Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383470 | XP_003603582.1 | 98.633 | 439 | 6 | 0 | 1 | 439 | 1 | 439 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383470 | G7J2W4 | 98.633 | 439 | 6 | 0 | 1 | 439 | 1 | 439 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0383470 | Msa1416120 | 0.868925 | 4.542123e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383470 | MtrunA17_Chr3g0139321 | 98.633 | 439 | 6 | 0 | 1 | 439 | 1 | 439 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383470 | AT4G31340.1 | 58.924 | 409 | 162 | 4 | 31 | 439 | 35 | 437 | 4.27e-166 | 474 |
| Msa0383470 | AT2G24420.1 | 54.779 | 429 | 183 | 5 | 17 | 439 | 17 | 440 | 4.27e-161 | 462 |
| Msa0383470 | AT2G24420.2 | 54.779 | 429 | 183 | 5 | 17 | 439 | 17 | 440 | 4.27e-161 | 462 |
| Msa0383470 | AT4G31340.2 | 58.961 | 385 | 154 | 2 | 31 | 415 | 35 | 415 | 1.96e-156 | 449 |
| Msa0383470 | AT4G30090.1 | 30.617 | 405 | 212 | 7 | 40 | 437 | 44 | 386 | 2.39e-52 | 181 |
Find 132 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAATTGAGTTGATCTAAT+TGG | 0.198323 | 3_1:-86395363 | None:intergenic |
| AAGAAGGTTGTTCTCGCTTA+TGG | 0.201487 | 3_1:+86398456 | Msa0383470:CDS |
| AAGAATAAACCAAATGAAAA+AGG | 0.209802 | 3_1:-86401678 | None:intergenic |
| AAGTAACGAAGGAGAAAATT+AGG | 0.226102 | 3_1:-86395291 | None:intergenic |
| AAAAGGCACAAGCTGGAAAA+TGG | 0.236033 | 3_1:+86397835 | Msa0383470:CDS |
| GTTTGGGTGTTCATGTATTA+TGG | 0.244150 | 3_1:+86401456 | Msa0383470:three_prime_UTR |
| ACTCTAGCTATTAAGATAAT+AGG | 0.265678 | 3_1:-86399398 | None:intergenic |
| TATGCAGGCCTCTGCCCTTC+TGG | 0.268328 | 3_1:+86399370 | Msa0383470:intron |
| GAAACTTATACCTGATAATA+AGG | 0.301355 | 3_1:-86398274 | None:intergenic |
| AACACAAGAATTGAAGAAAA+AGG | 0.318070 | 3_1:+86395686 | Msa0383470:CDS |
| TTGGATTGATACCGAGGAAT+TGG | 0.318579 | 3_1:-86395390 | None:intergenic |
| GAATGAGGTTGCTTCTCTTC+AGG | 0.323946 | 3_1:+86395773 | Msa0383470:CDS |
| ATTCTAGGCCCTAGAGAAAA+AGG | 0.331966 | 3_1:+86397818 | Msa0383470:intron |
| ACCTCTTGCTACTAAAGAAT+TGG | 0.345133 | 3_1:+86399247 | Msa0383470:CDS |
| GAATGCTACTCAACTTATCT+TGG | 0.345760 | 3_1:-86395740 | None:intergenic |
| ATCTAAGACTAACCAGAAAA+TGG | 0.347393 | 3_1:-86399429 | None:intergenic |
| TAACGTCATGAAATTGAAAA+TGG | 0.347523 | 3_1:-86401795 | None:intergenic |
| TCTCGCTTATGGGAATTTCT+TGG | 0.348918 | 3_1:+86398467 | Msa0383470:CDS |
| GTTGGGCGCACAATATTGTT+TGG | 0.350041 | 3_1:+86401439 | Msa0383470:three_prime_UTR |
| AGCTTTGTTGGCGGTGTTGA+TGG | 0.364823 | 3_1:+86395231 | Msa0383470:exon |
| ATTCATGGTTTATTCTTTGT+TGG | 0.369797 | 3_1:+86401641 | Msa0383470:three_prime_UTR |
| CTTCATGTTATCTACTTGTC+TGG | 0.380045 | 3_1:-86399659 | None:intergenic |
| TTCTGTATCTTGCAGATGGC+TGG | 0.383427 | 3_1:+86401326 | Msa0383470:intron |
| ATGGTGCTTGGCTTCCTCCT+TGG | 0.385003 | 3_1:+86397479 | Msa0383470:CDS |
| TATCATCTGCAGCAGCAAAA+AGG | 0.397213 | 3_1:+86399574 | Msa0383470:intron |
| ATCACACAGAAACTGATTCA+TGG | 0.400074 | 3_1:+86401626 | Msa0383470:three_prime_UTR |
| AGAAGGTTGTTCTCGCTTAT+GGG | 0.403445 | 3_1:+86398457 | Msa0383470:CDS |
| CATATAAAGGTGGTGGATGT+AGG | 0.404542 | 3_1:-86394946 | None:intergenic |
| ATGTGTAGATCCTTATTATC+AGG | 0.406758 | 3_1:+86398264 | Msa0383470:CDS |
| AATCTTGATACCAAACCCTT+TGG | 0.418992 | 3_1:+86395127 | Msa0383470:five_prime_UTR |
| TTGGGCGCACAATATTGTTT+GGG | 0.423150 | 3_1:+86401440 | Msa0383470:three_prime_UTR |
| ATAGTACAGACAACCGGAAT+AGG | 0.424295 | 3_1:-86401597 | None:intergenic |
| TAGATTTAGAGCGCCTATTC+CGG | 0.428852 | 3_1:+86401584 | Msa0383470:three_prime_UTR |
| GATACCGAGGAATTGGATCT+TGG | 0.433047 | 3_1:-86395383 | None:intergenic |
| GGACGTTTCACTGTAGAGTT+GGG | 0.436568 | 3_1:+86401422 | Msa0383470:three_prime_UTR |
| GTCATTGGATGCCGAGGAGC+AGG | 0.448017 | 3_1:+86395968 | Msa0383470:CDS |
| TTGCAGATGGCTGGCACATG+TGG | 0.454398 | 3_1:+86401335 | Msa0383470:intron |
| GGGAGCAAGTGCGTCCTTTG+AGG | 0.460893 | 3_1:-86398221 | None:intergenic |
| AGAAAGTGAACTGGGAATCT+CGG | 0.463402 | 3_1:+86396150 | Msa0383470:CDS |
| AAAGGCACAAGCTGGAAAAT+GGG | 0.463620 | 3_1:+86397836 | Msa0383470:CDS |
| TGCAGATGGCTGGCACATGT+GGG | 0.465313 | 3_1:+86401336 | Msa0383470:intron |
| GACCACTGTTCTTTCACAGC+TGG | 0.466702 | 3_1:-86398130 | None:intergenic |
| GTTGGAAGTGATATCTCAAA+AGG | 0.468095 | 3_1:+86397654 | Msa0383470:CDS |
| TAAAGAATTGGAATGGTTTG+CGG | 0.470283 | 3_1:+86399259 | Msa0383470:CDS |
| CAGTGCTTGCACATGAGGTT+CGG | 0.473641 | 3_1:-86398170 | None:intergenic |
| TAGCAAGCCATACATTGATC+AGG | 0.474392 | 3_1:+86398374 | Msa0383470:CDS |
| AGTAACGAAGGAGAAAATTA+GGG | 0.474409 | 3_1:-86395290 | None:intergenic |
| AGTCCGTGGCTGAGAGTCAT+TGG | 0.476512 | 3_1:+86397611 | Msa0383470:intron |
| TTAGTTAACTTGGTGATTTG+TGG | 0.480086 | 3_1:+86401755 | Msa0383470:three_prime_UTR |
| AAAACAGTGAGAAAGTGAAC+TGG | 0.480727 | 3_1:+86396141 | Msa0383470:CDS |
| TCCGAACGAAGCTTTGTTGG+CGG | 0.488781 | 3_1:+86395222 | Msa0383470:five_prime_UTR |
| AATAAACATATACTTGAAAG+TGG | 0.489711 | 3_1:-86401562 | None:intergenic |
| AGGACGTTTCACTGTAGAGT+TGG | 0.493477 | 3_1:+86401421 | Msa0383470:three_prime_UTR |
| AGAACAACCTTCTTTGTGTA+GGG | 0.494541 | 3_1:-86398447 | None:intergenic |
| GAAGTCAGTGCTTGCACATG+AGG | 0.495088 | 3_1:-86398175 | None:intergenic |
| AACATAAAAGAGTGAGTACC+AGG | 0.495735 | 3_1:-86401499 | None:intergenic |
| ATGATACTGTTTAGTTAACT+TGG | 0.502504 | 3_1:+86401745 | Msa0383470:three_prime_UTR |
| TGTACACTATATTCGTAGTA+AGG | 0.505415 | 3_1:+86397507 | Msa0383470:CDS |
| GAAAGTGAACTGGGAATCTC+GGG | 0.506911 | 3_1:+86396151 | Msa0383470:CDS |
| CATTCAATCCTTGCAGAATG+AGG | 0.508270 | 3_1:+86395758 | Msa0383470:CDS |
| ATGATCAGACTCATGGTGCT+TGG | 0.513875 | 3_1:+86397467 | Msa0383470:intron |
| ACGTCTCTTGGACAGTAGCT+TGG | 0.519002 | 3_1:-86399202 | None:intergenic |
| GTTATATTTGTTATTAAACC+TGG | 0.519899 | 3_1:+86401481 | Msa0383470:three_prime_UTR |
| TTGCTACTAAAGAATTGGAA+TGG | 0.520379 | 3_1:+86399252 | Msa0383470:CDS |
| TATTTAGGAAGAAATGTTGA+AGG | 0.522472 | 3_1:+86397074 | Msa0383470:intron |
| AAACTTATAGTACAGACAAC+CGG | 0.522653 | 3_1:-86401603 | None:intergenic |
| ACCGCCAACAAAGCTTCGTT+CGG | 0.522762 | 3_1:-86395223 | None:intergenic |
| AAAGGAACATATAAAGGTGG+TGG | 0.525507 | 3_1:-86394953 | None:intergenic |
| ACAAGTAGATAACATGAAGT+TGG | 0.525848 | 3_1:+86399663 | Msa0383470:exon |
| AGATAATAGGCAAGGCCAGA+AGG | 0.525870 | 3_1:-86399385 | None:intergenic |
| TCCAATTCTTTAGTAGCAAG+AGG | 0.528573 | 3_1:-86399248 | None:intergenic |
| TGCCACTGCATATCATCGCC+AGG | 0.528771 | 3_1:+86398494 | Msa0383470:CDS |
| GTAGCGACCTGATCAATGTA+TGG | 0.537102 | 3_1:-86398381 | None:intergenic |
| AGCTTTACGACGAGTGTGGT+GGG | 0.538967 | 3_1:-86399624 | None:intergenic |
| CTACATATTTATTTGAACGT+GGG | 0.542254 | 3_1:+86401360 | Msa0383470:three_prime_UTR |
| TGCCGGTGAACTACAGAAGC+AGG | 0.548974 | 3_1:+86396010 | Msa0383470:CDS |
| AGGCAAGGCCAGAAGGGCAG+AGG | 0.549576 | 3_1:-86399378 | None:intergenic |
| TGAACATGGGAAGCCTCTGT+TGG | 0.550076 | 3_1:+86397636 | Msa0383470:CDS |
| GGAAAGGCTCATGCACGTGC+CGG | 0.552710 | 3_1:+86395993 | Msa0383470:CDS |
| GATAACATGAAGTTGGCTCC+TGG | 0.552779 | 3_1:+86399670 | Msa0383470:exon |
| GAGAGTCATTGGAATGAACA+TGG | 0.556843 | 3_1:+86397622 | Msa0383470:CDS |
| TTTCTCCTTCGTTACTTCCG+AGG | 0.559854 | 3_1:+86395297 | Msa0383470:CDS |
| TGCCGAGGAGCAGGTTGGAA+AGG | 0.563199 | 3_1:+86395977 | Msa0383470:CDS |
| CTTGGTGATTTGTGGTTCAG+TGG | 0.564093 | 3_1:+86401763 | Msa0383470:three_prime_UTR |
| TACATATTTATTTGAACGTG+GGG | 0.566874 | 3_1:+86401361 | Msa0383470:three_prime_UTR |
| ACAGGTTCAAAAGATAAATG+AGG | 0.567365 | 3_1:+86396907 | Msa0383470:intron |
| TAGCTTTACGACGAGTGTGG+TGG | 0.567556 | 3_1:-86399625 | None:intergenic |
| GAGAACAACCTTCTTTGTGT+AGG | 0.572587 | 3_1:-86398448 | None:intergenic |
| GATAATAGGCAAGGCCAGAA+GGG | 0.576847 | 3_1:-86399384 | None:intergenic |
| GCAGATGGCTGGCACATGTG+GGG | 0.581179 | 3_1:+86401337 | Msa0383470:intron |
| GACCTGCTTCTGTAGTTCAC+CGG | 0.583896 | 3_1:-86396012 | None:intergenic |
| TGGGTGTTTCCACTTCGAGC+GGG | 0.584384 | 3_1:-86399605 | None:intergenic |
| GCTTAGCTTTACGACGAGTG+TGG | 0.588964 | 3_1:-86399628 | None:intergenic |
| AATTCCAAGATCCAATTCCT+CGG | 0.589768 | 3_1:+86395379 | Msa0383470:CDS |
| AAAATGGGCTGAACCTCACG+TGG | 0.592865 | 3_1:+86397851 | Msa0383470:CDS |
| ACTTGCTCCCCACTTGAACA+AGG | 0.596960 | 3_1:+86398234 | Msa0383470:CDS |
| AGCCTTTCCAACCTGCTCCT+CGG | 0.598082 | 3_1:-86395979 | None:intergenic |
| TGAGATATCACTTCCAACAG+AGG | 0.601782 | 3_1:-86397649 | None:intergenic |
| AGCTATTAAGATAATAGGCA+AGG | 0.602545 | 3_1:-86399393 | None:intergenic |
| TCTGAAGCCCTACACAAAGA+AGG | 0.603321 | 3_1:+86398440 | Msa0383470:CDS |
| ACTTGTATATTCTCAACATG+AGG | 0.604598 | 3_1:-86398414 | None:intergenic |
| GCAAGTAAACCCGCTCGAAG+TGG | 0.604975 | 3_1:+86399596 | Msa0383470:CDS |
| GCTACATATTTATTTGAACG+TGG | 0.607894 | 3_1:+86401359 | Msa0383470:three_prime_UTR |
| TGAAGTTTACAAGTCCTCAA+AGG | 0.607940 | 3_1:+86398207 | Msa0383470:CDS |
| GCGAAGACGAAAAGCTTCGT+AGG | 0.608949 | 3_1:-86395256 | None:intergenic |
| GAAGGAGAAAATTAGGGCAA+CGG | 0.609746 | 3_1:-86395284 | None:intergenic |
| TTGGATGCCGAGGAGCAGGT+TGG | 0.613773 | 3_1:+86395972 | Msa0383470:CDS |
| AGAGGAATCAGAATCTTCGA+TGG | 0.619773 | 3_1:-86395329 | None:intergenic |
| AAAAGGGTCATTGGATGCCG+AGG | 0.621224 | 3_1:+86395962 | Msa0383470:CDS |
| TGATTTGAACTCAAAACTAG+AGG | 0.624974 | 3_1:+86396199 | Msa0383470:CDS |
| AAACAGTGAGAAAGTGAACT+GGG | 0.625922 | 3_1:+86396142 | Msa0383470:CDS |
| AATGTTGAAGGCAAAGCTAG+AGG | 0.629492 | 3_1:+86397086 | Msa0383470:CDS |
| GTGGGTGTTTCCACTTCGAG+CGG | 0.630465 | 3_1:-86399606 | None:intergenic |
| TTCGATGGAAACATCGACCT+CGG | 0.634140 | 3_1:-86395314 | None:intergenic |
| CATTGATCAGGTCGCTACTG+CGG | 0.635282 | 3_1:+86398386 | Msa0383470:CDS |
| TAATTGGATCTTAAGAGCAG+AGG | 0.640351 | 3_1:-86395347 | None:intergenic |
| AGAAGCAACCTCATTCTGCA+AGG | 0.645724 | 3_1:-86395766 | None:intergenic |
| TAAAGTGAGATCTAAACATG+TGG | 0.647367 | 3_1:-86394813 | None:intergenic |
| TCATGTTGAGAATATACAAG+TGG | 0.650587 | 3_1:+86398416 | Msa0383470:CDS |
| ATCGACCTCGGAAGTAACGA+AGG | 0.651869 | 3_1:-86395302 | None:intergenic |
| ACGTGCTCTTAAAGTTGCCG+AGG | 0.655385 | 3_1:+86396958 | Msa0383470:CDS |
| ATTCCAATGACTCTCAGCCA+CGG | 0.657274 | 3_1:-86397614 | None:intergenic |
| ATATAGTGTACAGCAAGCCA+AGG | 0.657714 | 3_1:-86397496 | None:intergenic |
| GGTGTTAATGATCAGACTCA+TGG | 0.658662 | 3_1:+86397460 | Msa0383470:intron |
| TAGTGTACAGCAAGCCAAGG+AGG | 0.659126 | 3_1:-86397493 | None:intergenic |
| AGAGTCATTGGAATGAACAT+GGG | 0.671207 | 3_1:+86397623 | Msa0383470:CDS |
| GTGGTCTGTGGTGAAAACAA+AGG | 0.688492 | 3_1:+86398147 | Msa0383470:CDS |
| CAAAGCAAAAGAGCTGAGCG+AGG | 0.693194 | 3_1:+86397116 | Msa0383470:CDS |
| TGTGAAAGAACAGTGGTCTG+TGG | 0.702105 | 3_1:+86398135 | Msa0383470:CDS |
| TTCCAGCTGTGAAAGAACAG+TGG | 0.708355 | 3_1:+86398128 | Msa0383470:CDS |
| ACTCGTCGTAAAGCTAAGCG+AGG | 0.711196 | 3_1:+86399632 | Msa0383470:CDS |
| AACCTGGCGATGATATGCAG+TGG | 0.744590 | 3_1:-86398496 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTATATTTTTTTTTTTTTG+AGG | + | chr3_1:86394850-86394869 | Msa0383470:five_prime_UTR | 10.0% |
| !!! | CTATATTTTTTTTTTTTTGA+GGG | + | chr3_1:86394851-86394870 | Msa0383470:five_prime_UTR | 10.0% |
| !!! | TATATTTTTTTTTTTTTGAG+GGG | + | chr3_1:86394852-86394871 | Msa0383470:five_prime_UTR | 10.0% |
| !!! | GAAAAAATAATAATTTTGAA+GGG | - | chr3_1:86395935-86395954 | None:intergenic | 10.0% |
| !! | ATTAAAAAAGGAACATATAA+AGG | - | chr3_1:86394962-86394981 | None:intergenic | 15.0% |
| !!! | GGAAAAAATAATAATTTTGA+AGG | - | chr3_1:86395936-86395955 | None:intergenic | 15.0% |
| !!! | CTTAATTTTTTTTCATTAAG+TGG | - | chr3_1:86396773-86396792 | None:intergenic | 15.0% |
| !!! | TATCAAAACATAATTTTGTT+AGG | + | chr3_1:86396856-86396875 | Msa0383470:intron | 15.0% |
| !!! | TTCTATTGATATTCTTATTT+AGG | + | chr3_1:86397059-86397078 | Msa0383470:intron | 15.0% |
| !!! | ATATAAGGAATTTTTTTACT+AGG | - | chr3_1:86397337-86397356 | None:intergenic | 15.0% |
| !!! | TTATTTTATAGTAAACTATC+AGG | - | chr3_1:86397387-86397406 | None:intergenic | 15.0% |
| !!! | GTACTATATGATATTTATTT+TGG | + | chr3_1:86397676-86397695 | Msa0383470:intron | 15.0% |
| !! | ATTCAAAAAAATAATACAAG+AGG | - | chr3_1:86398561-86398580 | None:intergenic | 15.0% |
| !!! | TCTTGTATTATTTTTTTGAA+TGG | + | chr3_1:86398560-86398579 | Msa0383470:intron | 15.0% |
| !! | ACTAAAATATAAATATGGTT+AGG | + | chr3_1:86399319-86399338 | Msa0383470:intron | 15.0% |
| !! | AAAAAAAAACAATTCAGTAT+GGG | - | chr3_1:86399475-86399494 | None:intergenic | 15.0% |
| !!! | TGTAGATCTAATTTTTTATT+TGG | + | chr3_1:86399906-86399925 | Msa0383470:intron | 15.0% |
| !!! | GTAGATCTAATTTTTTATTT+GGG | + | chr3_1:86399907-86399926 | Msa0383470:intron | 15.0% |
| !!! | TAGATCTAATTTTTTATTTG+GGG | + | chr3_1:86399908-86399927 | Msa0383470:intron | 15.0% |
| !! | TCATTAATAAGTTTATAGTT+TGG | + | chr3_1:86401052-86401071 | Msa0383470:intron | 15.0% |
| !! | CATTAATAAGTTTATAGTTT+GGG | + | chr3_1:86401053-86401072 | Msa0383470:intron | 15.0% |
| !!! | TTAATGGAATATTTCTATTT+TGG | + | chr3_1:86401193-86401212 | Msa0383470:intron | 15.0% |
| !!! | TAATGGAATATTTCTATTTT+GGG | + | chr3_1:86401194-86401213 | Msa0383470:intron | 15.0% |
| !! | TTCAAATCATCTAAAAAGAA+AGG | + | chr3_1:86395087-86395106 | Msa0383470:five_prime_UTR | 20.0% |
| !!! | AATTATGATAACTGAGATTT+TGG | - | chr3_1:86395412-86395431 | None:intergenic | 20.0% |
| !! | AAGAAGTTCATAAAAAAACT+TGG | - | chr3_1:86395500-86395519 | None:intergenic | 20.0% |
| !! | AAATGCTTCAAAAATAATAC+AGG | - | chr3_1:86395857-86395876 | None:intergenic | 20.0% |
| !!! | GTATTATTTTTGAAGCATTT+TGG | + | chr3_1:86395857-86395876 | Msa0383470:intron | 20.0% |
| !!! | TTATTTTTTCCTCAGAAAAA+AGG | + | chr3_1:86395945-86395964 | Msa0383470:intron | 20.0% |
| !!! | TATTTTTTCCTCAGAAAAAA+GGG | + | chr3_1:86395946-86395965 | Msa0383470:intron | 20.0% |
| !!! | TTTTTTTTCATTAAGTGGTT+AGG | - | chr3_1:86396768-86396787 | None:intergenic | 20.0% |
| !! | AATAAACTGACATTATTAGA+TGG | - | chr3_1:86396837-86396856 | None:intergenic | 20.0% |
| !! | TAAAAAGATTACATGGTTTA+GGG | - | chr3_1:86397162-86397181 | None:intergenic | 20.0% |
| !! | TTAAAAAGATTACATGGTTT+AGG | - | chr3_1:86397163-86397182 | None:intergenic | 20.0% |
| !! | CAACATTTAAAAAGATTACA+TGG | - | chr3_1:86397169-86397188 | None:intergenic | 20.0% |
| !!! | ATAATCATGGATAACTTTTA+AGG | - | chr3_1:86397207-86397226 | None:intergenic | 20.0% |
| !! | TTCATCTATATACAAGAAAA+TGG | - | chr3_1:86397281-86397300 | None:intergenic | 20.0% |
| !! | TTCCTTATATTATGTGATAT+TGG | + | chr3_1:86397347-86397366 | Msa0383470:intron | 20.0% |
| !! | TACCAATATCACATAATATA+AGG | - | chr3_1:86397352-86397371 | None:intergenic | 20.0% |
| !!! | TATTATGTGATATTGGTAAT+TGG | + | chr3_1:86397354-86397373 | Msa0383470:intron | 20.0% |
| !! | ATAAAATAAACTATCAGACA+AGG | + | chr3_1:86397398-86397417 | Msa0383470:intron | 20.0% |
| !!! | TTTTATTAATTGATGCTTAC+TGG | + | chr3_1:86397439-86397458 | Msa0383470:intron | 20.0% |
| !! | ATTATTAGATGATGTGAATA+AGG | - | chr3_1:86397573-86397592 | None:intergenic | 20.0% |
| !! | AGATAAATATGATAGACTTA+CGG | - | chr3_1:86397889-86397908 | None:intergenic | 20.0% |
| !! | AGCAGAAATATATAAATAGT+AGG | - | chr3_1:86398535-86398554 | None:intergenic | 20.0% |
| !!! | AGATTCTATTTTCAATTATC+TGG | - | chr3_1:86398812-86398831 | None:intergenic | 20.0% |
| !! | AAAATATAAATATGGTTAGG+TGG | + | chr3_1:86399322-86399341 | Msa0383470:intron | 20.0% |
| !! | ATATCAAATTGAAATTATGC+AGG | + | chr3_1:86399355-86399374 | Msa0383470:intron | 20.0% |
| !! | GAAAAAAAAACAATTCAGTA+TGG | - | chr3_1:86399476-86399495 | None:intergenic | 20.0% |
| !! | CTTGCAAAATAAAAAATTCA+AGG | - | chr3_1:86399853-86399872 | None:intergenic | 20.0% |
| !! | AATATACTCTTCTAATCAAA+TGG | - | chr3_1:86400463-86400482 | None:intergenic | 20.0% |
| !!! | TTGATTAGAAGAGTATATTT+AGG | + | chr3_1:86400464-86400483 | Msa0383470:intron | 20.0% |
| !!! | AATATTTTTCTCAAACGTTT+TGG | - | chr3_1:86400491-86400510 | None:intergenic | 20.0% |
| !!! | TAATTTTGTTTCCTTTTTCA+AGG | - | chr3_1:86400589-86400608 | None:intergenic | 20.0% |
| !!! | AATAAATAAGGGTATAATAG+TGG | - | chr3_1:86400858-86400877 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | - | chr3_1:86400869-86400888 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | - | chr3_1:86400870-86400889 | None:intergenic | 20.0% |
| !!! | ATTAATTGTGTTGATTTCAA+TGG | - | chr3_1:86400953-86400972 | None:intergenic | 20.0% |
| !! | TAGAAAGCTAAAAACTATAA+GGG | - | chr3_1:86401259-86401278 | None:intergenic | 20.0% |
| !! | ATAGAAAGCTAAAAACTATA+AGG | - | chr3_1:86401260-86401279 | None:intergenic | 20.0% |
| !!! | GTTATATTTGTTATTAAACC+TGG | + | chr3_1:86401481-86401500 | Msa0383470:three_prime_UTR | 20.0% |
| !! | AATAAACATATACTTGAAAG+TGG | - | chr3_1:86401565-86401584 | None:intergenic | 20.0% |
| !! | AGAATAAACCAAATGAAAAA+GGG | - | chr3_1:86401680-86401699 | None:intergenic | 20.0% |
| !! | AAGAATAAACCAAATGAAAA+AGG | - | chr3_1:86401681-86401700 | None:intergenic | 20.0% |
| ! | AAAAAAGGAACATATAAAGG+TGG | - | chr3_1:86394959-86394978 | None:intergenic | 25.0% |
| ! | TCAATTAGTTGAAATTACTG+AGG | + | chr3_1:86395555-86395574 | Msa0383470:intron | 25.0% |
| !! | AATTACTGAGGAAATTTTTG+TGG | + | chr3_1:86395567-86395586 | Msa0383470:intron | 25.0% |
| ! | GGCTAGTAATTTACAAATTT+AGG | + | chr3_1:86395588-86395607 | Msa0383470:intron | 25.0% |
| ! | AACACAAGAATTGAAGAAAA+AGG | + | chr3_1:86395686-86395705 | Msa0383470:CDS | 25.0% |
| !!! | TTAGGGATTTTTCAATCATT+AGG | + | chr3_1:86395822-86395841 | Msa0383470:intron | 25.0% |
| ! | TTTAAGCAAATAACAACAAG+TGG | - | chr3_1:86395912-86395931 | None:intergenic | 25.0% |
| !! | ATGAATCTTTTTCTCTAACT+TGG | - | chr3_1:86396180-86396199 | None:intergenic | 25.0% |
| !! | TGAAGTAAATCTGAGTTTTA+TGG | + | chr3_1:86396263-86396282 | Msa0383470:intron | 25.0% |
| ! | TATTTAGGAAGAAATGTTGA+AGG | + | chr3_1:86397074-86397093 | Msa0383470:intron | 25.0% |
| ! | AAAAAGATTACATGGTTTAG+GGG | - | chr3_1:86397161-86397180 | None:intergenic | 25.0% |
| ! | TCTTGTATATAGATGAATGA+AGG | + | chr3_1:86397284-86397303 | Msa0383470:intron | 25.0% |
| ! | CTTCAATAAATTATAGATCC+AGG | + | chr3_1:86397726-86397745 | Msa0383470:intron | 25.0% |
| !! | CTTTCATACTTTTGATCTTT+AGG | + | chr3_1:86397907-86397926 | Msa0383470:intron | 25.0% |
| !!! | TCCTAGTTTGTTAAATACTT+GGG | + | chr3_1:86398051-86398070 | Msa0383470:intron | 25.0% |
| ! | GAAACTTATACCTGATAATA+AGG | - | chr3_1:86398277-86398296 | None:intergenic | 25.0% |
| !! | GTTTGTTTATGTTTTTCTTG+AGG | + | chr3_1:86398317-86398336 | Msa0383470:intron | 25.0% |
| ! | TAAATAAAATCACACATTGC+AGG | - | chr3_1:86398755-86398774 | None:intergenic | 25.0% |
| ! | TTGAAAATAGAATCTTCAGT+TGG | + | chr3_1:86398817-86398836 | Msa0383470:intron | 25.0% |
| !! | TCTTTTCATGATATGCTTTT+TGG | + | chr3_1:86398962-86398981 | Msa0383470:intron | 25.0% |
| ! | ACTCTAGCTATTAAGATAAT+AGG | - | chr3_1:86399401-86399420 | None:intergenic | 25.0% |
| ! | CAAATACAACTAGAAATATC+AGG | - | chr3_1:86399520-86399539 | None:intergenic | 25.0% |
| ! | AAAAATATCAAAGCATGCTA+GGG | - | chr3_1:86399754-86399773 | None:intergenic | 25.0% |
| ! | AAAAAATATCAAAGCATGCT+AGG | - | chr3_1:86399755-86399774 | None:intergenic | 25.0% |
| ! | ATCGCTGAATAAAAAATTCA+AGG | - | chr3_1:86400100-86400119 | None:intergenic | 25.0% |
| ! | CTTAAATATGCATATTTGAC+CGG | + | chr3_1:86400176-86400195 | Msa0383470:intron | 25.0% |
| !! | AAAAATTCAAAGCATCTAGT+CGG | - | chr3_1:86400394-86400413 | None:intergenic | 25.0% |
| ! | TTCAAAAACATAGATTTCAG+AGG | + | chr3_1:86400420-86400439 | Msa0383470:intron | 25.0% |
| !! | TAATCAAATGGAGAAGTATA+GGG | - | chr3_1:86400451-86400470 | None:intergenic | 25.0% |
| !! | ATGGTGCTTTTATAGTTAAA+AGG | - | chr3_1:86400532-86400551 | None:intergenic | 25.0% |
| ! | TTTAAACAGAGAAGATGAAA+TGG | - | chr3_1:86400551-86400570 | None:intergenic | 25.0% |
| ! | TTCATCTTCTCTGTTTAAAT+AGG | + | chr3_1:86400552-86400571 | Msa0383470:intron | 25.0% |
| ! | TTTGTGAAAATCCTTGAAAA+AGG | + | chr3_1:86400575-86400594 | Msa0383470:intron | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr3_1:86400900-86400919 | Msa0383470:intron | 25.0% |
| ! | TCCTTATTAATTGTAGTTAG+TGG | - | chr3_1:86400904-86400923 | None:intergenic | 25.0% |
| ! | CAAATGTAGAAACTTTATGT+TGG | + | chr3_1:86401116-86401135 | Msa0383470:intron | 25.0% |
| ! | GTTGAATGCACAAATATTAA+TGG | + | chr3_1:86401177-86401196 | Msa0383470:intron | 25.0% |
| ! | CTACATATTTATTTGAACGT+GGG | + | chr3_1:86401360-86401379 | Msa0383470:three_prime_UTR | 25.0% |
| ! | TACATATTTATTTGAACGTG+GGG | + | chr3_1:86401361-86401380 | Msa0383470:three_prime_UTR | 25.0% |
| !! | TTGAATATTGCACTTCTTTT+TGG | + | chr3_1:86401385-86401404 | Msa0383470:three_prime_UTR | 25.0% |
| !! | TGAATATTGCACTTCTTTTT+GGG | + | chr3_1:86401386-86401405 | Msa0383470:three_prime_UTR | 25.0% |
| !!! | TTTTTGGGTTAGGTAAATTT+AGG | + | chr3_1:86401401-86401420 | Msa0383470:three_prime_UTR | 25.0% |
| ! | ATTCATGGTTTATTCTTTGT+TGG | + | chr3_1:86401641-86401660 | Msa0383470:three_prime_UTR | 25.0% |
| !! | TATCATTACACAATTTTCAG+AGG | - | chr3_1:86401731-86401750 | None:intergenic | 25.0% |
| ! | ATGATACTGTTTAGTTAACT+TGG | + | chr3_1:86401745-86401764 | Msa0383470:three_prime_UTR | 25.0% |
| ! | TAACGTCATGAAATTGAAAA+TGG | - | chr3_1:86401798-86401817 | None:intergenic | 25.0% |
| TAAAGTGAGATCTAAACATG+TGG | - | chr3_1:86394816-86394835 | None:intergenic | 30.0% | |
| !!! | TTTTGTAAAAAAGAGTGTCG+TGG | - | chr3_1:86394917-86394936 | None:intergenic | 30.0% |
| AGTAACGAAGGAGAAAATTA+GGG | - | chr3_1:86395293-86395312 | None:intergenic | 30.0% | |
| AAGTAACGAAGGAGAAAATT+AGG | - | chr3_1:86395294-86395313 | None:intergenic | 30.0% | |
| !! | TGGAATTGAGTTGATCTAAT+TGG | - | chr3_1:86395366-86395385 | None:intergenic | 30.0% |
| ! | TTTGTGAATCGTGATTTTTG+TGG | + | chr3_1:86395621-86395640 | Msa0383470:intron | 30.0% |
| GATTGAAAAATCCCTAAAGA+GGG | - | chr3_1:86395819-86395838 | None:intergenic | 30.0% | |
| TGATTGAAAAATCCCTAAAG+AGG | - | chr3_1:86395820-86395839 | None:intergenic | 30.0% | |
| ! | TAGTCTGAAATTCTTAATGC+AGG | + | chr3_1:86396088-86396107 | Msa0383470:intron | 30.0% |
| TGATTTGAACTCAAAACTAG+AGG | + | chr3_1:86396199-86396218 | Msa0383470:CDS | 30.0% | |
| CAGATAAAAAAAGTTAGCAG+AGG | - | chr3_1:86396617-86396636 | None:intergenic | 30.0% | |
| ! | AACTTTCACATTGCCTATTT+TGG | + | chr3_1:86396669-86396688 | Msa0383470:intron | 30.0% |
| ! | ACTTTCACATTGCCTATTTT+GGG | + | chr3_1:86396670-86396689 | Msa0383470:intron | 30.0% |
| ! | TCATTTATCTTTTGAACCTG+TGG | - | chr3_1:86396908-86396927 | None:intergenic | 30.0% |
| ACAGGTTCAAAAGATAAATG+AGG | + | chr3_1:86396907-86396926 | Msa0383470:intron | 30.0% | |
| TGAGCGAGGTAATAATTTAT+TGG | + | chr3_1:86397130-86397149 | Msa0383470:intron | 30.0% | |
| !!! | TAACTTTTAAGGTTTTCTGG+TGG | - | chr3_1:86397196-86397215 | None:intergenic | 30.0% |
| !!! | GGATAACTTTTAAGGTTTTC+TGG | - | chr3_1:86397199-86397218 | None:intergenic | 30.0% |
| TGTACACTATATTCGTAGTA+AGG | + | chr3_1:86397507-86397526 | Msa0383470:CDS | 30.0% | |
| !! | TTTTCTTTTTTGTTAGTCCG+TGG | + | chr3_1:86397597-86397616 | Msa0383470:intron | 30.0% |
| AGAAGAAGAAGAATTAAACC+TGG | - | chr3_1:86397747-86397766 | None:intergenic | 30.0% | |
| !! | CTCCTAGTTTGTTAAATACT+TGG | + | chr3_1:86398050-86398069 | Msa0383470:intron | 30.0% |
| CATTTCTTCAGTTGAAAACA+GGG | - | chr3_1:86398106-86398125 | None:intergenic | 30.0% | |
| ! | CTGTTTTCAACTGAAGAAAT+GGG | + | chr3_1:86398105-86398124 | Msa0383470:intron | 30.0% |
| ATGTGTAGATCCTTATTATC+AGG | + | chr3_1:86398264-86398283 | Msa0383470:CDS | 30.0% | |
| AGTTTCTTCATTGAACTGTA+TGG | + | chr3_1:86398291-86398310 | Msa0383470:intron | 30.0% | |
| ACTTGTATATTCTCAACATG+AGG | - | chr3_1:86398417-86398436 | None:intergenic | 30.0% | |
| TCATGTTGAGAATATACAAG+TGG | + | chr3_1:86398416-86398435 | Msa0383470:CDS | 30.0% | |
| !!! | AGTTTTTTTTCTCCTTCATC+CGG | + | chr3_1:86398610-86398629 | Msa0383470:intron | 30.0% |
| ACAACAACAACAAATACAAG+AGG | - | chr3_1:86398706-86398725 | None:intergenic | 30.0% | |
| TTGACTAGATTTCAGATTGT+GGG | - | chr3_1:86398879-86398898 | None:intergenic | 30.0% | |
| TTTGACTAGATTTCAGATTG+TGG | - | chr3_1:86398880-86398899 | None:intergenic | 30.0% | |
| GTGATGTCATAATATCAAGT+TGG | - | chr3_1:86398904-86398923 | None:intergenic | 30.0% | |
| ATTGCAACATGATATAGACA+TGG | + | chr3_1:86398987-86399006 | Msa0383470:intron | 30.0% | |
| CACAAAATGATAAGCAGAAA+GGG | - | chr3_1:86399019-86399038 | None:intergenic | 30.0% | |
| TCACAAAATGATAAGCAGAA+AGG | - | chr3_1:86399020-86399039 | None:intergenic | 30.0% | |
| ! | TTCTGCTTATCATTTTGTGA+TGG | + | chr3_1:86399020-86399039 | Msa0383470:intron | 30.0% |
| ! | TCTGCTTATCATTTTGTGAT+GGG | + | chr3_1:86399021-86399040 | Msa0383470:intron | 30.0% |
| TTTCAAAGAATAAGCAGTGA+GGG | - | chr3_1:86399076-86399095 | None:intergenic | 30.0% | |
| ATTTCAAAGAATAAGCAGTG+AGG | - | chr3_1:86399077-86399096 | None:intergenic | 30.0% | |
| TATTAGTTCCAGATCTTGAA+CGG | + | chr3_1:86399100-86399119 | Msa0383470:intron | 30.0% | |
| AGACAATTCAACACTCAAAA+AGG | - | chr3_1:86399167-86399186 | None:intergenic | 30.0% | |
| GAATTGTCTTTCGTTATTCA+AGG | + | chr3_1:86399178-86399197 | Msa0383470:intron | 30.0% | |
| TTGCTACTAAAGAATTGGAA+TGG | + | chr3_1:86399252-86399271 | Msa0383470:CDS | 30.0% | |
| TAAAGAATTGGAATGGTTTG+CGG | + | chr3_1:86399259-86399278 | Msa0383470:CDS | 30.0% | |
| AGCTATTAAGATAATAGGCA+AGG | - | chr3_1:86399396-86399415 | None:intergenic | 30.0% | |
| ! | ATCTAAGACTAACCAGAAAA+TGG | - | chr3_1:86399432-86399451 | None:intergenic | 30.0% |
| ACAAGTAGATAACATGAAGT+TGG | + | chr3_1:86399663-86399682 | Msa0383470:exon | 30.0% | |
| !!! | TTTTTTTCGGAGAGAAGTTT+AGG | + | chr3_1:86399697-86399716 | Msa0383470:three_prime_UTR | 30.0% |
| CATGTCAATAACATAGCTTA+TGG | - | chr3_1:86399780-86399799 | None:intergenic | 30.0% | |
| ! | TTATTTGGGGAAAACTGTTT+TGG | + | chr3_1:86399921-86399940 | Msa0383470:intron | 30.0% |
| ! | TATTTGGGGAAAACTGTTTT+GGG | + | chr3_1:86399922-86399941 | Msa0383470:intron | 30.0% |
| ! | TGCATATTTAAGATCACACA+AGG | - | chr3_1:86400168-86400187 | None:intergenic | 30.0% |
| CTTAAAAACTTGTGAAAACC+AGG | + | chr3_1:86400307-86400326 | Msa0383470:intron | 30.0% | |
| ! | CTAATCAAATGGAGAAGTAT+AGG | - | chr3_1:86400452-86400471 | None:intergenic | 30.0% |
| AAGTGACAATTATTGTGAGA+CGG | - | chr3_1:86400767-86400786 | None:intergenic | 30.0% | |
| AGGTTTGTACACGATTATTA+AGG | - | chr3_1:86400981-86401000 | None:intergenic | 30.0% | |
| CTCACAATATTAGTCGTTTA+AGG | - | chr3_1:86401001-86401020 | None:intergenic | 30.0% | |
| AAACGACTAATATTGTGAGA+CGG | + | chr3_1:86401002-86401021 | Msa0383470:intron | 30.0% | |
| GCTACATATTTATTTGAACG+TGG | + | chr3_1:86401359-86401378 | Msa0383470:three_prime_UTR | 30.0% | |
| AAACTTATAGTACAGACAAC+CGG | - | chr3_1:86401606-86401625 | None:intergenic | 30.0% | |
| !! | CATGTTTTCCCTTTTTCATT+TGG | + | chr3_1:86401669-86401688 | Msa0383470:three_prime_UTR | 30.0% |
| ! | TTAGTTAACTTGGTGATTTG+TGG | + | chr3_1:86401755-86401774 | Msa0383470:three_prime_UTR | 30.0% |
| AAAGGAACATATAAAGGTGG+TGG | - | chr3_1:86394956-86394975 | None:intergenic | 35.0% | |
| AATCTTGATACCAAACCCTT+TGG | + | chr3_1:86395127-86395146 | Msa0383470:five_prime_UTR | 35.0% | |
| TAATTGGATCTTAAGAGCAG+AGG | - | chr3_1:86395350-86395369 | None:intergenic | 35.0% | |
| AATTCCAAGATCCAATTCCT+CGG | + | chr3_1:86395379-86395398 | Msa0383470:CDS | 35.0% | |
| TTCCTAAATCGATGTTACTG+TGG | + | chr3_1:86395521-86395540 | Msa0383470:intron | 35.0% | |
| GAATGCTACTCAACTTATCT+TGG | - | chr3_1:86395743-86395762 | None:intergenic | 35.0% | |
| ! | TTTTCACTAGACCCTCTTTA+GGG | + | chr3_1:86395805-86395824 | Msa0383470:intron | 35.0% |
| AAAACAGTGAGAAAGTGAAC+TGG | + | chr3_1:86396141-86396160 | Msa0383470:CDS | 35.0% | |
| AAACAGTGAGAAAGTGAACT+GGG | + | chr3_1:86396142-86396161 | Msa0383470:CDS | 35.0% | |
| GACACGTTAATAAAGCAATG+AGG | - | chr3_1:86396501-86396520 | None:intergenic | 35.0% | |
| ATAGGCAATGTGAAAGTTGT+GGG | - | chr3_1:86396667-86396686 | None:intergenic | 35.0% | |
| AATAGGCAATGTGAAAGTTG+TGG | - | chr3_1:86396668-86396687 | None:intergenic | 35.0% | |
| AATCATTACACCTGCACATT+TGG | - | chr3_1:86396730-86396749 | None:intergenic | 35.0% | |
| ! | TTTTCTTGCCAATGTTGTGT+AGG | + | chr3_1:86397005-86397024 | Msa0383470:intron | 35.0% |
| CACACTGTTGCTAATAATCA+TGG | - | chr3_1:86397220-86397239 | None:intergenic | 35.0% | |
| CATGATTATTAGCAACAGTG+TGG | + | chr3_1:86397218-86397237 | Msa0383470:intron | 35.0% | |
| AGAGTCATTGGAATGAACAT+GGG | + | chr3_1:86397623-86397642 | Msa0383470:CDS | 35.0% | |
| GTTGGAAGTGATATCTCAAA+AGG | + | chr3_1:86397654-86397673 | Msa0383470:CDS | 35.0% | |
| CGGGTAAAACAAACAAATTG+TGG | - | chr3_1:86397980-86397999 | None:intergenic | 35.0% | |
| !!! | CAATTTGTTTGTTTTACCCG+TGG | + | chr3_1:86397980-86397999 | Msa0383470:intron | 35.0% |
| TAAATGGTCAACAAGCTATC+AGG | - | chr3_1:86398007-86398026 | None:intergenic | 35.0% | |
| !! | TGATAGCTTGTTGACCATTT+AGG | + | chr3_1:86398006-86398025 | Msa0383470:intron | 35.0% |
| CCAATGTTGAAACTCCTAAA+TGG | - | chr3_1:86398023-86398042 | None:intergenic | 35.0% | |
| CCATTTAGGAGTTTCAACAT+TGG | + | chr3_1:86398020-86398039 | Msa0383470:intron | 35.0% | |
| GCCCAAGTATTTAACAAACT+AGG | - | chr3_1:86398055-86398074 | None:intergenic | 35.0% | |
| CCATTTCTTCAGTTGAAAAC+AGG | - | chr3_1:86398107-86398126 | None:intergenic | 35.0% | |
| ! | CCTGTTTTCAACTGAAGAAA+TGG | + | chr3_1:86398104-86398123 | Msa0383470:intron | 35.0% |
| TGAAGTTTACAAGTCCTCAA+AGG | + | chr3_1:86398207-86398226 | Msa0383470:CDS | 35.0% | |
| !! | TTCTTTTGCCTTGTTCAAGT+GGG | - | chr3_1:86398245-86398264 | None:intergenic | 35.0% |
| !! | ATTCTTTTGCCTTGTTCAAG+TGG | - | chr3_1:86398246-86398265 | None:intergenic | 35.0% |
| ! | TTTCTTGAGGTATTCTCAAC+CGG | + | chr3_1:86398330-86398349 | Msa0383470:intron | 35.0% |
| AGAACAACCTTCTTTGTGTA+GGG | - | chr3_1:86398450-86398469 | None:intergenic | 35.0% | |
| !!! | GTTTTTTTTCTCCTTCATCC+GGG | + | chr3_1:86398611-86398630 | Msa0383470:intron | 35.0% |
| ACAACAAATACAAGAGGATC+AGG | - | chr3_1:86398700-86398719 | None:intergenic | 35.0% | |
| ACGATGAGGAAACATTAGTA+TGG | - | chr3_1:86398926-86398945 | None:intergenic | 35.0% | |
| TACTAATGTTTCCTCATCGT+AGG | + | chr3_1:86398926-86398945 | Msa0383470:intron | 35.0% | |
| ACTAATGTTTCCTCATCGTA+GGG | + | chr3_1:86398927-86398946 | Msa0383470:intron | 35.0% | |
| AAAACAAACCGTTCAAGATC+TGG | - | chr3_1:86399111-86399130 | None:intergenic | 35.0% | |
| ACCTCTTGCTACTAAAGAAT+TGG | + | chr3_1:86399247-86399266 | Msa0383470:CDS | 35.0% | |
| TCCAATTCTTTAGTAGCAAG+AGG | - | chr3_1:86399251-86399270 | None:intergenic | 35.0% | |
| !!! | GAGTTTTTTCTGCCATTTTC+TGG | + | chr3_1:86399417-86399436 | Msa0383470:CDS | 35.0% |
| GAGTAAGTGCATATATGGAA+AGG | - | chr3_1:86399498-86399517 | None:intergenic | 35.0% | |
| ATCAGGAGTAAGTGCATATA+TGG | - | chr3_1:86399503-86399522 | None:intergenic | 35.0% | |
| CTTCATGTTATCTACTTGTC+TGG | - | chr3_1:86399662-86399681 | None:intergenic | 35.0% | |
| !!! | GGCTCCTGGTTTATTTTTTT+CGG | + | chr3_1:86399684-86399703 | Msa0383470:three_prime_UTR | 35.0% |
| CTCTCCGAAAAAAATAAACC+AGG | - | chr3_1:86399691-86399710 | None:intergenic | 35.0% | |
| ! | TGCACATTTAAGATCACACA+AGG | - | chr3_1:86399972-86399991 | None:intergenic | 35.0% |
| GAGACATGTTTCGTAAAAGT+CGG | - | chr3_1:86399998-86400017 | None:intergenic | 35.0% | |
| GTAATGCATAAGCTTATGTC+TGG | + | chr3_1:86400033-86400052 | Msa0383470:intron | 35.0% | |
| CATAAGCTTATGTCTGGTAT+GGG | + | chr3_1:86400039-86400058 | Msa0383470:intron | 35.0% | |
| AAATATGCATATTTGACCGG+TGG | + | chr3_1:86400179-86400198 | Msa0383470:intron | 35.0% | |
| ! | AATGTGAGAACTGAGAGTAT+TGG | + | chr3_1:86400662-86400681 | Msa0383470:intron | 35.0% |
| ! | GGAGTTTGGACATTGAATTT+TGG | + | chr3_1:86400683-86400702 | Msa0383470:intron | 35.0% |
| AGTTAGTGGAGTAGTTAAGT+TGG | - | chr3_1:86400890-86400909 | None:intergenic | 35.0% | |
| !!! | ATTGCACTTCTTTTTGGGTT+AGG | + | chr3_1:86401391-86401410 | Msa0383470:three_prime_UTR | 35.0% |
| GTTTGGGTGTTCATGTATTA+TGG | + | chr3_1:86401456-86401475 | Msa0383470:three_prime_UTR | 35.0% | |
| AACATAAAAGAGTGAGTACC+AGG | - | chr3_1:86401502-86401521 | None:intergenic | 35.0% | |
| ! | ATCACACAGAAACTGATTCA+TGG | + | chr3_1:86401626-86401645 | Msa0383470:three_prime_UTR | 35.0% |
| !! | CATATAAAGGTGGTGGATGT+AGG | - | chr3_1:86394949-86394968 | None:intergenic | 40.0% |
| TGCTCAAAAACCAAAGGGTT+TGG | - | chr3_1:86395140-86395159 | None:intergenic | 40.0% | |
| TGCACTGCTCAAAAACCAAA+GGG | - | chr3_1:86395145-86395164 | None:intergenic | 40.0% | |
| TTGCACTGCTCAAAAACCAA+AGG | - | chr3_1:86395146-86395165 | None:intergenic | 40.0% | |
| !! | TTGGTTTTTGAGCAGTGCAA+TGG | + | chr3_1:86395146-86395165 | Msa0383470:five_prime_UTR | 40.0% |
| !! | TTTTCCGAACGAAGCTTTGT+TGG | + | chr3_1:86395219-86395238 | Msa0383470:five_prime_UTR | 40.0% |
| GAAGGAGAAAATTAGGGCAA+CGG | - | chr3_1:86395287-86395306 | None:intergenic | 40.0% | |
| AGAGGAATCAGAATCTTCGA+TGG | - | chr3_1:86395332-86395351 | None:intergenic | 40.0% | |
| TTGGATTGATACCGAGGAAT+TGG | - | chr3_1:86395393-86395412 | None:intergenic | 40.0% | |
| ! | GAGATTTTGGATTGATACCG+AGG | - | chr3_1:86395399-86395418 | None:intergenic | 40.0% |
| !! | CACCACAGTAACATCGATTT+AGG | - | chr3_1:86395526-86395545 | None:intergenic | 40.0% |
| CATTCAATCCTTGCAGAATG+AGG | + | chr3_1:86395758-86395777 | Msa0383470:CDS | 40.0% | |
| ! | CTTTTCACTAGACCCTCTTT+AGG | + | chr3_1:86395804-86395823 | Msa0383470:intron | 40.0% |
| TCCTCAGAAAAAAGGGTCAT+TGG | + | chr3_1:86395953-86395972 | Msa0383470:intron | 40.0% | |
| !!! | TCCAATGACCCTTTTTTCTG+AGG | - | chr3_1:86395957-86395976 | None:intergenic | 40.0% |
| AGAAAGTGAACTGGGAATCT+CGG | + | chr3_1:86396150-86396169 | Msa0383470:CDS | 40.0% | |
| GAGGATGTAAGTTGTACACT+TGG | + | chr3_1:86396218-86396237 | Msa0383470:intron | 40.0% | |
| ACACGCACACAAACAAGAAT+AGG | - | chr3_1:86396295-86396314 | None:intergenic | 40.0% | |
| ! | TTTCTTTTCCCCTCTTGTCT+TGG | + | chr3_1:86396525-86396544 | Msa0383470:intron | 40.0% |
| ! | AAGTTGTGGGAGTGTAGTAA+AGG | - | chr3_1:86396654-86396673 | None:intergenic | 40.0% |
| TTGAGTAGTGTATTCTCCAC+AGG | + | chr3_1:86396889-86396908 | Msa0383470:intron | 40.0% | |
| !! | TAAGAGCACGTTCAGTTTTG+CGG | - | chr3_1:86396949-86396968 | None:intergenic | 40.0% |
| AATGTTGAAGGCAAAGCTAG+AGG | + | chr3_1:86397086-86397105 | Msa0383470:CDS | 40.0% | |
| CTATCAGACAAGGTGTATTG+TGG | + | chr3_1:86397408-86397427 | Msa0383470:intron | 40.0% | |
| GGTGTTAATGATCAGACTCA+TGG | + | chr3_1:86397460-86397479 | Msa0383470:intron | 40.0% | |
| ATATAGTGTACAGCAAGCCA+AGG | - | chr3_1:86397499-86397518 | None:intergenic | 40.0% | |
| GAGAGTCATTGGAATGAACA+TGG | + | chr3_1:86397622-86397641 | Msa0383470:CDS | 40.0% | |
| TGAGATATCACTTCCAACAG+AGG | - | chr3_1:86397652-86397671 | None:intergenic | 40.0% | |
| ! | ACGCTTTTCCTATGCATTCT+AGG | + | chr3_1:86397803-86397822 | Msa0383470:intron | 40.0% |
| ATTCTAGGCCCTAGAGAAAA+AGG | + | chr3_1:86397818-86397837 | Msa0383470:intron | 40.0% | |
| ! | AGCTTGTGCCTTTTTCTCTA+GGG | - | chr3_1:86397829-86397848 | None:intergenic | 40.0% |
| ! | AAAAGGCACAAGCTGGAAAA+TGG | + | chr3_1:86397835-86397854 | Msa0383470:CDS | 40.0% |
| ! | AAAGGCACAAGCTGGAAAAT+GGG | + | chr3_1:86397836-86397855 | Msa0383470:CDS | 40.0% |
| !! | GTTTTAATCGTTTCCACGTG+AGG | - | chr3_1:86397867-86397886 | None:intergenic | 40.0% |
| AAATCCACCATCTAACCACA+GGG | - | chr3_1:86397950-86397969 | None:intergenic | 40.0% | |
| !! | TCTTTTGCCTTGTTCAAGTG+GGG | - | chr3_1:86398244-86398263 | None:intergenic | 40.0% |
| TAGCAAGCCATACATTGATC+AGG | + | chr3_1:86398374-86398393 | Msa0383470:CDS | 40.0% | |
| GAGAACAACCTTCTTTGTGT+AGG | - | chr3_1:86398451-86398470 | None:intergenic | 40.0% | |
| AAGAAGGTTGTTCTCGCTTA+TGG | + | chr3_1:86398456-86398475 | Msa0383470:CDS | 40.0% | |
| AGAAGGTTGTTCTCGCTTAT+GGG | + | chr3_1:86398457-86398476 | Msa0383470:CDS | 40.0% | |
| TCTCGCTTATGGGAATTTCT+TGG | + | chr3_1:86398467-86398486 | Msa0383470:CDS | 40.0% | |
| AGGAAAGTAAAGTCTGAACC+TGG | - | chr3_1:86398515-86398534 | None:intergenic | 40.0% | |
| AAATACAAGAGGATCAGGAG+GGG | - | chr3_1:86398695-86398714 | None:intergenic | 40.0% | |
| CAAATACAAGAGGATCAGGA+GGG | - | chr3_1:86398696-86398715 | None:intergenic | 40.0% | |
| ACAAATACAAGAGGATCAGG+AGG | - | chr3_1:86398697-86398716 | None:intergenic | 40.0% | |
| CTAATGTTTCCTCATCGTAG+GGG | + | chr3_1:86398928-86398947 | Msa0383470:intron | 40.0% | |
| TAATGTTTCCTCATCGTAGG+GGG | + | chr3_1:86398929-86398948 | Msa0383470:intron | 40.0% | |
| ! | GAATGGTTTGCGGTATGTAT+TGG | + | chr3_1:86399269-86399288 | Msa0383470:intron | 40.0% |
| TATCATCTGCAGCAGCAAAA+AGG | + | chr3_1:86399574-86399593 | Msa0383470:intron | 40.0% | |
| ATGTTATTGACATGCGTGTC+TGG | + | chr3_1:86399786-86399805 | Msa0383470:intron | 40.0% | |
| GGTGTTCAATTGAACACCTT+TGG | + | chr3_1:86399943-86399962 | Msa0383470:intron | 40.0% | |
| GCATAAGCTTATGTCTGGTA+TGG | + | chr3_1:86400038-86400057 | Msa0383470:intron | 40.0% | |
| TTATACATCATGCACACCCT+TGG | + | chr3_1:86400139-86400158 | Msa0383470:intron | 40.0% | |
| TGTCTGAGTGAGCATCTTAT+TGG | + | chr3_1:86400211-86400230 | Msa0383470:intron | 40.0% | |
| AGTGAGCATCTTATTGGTAG+AGG | + | chr3_1:86400217-86400236 | Msa0383470:intron | 40.0% | |
| GTGAGCATCTTATTGGTAGA+GGG | + | chr3_1:86400218-86400237 | Msa0383470:intron | 40.0% | |
| CATCTTATTGGTAGAGGGAA+GGG | + | chr3_1:86400223-86400242 | Msa0383470:intron | 40.0% | |
| AGCTAAAGTGGAGGAAATTC+AGG | + | chr3_1:86400247-86400266 | Msa0383470:intron | 40.0% | |
| TGGAGACAGTTAATGATTCC+TGG | - | chr3_1:86400328-86400347 | None:intergenic | 40.0% | |
| ATCATTAACTGTCTCCACAG+TGG | + | chr3_1:86400331-86400350 | Msa0383470:intron | 40.0% | |
| TCATTAACTGTCTCCACAGT+GGG | + | chr3_1:86400332-86400351 | Msa0383470:intron | 40.0% | |
| ! | TGCGCATTTAAGATCACACA+AGG | - | chr3_1:86400368-86400387 | None:intergenic | 40.0% |
| CAATCAACTAAGAGACTGCT+CGG | - | chr3_1:86400632-86400651 | None:intergenic | 40.0% | |
| !! | GAACTGAGAGTATTGGAGTT+TGG | + | chr3_1:86400669-86400688 | Msa0383470:intron | 40.0% |
| GACAATTATTGTGAGACGGA+GGG | - | chr3_1:86400763-86400782 | None:intergenic | 40.0% | |
| TGACAATTATTGTGAGACGG+AGG | - | chr3_1:86400764-86400783 | None:intergenic | 40.0% | |
| GACTAATATTGTGAGACGGA+GGG | + | chr3_1:86401006-86401025 | Msa0383470:intron | 40.0% | |
| !! | TCATTAACTTGTGCCTTGAG+GGG | - | chr3_1:86401094-86401113 | None:intergenic | 40.0% |
| !! | CTCATTAACTTGTGCCTTGA+GGG | - | chr3_1:86401095-86401114 | None:intergenic | 40.0% |
| !! | ACTCATTAACTTGTGCCTTG+AGG | - | chr3_1:86401096-86401115 | None:intergenic | 40.0% |
| ATTGCTTAACATGTGCCCTT+AGG | + | chr3_1:86401217-86401236 | Msa0383470:intron | 40.0% | |
| TTGCTTAACATGTGCCCTTA+GGG | + | chr3_1:86401218-86401237 | Msa0383470:intron | 40.0% | |
| !! | CTTGTTAACTTGTGCCCTAA+GGG | - | chr3_1:86401235-86401254 | None:intergenic | 40.0% |
| !! | TCTTGTTAACTTGTGCCCTA+AGG | - | chr3_1:86401236-86401255 | None:intergenic | 40.0% |
| CACTTTCTGTATCTTGCAGA+TGG | + | chr3_1:86401322-86401341 | Msa0383470:intron | 40.0% | |
| TTGGGCGCACAATATTGTTT+GGG | + | chr3_1:86401440-86401459 | Msa0383470:three_prime_UTR | 40.0% | |
| ! | TAGATTTAGAGCGCCTATTC+CGG | + | chr3_1:86401584-86401603 | Msa0383470:three_prime_UTR | 40.0% |
| ATAGTACAGACAACCGGAAT+AGG | - | chr3_1:86401600-86401619 | None:intergenic | 40.0% | |
| !! | AAAAAGAGTGTCGTGGCTGA+GGG | - | chr3_1:86394910-86394929 | None:intergenic | 45.0% |
| !! | AAAAAAGAGTGTCGTGGCTG+AGG | - | chr3_1:86394911-86394930 | None:intergenic | 45.0% |
| TTTCTCCTTCGTTACTTCCG+AGG | + | chr3_1:86395297-86395316 | Msa0383470:CDS | 45.0% | |
| TTCGATGGAAACATCGACCT+CGG | - | chr3_1:86395317-86395336 | None:intergenic | 45.0% | |
| GATACCGAGGAATTGGATCT+TGG | - | chr3_1:86395386-86395405 | None:intergenic | 45.0% | |
| AGAAGCAACCTCATTCTGCA+AGG | - | chr3_1:86395769-86395788 | None:intergenic | 45.0% | |
| GAATGAGGTTGCTTCTCTTC+AGG | + | chr3_1:86395773-86395792 | Msa0383470:CDS | 45.0% | |
| GAAAGTGAACTGGGAATCTC+GGG | + | chr3_1:86396151-86396170 | Msa0383470:CDS | 45.0% | |
| AGAAACCACCAAGACAAGAG+GGG | - | chr3_1:86396536-86396555 | None:intergenic | 45.0% | |
| CAGAAACCACCAAGACAAGA+GGG | - | chr3_1:86396537-86396556 | None:intergenic | 45.0% | |
| TGGTTTCTGCTGAAAGTTGC+TGG | + | chr3_1:86396548-86396567 | Msa0383470:intron | 45.0% | |
| ! | TGTGGGAGTGTAGTAAAGGT+GGG | - | chr3_1:86396650-86396669 | None:intergenic | 45.0% |
| ! | TTGTGGGAGTGTAGTAAAGG+TGG | - | chr3_1:86396651-86396670 | None:intergenic | 45.0% |
| CCACAGCAATGACCCAAAAT+AGG | - | chr3_1:86396685-86396704 | None:intergenic | 45.0% | |
| !! | CCTATTTTGGGTCATTGCTG+TGG | + | chr3_1:86396682-86396701 | Msa0383470:intron | 45.0% |
| TCATCACTAGCCAAATGTGC+AGG | + | chr3_1:86396717-86396736 | Msa0383470:intron | 45.0% | |
| TGTGCAGGTGTAATGATTCG+TGG | + | chr3_1:86396732-86396751 | Msa0383470:intron | 45.0% | |
| TAATGATTCGTGGCCGCTAT+GGG | + | chr3_1:86396742-86396761 | Msa0383470:intron | 45.0% | |
| TTAAGTGGTTAGGCCCATAG+CGG | - | chr3_1:86396758-86396777 | None:intergenic | 45.0% | |
| ACTCACAGTCTCACATACCT+CGG | - | chr3_1:86396978-86396997 | None:intergenic | 45.0% | |
| CTTGCCAATGTTGTGTAGGA+TGG | + | chr3_1:86397009-86397028 | Msa0383470:intron | 45.0% | |
| ACCACCATCCTACACAACAT+TGG | - | chr3_1:86397016-86397035 | None:intergenic | 45.0% | |
| ATGATCAGACTCATGGTGCT+TGG | + | chr3_1:86397467-86397486 | Msa0383470:intron | 45.0% | |
| ATTCCAATGACTCTCAGCCA+CGG | - | chr3_1:86397617-86397636 | None:intergenic | 45.0% | |
| ! | CAGCTTGTGCCTTTTTCTCT+AGG | - | chr3_1:86397830-86397849 | None:intergenic | 45.0% |
| ! | CTAGAGAAAAAGGCACAAGC+TGG | + | chr3_1:86397828-86397847 | Msa0383470:CDS | 45.0% |
| CAAATCCACCATCTAACCAC+AGG | - | chr3_1:86397951-86397970 | None:intergenic | 45.0% | |
| TCAACAAGCTATCAGGACCA+CGG | - | chr3_1:86398000-86398019 | None:intergenic | 45.0% | |
| TTCCAGCTGTGAAAGAACAG+TGG | + | chr3_1:86398128-86398147 | Msa0383470:CDS | 45.0% | |
| TGTGAAAGAACAGTGGTCTG+TGG | + | chr3_1:86398135-86398154 | Msa0383470:CDS | 45.0% | |
| GTGGTCTGTGGTGAAAACAA+AGG | + | chr3_1:86398147-86398166 | Msa0383470:CDS | 45.0% | |
| GTAGCGACCTGATCAATGTA+TGG | - | chr3_1:86398384-86398403 | None:intergenic | 45.0% | |
| ! | TCTGAAGCCCTACACAAAGA+AGG | + | chr3_1:86398440-86398459 | Msa0383470:CDS | 45.0% |
| TGAGCTAAGGGATAAGGAGT+TGG | - | chr3_1:86398653-86398672 | None:intergenic | 45.0% | |
| ! | CTGGTTTGAGCTAAGGGATA+AGG | - | chr3_1:86398659-86398678 | None:intergenic | 45.0% |
| !! | GCTCAACTGGTTTGAGCTAA+GGG | - | chr3_1:86398665-86398684 | None:intergenic | 45.0% |
| !! | AGCTCAACTGGTTTGAGCTA+AGG | - | chr3_1:86398666-86398685 | None:intergenic | 45.0% |
| !!! | CGTGCTTTTTCAACGTCTCT+TGG | - | chr3_1:86399217-86399236 | None:intergenic | 45.0% |
| GATAATAGGCAAGGCCAGAA+GGG | - | chr3_1:86399387-86399406 | None:intergenic | 45.0% | |
| AGATAATAGGCAAGGCCAGA+AGG | - | chr3_1:86399388-86399407 | None:intergenic | 45.0% | |
| ! | GATAACATGAAGTTGGCTCC+TGG | + | chr3_1:86399670-86399689 | Msa0383470:exon | 45.0% |
| ATTGACATGCGTGTCTGGTA+TGG | + | chr3_1:86399791-86399810 | Msa0383470:intron | 45.0% | |
| TTGACATGCGTGTCTGGTAT+GGG | + | chr3_1:86399792-86399811 | Msa0383470:intron | 45.0% | |
| ! | AGATCACACAAGGCATCCAA+AGG | - | chr3_1:86399962-86399981 | None:intergenic | 45.0% |
| ! | AGATCACACAAGGCATCCAA+GGG | - | chr3_1:86399962-86399981 | None:intergenic | 45.0% |
| ! | AAGATCACACAAGGCATCCA+AGG | - | chr3_1:86399963-86399982 | None:intergenic | 45.0% |
| GCATCTTATTGGTAGAGGGA+AGG | + | chr3_1:86400222-86400241 | Msa0383470:intron | 45.0% | |
| ATCGTTAACTGTCTCAGCAG+TGG | + | chr3_1:86400271-86400290 | Msa0383470:intron | 45.0% | |
| TCGTTAACTGTCTCAGCAGT+GGG | + | chr3_1:86400272-86400291 | Msa0383470:intron | 45.0% | |
| CGACTAATATTGTGAGACGG+AGG | + | chr3_1:86401005-86401024 | Msa0383470:intron | 45.0% | |
| TTCTGTATCTTGCAGATGGC+TGG | + | chr3_1:86401326-86401345 | Msa0383470:intron | 45.0% | |
| AGGACGTTTCACTGTAGAGT+TGG | + | chr3_1:86401421-86401440 | Msa0383470:three_prime_UTR | 45.0% | |
| GGACGTTTCACTGTAGAGTT+GGG | + | chr3_1:86401422-86401441 | Msa0383470:three_prime_UTR | 45.0% | |
| GTTGGGCGCACAATATTGTT+TGG | + | chr3_1:86401439-86401458 | Msa0383470:three_prime_UTR | 45.0% | |
| ! | CTTGGTGATTTGTGGTTCAG+TGG | + | chr3_1:86401763-86401782 | Msa0383470:three_prime_UTR | 45.0% |
| !! | ATTAATTGAATAATTAAAAA+AGG | - | chr3_1:86394974-86394993 | None:intergenic | 5.0% |
| !!! | ATATTTTAGTAATAATATTT+AGG | - | chr3_1:86399309-86399328 | None:intergenic | 5.0% |
| !! | TTATTACTAAAATATAAATA+TGG | + | chr3_1:86399314-86399333 | Msa0383470:intron | 5.0% |
| !! | TCCGAACGAAGCTTTGTTGG+CGG | + | chr3_1:86395222-86395241 | Msa0383470:five_prime_UTR | 50.0% |
| ACCGCCAACAAAGCTTCGTT+CGG | - | chr3_1:86395226-86395245 | None:intergenic | 50.0% | |
| !! | AGCTTTGTTGGCGGTGTTGA+TGG | + | chr3_1:86395231-86395250 | Msa0383470:exon | 50.0% |
| GCGAAGACGAAAAGCTTCGT+AGG | - | chr3_1:86395259-86395278 | None:intergenic | 50.0% | |
| ATCGACCTCGGAAGTAACGA+AGG | - | chr3_1:86395305-86395324 | None:intergenic | 50.0% | |
| AAAAGGGTCATTGGATGCCG+AGG | + | chr3_1:86395962-86395981 | Msa0383470:CDS | 50.0% | |
| GACCTGCTTCTGTAGTTCAC+CGG | - | chr3_1:86396015-86396034 | None:intergenic | 50.0% | |
| !! | CATGAGCATTGAGCATGGCA+AGG | - | chr3_1:86396462-86396481 | None:intergenic | 50.0% |
| CTCAATGCTCATGCCTGGAA+GGG | + | chr3_1:86396469-86396488 | Msa0383470:intron | 50.0% | |
| ! | CTTTTCCCCTCTTGTCTTGG+TGG | + | chr3_1:86396528-86396547 | Msa0383470:intron | 50.0% |
| GCAGAAACCACCAAGACAAG+AGG | - | chr3_1:86396538-86396557 | None:intergenic | 50.0% | |
| GTAATGATTCGTGGCCGCTA+TGG | + | chr3_1:86396741-86396760 | Msa0383470:intron | 50.0% | |
| ACGTGCTCTTAAAGTTGCCG+AGG | + | chr3_1:86396958-86396977 | Msa0383470:CDS | 50.0% | |
| GCCAATGTTGTGTAGGATGG+TGG | + | chr3_1:86397012-86397031 | Msa0383470:intron | 50.0% | |
| ! | CTCGCTCAGCTCTTTTGCTT+TGG | - | chr3_1:86397118-86397137 | None:intergenic | 50.0% |
| CAAAGCAAAAGAGCTGAGCG+AGG | + | chr3_1:86397116-86397135 | Msa0383470:CDS | 50.0% | |
| TAGTGTACAGCAAGCCAAGG+AGG | - | chr3_1:86397496-86397515 | None:intergenic | 50.0% | |
| TGAACATGGGAAGCCTCTGT+TGG | + | chr3_1:86397636-86397655 | Msa0383470:CDS | 50.0% | |
| !! | CTCTAGGGCCTAGAATGCAT+AGG | - | chr3_1:86397814-86397833 | None:intergenic | 50.0% |
| !! | AAAATGGGCTGAACCTCACG+TGG | + | chr3_1:86397851-86397870 | Msa0383470:CDS | 50.0% |
| ACTGCAATTACTGTGCCCTG+TGG | + | chr3_1:86397932-86397951 | Msa0383470:intron | 50.0% | |
| TACTGTGCCCTGTGGTTAGA+TGG | + | chr3_1:86397940-86397959 | Msa0383470:intron | 50.0% | |
| CAACAAGCTATCAGGACCAC+GGG | - | chr3_1:86397999-86398018 | None:intergenic | 50.0% | |
| GACCACTGTTCTTTCACAGC+TGG | - | chr3_1:86398133-86398152 | None:intergenic | 50.0% | |
| CAGTGCTTGCACATGAGGTT+CGG | - | chr3_1:86398173-86398192 | None:intergenic | 50.0% | |
| GAAGTCAGTGCTTGCACATG+AGG | - | chr3_1:86398178-86398197 | None:intergenic | 50.0% | |
| ACTTGCTCCCCACTTGAACA+AGG | + | chr3_1:86398234-86398253 | Msa0383470:CDS | 50.0% | |
| GGTATTCTCAACCGGTTGAC+AGG | + | chr3_1:86398338-86398357 | Msa0383470:intron | 50.0% | |
| CTTTCGAGCTTCCTGTCAAC+CGG | - | chr3_1:86398352-86398371 | None:intergenic | 50.0% | |
| CATTGATCAGGTCGCTACTG+CGG | + | chr3_1:86398386-86398405 | Msa0383470:CDS | 50.0% | |
| AACCTGGCGATGATATGCAG+TGG | - | chr3_1:86398499-86398518 | None:intergenic | 50.0% | |
| GATAAGGAGTTGGAGGTCCT+GGG | - | chr3_1:86398643-86398662 | None:intergenic | 50.0% | |
| GCTAAGGGATAAGGAGTTGG+AGG | - | chr3_1:86398650-86398669 | None:intergenic | 50.0% | |
| TGCTGCTGCTGTTGTTAGCA+AGG | + | chr3_1:86398729-86398748 | Msa0383470:intron | 50.0% | |
| ACGTCTCTTGGACAGTAGCT+TGG | - | chr3_1:86399205-86399224 | None:intergenic | 50.0% | |
| AGCTTTACGACGAGTGTGGT+GGG | - | chr3_1:86399627-86399646 | None:intergenic | 50.0% | |
| ! | TAGCTTTACGACGAGTGTGG+TGG | - | chr3_1:86399628-86399647 | None:intergenic | 50.0% |
| !! | GCTTAGCTTTACGACGAGTG+TGG | - | chr3_1:86399631-86399650 | None:intergenic | 50.0% |
| ACTCGTCGTAAAGCTAAGCG+AGG | + | chr3_1:86399632-86399651 | Msa0383470:CDS | 50.0% | |
| GCATATTTGACCGGTGGCAT+TGG | + | chr3_1:86400185-86400204 | Msa0383470:intron | 50.0% | |
| TCAGACAATGCCAATGCCAC+CGG | - | chr3_1:86400198-86400217 | None:intergenic | 50.0% | |
| AGAGGGAAGGGTAGCTAAAG+TGG | + | chr3_1:86400235-86400254 | Msa0383470:intron | 50.0% | |
| ATGTTAACCTGTGCCCCTCA+AGG | + | chr3_1:86401078-86401097 | Msa0383470:intron | 50.0% | |
| AGCCTTTCCAACCTGCTCCT+CGG | - | chr3_1:86395982-86396001 | None:intergenic | 55.0% | |
| TGCCGGTGAACTACAGAAGC+AGG | + | chr3_1:86396010-86396029 | Msa0383470:CDS | 55.0% | |
| !! | CCAGGCATGAGCATTGAGCA+TGG | - | chr3_1:86396467-86396486 | None:intergenic | 55.0% |
| CCATGCTCAATGCTCATGCC+TGG | + | chr3_1:86396464-86396483 | Msa0383470:intron | 55.0% | |
| GCTCAATGCTCATGCCTGGA+AGG | + | chr3_1:86396468-86396487 | Msa0383470:intron | 55.0% | |
| AATGAGGACGATGCCCTTCC+AGG | - | chr3_1:86396485-86396504 | None:intergenic | 55.0% | |
| ATGGTGCTTGGCTTCCTCCT+TGG | + | chr3_1:86397479-86397498 | Msa0383470:CDS | 55.0% | |
| AGTCCGTGGCTGAGAGTCAT+TGG | + | chr3_1:86397611-86397630 | Msa0383470:intron | 55.0% | |
| TGTGCCCTGTGGTTAGATGG+TGG | + | chr3_1:86397943-86397962 | Msa0383470:intron | 55.0% | |
| TGCCACTGCATATCATCGCC+AGG | + | chr3_1:86398494-86398513 | Msa0383470:CDS | 55.0% | |
| ! | CTGGGTTGAAACCCGGATGA+AGG | - | chr3_1:86398625-86398644 | None:intergenic | 55.0% |
| CTTCATCCGGGTTTCAACCC+AGG | + | chr3_1:86398623-86398642 | Msa0383470:intron | 55.0% | |
| GGATAAGGAGTTGGAGGTCC+TGG | - | chr3_1:86398644-86398663 | None:intergenic | 55.0% | |
| CAAGAGGATCAGGAGGGGTT+GGG | - | chr3_1:86398690-86398709 | None:intergenic | 55.0% | |
| ACAAGAGGATCAGGAGGGGT+TGG | - | chr3_1:86398691-86398710 | None:intergenic | 55.0% | |
| GCAAGTAAACCCGCTCGAAG+TGG | + | chr3_1:86399596-86399615 | Msa0383470:CDS | 55.0% | |
| TGGGTGTTTCCACTTCGAGC+GGG | - | chr3_1:86399608-86399627 | None:intergenic | 55.0% | |
| GTGGGTGTTTCCACTTCGAG+CGG | - | chr3_1:86399609-86399628 | None:intergenic | 55.0% | |
| GGGAAGGGTAGCTAAAGTGG+AGG | + | chr3_1:86400238-86400257 | Msa0383470:intron | 55.0% | |
| ACTGTCTCAGCAGTGGGACT+TGG | + | chr3_1:86400278-86400297 | Msa0383470:intron | 55.0% | |
| TTGCAGATGGCTGGCACATG+TGG | + | chr3_1:86401335-86401354 | Msa0383470:intron | 55.0% | |
| TGCAGATGGCTGGCACATGT+GGG | + | chr3_1:86401336-86401355 | Msa0383470:intron | 55.0% | |
| GTCATTGGATGCCGAGGAGC+AGG | + | chr3_1:86395968-86395987 | Msa0383470:CDS | 60.0% | |
| TTGGATGCCGAGGAGCAGGT+TGG | + | chr3_1:86395972-86395991 | Msa0383470:CDS | 60.0% | |
| ! | TGCCGAGGAGCAGGTTGGAA+AGG | + | chr3_1:86395977-86395996 | Msa0383470:CDS | 60.0% |
| GGAAAGGCTCATGCACGTGC+CGG | + | chr3_1:86395993-86396012 | Msa0383470:CDS | 60.0% | |
| GGGAGCAAGTGCGTCCTTTG+AGG | - | chr3_1:86398224-86398243 | None:intergenic | 60.0% | |
| ! | GGAGGTCCTGGGTTGAAACC+CGG | - | chr3_1:86398632-86398651 | None:intergenic | 60.0% |
| GAGGGGTTGGGTAGCTCAAC+TGG | - | chr3_1:86398678-86398697 | None:intergenic | 60.0% | |
| ACACACAGCCCCCTACGATG+AGG | - | chr3_1:86398940-86398959 | None:intergenic | 60.0% | |
| TATGCAGGCCTCTGCCCTTC+TGG | + | chr3_1:86399370-86399389 | Msa0383470:intron | 60.0% | |
| CTGTCTCCACAGTGGGACTC+AGG | + | chr3_1:86400339-86400358 | Msa0383470:intron | 60.0% | |
| AGGCATCCTGAGTCCCACTG+TGG | - | chr3_1:86400348-86400367 | None:intergenic | 60.0% | |
| ! | ACTTGTGCCTTGAGGGGCAC+AGG | - | chr3_1:86401088-86401107 | None:intergenic | 60.0% |
| GCAGATGGCTGGCACATGTG+GGG | + | chr3_1:86401337-86401356 | Msa0383470:intron | 60.0% | |
| AGGCAAGGCCAGAAGGGCAG+AGG | - | chr3_1:86399381-86399400 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 86394809 | 86401848 | 86394809 | ID=Msa0383470;Name=Msa0383470 |
| chr3_1 | mRNA | 86394809 | 86401848 | 86394809 | ID=Msa0383470-mRNA-1;Parent=Msa0383470;Name=Msa0383470-mRNA-1;_AED=0.12;_eAED=0.12;_QI=441|1|1|1|0.92|0.86|15|556|439 |
| chr3_1 | exon | 86394809 | 86395400 | 86394809 | ID=Msa0383470-mRNA-1:exon:22838;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86395667 | 86395794 | 86395667 | ID=Msa0383470-mRNA-1:exon:22839;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86395960 | 86396031 | 86395960 | ID=Msa0383470-mRNA-1:exon:22840;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86396110 | 86396223 | 86396110 | ID=Msa0383470-mRNA-1:exon:22841;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86396911 | 86396979 | 86396911 | ID=Msa0383470-mRNA-1:exon:22842;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86397081 | 86397137 | 86397081 | ID=Msa0383470-mRNA-1:exon:22843;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86397475 | 86397528 | 86397475 | ID=Msa0383470-mRNA-1:exon:22844;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86397613 | 86397675 | 86397613 | ID=Msa0383470-mRNA-1:exon:22845;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86397825 | 86397887 | 86397825 | ID=Msa0383470-mRNA-1:exon:22846;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86398121 | 86398285 | 86398121 | ID=Msa0383470-mRNA-1:exon:22847;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86398360 | 86398515 | 86398360 | ID=Msa0383470-mRNA-1:exon:22848;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86399200 | 86399280 | 86399200 | ID=Msa0383470-mRNA-1:exon:22849;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86399377 | 86399438 | 86399377 | ID=Msa0383470-mRNA-1:exon:22850;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86399586 | 86399718 | 86399586 | ID=Msa0383470-mRNA-1:exon:22851;Parent=Msa0383470-mRNA-1 |
| chr3_1 | exon | 86401341 | 86401848 | 86401341 | ID=Msa0383470-mRNA-1:exon:22852;Parent=Msa0383470-mRNA-1 |
| chr3_1 | five_prime_UTR | 86394809 | 86395249 | 86394809 | ID=Msa0383470-mRNA-1:five_prime_utr;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86395250 | 86395400 | 86395250 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86395667 | 86395794 | 86395667 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86395960 | 86396031 | 86395960 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86396110 | 86396223 | 86396110 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86396911 | 86396979 | 86396911 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86397081 | 86397137 | 86397081 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86397475 | 86397528 | 86397475 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86397613 | 86397675 | 86397613 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86397825 | 86397887 | 86397825 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86398121 | 86398285 | 86398121 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86398360 | 86398515 | 86398360 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86399200 | 86399280 | 86399200 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86399377 | 86399438 | 86399377 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | CDS | 86399586 | 86399670 | 86399586 | ID=Msa0383470-mRNA-1:cds;Parent=Msa0383470-mRNA-1 |
| chr3_1 | three_prime_UTR | 86399671 | 86399718 | 86399671 | ID=Msa0383470-mRNA-1:three_prime_utr;Parent=Msa0383470-mRNA-1 |
| chr3_1 | three_prime_UTR | 86401341 | 86401848 | 86401341 | ID=Msa0383470-mRNA-1:three_prime_utr;Parent=Msa0383470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
