAGGAAAAAAAAAACCTTGG+AGG | + | tig0017749:6609-6628 | Msa1362260:intergenic | 35.0% | |
ATGGTTCAAGGAACTAACAA+TGG | + | tig0017749:6716-6735 | Msa1362260:intergenic | 35.0% | |
TTGCTTAATGCTGGAATTTG+TGG | - | tig0017749:7193-7212 | Msa1362260:intron | 35.0% | |
AAAACAAACTGTATAGGCAG+GGG | + | tig0017749:7491-7510 | Msa1362260:intergenic | 35.0% | |
! | GTTTCCGAACCAAATGGATT+GGG | + | tig0017749:91-110 | Msa1362260:intergenic | 40.0% |
!! | CAATCCATTTGGTTCGGAAA+CGG | - | tig0017749:90-109 | Msa1362260:three_prime_UTR | 40.0% |
GTGGGTGAGATTTGATGTTT+AGG | + | tig0017749:126-145 | Msa1362260:intergenic | 40.0% | |
CTAACTACTTTGTGATGCAG+GGG | + | tig0017749:164-183 | Msa1362260:intergenic | 40.0% | |
CTCTAACTACTTTGTGATGC+AGG | + | tig0017749:166-185 | Msa1362260:intergenic | 40.0% | |
!!! | TTTTCCAGTGGTTTTAACGG+CGG | + | tig0017749:206-225 | Msa1362260:intergenic | 40.0% |
!!! | GCGTTTTCCAGTGGTTTTAA+CGG | + | tig0017749:209-228 | Msa1362260:intergenic | 40.0% |
ATATTCTTACAGTTACCGGC+GGG | + | tig0017749:261-280 | Msa1362260:intergenic | 40.0% | |
GATATTCTTACAGTTACCGG+CGG | + | tig0017749:262-281 | Msa1362260:intergenic | 40.0% | |
ATGAGAAGCGAAGGAAAATC+TGG | + | tig0017749:314-333 | Msa1362260:intergenic | 40.0% | |
ACTTTGTGCGTGTATCATTC+TGG | + | tig0017749:727-746 | Msa1362260:intergenic | 40.0% | |
AGTGAAATCATCTAAGCCCT+TGG | - | tig0017749:762-781 | Msa1362260:intron | 40.0% | |
! | CATCGAGTGTGGAATTTGTT+AGG | - | tig0017749:829-848 | Msa1362260:intron | 40.0% |
! | ACTAGAAGCGACATTGATTG+TGG | - | tig0017749:960-979 | Msa1362260:CDS | 40.0% |
AGAAAGCGGAAATATGGCAT+GGG | + | tig0017749:1230-1249 | Msa1362260:intergenic | 40.0% | |
AAGAAAGCGGAAATATGGCA+TGG | + | tig0017749:1231-1250 | Msa1362260:intergenic | 40.0% | |
TCAGCAAGAAAGCGGAAATA+TGG | + | tig0017749:1236-1255 | Msa1362260:intergenic | 40.0% | |
!! | ACCAGCGGATTCTTTTTCTT+AGG | + | tig0017749:1323-1342 | Msa1362260:intergenic | 40.0% |
AAAGAATCCGCTGGTGTTTA+TGG | - | tig0017749:1328-1347 | Msa1362260:CDS | 40.0% | |
GATACATCCATAAACACCAG+CGG | + | tig0017749:1338-1357 | Msa1362260:intergenic | 40.0% | |
! | CGGAAATTTTCTGCAGTCTT+GGG | + | tig0017749:1499-1518 | Msa1362260:intergenic | 40.0% |
! | ACGGAAATTTTCTGCAGTCT+TGG | + | tig0017749:1500-1519 | Msa1362260:intergenic | 40.0% |
TGCTTGGATAGTACAAGACT+GGG | + | tig0017749:1603-1622 | Msa1362260:intergenic | 40.0% | |
! | TATCCAAGCAGACAGGTTTT+TGG | - | tig0017749:1613-1632 | Msa1362260:CDS | 40.0% |
AATCAATCACAGAAAGGTGG+GGG | + | tig0017749:1743-1762 | Msa1362260:intergenic | 40.0% | |
CAATCAATCACAGAAAGGTG+GGG | + | tig0017749:1744-1763 | Msa1362260:intergenic | 40.0% | |
!! | TGATTGTTTTCAGGAGAGAG+AGG | - | tig0017749:1758-1777 | Msa1362260:CDS | 40.0% |
CCATGTTCAACCACAATGAA+AGG | + | tig0017749:1920-1939 | Msa1362260:intergenic | 40.0% | |
CCTTTCATTGTGGTTGAACA+TGG | - | tig0017749:1917-1936 | Msa1362260:CDS | 40.0% | |
GTTTATGCTGTAGGATACAC+AGG | - | tig0017749:1966-1985 | Msa1362260:CDS | 40.0% | |
ATAATGCATACAGACTGGGT+TGG | + | tig0017749:2127-2146 | Msa1362260:intergenic | 40.0% | |
GGAAACATGCAAATGGAACA+AGG | + | tig0017749:2362-2381 | Msa1362260:intergenic | 40.0% | |
! | AAATTGGCCTGTAACTGAGT+AGG | - | tig0017749:2451-2470 | Msa1362260:intron | 40.0% |
! | AATTGGCCTGTAACTGAGTA+GGG | - | tig0017749:2452-2471 | Msa1362260:intron | 40.0% |
TAATAGCCCTACTCAGTTAC+AGG | + | tig0017749:2461-2480 | Msa1362260:intergenic | 40.0% | |
TTACTGTCATGGCTTAGTCT+AGG | - | tig0017749:2651-2670 | Msa1362260:CDS | 40.0% | |
! | GTCTATGCACTGCATTTTCA+GGG | - | tig0017749:2745-2764 | Msa1362260:intron | 40.0% |
! | ACTGGTGGAGAAAGCATATA+TGG | - | tig0017749:2768-2787 | Msa1362260:intron | 40.0% |
ATGGTTCAAACTTTCCTGGT+AGG | - | tig0017749:2787-2806 | Msa1362260:intron | 40.0% | |
GAATAGCAAACCTGTCAAGA+TGG | + | tig0017749:3015-3034 | Msa1362260:intergenic | 40.0% | |
!! | GAAGATGTTGGTGATGATGA+AGG | - | tig0017749:3197-3216 | Msa1362260:intron | 40.0% |
! | AATGAGGGTATGGATTGCTT+AGG | - | tig0017749:3263-3282 | Msa1362260:intron | 40.0% |
! | AGAGCACCTTCAATTGAAGA+GGG | + | tig0017749:3403-3422 | Msa1362260:intergenic | 40.0% |
! | TAGAGCACCTTCAATTGAAG+AGG | + | tig0017749:3404-3423 | Msa1362260:intergenic | 40.0% |
GCAATAATCTTGAAACACGG+AGG | - | tig0017749:3540-3559 | Msa1362260:intron | 40.0% | |
TAATCTTGAAACACGGAGGA+AGG | - | tig0017749:3544-3563 | Msa1362260:intron | 40.0% | |
AATCTTGAAACACGGAGGAA+GGG | - | tig0017749:3545-3564 | Msa1362260:intron | 40.0% | |
AGAGGTCTTCAAAAGACAGA+AGG | - | tig0017749:3576-3595 | Msa1362260:intron | 40.0% | |
AACTCTCTGATTCAGATGAG+TGG | + | tig0017749:3616-3635 | Msa1362260:intergenic | 40.0% | |
GAGTTCTTCAGATTCAGACA+TGG | - | tig0017749:3631-3650 | Msa1362260:intron | 40.0% | |
!! | TTTTCAAGGTCTCATACTGC+AGG | - | tig0017749:4399-4418 | Msa1362260:CDS | 40.0% |
AATCTGGCAGTGATTCAGAA+TGG | - | tig0017749:4437-4456 | Msa1362260:intron | 40.0% | |
GAAGTAAACGCCAAGAGAAT+TGG | + | tig0017749:4555-4574 | Msa1362260:intergenic | 40.0% | |
ACCCACCATTCATCATAGAA+AGG | - | tig0017749:5174-5193 | Msa1362260:intron | 40.0% | |
TCATCATAGAAAGGAAGAGG+CGG | - | tig0017749:5183-5202 | Msa1362260:CDS | 40.0% | |
!!! | ACAGTTTTTTCATTGCTCGC+TGG | + | tig0017749:5214-5233 | Msa1362260:intergenic | 40.0% |
CTGTAAAGGAAAATGGAGAG+CGG | - | tig0017749:5230-5249 | Msa1362260:intron | 40.0% | |
AAATGAACATCCATCACGTC+AGG | + | tig0017749:5310-5329 | Msa1362260:intergenic | 40.0% | |
!! | TGACGTGATGGATGTTCATT+TGG | - | tig0017749:5309-5328 | Msa1362260:intron | 40.0% |
!! | GACGTGATGGATGTTCATTT+GGG | - | tig0017749:5310-5329 | Msa1362260:intron | 40.0% |
AACTAAGGTGTGACAAGAGA+GGG | + | tig0017749:5353-5372 | Msa1362260:intergenic | 40.0% | |
TAACTAAGGTGTGACAAGAG+AGG | + | tig0017749:5354-5373 | Msa1362260:intergenic | 40.0% | |
GTATGAGTATTAGTCCTAGG+AGG | - | tig0017749:5459-5478 | Msa1362260:intron | 40.0% | |
TTAAGAGGACGAGTTATCAC+AGG | + | tig0017749:5725-5744 | Msa1362260:intergenic | 40.0% | |
CTCTTTCGTGATGATACTCT+GGG | + | tig0017749:5794-5813 | Msa1362260:intergenic | 40.0% | |
CTCTTTCTTGACACTCTTAC+AGG | + | tig0017749:5866-5885 | Msa1362260:intergenic | 40.0% | |
ACATAAGTCGCAGTCCATTA+AGG | - | tig0017749:5957-5976 | Msa1362260:intron | 40.0% | |
CGACTTAAGCTCTTCCTTAA+TGG | + | tig0017749:5974-5993 | Msa1362260:intergenic | 40.0% | |
CTCTTTCTTGACACTCTTAC+AGG | + | tig0017749:5866-5885 | Msa1362260:intergenic | 40.0% | |
CTCTTTCTTGACACTCTTAC+AGG | + | tig0017749:5866-5885 | Msa1362260:intergenic | 40.0% | |
ATAATCGCCGCAGTTATTCT+AGG | - | tig0017749:6239-6258 | Msa1362260:CDS | 40.0% | |
TAGGACTCCTAGAATAACTG+CGG | + | tig0017749:6249-6268 | Msa1362260:intergenic | 40.0% | |
AACGATACTCCTATGCAAGA+AGG | - | tig0017749:6371-6390 | Msa1362260:intron | 40.0% | |
GGTTCTATACCTTCTTGCAT+AGG | + | tig0017749:6383-6402 | Msa1362260:intergenic | 40.0% | |
ATGGAAGAATTGATCGTGAC+AGG | - | tig0017749:6437-6456 | Msa1362260:intron | 40.0% | |
!! | GGAATATACTTAGGTACCGA+AGG | - | tig0017749:6777-6796 | Msa1362260:intron | 40.0% |
TTCTGCTATATCTTCGAGCT+CGG | + | tig0017749:6841-6860 | Msa1362260:intergenic | 40.0% | |
ACAGAAGACCTAGATTTCAC+TGG | + | tig0017749:6971-6990 | Msa1362260:intergenic | 40.0% | |
AACAGTACCCAAAACCATAG+GGG | + | tig0017749:7125-7144 | Msa1362260:intergenic | 40.0% | |
CAACAGTACCCAAAACCATA+GGG | + | tig0017749:7126-7145 | Msa1362260:intergenic | 40.0% | |
ACAACAGTACCCAAAACCAT+AGG | + | tig0017749:7127-7146 | Msa1362260:intergenic | 40.0% | |
! | GTTGTCATCTTTTGTGAGCT+TGG | - | tig0017749:7142-7161 | Msa1362260:intron | 40.0% |
! | TGTGAGCTTGGCTTCAATTT+TGG | - | tig0017749:7154-7173 | Msa1362260:intron | 40.0% |
GTGAAATTAGGATATGTCCC+TGG | - | tig0017749:7300-7319 | Msa1362260:five_prime_UTR | 40.0% | |
AAATTAGGATATGTCCCTGG+TGG | - | tig0017749:7303-7322 | Msa1362260:five_prime_UTR | 40.0% | |
GGTAGAGTTATTGCGGTATT+TGG | - | tig0017749:7324-7343 | Msa1362260:five_prime_UTR | 40.0% | |
AGAGTTATTGCGGTATTTGG+TGG | - | tig0017749:7327-7346 | Msa1362260:five_prime_UTR | 40.0% | |
! | ATTTGGTGGAACTGGAGTTA+AGG | - | tig0017749:7341-7360 | Msa1362260:five_prime_UTR | 40.0% |
!! | CAAATGGATTGGGCTTGGAT+TGG | + | tig0017749:81-100 | Msa1420940:intergenic | 45.0% |
CAATCCAAGCCCAATCCATT+TGG | - | tig0017749:79-98 | Msa1362260:three_prime_UTR | 45.0% | |
CAAGCCCAATCCATTTGGTT+CGG | - | tig0017749:84-103 | Msa1362260:three_prime_UTR | 45.0% | |
CGTTTCCGAACCAAATGGAT+TGG | + | tig0017749:92-111 | Msa1362260:intergenic | 45.0% | |
TTTGTGATGCAGGGGCAAAA+TGG | + | tig0017749:156-175 | Msa1362260:intergenic | 45.0% | |
!!! | TTTCCAGTGGTTTTAACGGC+GGG | + | tig0017749:205-224 | Msa1362260:intergenic | 45.0% |
GATTACGTGCGTGATCATTC+TGG | + | tig0017749:1016-1035 | Msa1362260:intergenic | 45.0% | |
TCAGGATTCGTTGAGTGTCA+AGG | + | tig0017749:1117-1136 | Msa1362260:intergenic | 45.0% | |
CGGTCCCAATTGTATTGTAC+TGG | - | tig0017749:1201-1220 | Msa1362260:CDS | 45.0% | |
GCCTAAGAAAAAGAATCCGC+TGG | - | tig0017749:1319-1338 | Msa1362260:CDS | 45.0% | |
TGGGGATCCCGTTAAAAGAA+TGG | - | tig0017749:1364-1383 | Msa1362260:CDS | 45.0% | |
CAGCACGATGATCACACATT+AGG | + | tig0017749:1452-1471 | Msa1362260:intergenic | 45.0% | |
CAAGACTGGGATGGAAGAAA+AGG | + | tig0017749:1590-1609 | Msa1362260:intergenic | 45.0% | |
TGGATAGTACAAGACTGGGA+TGG | + | tig0017749:1599-1618 | Msa1362260:intergenic | 45.0% | |
CTGCTTGGATAGTACAAGAC+TGG | + | tig0017749:1604-1623 | Msa1362260:intergenic | 45.0% | |
CTTGTACTATCCAAGCAGAC+AGG | - | tig0017749:1606-1625 | Msa1362260:CDS | 45.0% | |
TGTCCAAAAACCTGTCTGCT+TGG | + | tig0017749:1619-1638 | Msa1362260:intergenic | 45.0% | |
GGATAAGTGCACCGTTCAAT+AGG | + | tig0017749:1719-1738 | Msa1362260:intergenic | 45.0% | |
TATGAAAGGCTCCATCGTGA+AGG | - | tig0017749:1838-1857 | Msa1362260:CDS | 45.0% | |
ATGGAACAAGGCTTGCAACT+CGG | + | tig0017749:2350-2369 | Msa1362260:intergenic | 45.0% | |
CGTCACAGGAAACATGCAAA+TGG | + | tig0017749:2369-2388 | Msa1362260:intergenic | 45.0% | |
TTGCATGTTTCCTGTGACGA+TGG | - | tig0017749:2370-2389 | Msa1362260:CDS | 45.0% | |
! | CGTCTATGCACTGCATTTTC+AGG | - | tig0017749:2744-2763 | Msa1362260:intron | 45.0% |
TCACCTAGGCTAAAGCATGA+TGG | - | tig0017749:2911-2930 | Msa1362260:intron | 45.0% | |
TTGCCATTGACAAAAGCCCA+GGG | + | tig0017749:2937-2956 | Msa1362260:intergenic | 45.0% | |
ATTGCCATTGACAAAAGCCC+AGG | + | tig0017749:2938-2957 | Msa1362260:intergenic | 45.0% | |
ATTGCTGACCGTGATAAGCT+TGG | - | tig0017749:2956-2975 | Msa1362260:intron | 45.0% | |
AAGCTGATCACCATCTTGAC+AGG | - | tig0017749:3002-3021 | Msa1362260:intron | 45.0% | |
!! | TCTTTGGGAGGCTTGTTGAA+GGG | - | tig0017749:3153-3172 | Msa1362260:intron | 45.0% |
GAGATAAACGCCGTGACAAA+AGG | - | tig0017749:3783-3802 | Msa1362260:CDS | 45.0% | |
! | GTCTTCTTCGCCTTTTGTCA+CGG | + | tig0017749:3796-3815 | Msa1362260:intergenic | 45.0% |
GTGACAAAAGGCGAAGAAGA+CGG | - | tig0017749:3795-3814 | Msa1362260:CDS | 45.0% | |
TGACAAAAGGCGAAGAAGAC+GGG | - | tig0017749:3796-3815 | Msa1362260:CDS | 45.0% | |
GATCGAAGCGCAGATCAAAA+AGG | - | tig0017749:3825-3844 | Msa1362260:CDS | 45.0% | |
AACTTACAATCTTGGGTGCC+TGG | - | tig0017749:4228-4247 | Msa1362260:intron | 45.0% | |
GCAGTGATTCAGAATGGTAG+AGG | - | tig0017749:4443-4462 | Msa1362260:intron | 45.0% | |
GCATCTTTCTCCACAAGTGA+GGG | + | tig0017749:5154-5173 | Msa1362260:intergenic | 45.0% | |
TGCATCTTTCTCCACAAGTG+AGG | + | tig0017749:5155-5174 | Msa1362260:intergenic | 45.0% | |
CATCATAGAAAGGAAGAGGC+GGG | - | tig0017749:5184-5203 | Msa1362260:CDS | 45.0% | |
GATCTGACAGAAGTGAAGAG+AGG | - | tig0017749:5281-5300 | Msa1362260:intron | 45.0% | |
TCTTACTCATGGGTCGCTTA+GGG | + | tig0017749:5439-5458 | Msa1362260:intergenic | 45.0% | |
GTATTAGTCCTAGGAGGAGT+AGG | - | tig0017749:5465-5484 | Msa1362260:intron | 45.0% | |
AAACTCCTCCTTGATAGACG+AGG | + | tig0017749:5557-5576 | Msa1362260:intergenic | 45.0% | |
!! | GTCCTGTTAGAAGCATTGAC+AGG | - | tig0017749:5633-5652 | Msa1362260:intron | 45.0% |
CTCCTGTCAATGCTTCTAAC+AGG | + | tig0017749:5638-5657 | Msa1362260:intergenic | 45.0% | |
!! | GTCCTCTTAAAAGTGTCAGC+AGG | - | tig0017749:5735-5754 | Msa1362260:CDS | 45.0% |
! | CTCCTGCTGACACTTTTAAG+AGG | + | tig0017749:5740-5759 | Msa1362260:intergenic | 45.0% |
GCTCTTTCGTGATGATACTC+TGG | + | tig0017749:5795-5814 | Msa1362260:intergenic | 45.0% | |
CTTCTTGCAGGTGATCTAAC+TGG | + | tig0017749:5830-5849 | Msa1362260:intergenic | 45.0% | |
CTTCTGCTTAAGCTTCTTGC+AGG | + | tig0017749:5842-5861 | Msa1362260:intergenic | 45.0% | |
CTTCTGCTTAAGCTTCTTGC+AGG | + | tig0017749:5842-5861 | Msa1362260:intergenic | 45.0% | |
CTTCTGCTTAAGCTTCTTGC+AGG | + | tig0017749:5842-5861 | Msa1362260:intergenic | 45.0% | |
CTTCTGCTTAAGCTTCTTGC+AGG | + | tig0017749:5842-5861 | Msa1362260:intergenic | 45.0% | |
CTTCTTGCAGGTGATCTAAC+TGG | + | tig0017749:5830-5849 | Msa1362260:intergenic | 45.0% | |
CTTCTGCTTAAGCTTCTTGC+AGG | + | tig0017749:5842-5861 | Msa1362260:intergenic | 45.0% | |
AGAAGCTTAAGCAGAAGCTC+TGG | - | tig0017749:6160-6179 | Msa1362260:intron | 45.0% | |
! | CTTAAGCAGAAGCTCTGGTA+GGG | - | tig0017749:6165-6184 | Msa1362260:intron | 45.0% |
GGCTAATGCTTCTCTTTGAG+GGG | + | tig0017749:6192-6211 | Msa1362260:intergenic | 45.0% | |
CGGCTAATGCTTCTCTTTGA+GGG | + | tig0017749:6193-6212 | Msa1362260:intergenic | 45.0% | |
TCGGCTAATGCTTCTCTTTG+AGG | + | tig0017749:6194-6213 | Msa1362260:intergenic | 45.0% | |
!! | CTGCGGCGATTATTTCTACT+GGG | + | tig0017749:6232-6251 | Msa1362260:intergenic | 45.0% |
!! | ACTGCGGCGATTATTTCTAC+TGG | + | tig0017749:6233-6252 | Msa1362260:intergenic | 45.0% |
GTGTTCTTCTCCTACGTACA+GGG | + | tig0017749:6273-6292 | Msa1362260:intergenic | 45.0% | |
TTCGCCAAAGCGTATCAGAA+GGG | - | tig0017749:6333-6352 | Msa1362260:intron | 45.0% | |
! | TTGTATCGGTATGACCTCAC+AGG | + | tig0017749:6418-6437 | Msa1362260:intergenic | 45.0% |
GTGAGGTCATACCGATACAA+TGG | - | tig0017749:6418-6437 | Msa1362260:intron | 45.0% | |
!! | GTTACAGAAGGTATTCCCCT+AGG | - | tig0017749:6553-6572 | Msa1362260:intron | 45.0% |
!! | CTACTTGCTTTTCGTGGAGA+TGG | + | tig0017749:7001-7020 | Msa1362260:intergenic | 45.0% |
!! | CTGTCTCTACTTGCTTTTCG+TGG | + | tig0017749:7007-7026 | Msa1362260:intergenic | 45.0% |
CACGAAAAGCAAGTAGAGAC+AGG | - | tig0017749:7005-7024 | Msa1362260:intron | 45.0% | |
! | AAGAGAGGCTTGGTCTCATA+CGG | - | tig0017749:7058-7077 | Msa1362260:intron | 45.0% |
GGGACCAAGAATTTCACCTT+TGG | + | tig0017749:7105-7124 | Msa1362260:intergenic | 45.0% | |
GTGAAATTCTTGGTCCCCTA+TGG | - | tig0017749:7108-7127 | Msa1362260:intron | 45.0% | |
! | TTCTTGGTCCCCTATGGTTT+TGG | - | tig0017749:7114-7133 | Msa1362260:intron | 45.0% |
! | TCTTGGTCCCCTATGGTTTT+GGG | - | tig0017749:7115-7134 | Msa1362260:intron | 45.0% |
CCAGCATTAAGCAAAGCAGA+AGG | + | tig0017749:7187-7206 | Msa1362260:intergenic | 45.0% | |
CCTTCTGCTTTGCTTAATGC+TGG | - | tig0017749:7184-7203 | Msa1362260:intron | 45.0% | |
! | ATTGCGGTATTTGGTGGAAC+TGG | - | tig0017749:7333-7352 | Msa1362260:five_prime_UTR | 45.0% |
CTCAAATGATTGTGCTACCG+AGG | + | tig0017749:7395-7414 | Msa1362260:intergenic | 45.0% | |
!! | TAAATAAATATAAATAAATC+TGG | - | tig0017749:635-654 | Msa1362260:CDS | 5.0% |
!! | CGAACCAAATGGATTGGGCT+TGG | + | tig0017749:86-105 | Msa1362260:intergenic | 50.0% |
!!! | TTCCAGTGGTTTTAACGGCG+GGG | + | tig0017749:204-223 | Msa1362260:intergenic | 50.0% |
AAACCACTGGAAAACGCTGC+CGG | - | tig0017749:212-231 | Msa1362260:three_prime_UTR | 50.0% | |
CTTCCTACGACGAAGAAGTC+CGG | + | tig0017749:234-253 | Msa1362260:intergenic | 50.0% | |
TTCCTTCGCTTCTCATCGTG+CGG | - | tig0017749:318-337 | Msa1362260:three_prime_UTR | 50.0% | |
ACTAGAAGCGACATCGAGTG+TGG | - | tig0017749:818-837 | Msa1362260:intron | 50.0% | |
CAGTCTTGGGAGCAACATCA+TGG | + | tig0017749:1486-1505 | Msa1362260:intergenic | 50.0% | |
GGTTGAACATGGCTTAGCAG+TGG | - | tig0017749:1928-1947 | Msa1362260:CDS | 50.0% | |
TGTAGGATACACAGGGCTGA+TGG | - | tig0017749:1974-1993 | Msa1362260:CDS | 50.0% | |
!! | TGCACTGCATTTTCAGGGAC+TGG | - | tig0017749:2750-2769 | Msa1362260:intron | 50.0% |
!! | ACTGCATTTTCAGGGACTGG+TGG | - | tig0017749:2753-2772 | Msa1362260:intron | 50.0% |
! | ATTGCCTGATTGTGCTGCTG+TGG | - | tig0017749:3106-3125 | Msa1362260:intron | 50.0% |
! | TTGCCTGATTGTGCTGCTGT+GGG | - | tig0017749:3107-3126 | Msa1362260:intron | 50.0% |
!! | GTCTTTGGGAGGCTTGTTGA+AGG | - | tig0017749:3152-3171 | Msa1362260:intron | 50.0% |
!! | GAGGCTTGTTGAAGGGCTTA+AGG | - | tig0017749:3160-3179 | Msa1362260:intron | 50.0% |
TGCCTGGTTGATTAGTGCGA+TGG | - | tig0017749:4244-4263 | Msa1362260:intron | 50.0% | |
GACCATCGCACTAATCAACC+AGG | + | tig0017749:4249-4268 | Msa1362260:intergenic | 50.0% | |
CAGGGAATCTGGCAGTGATT+CGG | - | tig0017749:4858-4877 | Msa1362260:intron | 50.0% | |
ACTGAAGTCTCCCTCACTTG+TGG | - | tig0017749:5141-5160 | Msa1362260:intron | 50.0% | |
AATGGAGAGCGGCATAGCAA+TGG | - | tig0017749:5241-5260 | Msa1362260:intron | 50.0% | |
CTCTTACTCATGGGTCGCTT+AGG | + | tig0017749:5440-5459 | Msa1362260:intergenic | 50.0% | |
TCCTCCTTGATAGACGAGGA+GGG | + | tig0017749:5553-5572 | Msa1362260:intergenic | 50.0% | |
CAGTAGTCCTGTCAGAAGCA+TGG | - | tig0017749:5580-5599 | Msa1362260:intron | 50.0% | |
! | AGGAGTCCTGTTAGGAGCAT+CGG | - | tig0017749:5605-5624 | Msa1362260:intron | 50.0% |
!! | GAAGCATTGACAGGAGTCCT+AGG | - | tig0017749:5642-5661 | Msa1362260:intron | 50.0% |
! | AGGAGTCCTAGGAGAAGCAT+CGG | - | tig0017749:5653-5672 | Msa1362260:intron | 50.0% |
CTTCTTGCAGGCGATCTAAC+TGG | + | tig0017749:6001-6020 | Msa1362260:intergenic | 50.0% | |
! | GCTTAAGCAGAAGCTCTGGT+AGG | - | tig0017749:6164-6183 | Msa1362260:intron | 50.0% |
CATTAGCCGAAGTCCTGTCA+GGG | - | tig0017749:6204-6223 | Msa1362260:CDS | 50.0% | |
GGTGTTCTTCTCCTACGTAC+AGG | + | tig0017749:6274-6293 | Msa1362260:intergenic | 50.0% | |
GTAGGAGAAGAACACCTCGT+GGG | - | tig0017749:6278-6297 | Msa1362260:intron | 50.0% | |
TAGGAGAAGAACACCTCGTG+GGG | - | tig0017749:6279-6298 | Msa1362260:intron | 50.0% | |
! | ATACGCTTTGGCGAAGCATC+AGG | + | tig0017749:6328-6347 | Msa1362260:intergenic | 50.0% |
CTTCGCCAAAGCGTATCAGA+AGG | - | tig0017749:6332-6351 | Msa1362260:intron | 50.0% | |
TCGCCAAAGCGTATCAGAAG+GGG | - | tig0017749:6334-6353 | Msa1362260:intron | 50.0% | |
CTTCCCCTTCTGATACGCTT+TGG | + | tig0017749:6340-6359 | Msa1362260:intergenic | 50.0% | |
AAGCGTATCAGAAGGGGAAG+AGG | - | tig0017749:6340-6359 | Msa1362260:intron | 50.0% | |
! | GAAGGTATAGAACCCCTTCC+CGG | - | tig0017749:6389-6408 | Msa1362260:intron | 50.0% |
!! | TGGACTTCTGAAACGCCTAG+GGG | + | tig0017749:6571-6590 | Msa1362260:intergenic | 50.0% |
!! | GTGGACTTCTGAAACGCCTA+GGG | + | tig0017749:6572-6591 | Msa1362260:intergenic | 50.0% |
! | ATGGTGATCGGCTTCTCCTT+CGG | + | tig0017749:6796-6815 | Msa1362260:intergenic | 50.0% |
TGGGCGAAACAGATGGTGAT+CGG | + | tig0017749:6808-6827 | Msa1362260:intergenic | 50.0% | |
TGCCTTTCTACACGAGGAGA+GGG | + | tig0017749:6923-6942 | Msa1362260:intergenic | 50.0% | |
ATGCCTTTCTACACGAGGAG+AGG | + | tig0017749:6924-6943 | Msa1362260:intergenic | 50.0% | |
GACGAATGCCTTTCTACACG+AGG | + | tig0017749:6929-6948 | Msa1362260:intergenic | 50.0% | |
!! | AAAGGCATTCGTCGTACTCC+CGG | - | tig0017749:6936-6955 | Msa1362260:intron | 50.0% |
ATTTCACTGGACTCCTGCTC+CGG | + | tig0017749:6958-6977 | Msa1362260:intergenic | 50.0% | |
GCAGGAGTCCAGTGAAATCT+AGG | - | tig0017749:6960-6979 | Msa1362260:intron | 50.0% | |
TCATCATCCAGAAGCCCAGA+TGG | - | tig0017749:7034-7053 | Msa1362260:intron | 50.0% | |
TCTCTTTCCATCTGGGCTTC+TGG | + | tig0017749:7044-7063 | Msa1362260:intergenic | 50.0% | |
AGAAGCCCAGATGGAAAGAG+AGG | - | tig0017749:7043-7062 | Msa1362260:intron | 50.0% | |
CCAAGCCTCTCTTTCCATCT+GGG | + | tig0017749:7051-7070 | Msa1362260:intergenic | 50.0% | |
ACCAAGCCTCTCTTTCCATC+TGG | + | tig0017749:7052-7071 | Msa1362260:intergenic | 50.0% | |
CGGGCCAAAGGTGAAATTCT+TGG | - | tig0017749:7098-7117 | Msa1362260:intron | 50.0% | |
CCGCAATAACTCTACCACCA+GGG | + | tig0017749:7320-7339 | Msa1362260:intergenic | 50.0% | |
CCCTGGTGGTAGAGTTATTG+CGG | - | tig0017749:7317-7336 | Msa1362260:five_prime_UTR | 50.0% | |
ACCGCAATAACTCTACCACC+AGG | + | tig0017749:7321-7340 | Msa1362260:intergenic | 50.0% | |
TTTGTTGCCTGCCATGTCCT+CGG | - | tig0017749:7375-7394 | Msa1362260:five_prime_UTR | 50.0% | |
TGATTGTGCTACCGAGGACA+TGG | + | tig0017749:7389-7408 | Msa1362260:intergenic | 50.0% | |
AGGGCCGTTTCCGAACCAAA+TGG | + | tig0017749:97-116 | Msa1362260:intergenic | 55.0% | |
GGGCAAAATGGCAGTGCAGT+GGG | + | tig0017749:144-163 | Msa1362260:intergenic | 55.0% | |
AACCCCGCCGTTAAAACCAC+TGG | - | tig0017749:199-218 | Msa1362260:three_prime_UTR | 55.0% | |
CGGACTTCTTCGTCGTAGGA+AGG | - | tig0017749:232-251 | Msa1362260:three_prime_UTR | 55.0% | |
ACCACGATCCCGCAATCAAG+CGG | - | tig0017749:392-411 | Msa1362260:three_prime_UTR | 55.0% | |
TCTGTGCACCGCTTGATTGC+GGG | + | tig0017749:403-422 | Msa1362260:intergenic | 55.0% | |
CTCTGTGCACCGCTTGATTG+CGG | + | tig0017749:404-423 | Msa1362260:intergenic | 55.0% | |
CAATCACAGAAAGGTGGGGG+AGG | + | tig0017749:1740-1759 | Msa1362260:intergenic | 55.0% | |
GGGCCATCATGCTTTAGCCT+AGG | + | tig0017749:2917-2936 | Msa1362260:intergenic | 55.0% | |
AGGCTAAAGCATGATGGCCC+TGG | - | tig0017749:2917-2936 | Msa1362260:intron | 55.0% | |
GGCTAAAGCATGATGGCCCT+GGG | - | tig0017749:2918-2937 | Msa1362260:intron | 55.0% | |
! | TGGCCCTGGGCTTTTGTCAA+TGG | - | tig0017749:2931-2950 | Msa1362260:intron | 55.0% |
! | TGCCTGATTGTGCTGCTGTG+GGG | - | tig0017749:3108-3127 | Msa1362260:intron | 55.0% |
! | CTGCTGTGGGGCAATTTTGC+AGG | - | tig0017749:3120-3139 | Msa1362260:intron | 55.0% |
GGAAAGGATGGAGCCTGTGA+AGG | - | tig0017749:3518-3537 | Msa1362260:intron | 55.0% | |
GGAGGAAGGGAAAGCTCAAG+AGG | - | tig0017749:3558-3577 | Msa1362260:intron | 55.0% | |
GAGGGAGACTTCAGTTCAGC+TGG | + | tig0017749:5136-5155 | Msa1362260:intergenic | 55.0% | |
GAGCGGCATAGCAATGGTAC+TGG | - | tig0017749:5247-5266 | Msa1362260:intron | 55.0% | |
CTCTTGCTCCTACTCCTCCT+AGG | + | tig0017749:5476-5495 | Msa1362260:intergenic | 55.0% | |
GGAGGGCTTCTACTGACACT+TGG | + | tig0017749:5536-5555 | Msa1362260:intergenic | 55.0% | |
GAAGCCCTCCTCGTCTATCA+AGG | - | tig0017749:5546-5565 | Msa1362260:intron | 55.0% | |
CTCCTCCTTGATAGACGAGG+AGG | + | tig0017749:5554-5573 | Msa1362260:intergenic | 55.0% | |
! | GTCCTGTCAGAAGCATGGAC+AGG | - | tig0017749:5585-5604 | Msa1362260:intron | 55.0% |
CTCCTGTCCATGCTTCTGAC+AGG | + | tig0017749:5590-5609 | Msa1362260:intergenic | 55.0% | |
GCATGGACAGGAGTCCTGTT+AGG | - | tig0017749:5597-5616 | Msa1362260:intron | 55.0% | |
!! | GTCCTAGGAGAAGCATCGGA+AGG | - | tig0017749:5657-5676 | Msa1362260:intron | 55.0% |
CTCCTTCCGATGCTTCTCCT+AGG | + | tig0017749:5662-5681 | Msa1362260:intergenic | 55.0% | |
CTTCTTGCAGGCGCTCTAAC+TGG | + | tig0017749:5902-5921 | Msa1362260:intergenic | 55.0% | |
CTTCTTGCAGGCGCTCTAAC+TGG | + | tig0017749:5902-5921 | Msa1362260:intergenic | 55.0% | |
GCATTAGCCGAAGTCCTGTC+AGG | - | tig0017749:6203-6222 | Msa1362260:CDS | 55.0% | |
TTTCTACTGGGTGCCCTGAC+AGG | + | tig0017749:6220-6239 | Msa1362260:intergenic | 55.0% | |
CTTCTCCTACGTACAGGGCT+AGG | + | tig0017749:6268-6287 | Msa1362260:intergenic | 55.0% | |
CGTAGGAGAAGAACACCTCG+TGG | - | tig0017749:6277-6296 | Msa1362260:intron | 55.0% | |
AGGAGAAGAACACCTCGTGG+GGG | - | tig0017749:6280-6299 | Msa1362260:intron | 55.0% | |
CTAGACAAACTACCCCCACG+AGG | + | tig0017749:6295-6314 | Msa1362260:intergenic | 55.0% | |
GTATGACCTCACAGGAGACC+GGG | + | tig0017749:6410-6429 | Msa1362260:intergenic | 55.0% | |
GGTATGACCTCACAGGAGAC+CGG | + | tig0017749:6411-6430 | Msa1362260:intergenic | 55.0% | |
!! | GGTGGACTTCTGAAACGCCT+AGG | + | tig0017749:6573-6592 | Msa1362260:intergenic | 55.0% |
GGCGTTTCAGAAGTCCACCA+CGG | - | tig0017749:6574-6593 | Msa1362260:intron | 55.0% | |
GCGTTTCAGAAGTCCACCAC+GGG | - | tig0017749:6575-6594 | Msa1362260:intron | 55.0% | |
CGTTTCAGAAGTCCACCACG+GGG | - | tig0017749:6576-6595 | Msa1362260:intron | 55.0% | |
ATCTTCGAGCTCGGTAGCGT+GGG | + | tig0017749:6832-6851 | Msa1362260:intergenic | 55.0% | |
TATCTTCGAGCTCGGTAGCG+TGG | + | tig0017749:6833-6852 | Msa1362260:intergenic | 55.0% | |
TTCGCATTCGCTCCCCAGTT+CGG | - | tig0017749:6873-6892 | Msa1362260:intron | 55.0% | |
GCCTTTCTACACGAGGAGAG+GGG | + | tig0017749:6922-6941 | Msa1362260:intergenic | 55.0% | |
TTTCACTGGACTCCTGCTCC+GGG | + | tig0017749:6957-6976 | Msa1362260:intergenic | 55.0% | |
CCCAGATGGAAAGAGAGGCT+TGG | - | tig0017749:7048-7067 | Msa1362260:intron | 55.0% | |
TTTCACCTTTGGCCCGAGTC+AGG | + | tig0017749:7094-7113 | Msa1362260:intergenic | 55.0% | |
GGGGCAAAATGGCAGTGCAG+TGG | + | tig0017749:145-164 | Msa1362260:intergenic | 60.0% | |
! | AGTCCGGCAGCGTTTTCCAG+TGG | + | tig0017749:218-237 | Msa1362260:intergenic | 60.0% |
CTGCCGGACTTCTTCGTCGT+AGG | - | tig0017749:228-247 | Msa1362260:three_prime_UTR | 60.0% | |
GTCGTAGGAAGGAATCCCGC+CGG | - | tig0017749:243-262 | Msa1362260:three_prime_UTR | 60.0% | |
TGCCGCACGATGAGAAGCGA+AGG | + | tig0017749:323-342 | Msa1362260:intergenic | 60.0% | |
GCTTGATTGCGGGATCGTGG+TGG | + | tig0017749:393-412 | Msa1362260:intergenic | 60.0% | |
ACCGCTTGATTGCGGGATCG+TGG | + | tig0017749:396-415 | Msa1362260:intergenic | 60.0% | |
ATCAAGCGGTGCACAGAGCG+TGG | - | tig0017749:406-425 | Msa1362260:three_prime_UTR | 60.0% | |
TGCCCCACAGCAGCACAATC+AGG | + | tig0017749:3113-3132 | Msa1362260:intergenic | 60.0% | |
AGAGAGGCAGCCTGACGTGA+TGG | - | tig0017749:5297-5316 | Msa1362260:intron | 60.0% | |
GGAGGAGTAGGAGCAAGAGC+CGG | - | tig0017749:5477-5496 | Msa1362260:intron | 60.0% | |
GCCCTCCTCGTCTATCAAGG+AGG | - | tig0017749:5549-5568 | Msa1362260:intron | 60.0% | |
!! | GTCCTGTTAGGAGCATCGGC+AGG | - | tig0017749:5609-5628 | Msa1362260:intron | 60.0% |
CTCCTGCCGATGCTCCTAAC+AGG | + | tig0017749:5614-5633 | Msa1362260:intergenic | 60.0% | |
!! | GAGAAGCATCGGAAGGAGCC+CGG | - | tig0017749:5664-5683 | Msa1362260:intron | 60.0% |
TGCTCCGGCGGGATCTTACA+GGG | + | tig0017749:5763-5782 | Msa1362260:intergenic | 60.0% | |
! | CTCTGGGAGAACTCCTGCTC+CGG | + | tig0017749:5778-5797 | Msa1362260:intergenic | 60.0% |
TGGGTGCCCTGACAGGACTT+CGG | + | tig0017749:6213-6232 | Msa1362260:intergenic | 60.0% | |
GGAGTCCTAGCCCTGTACGT+AGG | - | tig0017749:6260-6279 | Msa1362260:intron | 60.0% | |
ACCTCACAGGAGACCGGGAA+GGG | + | tig0017749:6405-6424 | Msa1362260:intergenic | 60.0% | |
CTTGGAGGAGTTCTTCCCCG+TGG | + | tig0017749:6594-6613 | Msa1362260:intergenic | 60.0% | |
CACGGGGAAGAACTCCTCCA+AGG | - | tig0017749:6592-6611 | Msa1362260:intron | 60.0% | |
AGCGAATGCGAACTGGGCTG+CGG | + | tig0017749:6865-6884 | Msa1362260:intergenic | 60.0% | |
CTGGGGAGCGAATGCGAACT+GGG | + | tig0017749:6871-6890 | Msa1362260:intergenic | 60.0% | |
ACTGGGGAGCGAATGCGAAC+TGG | + | tig0017749:6872-6891 | Msa1362260:intergenic | 60.0% | |
AGGAGAGGGGCGAGATCGAT+CGG | + | tig0017749:6909-6928 | Msa1362260:intergenic | 60.0% | |
GCCCCTCTCCTCGTGTAGAA+AGG | - | tig0017749:6918-6937 | Msa1362260:intron | 60.0% | |
ATTCGTCGTACTCCCGGAGC+AGG | - | tig0017749:6942-6961 | Msa1362260:intron | 60.0% | |
! | GGCTTGGTCTCATACGGCGA+TGG | - | tig0017749:7064-7083 | Msa1362260:intron | 60.0% |
CGGCGATGGTTCTCCTGACT+CGG | - | tig0017749:7078-7097 | Msa1362260:intron | 60.0% | |
GGCGATGGTTCTCCTGACTC+GGG | - | tig0017749:7079-7098 | Msa1362260:intron | 60.0% | |
!! | GTTCTCCTGACTCGGGCCAA+AGG | - | tig0017749:7086-7105 | Msa1362260:intron | 60.0% |
TGTGCTACCGAGGACATGGC+AGG | + | tig0017749:7385-7404 | Msa1362260:intergenic | 60.0% | |
CATCGGAAGGAGCCCGGTGA+GGG | - | tig0017749:5670-5689 | Msa1362260:intron | 65.0% | |
ATCGGAAGGAGCCCGGTGAG+GGG | - | tig0017749:5671-5690 | Msa1362260:intron | 65.0% | |
GAGGGGCAGGAAGGGGAGAA+AGG | - | tig0017749:5688-5707 | Msa1362260:intron | 65.0% | |
GGAGCCCTGTAAGATCCCGC+CGG | - | tig0017749:5756-5775 | Msa1362260:CDS | 65.0% | |
CTGCTCCGGCGGGATCTTAC+AGG | + | tig0017749:5764-5783 | Msa1362260:intergenic | 65.0% | |
CTGTAAGATCCCGCCGGAGC+AGG | - | tig0017749:5762-5781 | Msa1362260:CDS | 65.0% | |
TGGGAGAACTCCTGCTCCGG+CGG | + | tig0017749:5775-5794 | Msa1362260:intergenic | 65.0% | |
CCTCACAGGAGACCGGGAAG+GGG | + | tig0017749:6404-6423 | Msa1362260:intergenic | 65.0% | |
GACCTCACAGGAGACCGGGA+AGG | + | tig0017749:6406-6425 | Msa1362260:intergenic | 65.0% | |
GGAGGAGTTCTTCCCCGTGG+TGG | + | tig0017749:6591-6610 | Msa1362260:intergenic | 65.0% | |
!! | CGTGGGCTGGGCGAAACAGA+TGG | + | tig0017749:6815-6834 | Msa1362260:intergenic | 65.0% |
!! | GGGGGAAGTGCTCCGAACTG+GGG | + | tig0017749:6888-6907 | Msa1362260:intergenic | 65.0% |
!! | CGGGGGAAGTGCTCCGAACT+GGG | + | tig0017749:6889-6908 | Msa1362260:intergenic | 65.0% |
!! | TCGGGGGAAGTGCTCCGAAC+TGG | + | tig0017749:6890-6909 | Msa1362260:intergenic | 65.0% |
AGAGGGGCGAGATCGATCGG+GGG | + | tig0017749:6906-6925 | Msa1362260:intergenic | 65.0% | |
GAGAGGGGCGAGATCGATCG+GGG | + | tig0017749:6907-6926 | Msa1362260:intergenic | 65.0% | |
GGAGAGGGGCGAGATCGATC+GGG | + | tig0017749:6908-6927 | Msa1362260:intergenic | 65.0% | |
TCGCATCCTCGCGCGCGCTA+CGG | + | tig0017749:346-365 | Msa1362260:intergenic | 70.0% | |
CGGTGCACAGAGCGTGGCGT+TGG | - | tig0017749:412-431 | Msa1362260:three_prime_UTR | 70.0% | |
GCATCGGAAGGAGCCCGGTG+AGG | - | tig0017749:5669-5688 | Msa1362260:intron | 70.0% | |
AGCCCGGTGAGGGGCAGGAA+GGG | - | tig0017749:5680-5699 | Msa1362260:intron | 70.0% | |
TCCCCTTCCTGCCCCTCACC+GGG | + | tig0017749:5685-5704 | Msa1362260:intergenic | 70.0% | |
CTCCCCTTCCTGCCCCTCAC+CGG | + | tig0017749:5686-5705 | Msa1362260:intergenic | 70.0% | |
GGGAGAACTCCTGCTCCGGC+GGG | + | tig0017749:5774-5793 | Msa1362260:intergenic | 70.0% | |
CCCCTTCCCGGTCTCCTGTG+AGG | - | tig0017749:6401-6420 | Msa1362260:intron | 70.0% | |
CGAGCTCGGTAGCGTGGGCT+GGG | + | tig0017749:6827-6846 | Msa1362260:intergenic | 70.0% | |
TCGAGCTCGGTAGCGTGGGC+TGG | + | tig0017749:6828-6847 | Msa1362260:intergenic | 70.0% | |
GAAGGAGCCCGGTGAGGGGC+AGG | - | tig0017749:5675-5694 | Msa1362260:intron | 75.0% | |
GAGCCCGGTGAGGGGCAGGA+AGG | - | tig0017749:5679-5698 | Msa1362260:intron | 75.0% | |
GCCCGGTGAGGGGCAGGAAG+GGG | - | tig0017749:5681-5700 | Msa1362260:intron | 75.0% | |
! | GCGGCACCGTAGCGCGCGCG+AGG | - | tig0017749:337-356 | Msa1362260:three_prime_UTR | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0017749 | gene | 15 | 7555 | 15 | ID=Msa1362260;Name=Msa1362260 |
tig0017749 | mRNA | 15 | 7555 | 15 | ID=Msa1362260-mRNA-1;Parent=Msa1362260;Name=Msa1362260-mRNA-1;_AED=0.12;_eAED=0.12;_QI=260|0.76|0.85|1|0.84|0.78|14|444|871 |
tig0017749 | exon | 15 | 780 | 15 | ID=Msa1362260-mRNA-1:exon:12946;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 957 | 1025 | 957 | ID=Msa1362260-mRNA-1:exon:12945;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 1112 | 2149 | 1112 | ID=Msa1362260-mRNA-1:exon:12944;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 2229 | 2433 | 2229 | ID=Msa1362260-mRNA-1:exon:12943;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 2603 | 2709 | 2603 | ID=Msa1362260-mRNA-1:exon:12942;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 3724 | 3928 | 3724 | ID=Msa1362260-mRNA-1:exon:12941;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 3938 | 4081 | 3938 | ID=Msa1362260-mRNA-1:exon:12940;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 4301 | 4428 | 4301 | ID=Msa1362260-mRNA-1:exon:12939;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 4547 | 4664 | 4547 | ID=Msa1362260-mRNA-1:exon:12938;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 5179 | 5227 | 5179 | ID=Msa1362260-mRNA-1:exon:12937;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 5711 | 5799 | 5711 | ID=Msa1362260-mRNA-1:exon:12936;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 6038 | 6092 | 6038 | ID=Msa1362260-mRNA-1:exon:12935;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 6176 | 6266 | 6176 | ID=Msa1362260-mRNA-1:exon:12934;Parent=Msa1362260-mRNA-1 |
tig0017749 | exon | 7300 | 7555 | 7300 | ID=Msa1362260-mRNA-1:exon:12933;Parent=Msa1362260-mRNA-1 |
tig0017749 | five_prime_UTR | 7300 | 7555 | 7300 | ID=Msa1362260-mRNA-1:five_prime_utr;Parent=Msa1362260-mRNA-1 |
tig0017749 | five_prime_UTR | 6263 | 6266 | 6263 | ID=Msa1362260-mRNA-1:five_prime_utr;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 6176 | 6262 | 6176 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 6038 | 6092 | 6038 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 5711 | 5799 | 5711 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 5179 | 5227 | 5179 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 4547 | 4664 | 4547 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 4301 | 4428 | 4301 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 3938 | 4081 | 3938 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 3724 | 3928 | 3724 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 2603 | 2709 | 2603 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 2229 | 2433 | 2229 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 1112 | 2149 | 1112 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 957 | 1025 | 957 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | CDS | 459 | 780 | 459 | ID=Msa1362260-mRNA-1:cds;Parent=Msa1362260-mRNA-1 |
tig0017749 | three_prime_UTR | 15 | 458 | 15 | ID=Msa1362260-mRNA-1:three_prime_utr;Parent=Msa1362260-mRNA-1 |
Gene Sequence |
Protein sequence |