Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416120 | G7J2W4 | 98.861 | 439 | 5 | 0 | 1 | 439 | 1 | 439 | 0.0 | 871 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0383470 | Msa1416120 | 0.868925 | 4.542123e-66 | -8.615850e-47 |
| Msa0477410 | Msa1416120 | 0.817509 | 3.178809e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416120 | MtrunA17_Chr3g0139321 | 98.861 | 439 | 5 | 0 | 1 | 439 | 1 | 439 | 0.0 | 871 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416120 | AT4G31340.1 | 58.924 | 409 | 162 | 4 | 31 | 439 | 35 | 437 | 3.66e-166 | 474 |
| Msa1416120 | AT2G24420.1 | 54.779 | 429 | 183 | 5 | 17 | 439 | 17 | 440 | 4.56e-161 | 462 |
| Msa1416120 | AT2G24420.2 | 54.779 | 429 | 183 | 5 | 17 | 439 | 17 | 440 | 4.56e-161 | 462 |
| Msa1416120 | AT4G31340.2 | 58.961 | 385 | 154 | 2 | 31 | 415 | 35 | 415 | 2.57e-156 | 449 |
| Msa1416120 | AT4G30090.1 | 30.617 | 405 | 212 | 7 | 40 | 437 | 44 | 386 | 2.37e-52 | 181 |
Find 133 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAATTGAGTTGATCTAAT+TGG | 0.198323 | tig0024317:-52142 | None:intergenic |
| AAGAAGGTTGTTCTCGCTTA+TGG | 0.201487 | tig0024317:+55234 | Msa1416120:CDS |
| AAGAATAAACCAAATGAAAA+AGG | 0.209802 | tig0024317:-58690 | None:intergenic |
| AAGTAACGAAGGAGAAAATT+AGG | 0.226102 | tig0024317:-52070 | None:intergenic |
| AAAAGGCACAAGCTGGAAAA+TGG | 0.236033 | tig0024317:+54613 | Msa1416120:CDS |
| GTTTGGGTGTTCATGTATTA+TGG | 0.244150 | tig0024317:+57958 | Msa1416120:three_prime_UTR |
| ACTCTAGCTATTAAGATAAT+AGG | 0.265678 | tig0024317:-56176 | None:intergenic |
| TATGCAGGCCTCTGCCCTTC+TGG | 0.268328 | tig0024317:+56148 | Msa1416120:intron |
| GAAACTTATACCTGATAATA+AGG | 0.301355 | tig0024317:-55052 | None:intergenic |
| AACACAAGAATTGAAGAAAA+AGG | 0.318070 | tig0024317:+52464 | Msa1416120:CDS |
| TTGGATTGATACCGAGGAAT+TGG | 0.318579 | tig0024317:-52169 | None:intergenic |
| GAATGAGGTTGCTTCTCTTC+AGG | 0.323946 | tig0024317:+52551 | Msa1416120:CDS |
| ATTCTAGGCCCTAGAGAAAA+AGG | 0.331966 | tig0024317:+54596 | Msa1416120:intron |
| ACCTCTTGCTACTAAAGAAT+TGG | 0.345133 | tig0024317:+56025 | Msa1416120:CDS |
| GAATGCTACTCAACTTATCT+TGG | 0.345760 | tig0024317:-52518 | None:intergenic |
| ATCTAAGACTAACCAGAAAA+TGG | 0.347393 | tig0024317:-56207 | None:intergenic |
| TAACGTCATGAAATTGAAAA+TGG | 0.347523 | tig0024317:-58807 | None:intergenic |
| TCTCGCTTATGGGAATTTCT+TGG | 0.348918 | tig0024317:+55245 | Msa1416120:CDS |
| GTTGGGCGCACAATATTGTT+TGG | 0.350041 | tig0024317:+57941 | Msa1416120:three_prime_UTR |
| AGCTTTGTTGGCGGTGTTGA+TGG | 0.364823 | tig0024317:+52010 | Msa1416120:exon |
| ATTCATGGTTTATTCTTTGT+TGG | 0.369797 | tig0024317:+58653 | Msa1416120:three_prime_UTR |
| CTTCATGTTATCTACTTGTC+TGG | 0.380045 | tig0024317:-56437 | None:intergenic |
| TTCTGTATCTTGCAGATGGC+TGG | 0.383427 | tig0024317:+57828 | Msa1416120:intron |
| ATGGTGCTTGGCTTCCTCCT+TGG | 0.385003 | tig0024317:+54257 | Msa1416120:CDS |
| TATCATCTGCAGCAGCAAAA+AGG | 0.397213 | tig0024317:+56352 | Msa1416120:intron |
| ATCACACAGAAACTGATTCA+TGG | 0.400074 | tig0024317:+58638 | Msa1416120:three_prime_UTR |
| AGAAGGTTGTTCTCGCTTAT+GGG | 0.403445 | tig0024317:+55235 | Msa1416120:CDS |
| ATGTGTAGATCCTTATTATC+AGG | 0.406758 | tig0024317:+55042 | Msa1416120:CDS |
| AATCTTGATACCAAACCCTT+TGG | 0.418992 | tig0024317:+51906 | Msa1416120:five_prime_UTR |
| TTGGGCGCACAATATTGTTT+GGG | 0.423150 | tig0024317:+57942 | Msa1416120:three_prime_UTR |
| ATAGTACAGACAACCGGAAT+AGG | 0.424295 | tig0024317:-58609 | None:intergenic |
| TAGATTTAGAGCGCCTATTC+CGG | 0.428852 | tig0024317:+58596 | Msa1416120:three_prime_UTR |
| GATACCGAGGAATTGGATCT+TGG | 0.433047 | tig0024317:-52162 | None:intergenic |
| GGACGTTTCACTGTAGAGTT+GGG | 0.436568 | tig0024317:+57924 | Msa1416120:three_prime_UTR |
| CATATAAAGGTGGTGGATGT+TGG | 0.438582 | tig0024317:-51725 | None:intergenic |
| GTCATTGGATGCCGAGGAGC+AGG | 0.448017 | tig0024317:+52746 | Msa1416120:CDS |
| TTGCAGATGGCTGGCACATG+TGG | 0.454398 | tig0024317:+57837 | Msa1416120:intron |
| GGGAGCAAGTGCGTCCTTTG+AGG | 0.460893 | tig0024317:-54999 | None:intergenic |
| AGAAAGTGAACTGGGAATCT+CGG | 0.463402 | tig0024317:+52928 | Msa1416120:CDS |
| AAAGGCACAAGCTGGAAAAT+GGG | 0.463620 | tig0024317:+54614 | Msa1416120:CDS |
| TGCAGATGGCTGGCACATGT+GGG | 0.465313 | tig0024317:+57838 | Msa1416120:intron |
| GACCACTGTTCTTTCACAGC+TGG | 0.466702 | tig0024317:-54908 | None:intergenic |
| GTTGGAAGTGATATCTCAAA+AGG | 0.468095 | tig0024317:+54432 | Msa1416120:CDS |
| TAAAGAATTGGAATGGTTTG+CGG | 0.470283 | tig0024317:+56037 | Msa1416120:CDS |
| CAGTGCTTGCACATGAGGTT+CGG | 0.473641 | tig0024317:-54948 | None:intergenic |
| TAGCAAGCCATACATTGATC+AGG | 0.474392 | tig0024317:+55152 | Msa1416120:CDS |
| AGTAACGAAGGAGAAAATTA+GGG | 0.474409 | tig0024317:-52069 | None:intergenic |
| AGTCCGTGGCTGAGAGTCAT+TGG | 0.476512 | tig0024317:+54389 | Msa1416120:intron |
| TTAGTTAACTTGGTGATTTG+TGG | 0.480086 | tig0024317:+58767 | Msa1416120:three_prime_UTR |
| AAAACAGTGAGAAAGTGAAC+TGG | 0.480727 | tig0024317:+52919 | Msa1416120:CDS |
| TCCGAACGAAGCTTTGTTGG+CGG | 0.488781 | tig0024317:+52001 | Msa1416120:five_prime_UTR |
| AATAAACATATACTTGAAAG+TGG | 0.489711 | tig0024317:-58574 | None:intergenic |
| AGGACGTTTCACTGTAGAGT+TGG | 0.493477 | tig0024317:+57923 | Msa1416120:three_prime_UTR |
| AGAACAACCTTCTTTGTGTA+GGG | 0.494541 | tig0024317:-55225 | None:intergenic |
| GAAGTCAGTGCTTGCACATG+AGG | 0.495088 | tig0024317:-54953 | None:intergenic |
| AACATAAAAGAGTGAGTACC+AGG | 0.495735 | tig0024317:-58511 | None:intergenic |
| ATGATACTGTTTAGTTAACT+TGG | 0.502504 | tig0024317:+58757 | Msa1416120:three_prime_UTR |
| TGTACACTATATTCGTAGTA+AGG | 0.505415 | tig0024317:+54285 | Msa1416120:CDS |
| GAAAGTGAACTGGGAATCTC+GGG | 0.506911 | tig0024317:+52929 | Msa1416120:CDS |
| CATTCAATCCTTGCAGAATG+AGG | 0.508270 | tig0024317:+52536 | Msa1416120:CDS |
| ACCCTATTTGTTATTAAACC+TGG | 0.509872 | tig0024317:+58493 | Msa1416120:intron |
| ATGATCAGACTCATGGTGCT+TGG | 0.513875 | tig0024317:+54245 | Msa1416120:intron |
| ACGTCTCTTGGACAGTAGCT+TGG | 0.519002 | tig0024317:-55980 | None:intergenic |
| TTGCTACTAAAGAATTGGAA+TGG | 0.520379 | tig0024317:+56030 | Msa1416120:CDS |
| TATTTAGGAAGAAATGTTGA+AGG | 0.522472 | tig0024317:+53852 | Msa1416120:intron |
| AAACTTATAGTACAGACAAC+CGG | 0.522653 | tig0024317:-58615 | None:intergenic |
| ACCGCCAACAAAGCTTCGTT+CGG | 0.522762 | tig0024317:-52002 | None:intergenic |
| AAAGGAACATATAAAGGTGG+TGG | 0.525507 | tig0024317:-51732 | None:intergenic |
| ACAAGTAGATAACATGAAGT+TGG | 0.525848 | tig0024317:+56441 | Msa1416120:exon |
| AGATAATAGGCAAGGCCAGA+AGG | 0.525870 | tig0024317:-56163 | None:intergenic |
| TCCAATTCTTTAGTAGCAAG+AGG | 0.528573 | tig0024317:-56026 | None:intergenic |
| TGCCACTGCATATCATCGCC+AGG | 0.528771 | tig0024317:+55272 | Msa1416120:CDS |
| GTAGCGACCTGATCAATGTA+TGG | 0.537102 | tig0024317:-55159 | None:intergenic |
| AGCTTTACGACGAGTGTGGT+GGG | 0.538967 | tig0024317:-56402 | None:intergenic |
| CTACATATTTATTTGAACGT+GGG | 0.542254 | tig0024317:+57862 | Msa1416120:three_prime_UTR |
| TGCCGGTGAACTACAGAAGC+AGG | 0.548974 | tig0024317:+52788 | Msa1416120:CDS |
| AGGCAAGGCCAGAAGGGCAG+AGG | 0.549576 | tig0024317:-56156 | None:intergenic |
| TGAACATGGGAAGCCTCTGT+TGG | 0.550076 | tig0024317:+54414 | Msa1416120:CDS |
| GGAAAGGCTCATGCACGTGC+CGG | 0.552710 | tig0024317:+52771 | Msa1416120:CDS |
| GATAACATGAAGTTGGCTCC+TGG | 0.552779 | tig0024317:+56448 | Msa1416120:exon |
| GAGAGTCATTGGAATGAACA+TGG | 0.556843 | tig0024317:+54400 | Msa1416120:CDS |
| TTTCTCCTTCGTTACTTCCG+AGG | 0.559854 | tig0024317:+52076 | Msa1416120:CDS |
| TGCCGAGGAGCAGGTTGGAA+AGG | 0.563199 | tig0024317:+52755 | Msa1416120:CDS |
| CTTGGTGATTTGTGGTTCAG+TGG | 0.564093 | tig0024317:+58775 | Msa1416120:three_prime_UTR |
| TACATATTTATTTGAACGTG+GGG | 0.566874 | tig0024317:+57863 | Msa1416120:three_prime_UTR |
| ACAGGTTCAAAAGATAAATG+AGG | 0.567365 | tig0024317:+53685 | Msa1416120:intron |
| TAGCTTTACGACGAGTGTGG+TGG | 0.567556 | tig0024317:-56403 | None:intergenic |
| GAGAACAACCTTCTTTGTGT+AGG | 0.572587 | tig0024317:-55226 | None:intergenic |
| GATAATAGGCAAGGCCAGAA+GGG | 0.576847 | tig0024317:-56162 | None:intergenic |
| ATAGCGAAGACGAAAAGCTT+CGG | 0.580873 | tig0024317:-52038 | None:intergenic |
| GCAGATGGCTGGCACATGTG+GGG | 0.581179 | tig0024317:+57839 | Msa1416120:intron |
| GACCTGCTTCTGTAGTTCAC+CGG | 0.583896 | tig0024317:-52790 | None:intergenic |
| TGGGTGTTTCCACTTCGAGC+GGG | 0.584384 | tig0024317:-56383 | None:intergenic |
| GCTTAGCTTTACGACGAGTG+TGG | 0.588964 | tig0024317:-56406 | None:intergenic |
| AATTCCAAGATCCAATTCCT+CGG | 0.589768 | tig0024317:+52158 | Msa1416120:CDS |
| AAAATGGGCTGAACCTCACG+TGG | 0.592865 | tig0024317:+54629 | Msa1416120:CDS |
| ACTTGCTCCCCACTTGAACA+AGG | 0.596960 | tig0024317:+55012 | Msa1416120:CDS |
| AGCCTTTCCAACCTGCTCCT+CGG | 0.598082 | tig0024317:-52757 | None:intergenic |
| TGAGATATCACTTCCAACAG+AGG | 0.601782 | tig0024317:-54427 | None:intergenic |
| AGCTATTAAGATAATAGGCA+AGG | 0.602545 | tig0024317:-56171 | None:intergenic |
| TCTGAAGCCCTACACAAAGA+AGG | 0.603321 | tig0024317:+55218 | Msa1416120:CDS |
| ACTTGTATATTCTCAACATG+AGG | 0.604598 | tig0024317:-55192 | None:intergenic |
| GCAAGTAAACCCGCTCGAAG+TGG | 0.604975 | tig0024317:+56374 | Msa1416120:CDS |
| GCTACATATTTATTTGAACG+TGG | 0.607894 | tig0024317:+57861 | Msa1416120:three_prime_UTR |
| TGAAGTTTACAAGTCCTCAA+AGG | 0.607940 | tig0024317:+54985 | Msa1416120:CDS |
| GAAGGAGAAAATTAGGGCAA+CGG | 0.609746 | tig0024317:-52063 | None:intergenic |
| TTGGATGCCGAGGAGCAGGT+TGG | 0.613773 | tig0024317:+52750 | Msa1416120:CDS |
| AGAGGAATCAGAATCTTCGA+TGG | 0.619773 | tig0024317:-52108 | None:intergenic |
| AAAAGGGTCATTGGATGCCG+AGG | 0.621224 | tig0024317:+52740 | Msa1416120:CDS |
| TGATTTGAACTCAAAACTAG+AGG | 0.624974 | tig0024317:+52977 | Msa1416120:CDS |
| AAACAGTGAGAAAGTGAACT+GGG | 0.625922 | tig0024317:+52920 | Msa1416120:CDS |
| AATGTTGAAGGCAAAGCTAG+AGG | 0.629492 | tig0024317:+53864 | Msa1416120:CDS |
| GTGGGTGTTTCCACTTCGAG+CGG | 0.630465 | tig0024317:-56384 | None:intergenic |
| TTCGATGGAAACATCGACCT+CGG | 0.634140 | tig0024317:-52093 | None:intergenic |
| CATTGATCAGGTCGCTACTG+CGG | 0.635282 | tig0024317:+55164 | Msa1416120:CDS |
| TAATTGGATCTTAAGAGCAG+AGG | 0.640351 | tig0024317:-52126 | None:intergenic |
| AGAAGCAACCTCATTCTGCA+AGG | 0.645724 | tig0024317:-52544 | None:intergenic |
| TAAAGTGAGATCTAAACATG+TGG | 0.647367 | tig0024317:-51594 | None:intergenic |
| TCATGTTGAGAATATACAAG+TGG | 0.650587 | tig0024317:+55194 | Msa1416120:CDS |
| ATCGACCTCGGAAGTAACGA+AGG | 0.651869 | tig0024317:-52081 | None:intergenic |
| ACGTGCTCTTAAAGTTGCCG+AGG | 0.655385 | tig0024317:+53736 | Msa1416120:CDS |
| ATTCCAATGACTCTCAGCCA+CGG | 0.657274 | tig0024317:-54392 | None:intergenic |
| ATATAGTGTACAGCAAGCCA+AGG | 0.657714 | tig0024317:-54274 | None:intergenic |
| GGTGTTAATGATCAGACTCA+TGG | 0.658662 | tig0024317:+54238 | Msa1416120:intron |
| TAGTGTACAGCAAGCCAAGG+AGG | 0.659126 | tig0024317:-54271 | None:intergenic |
| GCGAAGACGAAAAGCTTCGG+AGG | 0.668584 | tig0024317:-52035 | None:intergenic |
| AGAGTCATTGGAATGAACAT+GGG | 0.671207 | tig0024317:+54401 | Msa1416120:CDS |
| GTGGTCTGTGGTGAAAACAA+AGG | 0.688492 | tig0024317:+54925 | Msa1416120:CDS |
| CAAAGCAAAAGAGCTGAGCG+AGG | 0.693194 | tig0024317:+53894 | Msa1416120:CDS |
| TGTGAAAGAACAGTGGTCTG+TGG | 0.702105 | tig0024317:+54913 | Msa1416120:CDS |
| TTCCAGCTGTGAAAGAACAG+TGG | 0.708355 | tig0024317:+54906 | Msa1416120:CDS |
| ACTCGTCGTAAAGCTAAGCG+AGG | 0.711196 | tig0024317:+56410 | Msa1416120:CDS |
| AACCTGGCGATGATATGCAG+TGG | 0.744590 | tig0024317:-55274 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCTATATTTTTTTTTTTG+AGG | + | tig0024317:51629-51648 | Msa1416120:five_prime_UTR | 10.0% |
| !!! | TTCTATATTTTTTTTTTTGA+GGG | + | tig0024317:51630-51649 | Msa1416120:five_prime_UTR | 10.0% |
| !!! | GAAAAAATAATAATTTTGAA+GGG | - | tig0024317:52713-52732 | None:intergenic | 10.0% |
| !! | ACTAAAATTAACTTAAAAAT+AGG | + | tig0024317:58362-58381 | Msa1416120:intron | 10.0% |
| !! | CTAAAATTAACTTAAAAATA+GGG | + | tig0024317:58363-58382 | Msa1416120:intron | 10.0% |
| !!! | TCTATATTTTTTTTTTTGAG+GGG | + | tig0024317:51631-51650 | Msa1416120:five_prime_UTR | 15.0% |
| !! | ATTAAAAAAGGAACATATAA+AGG | - | tig0024317:51741-51760 | None:intergenic | 15.0% |
| !!! | GGAAAAAATAATAATTTTGA+AGG | - | tig0024317:52714-52733 | None:intergenic | 15.0% |
| !!! | CTTAATTTTTTTTCATTAAG+TGG | - | tig0024317:53551-53570 | None:intergenic | 15.0% |
| !!! | TATCAAAACATAATTTTGTT+AGG | + | tig0024317:53634-53653 | Msa1416120:intron | 15.0% |
| !!! | TTCTATTGATATTCTTATTT+AGG | + | tig0024317:53837-53856 | Msa1416120:intron | 15.0% |
| !!! | ATATAAGGAATTTTTTTACT+AGG | - | tig0024317:54115-54134 | None:intergenic | 15.0% |
| !!! | TTATTTTATAGTAAACTATC+AGG | - | tig0024317:54165-54184 | None:intergenic | 15.0% |
| !!! | GTACTATATGATATTTATTT+TGG | + | tig0024317:54454-54473 | Msa1416120:intron | 15.0% |
| !! | ATTCAAAAAAATAATACAAG+AGG | - | tig0024317:55339-55358 | None:intergenic | 15.0% |
| !!! | TCTTGTATTATTTTTTTGAA+TGG | + | tig0024317:55338-55357 | Msa1416120:intron | 15.0% |
| !! | ACTAAAATATAAATATGGTT+AGG | + | tig0024317:56097-56116 | Msa1416120:intron | 15.0% |
| !! | AAAAAAAAACAATTCAGTAT+GGG | - | tig0024317:56253-56272 | None:intergenic | 15.0% |
| !!! | TGTAGATCTAATTTTTTATT+TGG | + | tig0024317:56683-56702 | Msa1416120:intron | 15.0% |
| !!! | GTAGATCTAATTTTTTATTT+GGG | + | tig0024317:56684-56703 | Msa1416120:intron | 15.0% |
| !!! | TAGATCTAATTTTTTATTTG+GGG | + | tig0024317:56685-56704 | Msa1416120:intron | 15.0% |
| !! | TCATTAATAAGTTTATAGTT+TGG | + | tig0024317:57554-57573 | Msa1416120:intron | 15.0% |
| !! | CATTAATAAGTTTATAGTTT+GGG | + | tig0024317:57555-57574 | Msa1416120:intron | 15.0% |
| !!! | TTAATGGAATATTTCTATTT+TGG | + | tig0024317:57695-57714 | Msa1416120:intron | 15.0% |
| !!! | TAATGGAATATTTCTATTTT+GGG | + | tig0024317:57696-57715 | Msa1416120:intron | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | + | tig0024317:58394-58413 | Msa1416120:intron | 15.0% |
| !! | TTCAAATCATCTAAAAAGAA+AGG | + | tig0024317:51866-51885 | Msa1416120:five_prime_UTR | 20.0% |
| !!! | AATTATGATAACTGAGATTT+TGG | - | tig0024317:52191-52210 | None:intergenic | 20.0% |
| !! | AAGAAGTTCATAAAAAAACT+TGG | - | tig0024317:52279-52298 | None:intergenic | 20.0% |
| !! | AAATGCTTCAAAAATAATAC+AGG | - | tig0024317:52635-52654 | None:intergenic | 20.0% |
| !!! | GTATTATTTTTGAAGCATTT+TGG | + | tig0024317:52635-52654 | Msa1416120:intron | 20.0% |
| !!! | TTATTTTTTCCTCAGAAAAA+AGG | + | tig0024317:52723-52742 | Msa1416120:intron | 20.0% |
| !!! | TATTTTTTCCTCAGAAAAAA+GGG | + | tig0024317:52724-52743 | Msa1416120:intron | 20.0% |
| !!! | TTTTTTTTCATTAAGTGGTT+AGG | - | tig0024317:53546-53565 | None:intergenic | 20.0% |
| !! | AATAAACTGACATTATTAGA+TGG | - | tig0024317:53615-53634 | None:intergenic | 20.0% |
| !! | TAAAAAGATTACATGGTTTA+GGG | - | tig0024317:53940-53959 | None:intergenic | 20.0% |
| !! | TTAAAAAGATTACATGGTTT+AGG | - | tig0024317:53941-53960 | None:intergenic | 20.0% |
| !! | CAACATTTAAAAAGATTACA+TGG | - | tig0024317:53947-53966 | None:intergenic | 20.0% |
| !!! | ATAATCATGGATAACTTTTA+AGG | - | tig0024317:53985-54004 | None:intergenic | 20.0% |
| !! | TTCATCTATATACAAGAAAA+TGG | - | tig0024317:54059-54078 | None:intergenic | 20.0% |
| !! | TTCCTTATATTATGTGATAT+TGG | + | tig0024317:54125-54144 | Msa1416120:intron | 20.0% |
| !! | TACCAATATCACATAATATA+AGG | - | tig0024317:54130-54149 | None:intergenic | 20.0% |
| !!! | TATTATGTGATATTGGTAAT+TGG | + | tig0024317:54132-54151 | Msa1416120:intron | 20.0% |
| !! | ATAAAATAAACTATCAGACA+AGG | + | tig0024317:54176-54195 | Msa1416120:intron | 20.0% |
| !!! | TTTTATTAATTGATGCTTAC+TGG | + | tig0024317:54217-54236 | Msa1416120:intron | 20.0% |
| !! | ATTATTAGATGATGTGAATA+AGG | - | tig0024317:54351-54370 | None:intergenic | 20.0% |
| !! | AGATAAATATGATAGACTTA+CGG | - | tig0024317:54667-54686 | None:intergenic | 20.0% |
| !! | AGCAGAAATATATAAATAGT+AGG | - | tig0024317:55313-55332 | None:intergenic | 20.0% |
| !!! | AGATTCTATTTTCAATTATC+TGG | - | tig0024317:55590-55609 | None:intergenic | 20.0% |
| !! | AAAATATAAATATGGTTAGG+TGG | + | tig0024317:56100-56119 | Msa1416120:intron | 20.0% |
| !! | ATATCAAATTGAAATTATGC+AGG | + | tig0024317:56133-56152 | Msa1416120:intron | 20.0% |
| !! | GAAAAAAAAACAATTCAGTA+TGG | - | tig0024317:56254-56273 | None:intergenic | 20.0% |
| !! | CTTGCAAAATAAAAAATTCA+AGG | - | tig0024317:56630-56649 | None:intergenic | 20.0% |
| !! | AATATACTCTTCTAATCAAA+TGG | - | tig0024317:57240-57259 | None:intergenic | 20.0% |
| !!! | TTGATTAGAAGAGTATATTT+AGG | + | tig0024317:57241-57260 | Msa1416120:intron | 20.0% |
| !!! | AATATTTTTCTCAAACGTTT+TGG | - | tig0024317:57268-57287 | None:intergenic | 20.0% |
| !!! | TAATTTTGTTTCCTTTTTCA+AGG | - | tig0024317:57366-57385 | None:intergenic | 20.0% |
| !! | TAGAAAGCTAAAAACTATAA+GGG | - | tig0024317:57761-57780 | None:intergenic | 20.0% |
| !! | ATAGAAAGCTAAAAACTATA+AGG | - | tig0024317:57762-57781 | None:intergenic | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | - | tig0024317:58110-58129 | None:intergenic | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | - | tig0024317:58111-58130 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | - | tig0024317:58390-58409 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | + | tig0024317:58393-58412 | Msa1416120:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTAAA+GGG | + | tig0024317:58454-58473 | Msa1416120:intron | 20.0% |
| !!! | AATAGGGTTAAATATGTTTT+TGG | - | tig0024317:58481-58500 | None:intergenic | 20.0% |
| !! | AATAAACATATACTTGAAAG+TGG | - | tig0024317:58577-58596 | None:intergenic | 20.0% |
| !! | AGAATAAACCAAATGAAAAA+GGG | - | tig0024317:58692-58711 | None:intergenic | 20.0% |
| !! | AAGAATAAACCAAATGAAAA+AGG | - | tig0024317:58693-58712 | None:intergenic | 20.0% |
| ! | AAAAAAGGAACATATAAAGG+TGG | - | tig0024317:51738-51757 | None:intergenic | 25.0% |
| ! | TCAATTAGTTGAAATTACTG+AGG | + | tig0024317:52333-52352 | Msa1416120:intron | 25.0% |
| !! | AATTACTGAGGAAATTTTTG+TGG | + | tig0024317:52345-52364 | Msa1416120:intron | 25.0% |
| ! | GGCTAGTAATTTACAAATTT+AGG | + | tig0024317:52366-52385 | Msa1416120:intron | 25.0% |
| ! | AACACAAGAATTGAAGAAAA+AGG | + | tig0024317:52464-52483 | Msa1416120:CDS | 25.0% |
| !!! | TTAGGGATTTTTCAATCATT+AGG | + | tig0024317:52600-52619 | Msa1416120:intron | 25.0% |
| ! | TTTAAGCAAATAACAACAAG+TGG | - | tig0024317:52690-52709 | None:intergenic | 25.0% |
| !! | ATGAATCTTTTTCTCTAACT+TGG | - | tig0024317:52958-52977 | None:intergenic | 25.0% |
| !! | TGAAGTAAATCTGAGTTTTA+TGG | + | tig0024317:53041-53060 | Msa1416120:intron | 25.0% |
| ! | TATTTAGGAAGAAATGTTGA+AGG | + | tig0024317:53852-53871 | Msa1416120:intron | 25.0% |
| ! | AAAAAGATTACATGGTTTAG+GGG | - | tig0024317:53939-53958 | None:intergenic | 25.0% |
| ! | TCTTGTATATAGATGAATGA+AGG | + | tig0024317:54062-54081 | Msa1416120:intron | 25.0% |
| ! | CTTCAATAAATTATAGATCC+AGG | + | tig0024317:54504-54523 | Msa1416120:intron | 25.0% |
| !! | CTTTCATACTTTTGATCTTT+AGG | + | tig0024317:54685-54704 | Msa1416120:intron | 25.0% |
| !!! | TCCTAGTTTGTTAAATACTT+GGG | + | tig0024317:54829-54848 | Msa1416120:intron | 25.0% |
| ! | GAAACTTATACCTGATAATA+AGG | - | tig0024317:55055-55074 | None:intergenic | 25.0% |
| !! | GTTTGTTTATGTTTTTCTTG+AGG | + | tig0024317:55095-55114 | Msa1416120:intron | 25.0% |
| ! | TAAATAAAATCACACATTGC+AGG | - | tig0024317:55533-55552 | None:intergenic | 25.0% |
| ! | TTGAAAATAGAATCTTCAGT+TGG | + | tig0024317:55595-55614 | Msa1416120:intron | 25.0% |
| !! | TCTTTTCATGATATGCTTTT+TGG | + | tig0024317:55740-55759 | Msa1416120:intron | 25.0% |
| ! | ACTCTAGCTATTAAGATAAT+AGG | - | tig0024317:56179-56198 | None:intergenic | 25.0% |
| ! | CAAATACAACTAGAAATATC+AGG | - | tig0024317:56298-56317 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGGAGAGAAGTTT+AGG | + | tig0024317:56474-56493 | Msa1416120:three_prime_UTR | 25.0% |
| ! | AAAAATATCAAAGCATGCTA+GGG | - | tig0024317:56531-56550 | None:intergenic | 25.0% |
| ! | AAAAAATATCAAAGCATGCT+AGG | - | tig0024317:56532-56551 | None:intergenic | 25.0% |
| ! | ATCGCTGAATAAAAAATTCA+AGG | - | tig0024317:56877-56896 | None:intergenic | 25.0% |
| ! | CTTAAATATGCATATTTGAC+CGG | + | tig0024317:56953-56972 | Msa1416120:intron | 25.0% |
| !! | AAAAATTCAAAGCATCTAGT+CGG | - | tig0024317:57171-57190 | None:intergenic | 25.0% |
| ! | TTCAAAAACATAGATTTCAG+AGG | + | tig0024317:57197-57216 | Msa1416120:intron | 25.0% |
| !! | TAATCAAATGGAGAAGTATA+GGG | - | tig0024317:57228-57247 | None:intergenic | 25.0% |
| !! | ATGGTGCTTTTATAGTTAAA+AGG | - | tig0024317:57309-57328 | None:intergenic | 25.0% |
| ! | TTTAAACAGAGAAGATGAAA+TGG | - | tig0024317:57328-57347 | None:intergenic | 25.0% |
| ! | TTCATCTTCTCTGTTTAAAT+AGG | + | tig0024317:57329-57348 | Msa1416120:intron | 25.0% |
| ! | TTTGTGAAAATCCTTGAAAA+AGG | + | tig0024317:57352-57371 | Msa1416120:intron | 25.0% |
| ! | CAAATGTAGAAACTTTATGT+TGG | + | tig0024317:57618-57637 | Msa1416120:intron | 25.0% |
| ! | GTTGAATGCACAAATATTAA+TGG | + | tig0024317:57679-57698 | Msa1416120:intron | 25.0% |
| ! | CTACATATTTATTTGAACGT+GGG | + | tig0024317:57862-57881 | Msa1416120:three_prime_UTR | 25.0% |
| ! | TACATATTTATTTGAACGTG+GGG | + | tig0024317:57863-57882 | Msa1416120:three_prime_UTR | 25.0% |
| !! | TTGAATATTGCACTTCTTTT+TGG | + | tig0024317:57887-57906 | Msa1416120:three_prime_UTR | 25.0% |
| !! | TGAATATTGCACTTCTTTTT+GGG | + | tig0024317:57888-57907 | Msa1416120:three_prime_UTR | 25.0% |
| !!! | TTTTTGGGTTAGGTAAATTT+AGG | + | tig0024317:57903-57922 | Msa1416120:three_prime_UTR | 25.0% |
| ! | TTATGGCTGTTATATTTGTT+AGG | + | tig0024317:57975-57994 | Msa1416120:intron | 25.0% |
| !! | TATGGCTGTTATATTTGTTA+GGG | + | tig0024317:57976-57995 | Msa1416120:intron | 25.0% |
| !!! | GCAAAGTTGGTATATTTATA+GGG | - | tig0024317:58019-58038 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | tig0024317:58050-58069 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | tig0024317:58051-58070 | None:intergenic | 25.0% |
| !! | AAGTGAAGATGGAAAATTTT+TGG | - | tig0024317:58082-58101 | None:intergenic | 25.0% |
| !! | AAATTTTCCATCTTCACTTT+TGG | + | tig0024317:58083-58102 | Msa1416120:intron | 25.0% |
| ! | AAGTTGAAGGAAAAATTTAG+AGG | + | tig0024317:58422-58441 | Msa1416120:intron | 25.0% |
| ! | AGTTGAAGGAAAAATTTAGA+GGG | + | tig0024317:58423-58442 | Msa1416120:intron | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAA+AGG | + | tig0024317:58453-58472 | Msa1416120:intron | 25.0% |
| ! | ACCAGGTTTAATAACAAATA+GGG | - | tig0024317:58497-58516 | None:intergenic | 25.0% |
| ! | TACCAGGTTTAATAACAAAT+AGG | - | tig0024317:58498-58517 | None:intergenic | 25.0% |
| ! | ATTCATGGTTTATTCTTTGT+TGG | + | tig0024317:58653-58672 | Msa1416120:three_prime_UTR | 25.0% |
| !! | TATCATTACACAATTTTCAG+AGG | - | tig0024317:58743-58762 | None:intergenic | 25.0% |
| ! | ATGATACTGTTTAGTTAACT+TGG | + | tig0024317:58757-58776 | Msa1416120:three_prime_UTR | 25.0% |
| ! | TAACGTCATGAAATTGAAAA+TGG | - | tig0024317:58810-58829 | None:intergenic | 25.0% |
| TAAAGTGAGATCTAAACATG+TGG | - | tig0024317:51597-51616 | None:intergenic | 30.0% | |
| !!! | TTTTGTAAAAAAGAGTGTCG+TGG | - | tig0024317:51696-51715 | None:intergenic | 30.0% |
| AGTAACGAAGGAGAAAATTA+GGG | - | tig0024317:52072-52091 | None:intergenic | 30.0% | |
| AAGTAACGAAGGAGAAAATT+AGG | - | tig0024317:52073-52092 | None:intergenic | 30.0% | |
| !! | TGGAATTGAGTTGATCTAAT+TGG | - | tig0024317:52145-52164 | None:intergenic | 30.0% |
| ! | TTTGTGAATCGTGATTTTTG+TGG | + | tig0024317:52399-52418 | Msa1416120:intron | 30.0% |
| GATTGAAAAATCCCTAAAGA+GGG | - | tig0024317:52597-52616 | None:intergenic | 30.0% | |
| TGATTGAAAAATCCCTAAAG+AGG | - | tig0024317:52598-52617 | None:intergenic | 30.0% | |
| ! | TAGTCTGAAATTCTTAATGC+AGG | + | tig0024317:52866-52885 | Msa1416120:intron | 30.0% |
| TGATTTGAACTCAAAACTAG+AGG | + | tig0024317:52977-52996 | Msa1416120:CDS | 30.0% | |
| CAGATAAAAAAAGTTAGCAG+AGG | - | tig0024317:53395-53414 | None:intergenic | 30.0% | |
| ! | AACTTTCACATTGCCTATTT+TGG | + | tig0024317:53447-53466 | Msa1416120:intron | 30.0% |
| ! | ACTTTCACATTGCCTATTTT+GGG | + | tig0024317:53448-53467 | Msa1416120:intron | 30.0% |
| ! | TCATTTATCTTTTGAACCTG+TGG | - | tig0024317:53686-53705 | None:intergenic | 30.0% |
| ACAGGTTCAAAAGATAAATG+AGG | + | tig0024317:53685-53704 | Msa1416120:intron | 30.0% | |
| TGAGCGAGGTAATAATTTAT+TGG | + | tig0024317:53908-53927 | Msa1416120:intron | 30.0% | |
| !!! | TAACTTTTAAGGTTTTCTGG+TGG | - | tig0024317:53974-53993 | None:intergenic | 30.0% |
| !!! | GGATAACTTTTAAGGTTTTC+TGG | - | tig0024317:53977-53996 | None:intergenic | 30.0% |
| TGTACACTATATTCGTAGTA+AGG | + | tig0024317:54285-54304 | Msa1416120:CDS | 30.0% | |
| !! | TTTTCTTTTTTGTTAGTCCG+TGG | + | tig0024317:54375-54394 | Msa1416120:intron | 30.0% |
| AGAAGAAGAAGAATTAAACC+TGG | - | tig0024317:54525-54544 | None:intergenic | 30.0% | |
| !! | CTCCTAGTTTGTTAAATACT+TGG | + | tig0024317:54828-54847 | Msa1416120:intron | 30.0% |
| CATTTCTTCAGTTGAAAACA+GGG | - | tig0024317:54884-54903 | None:intergenic | 30.0% | |
| ! | CTGTTTTCAACTGAAGAAAT+GGG | + | tig0024317:54883-54902 | Msa1416120:intron | 30.0% |
| ATGTGTAGATCCTTATTATC+AGG | + | tig0024317:55042-55061 | Msa1416120:CDS | 30.0% | |
| AGTTTCTTCATTGAACTGTA+TGG | + | tig0024317:55069-55088 | Msa1416120:intron | 30.0% | |
| ACTTGTATATTCTCAACATG+AGG | - | tig0024317:55195-55214 | None:intergenic | 30.0% | |
| TCATGTTGAGAATATACAAG+TGG | + | tig0024317:55194-55213 | Msa1416120:CDS | 30.0% | |
| !!! | AGTTTTTTTTCTCCTTCATC+CGG | + | tig0024317:55388-55407 | Msa1416120:intron | 30.0% |
| ACAACAACAACAAATACAAG+AGG | - | tig0024317:55484-55503 | None:intergenic | 30.0% | |
| TTGACTAGATTTCAGATTGT+GGG | - | tig0024317:55657-55676 | None:intergenic | 30.0% | |
| TTTGACTAGATTTCAGATTG+TGG | - | tig0024317:55658-55677 | None:intergenic | 30.0% | |
| GTGATGTCATAATATCAAGT+TGG | - | tig0024317:55682-55701 | None:intergenic | 30.0% | |
| ATTGCAACATGATATAGACA+TGG | + | tig0024317:55765-55784 | Msa1416120:intron | 30.0% | |
| CACAAAATGATAAGCAGAAA+GGG | - | tig0024317:55797-55816 | None:intergenic | 30.0% | |
| TCACAAAATGATAAGCAGAA+AGG | - | tig0024317:55798-55817 | None:intergenic | 30.0% | |
| ! | TTCTGCTTATCATTTTGTGA+TGG | + | tig0024317:55798-55817 | Msa1416120:intron | 30.0% |
| ! | TCTGCTTATCATTTTGTGAT+GGG | + | tig0024317:55799-55818 | Msa1416120:intron | 30.0% |
| TTTCAAAGAATAAGCAGTGA+GGG | - | tig0024317:55854-55873 | None:intergenic | 30.0% | |
| ATTTCAAAGAATAAGCAGTG+AGG | - | tig0024317:55855-55874 | None:intergenic | 30.0% | |
| TATTAGTTCCAGATCTTGAA+CGG | + | tig0024317:55878-55897 | Msa1416120:intron | 30.0% | |
| AGACAATTCAACACTCAAAA+AGG | - | tig0024317:55945-55964 | None:intergenic | 30.0% | |
| GAATTGTCTTTCGTTATTCA+AGG | + | tig0024317:55956-55975 | Msa1416120:intron | 30.0% | |
| TTGCTACTAAAGAATTGGAA+TGG | + | tig0024317:56030-56049 | Msa1416120:CDS | 30.0% | |
| TAAAGAATTGGAATGGTTTG+CGG | + | tig0024317:56037-56056 | Msa1416120:CDS | 30.0% | |
| AGCTATTAAGATAATAGGCA+AGG | - | tig0024317:56174-56193 | None:intergenic | 30.0% | |
| ! | ATCTAAGACTAACCAGAAAA+TGG | - | tig0024317:56210-56229 | None:intergenic | 30.0% |
| ACAAGTAGATAACATGAAGT+TGG | + | tig0024317:56441-56460 | Msa1416120:exon | 30.0% | |
| TCTCTCCAAAAAAATAAACC+AGG | - | tig0024317:56469-56488 | None:intergenic | 30.0% | |
| CATGTCAATAACATAGCTTA+TGG | - | tig0024317:56557-56576 | None:intergenic | 30.0% | |
| ! | TTATTTGGGGAAAACTGTTT+TGG | + | tig0024317:56698-56717 | Msa1416120:intron | 30.0% |
| ! | TATTTGGGGAAAACTGTTTT+GGG | + | tig0024317:56699-56718 | Msa1416120:intron | 30.0% |
| ! | TGCATATTTAAGATCACACA+AGG | - | tig0024317:56945-56964 | None:intergenic | 30.0% |
| CTTAAAAACTTGTGAAAACC+AGG | + | tig0024317:57084-57103 | Msa1416120:intron | 30.0% | |
| ! | CTAATCAAATGGAGAAGTAT+AGG | - | tig0024317:57229-57248 | None:intergenic | 30.0% |
| GCTACATATTTATTTGAACG+TGG | + | tig0024317:57861-57880 | Msa1416120:three_prime_UTR | 30.0% | |
| !! | CGCAAAGTTGGTATATTTAT+AGG | - | tig0024317:58020-58039 | None:intergenic | 30.0% |
| !! | TGAAGATGGAAAATTTTTGG+AGG | - | tig0024317:58079-58098 | None:intergenic | 30.0% |
| TTATAGGGACTAAAAGTTGA+AGG | + | tig0024317:58409-58428 | Msa1416120:intron | 30.0% | |
| !! | ACCCTATTTGTTATTAAACC+TGG | + | tig0024317:58493-58512 | Msa1416120:intron | 30.0% |
| AAACTTATAGTACAGACAAC+CGG | - | tig0024317:58618-58637 | None:intergenic | 30.0% | |
| !! | CATGTTTTCCCTTTTTCATT+TGG | + | tig0024317:58681-58700 | Msa1416120:three_prime_UTR | 30.0% |
| ! | TTAGTTAACTTGGTGATTTG+TGG | + | tig0024317:58767-58786 | Msa1416120:three_prime_UTR | 30.0% |
| AAAGGAACATATAAAGGTGG+TGG | - | tig0024317:51735-51754 | None:intergenic | 35.0% | |
| AATCTTGATACCAAACCCTT+TGG | + | tig0024317:51906-51925 | Msa1416120:five_prime_UTR | 35.0% | |
| TAATTGGATCTTAAGAGCAG+AGG | - | tig0024317:52129-52148 | None:intergenic | 35.0% | |
| AATTCCAAGATCCAATTCCT+CGG | + | tig0024317:52158-52177 | Msa1416120:CDS | 35.0% | |
| TTCCTAAATCGATGTTACTG+TGG | + | tig0024317:52299-52318 | Msa1416120:intron | 35.0% | |
| GAATGCTACTCAACTTATCT+TGG | - | tig0024317:52521-52540 | None:intergenic | 35.0% | |
| ! | TTTTCACTAGACCCTCTTTA+GGG | + | tig0024317:52583-52602 | Msa1416120:intron | 35.0% |
| AAAACAGTGAGAAAGTGAAC+TGG | + | tig0024317:52919-52938 | Msa1416120:CDS | 35.0% | |
| AAACAGTGAGAAAGTGAACT+GGG | + | tig0024317:52920-52939 | Msa1416120:CDS | 35.0% | |
| GACACGTTAATAAAGCAATG+AGG | - | tig0024317:53279-53298 | None:intergenic | 35.0% | |
| ATAGGCAATGTGAAAGTTGT+GGG | - | tig0024317:53445-53464 | None:intergenic | 35.0% | |
| AATAGGCAATGTGAAAGTTG+TGG | - | tig0024317:53446-53465 | None:intergenic | 35.0% | |
| AATCATTACACCTGCACATT+TGG | - | tig0024317:53508-53527 | None:intergenic | 35.0% | |
| ! | TTTTCTTGCCAATGTTGTGT+AGG | + | tig0024317:53783-53802 | Msa1416120:intron | 35.0% |
| CACACTGTTGCTAATAATCA+TGG | - | tig0024317:53998-54017 | None:intergenic | 35.0% | |
| CATGATTATTAGCAACAGTG+TGG | + | tig0024317:53996-54015 | Msa1416120:intron | 35.0% | |
| AGAGTCATTGGAATGAACAT+GGG | + | tig0024317:54401-54420 | Msa1416120:CDS | 35.0% | |
| GTTGGAAGTGATATCTCAAA+AGG | + | tig0024317:54432-54451 | Msa1416120:CDS | 35.0% | |
| CGGGTAAAACAAACAAATTG+TGG | - | tig0024317:54758-54777 | None:intergenic | 35.0% | |
| !!! | CAATTTGTTTGTTTTACCCG+TGG | + | tig0024317:54758-54777 | Msa1416120:intron | 35.0% |
| TAAATGGTCAACAAGCTATC+AGG | - | tig0024317:54785-54804 | None:intergenic | 35.0% | |
| !! | TGATAGCTTGTTGACCATTT+AGG | + | tig0024317:54784-54803 | Msa1416120:intron | 35.0% |
| CCAATGTTGAAACTCCTAAA+TGG | - | tig0024317:54801-54820 | None:intergenic | 35.0% | |
| CCATTTAGGAGTTTCAACAT+TGG | + | tig0024317:54798-54817 | Msa1416120:intron | 35.0% | |
| GCCCAAGTATTTAACAAACT+AGG | - | tig0024317:54833-54852 | None:intergenic | 35.0% | |
| CCATTTCTTCAGTTGAAAAC+AGG | - | tig0024317:54885-54904 | None:intergenic | 35.0% | |
| ! | CCTGTTTTCAACTGAAGAAA+TGG | + | tig0024317:54882-54901 | Msa1416120:intron | 35.0% |
| TGAAGTTTACAAGTCCTCAA+AGG | + | tig0024317:54985-55004 | Msa1416120:CDS | 35.0% | |
| !! | TTCTTTTGCCTTGTTCAAGT+GGG | - | tig0024317:55023-55042 | None:intergenic | 35.0% |
| !! | ATTCTTTTGCCTTGTTCAAG+TGG | - | tig0024317:55024-55043 | None:intergenic | 35.0% |
| ! | TTTCTTGAGGTATTCTCAAC+CGG | + | tig0024317:55108-55127 | Msa1416120:intron | 35.0% |
| AGAACAACCTTCTTTGTGTA+GGG | - | tig0024317:55228-55247 | None:intergenic | 35.0% | |
| !!! | GTTTTTTTTCTCCTTCATCC+GGG | + | tig0024317:55389-55408 | Msa1416120:intron | 35.0% |
| ACAACAAATACAAGAGGATC+AGG | - | tig0024317:55478-55497 | None:intergenic | 35.0% | |
| TCTGGTGTAGATATACAGTA+TGG | - | tig0024317:55572-55591 | None:intergenic | 35.0% | |
| ACGATGAGGAAACATTAGTA+TGG | - | tig0024317:55704-55723 | None:intergenic | 35.0% | |
| TACTAATGTTTCCTCATCGT+AGG | + | tig0024317:55704-55723 | Msa1416120:intron | 35.0% | |
| ACTAATGTTTCCTCATCGTA+GGG | + | tig0024317:55705-55724 | Msa1416120:intron | 35.0% | |
| AAAACAAACCGTTCAAGATC+TGG | - | tig0024317:55889-55908 | None:intergenic | 35.0% | |
| ACCTCTTGCTACTAAAGAAT+TGG | + | tig0024317:56025-56044 | Msa1416120:CDS | 35.0% | |
| TCCAATTCTTTAGTAGCAAG+AGG | - | tig0024317:56029-56048 | None:intergenic | 35.0% | |
| !!! | GAGTTTTTTCTGCCATTTTC+TGG | + | tig0024317:56195-56214 | Msa1416120:CDS | 35.0% |
| GAGTAAGTGCATATATGGAA+AGG | - | tig0024317:56276-56295 | None:intergenic | 35.0% | |
| ATCAGGAGTAAGTGCATATA+TGG | - | tig0024317:56281-56300 | None:intergenic | 35.0% | |
| CTTCATGTTATCTACTTGTC+TGG | - | tig0024317:56440-56459 | None:intergenic | 35.0% | |
| !!! | TGGCTCCTGGTTTATTTTTT+TGG | + | tig0024317:56461-56480 | Msa1416120:three_prime_UTR | 35.0% |
| ! | TGCACATTTAAGATCACACA+AGG | - | tig0024317:56749-56768 | None:intergenic | 35.0% |
| GAGACATGTTTCGTAAAAGT+CGG | - | tig0024317:56775-56794 | None:intergenic | 35.0% | |
| GTAATGCATAAGCTTATGTC+TGG | + | tig0024317:56810-56829 | Msa1416120:intron | 35.0% | |
| CATAAGCTTATGTCTGGTAT+GGG | + | tig0024317:56816-56835 | Msa1416120:intron | 35.0% | |
| AAATATGCATATTTGACCGG+TGG | + | tig0024317:56956-56975 | Msa1416120:intron | 35.0% | |
| ! | AATGTGAGAACTGAGAGTAT+TGG | + | tig0024317:57439-57458 | Msa1416120:intron | 35.0% |
| ! | GGAGTTTGGACATTGAATTT+TGG | + | tig0024317:57460-57479 | Msa1416120:intron | 35.0% |
| !!! | ATTGCACTTCTTTTTGGGTT+AGG | + | tig0024317:57893-57912 | Msa1416120:three_prime_UTR | 35.0% |
| GTTTGGGTGTTCATGTATTA+TGG | + | tig0024317:57958-57977 | Msa1416120:three_prime_UTR | 35.0% | |
| TTTGGAGGACTAAAAGTTGA+AGG | - | tig0024317:58064-58083 | None:intergenic | 35.0% | |
| AACATAAAAGAGTGAGTACC+AGG | - | tig0024317:58514-58533 | None:intergenic | 35.0% | |
| ! | ATCACACAGAAACTGATTCA+TGG | + | tig0024317:58638-58657 | Msa1416120:three_prime_UTR | 35.0% |
| !! | CATATAAAGGTGGTGGATGT+TGG | - | tig0024317:51728-51747 | None:intergenic | 40.0% |
| TGCTCAAAAACCAAAGGGTT+TGG | - | tig0024317:51919-51938 | None:intergenic | 40.0% | |
| TGCACTGCTCAAAAACCAAA+GGG | - | tig0024317:51924-51943 | None:intergenic | 40.0% | |
| TTGCACTGCTCAAAAACCAA+AGG | - | tig0024317:51925-51944 | None:intergenic | 40.0% | |
| !! | TTGGTTTTTGAGCAGTGCAA+TGG | + | tig0024317:51925-51944 | Msa1416120:five_prime_UTR | 40.0% |
| !! | TTTTCCGAACGAAGCTTTGT+TGG | + | tig0024317:51998-52017 | Msa1416120:five_prime_UTR | 40.0% |
| ATAGCGAAGACGAAAAGCTT+CGG | - | tig0024317:52041-52060 | None:intergenic | 40.0% | |
| GAAGGAGAAAATTAGGGCAA+CGG | - | tig0024317:52066-52085 | None:intergenic | 40.0% | |
| AGAGGAATCAGAATCTTCGA+TGG | - | tig0024317:52111-52130 | None:intergenic | 40.0% | |
| TTGGATTGATACCGAGGAAT+TGG | - | tig0024317:52172-52191 | None:intergenic | 40.0% | |
| ! | GAGATTTTGGATTGATACCG+AGG | - | tig0024317:52178-52197 | None:intergenic | 40.0% |
| !! | CACCACAGTAACATCGATTT+AGG | - | tig0024317:52304-52323 | None:intergenic | 40.0% |
| CATTCAATCCTTGCAGAATG+AGG | + | tig0024317:52536-52555 | Msa1416120:CDS | 40.0% | |
| ! | CTTTTCACTAGACCCTCTTT+AGG | + | tig0024317:52582-52601 | Msa1416120:intron | 40.0% |
| TCCTCAGAAAAAAGGGTCAT+TGG | + | tig0024317:52731-52750 | Msa1416120:intron | 40.0% | |
| !!! | TCCAATGACCCTTTTTTCTG+AGG | - | tig0024317:52735-52754 | None:intergenic | 40.0% |
| AGAAAGTGAACTGGGAATCT+CGG | + | tig0024317:52928-52947 | Msa1416120:CDS | 40.0% | |
| GAGGATGTAAGTTGTACACT+TGG | + | tig0024317:52996-53015 | Msa1416120:intron | 40.0% | |
| ACACGCACACAAACAAGAAT+AGG | - | tig0024317:53073-53092 | None:intergenic | 40.0% | |
| ! | TTTCTTTTCCCCTCTTGTCT+TGG | + | tig0024317:53303-53322 | Msa1416120:intron | 40.0% |
| ! | AAGTTGTGGGAGTGTAGTAA+AGG | - | tig0024317:53432-53451 | None:intergenic | 40.0% |
| TTGAGTAGTGTATTCTCCAC+AGG | + | tig0024317:53667-53686 | Msa1416120:intron | 40.0% | |
| !! | TAAGAGCACGTTCAGTTTTG+CGG | - | tig0024317:53727-53746 | None:intergenic | 40.0% |
| AATGTTGAAGGCAAAGCTAG+AGG | + | tig0024317:53864-53883 | Msa1416120:CDS | 40.0% | |
| CTATCAGACAAGGTGTATTG+TGG | + | tig0024317:54186-54205 | Msa1416120:intron | 40.0% | |
| GGTGTTAATGATCAGACTCA+TGG | + | tig0024317:54238-54257 | Msa1416120:intron | 40.0% | |
| ATATAGTGTACAGCAAGCCA+AGG | - | tig0024317:54277-54296 | None:intergenic | 40.0% | |
| GAGAGTCATTGGAATGAACA+TGG | + | tig0024317:54400-54419 | Msa1416120:CDS | 40.0% | |
| TGAGATATCACTTCCAACAG+AGG | - | tig0024317:54430-54449 | None:intergenic | 40.0% | |
| ! | ACGCTTTTCCTATGCATTCT+AGG | + | tig0024317:54581-54600 | Msa1416120:intron | 40.0% |
| ATTCTAGGCCCTAGAGAAAA+AGG | + | tig0024317:54596-54615 | Msa1416120:intron | 40.0% | |
| ! | AGCTTGTGCCTTTTTCTCTA+GGG | - | tig0024317:54607-54626 | None:intergenic | 40.0% |
| ! | AAAAGGCACAAGCTGGAAAA+TGG | + | tig0024317:54613-54632 | Msa1416120:CDS | 40.0% |
| ! | AAAGGCACAAGCTGGAAAAT+GGG | + | tig0024317:54614-54633 | Msa1416120:CDS | 40.0% |
| !! | GTTTTAATCGTTTCCACGTG+AGG | - | tig0024317:54645-54664 | None:intergenic | 40.0% |
| AAATCCACCATCTAACCACA+GGG | - | tig0024317:54728-54747 | None:intergenic | 40.0% | |
| !! | TCTTTTGCCTTGTTCAAGTG+GGG | - | tig0024317:55022-55041 | None:intergenic | 40.0% |
| TAGCAAGCCATACATTGATC+AGG | + | tig0024317:55152-55171 | Msa1416120:CDS | 40.0% | |
| GAGAACAACCTTCTTTGTGT+AGG | - | tig0024317:55229-55248 | None:intergenic | 40.0% | |
| AAGAAGGTTGTTCTCGCTTA+TGG | + | tig0024317:55234-55253 | Msa1416120:CDS | 40.0% | |
| AGAAGGTTGTTCTCGCTTAT+GGG | + | tig0024317:55235-55254 | Msa1416120:CDS | 40.0% | |
| TCTCGCTTATGGGAATTTCT+TGG | + | tig0024317:55245-55264 | Msa1416120:CDS | 40.0% | |
| AGGAAAGTAAAGTCTGAACC+TGG | - | tig0024317:55293-55312 | None:intergenic | 40.0% | |
| AAATACAAGAGGATCAGGAG+GGG | - | tig0024317:55473-55492 | None:intergenic | 40.0% | |
| CAAATACAAGAGGATCAGGA+GGG | - | tig0024317:55474-55493 | None:intergenic | 40.0% | |
| ACAAATACAAGAGGATCAGG+AGG | - | tig0024317:55475-55494 | None:intergenic | 40.0% | |
| GGTGTAGATATACAGTATGG+AGG | - | tig0024317:55569-55588 | None:intergenic | 40.0% | |
| CTAATGTTTCCTCATCGTAG+GGG | + | tig0024317:55706-55725 | Msa1416120:intron | 40.0% | |
| TAATGTTTCCTCATCGTAGG+GGG | + | tig0024317:55707-55726 | Msa1416120:intron | 40.0% | |
| ! | GAATGGTTTGCGGTATGTAT+TGG | + | tig0024317:56047-56066 | Msa1416120:intron | 40.0% |
| TATCATCTGCAGCAGCAAAA+AGG | + | tig0024317:56352-56371 | Msa1416120:intron | 40.0% | |
| ATGTTATTGACATGCGTGTC+TGG | + | tig0024317:56563-56582 | Msa1416120:intron | 40.0% | |
| GGTGTTCAATTGAACACCTT+TGG | + | tig0024317:56720-56739 | Msa1416120:intron | 40.0% | |
| GCATAAGCTTATGTCTGGTA+TGG | + | tig0024317:56815-56834 | Msa1416120:intron | 40.0% | |
| TTATACATCATGCACACCCT+TGG | + | tig0024317:56916-56935 | Msa1416120:intron | 40.0% | |
| TGTCTGAGTGAGCATCTTAT+TGG | + | tig0024317:56988-57007 | Msa1416120:intron | 40.0% | |
| AGTGAGCATCTTATTGGTAG+AGG | + | tig0024317:56994-57013 | Msa1416120:intron | 40.0% | |
| GTGAGCATCTTATTGGTAGA+GGG | + | tig0024317:56995-57014 | Msa1416120:intron | 40.0% | |
| CATCTTATTGGTAGAGGGAA+GGG | + | tig0024317:57000-57019 | Msa1416120:intron | 40.0% | |
| AGCTAAAGTGGAGGAAATTC+AGG | + | tig0024317:57024-57043 | Msa1416120:intron | 40.0% | |
| TGGAGACAGTTAATGATTCC+TGG | - | tig0024317:57105-57124 | None:intergenic | 40.0% | |
| ATCATTAACTGTCTCCACAG+TGG | + | tig0024317:57108-57127 | Msa1416120:intron | 40.0% | |
| TCATTAACTGTCTCCACAGT+GGG | + | tig0024317:57109-57128 | Msa1416120:intron | 40.0% | |
| ! | TGCGCATTTAAGATCACACA+AGG | - | tig0024317:57145-57164 | None:intergenic | 40.0% |
| CAATCAACTAAGAGACTGCT+CGG | - | tig0024317:57409-57428 | None:intergenic | 40.0% | |
| !! | GAACTGAGAGTATTGGAGTT+TGG | + | tig0024317:57446-57465 | Msa1416120:intron | 40.0% |
| !! | TCATTAACTTGTGCCTTGAG+GGG | - | tig0024317:57596-57615 | None:intergenic | 40.0% |
| !! | CTCATTAACTTGTGCCTTGA+GGG | - | tig0024317:57597-57616 | None:intergenic | 40.0% |
| !! | ACTCATTAACTTGTGCCTTG+AGG | - | tig0024317:57598-57617 | None:intergenic | 40.0% |
| ATTGCTTAACATGTGCCCTT+AGG | + | tig0024317:57719-57738 | Msa1416120:intron | 40.0% | |
| TTGCTTAACATGTGCCCTTA+GGG | + | tig0024317:57720-57739 | Msa1416120:intron | 40.0% | |
| !! | CTTGTTAACTTGTGCCCTAA+GGG | - | tig0024317:57737-57756 | None:intergenic | 40.0% |
| !! | TCTTGTTAACTTGTGCCCTA+AGG | - | tig0024317:57738-57757 | None:intergenic | 40.0% |
| CACTTTCTGTATCTTGCAGA+TGG | + | tig0024317:57824-57843 | Msa1416120:intron | 40.0% | |
| TTGGGCGCACAATATTGTTT+GGG | + | tig0024317:57942-57961 | Msa1416120:three_prime_UTR | 40.0% | |
| GAGGGACTAAAACGAAAAGT+TGG | + | tig0024317:58441-58460 | Msa1416120:intron | 40.0% | |
| ! | TAGATTTAGAGCGCCTATTC+CGG | + | tig0024317:58596-58615 | Msa1416120:three_prime_UTR | 40.0% |
| ATAGTACAGACAACCGGAAT+AGG | - | tig0024317:58612-58631 | None:intergenic | 40.0% | |
| !! | AAAAAGAGTGTCGTGGCTGA+GGG | - | tig0024317:51689-51708 | None:intergenic | 45.0% |
| !! | AAAAAAGAGTGTCGTGGCTG+AGG | - | tig0024317:51690-51709 | None:intergenic | 45.0% |
| TTTCTCCTTCGTTACTTCCG+AGG | + | tig0024317:52076-52095 | Msa1416120:CDS | 45.0% | |
| TTCGATGGAAACATCGACCT+CGG | - | tig0024317:52096-52115 | None:intergenic | 45.0% | |
| GATACCGAGGAATTGGATCT+TGG | - | tig0024317:52165-52184 | None:intergenic | 45.0% | |
| AGAAGCAACCTCATTCTGCA+AGG | - | tig0024317:52547-52566 | None:intergenic | 45.0% | |
| GAATGAGGTTGCTTCTCTTC+AGG | + | tig0024317:52551-52570 | Msa1416120:CDS | 45.0% | |
| GAAAGTGAACTGGGAATCTC+GGG | + | tig0024317:52929-52948 | Msa1416120:CDS | 45.0% | |
| AGAAACCACCAAGACAAGAG+GGG | - | tig0024317:53314-53333 | None:intergenic | 45.0% | |
| CAGAAACCACCAAGACAAGA+GGG | - | tig0024317:53315-53334 | None:intergenic | 45.0% | |
| TGGTTTCTGCTGAAAGTTGC+TGG | + | tig0024317:53326-53345 | Msa1416120:intron | 45.0% | |
| ! | TGTGGGAGTGTAGTAAAGGT+GGG | - | tig0024317:53428-53447 | None:intergenic | 45.0% |
| ! | TTGTGGGAGTGTAGTAAAGG+TGG | - | tig0024317:53429-53448 | None:intergenic | 45.0% |
| CCACAGCAATGACCCAAAAT+AGG | - | tig0024317:53463-53482 | None:intergenic | 45.0% | |
| !! | CCTATTTTGGGTCATTGCTG+TGG | + | tig0024317:53460-53479 | Msa1416120:intron | 45.0% |
| TCATCACTAGCCAAATGTGC+AGG | + | tig0024317:53495-53514 | Msa1416120:intron | 45.0% | |
| TGTGCAGGTGTAATGATTCG+TGG | + | tig0024317:53510-53529 | Msa1416120:intron | 45.0% | |
| TAATGATTCGTGGCCGCTAT+GGG | + | tig0024317:53520-53539 | Msa1416120:intron | 45.0% | |
| TTAAGTGGTTAGGCCCATAG+CGG | - | tig0024317:53536-53555 | None:intergenic | 45.0% | |
| ACTCACAGTCTCACATACCT+CGG | - | tig0024317:53756-53775 | None:intergenic | 45.0% | |
| CTTGCCAATGTTGTGTAGGA+TGG | + | tig0024317:53787-53806 | Msa1416120:intron | 45.0% | |
| ACCACCATCCTACACAACAT+TGG | - | tig0024317:53794-53813 | None:intergenic | 45.0% | |
| ATGATCAGACTCATGGTGCT+TGG | + | tig0024317:54245-54264 | Msa1416120:intron | 45.0% | |
| ATTCCAATGACTCTCAGCCA+CGG | - | tig0024317:54395-54414 | None:intergenic | 45.0% | |
| ! | CAGCTTGTGCCTTTTTCTCT+AGG | - | tig0024317:54608-54627 | None:intergenic | 45.0% |
| ! | CTAGAGAAAAAGGCACAAGC+TGG | + | tig0024317:54606-54625 | Msa1416120:CDS | 45.0% |
| CAAATCCACCATCTAACCAC+AGG | - | tig0024317:54729-54748 | None:intergenic | 45.0% | |
| TCAACAAGCTATCAGGACCA+CGG | - | tig0024317:54778-54797 | None:intergenic | 45.0% | |
| TTCCAGCTGTGAAAGAACAG+TGG | + | tig0024317:54906-54925 | Msa1416120:CDS | 45.0% | |
| TGTGAAAGAACAGTGGTCTG+TGG | + | tig0024317:54913-54932 | Msa1416120:CDS | 45.0% | |
| GTGGTCTGTGGTGAAAACAA+AGG | + | tig0024317:54925-54944 | Msa1416120:CDS | 45.0% | |
| GTAGCGACCTGATCAATGTA+TGG | - | tig0024317:55162-55181 | None:intergenic | 45.0% | |
| ! | TCTGAAGCCCTACACAAAGA+AGG | + | tig0024317:55218-55237 | Msa1416120:CDS | 45.0% |
| TGAGCTAAGGGATAAGGAGT+TGG | - | tig0024317:55431-55450 | None:intergenic | 45.0% | |
| ! | CTGGTTTGAGCTAAGGGATA+AGG | - | tig0024317:55437-55456 | None:intergenic | 45.0% |
| !! | GCTCAACTGGTTTGAGCTAA+GGG | - | tig0024317:55443-55462 | None:intergenic | 45.0% |
| !! | AGCTCAACTGGTTTGAGCTA+AGG | - | tig0024317:55444-55463 | None:intergenic | 45.0% |
| !!! | CGTGCTTTTTCAACGTCTCT+TGG | - | tig0024317:55995-56014 | None:intergenic | 45.0% |
| GATAATAGGCAAGGCCAGAA+GGG | - | tig0024317:56165-56184 | None:intergenic | 45.0% | |
| AGATAATAGGCAAGGCCAGA+AGG | - | tig0024317:56166-56185 | None:intergenic | 45.0% | |
| ! | GATAACATGAAGTTGGCTCC+TGG | + | tig0024317:56448-56467 | Msa1416120:exon | 45.0% |
| ! | AGATCACACAAGGCATCCAA+AGG | - | tig0024317:56739-56758 | None:intergenic | 45.0% |
| ! | AGATCACACAAGGCATCCAA+GGG | - | tig0024317:56739-56758 | None:intergenic | 45.0% |
| ! | AAGATCACACAAGGCATCCA+AGG | - | tig0024317:56740-56759 | None:intergenic | 45.0% |
| GCATCTTATTGGTAGAGGGA+AGG | + | tig0024317:56999-57018 | Msa1416120:intron | 45.0% | |
| ATCGTTAACTGTCTCAGCAG+TGG | + | tig0024317:57048-57067 | Msa1416120:intron | 45.0% | |
| TCGTTAACTGTCTCAGCAGT+GGG | + | tig0024317:57049-57068 | Msa1416120:intron | 45.0% | |
| TTCTGTATCTTGCAGATGGC+TGG | + | tig0024317:57828-57847 | Msa1416120:intron | 45.0% | |
| AGGACGTTTCACTGTAGAGT+TGG | + | tig0024317:57923-57942 | Msa1416120:three_prime_UTR | 45.0% | |
| GGACGTTTCACTGTAGAGTT+GGG | + | tig0024317:57924-57943 | Msa1416120:three_prime_UTR | 45.0% | |
| GTTGGGCGCACAATATTGTT+TGG | + | tig0024317:57941-57960 | Msa1416120:three_prime_UTR | 45.0% | |
| GAGGGACTAAAACGCAAAGT+TGG | - | tig0024317:58032-58051 | None:intergenic | 45.0% | |
| AGAGGGACCAAAAGTGAAGA+TGG | - | tig0024317:58093-58112 | None:intergenic | 45.0% | |
| ! | CTTGGTGATTTGTGGTTCAG+TGG | + | tig0024317:58775-58794 | Msa1416120:three_prime_UTR | 45.0% |
| !! | ATTAATTGAATAATTAAAAA+AGG | - | tig0024317:51753-51772 | None:intergenic | 5.0% |
| !!! | ATATTTTAGTAATAATATTT+AGG | - | tig0024317:56087-56106 | None:intergenic | 5.0% |
| !! | TTATTACTAAAATATAAATA+TGG | + | tig0024317:56092-56111 | Msa1416120:intron | 5.0% |
| !!! | AAAAAATTCTAAATTTTTTT+TGG | - | tig0024317:58195-58214 | None:intergenic | 5.0% |
| !!! | ATGAATTTTTATATATTTTA+TGG | + | tig0024317:58234-58253 | Msa1416120:intron | 5.0% |
| !!! | TAAAAAATTCTAATTTTTTT+TGG | + | tig0024317:58287-58306 | Msa1416120:intron | 5.0% |
| !! | TCCGAACGAAGCTTTGTTGG+CGG | + | tig0024317:52001-52020 | Msa1416120:five_prime_UTR | 50.0% |
| ACCGCCAACAAAGCTTCGTT+CGG | - | tig0024317:52005-52024 | None:intergenic | 50.0% | |
| !! | AGCTTTGTTGGCGGTGTTGA+TGG | + | tig0024317:52010-52029 | Msa1416120:exon | 50.0% |
| ATCGACCTCGGAAGTAACGA+AGG | - | tig0024317:52084-52103 | None:intergenic | 50.0% | |
| AAAAGGGTCATTGGATGCCG+AGG | + | tig0024317:52740-52759 | Msa1416120:CDS | 50.0% | |
| GACCTGCTTCTGTAGTTCAC+CGG | - | tig0024317:52793-52812 | None:intergenic | 50.0% | |
| !! | CATGAGCATTGAGCATGGCA+AGG | - | tig0024317:53240-53259 | None:intergenic | 50.0% |
| CTCAATGCTCATGCCTGGAA+GGG | + | tig0024317:53247-53266 | Msa1416120:intron | 50.0% | |
| ! | CTTTTCCCCTCTTGTCTTGG+TGG | + | tig0024317:53306-53325 | Msa1416120:intron | 50.0% |
| GCAGAAACCACCAAGACAAG+AGG | - | tig0024317:53316-53335 | None:intergenic | 50.0% | |
| GTAATGATTCGTGGCCGCTA+TGG | + | tig0024317:53519-53538 | Msa1416120:intron | 50.0% | |
| ACGTGCTCTTAAAGTTGCCG+AGG | + | tig0024317:53736-53755 | Msa1416120:CDS | 50.0% | |
| GCCAATGTTGTGTAGGATGG+TGG | + | tig0024317:53790-53809 | Msa1416120:intron | 50.0% | |
| ! | CTCGCTCAGCTCTTTTGCTT+TGG | - | tig0024317:53896-53915 | None:intergenic | 50.0% |
| CAAAGCAAAAGAGCTGAGCG+AGG | + | tig0024317:53894-53913 | Msa1416120:CDS | 50.0% | |
| TAGTGTACAGCAAGCCAAGG+AGG | - | tig0024317:54274-54293 | None:intergenic | 50.0% | |
| TGAACATGGGAAGCCTCTGT+TGG | + | tig0024317:54414-54433 | Msa1416120:CDS | 50.0% | |
| !! | CTCTAGGGCCTAGAATGCAT+AGG | - | tig0024317:54592-54611 | None:intergenic | 50.0% |
| !! | AAAATGGGCTGAACCTCACG+TGG | + | tig0024317:54629-54648 | Msa1416120:CDS | 50.0% |
| ACTGCAATTACTGTGCCCTG+TGG | + | tig0024317:54710-54729 | Msa1416120:intron | 50.0% | |
| TACTGTGCCCTGTGGTTAGA+TGG | + | tig0024317:54718-54737 | Msa1416120:intron | 50.0% | |
| CAACAAGCTATCAGGACCAC+GGG | - | tig0024317:54777-54796 | None:intergenic | 50.0% | |
| GACCACTGTTCTTTCACAGC+TGG | - | tig0024317:54911-54930 | None:intergenic | 50.0% | |
| CAGTGCTTGCACATGAGGTT+CGG | - | tig0024317:54951-54970 | None:intergenic | 50.0% | |
| GAAGTCAGTGCTTGCACATG+AGG | - | tig0024317:54956-54975 | None:intergenic | 50.0% | |
| ACTTGCTCCCCACTTGAACA+AGG | + | tig0024317:55012-55031 | Msa1416120:CDS | 50.0% | |
| GGTATTCTCAACCGGTTGAC+AGG | + | tig0024317:55116-55135 | Msa1416120:intron | 50.0% | |
| CTTTCGAGCTTCCTGTCAAC+CGG | - | tig0024317:55130-55149 | None:intergenic | 50.0% | |
| CATTGATCAGGTCGCTACTG+CGG | + | tig0024317:55164-55183 | Msa1416120:CDS | 50.0% | |
| AACCTGGCGATGATATGCAG+TGG | - | tig0024317:55277-55296 | None:intergenic | 50.0% | |
| GATAAGGAGTTGGAGGTCCT+GGG | - | tig0024317:55421-55440 | None:intergenic | 50.0% | |
| GCTAAGGGATAAGGAGTTGG+AGG | - | tig0024317:55428-55447 | None:intergenic | 50.0% | |
| TGCTGCTGCTGTTGTTAGCA+AGG | + | tig0024317:55507-55526 | Msa1416120:intron | 50.0% | |
| ACGTCTCTTGGACAGTAGCT+TGG | - | tig0024317:55983-56002 | None:intergenic | 50.0% | |
| AGCTTTACGACGAGTGTGGT+GGG | - | tig0024317:56405-56424 | None:intergenic | 50.0% | |
| ! | TAGCTTTACGACGAGTGTGG+TGG | - | tig0024317:56406-56425 | None:intergenic | 50.0% |
| !! | GCTTAGCTTTACGACGAGTG+TGG | - | tig0024317:56409-56428 | None:intergenic | 50.0% |
| ACTCGTCGTAAAGCTAAGCG+AGG | + | tig0024317:56410-56429 | Msa1416120:CDS | 50.0% | |
| GCATATTTGACCGGTGGCAT+TGG | + | tig0024317:56962-56981 | Msa1416120:intron | 50.0% | |
| TCAGACAATGCCAATGCCAC+CGG | - | tig0024317:56975-56994 | None:intergenic | 50.0% | |
| AGAGGGAAGGGTAGCTAAAG+TGG | + | tig0024317:57012-57031 | Msa1416120:intron | 50.0% | |
| ATGTTAACCTGTGCCCCTCA+AGG | + | tig0024317:57580-57599 | Msa1416120:intron | 50.0% | |
| GCGAAGACGAAAAGCTTCGG+AGG | - | tig0024317:52038-52057 | None:intergenic | 55.0% | |
| AGCCTTTCCAACCTGCTCCT+CGG | - | tig0024317:52760-52779 | None:intergenic | 55.0% | |
| TGCCGGTGAACTACAGAAGC+AGG | + | tig0024317:52788-52807 | Msa1416120:CDS | 55.0% | |
| !! | CCAGGCATGAGCATTGAGCA+TGG | - | tig0024317:53245-53264 | None:intergenic | 55.0% |
| CCATGCTCAATGCTCATGCC+TGG | + | tig0024317:53242-53261 | Msa1416120:intron | 55.0% | |
| GCTCAATGCTCATGCCTGGA+AGG | + | tig0024317:53246-53265 | Msa1416120:intron | 55.0% | |
| AATGAGGACGATGCCCTTCC+AGG | - | tig0024317:53263-53282 | None:intergenic | 55.0% | |
| ATGGTGCTTGGCTTCCTCCT+TGG | + | tig0024317:54257-54276 | Msa1416120:CDS | 55.0% | |
| AGTCCGTGGCTGAGAGTCAT+TGG | + | tig0024317:54389-54408 | Msa1416120:intron | 55.0% | |
| TGTGCCCTGTGGTTAGATGG+TGG | + | tig0024317:54721-54740 | Msa1416120:intron | 55.0% | |
| TGCCACTGCATATCATCGCC+AGG | + | tig0024317:55272-55291 | Msa1416120:CDS | 55.0% | |
| ! | CTGGGTTGAAACCCGGATGA+AGG | - | tig0024317:55403-55422 | None:intergenic | 55.0% |
| CTTCATCCGGGTTTCAACCC+AGG | + | tig0024317:55401-55420 | Msa1416120:intron | 55.0% | |
| GGATAAGGAGTTGGAGGTCC+TGG | - | tig0024317:55422-55441 | None:intergenic | 55.0% | |
| CAAGAGGATCAGGAGGGGTT+GGG | - | tig0024317:55468-55487 | None:intergenic | 55.0% | |
| ACAAGAGGATCAGGAGGGGT+TGG | - | tig0024317:55469-55488 | None:intergenic | 55.0% | |
| GCAAGTAAACCCGCTCGAAG+TGG | + | tig0024317:56374-56393 | Msa1416120:CDS | 55.0% | |
| TGGGTGTTTCCACTTCGAGC+GGG | - | tig0024317:56386-56405 | None:intergenic | 55.0% | |
| GTGGGTGTTTCCACTTCGAG+CGG | - | tig0024317:56387-56406 | None:intergenic | 55.0% | |
| GGGAAGGGTAGCTAAAGTGG+AGG | + | tig0024317:57015-57034 | Msa1416120:intron | 55.0% | |
| ACTGTCTCAGCAGTGGGACT+TGG | + | tig0024317:57055-57074 | Msa1416120:intron | 55.0% | |
| TTGCAGATGGCTGGCACATG+TGG | + | tig0024317:57837-57856 | Msa1416120:intron | 55.0% | |
| TGCAGATGGCTGGCACATGT+GGG | + | tig0024317:57838-57857 | Msa1416120:intron | 55.0% | |
| GTCATTGGATGCCGAGGAGC+AGG | + | tig0024317:52746-52765 | Msa1416120:CDS | 60.0% | |
| TTGGATGCCGAGGAGCAGGT+TGG | + | tig0024317:52750-52769 | Msa1416120:CDS | 60.0% | |
| ! | TGCCGAGGAGCAGGTTGGAA+AGG | + | tig0024317:52755-52774 | Msa1416120:CDS | 60.0% |
| GGAAAGGCTCATGCACGTGC+CGG | + | tig0024317:52771-52790 | Msa1416120:CDS | 60.0% | |
| GGGAGCAAGTGCGTCCTTTG+AGG | - | tig0024317:55002-55021 | None:intergenic | 60.0% | |
| ! | GGAGGTCCTGGGTTGAAACC+CGG | - | tig0024317:55410-55429 | None:intergenic | 60.0% |
| GAGGGGTTGGGTAGCTCAAC+TGG | - | tig0024317:55456-55475 | None:intergenic | 60.0% | |
| ACACACAGCCCCCTACGATG+AGG | - | tig0024317:55718-55737 | None:intergenic | 60.0% | |
| TATGCAGGCCTCTGCCCTTC+TGG | + | tig0024317:56148-56167 | Msa1416120:intron | 60.0% | |
| CTGTCTCCACAGTGGGACTC+AGG | + | tig0024317:57116-57135 | Msa1416120:intron | 60.0% | |
| AGGCATCCTGAGTCCCACTG+TGG | - | tig0024317:57125-57144 | None:intergenic | 60.0% | |
| ! | ACTTGTGCCTTGAGGGGCAC+AGG | - | tig0024317:57590-57609 | None:intergenic | 60.0% |
| GCAGATGGCTGGCACATGTG+GGG | + | tig0024317:57839-57858 | Msa1416120:intron | 60.0% | |
| AGGCAAGGCCAGAAGGGCAG+AGG | - | tig0024317:56159-56178 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024317 | gene | 51590 | 58860 | 51590 | ID=Msa1416120;Name=Msa1416120 |
| tig0024317 | mRNA | 51590 | 58860 | 51590 | ID=Msa1416120-mRNA-1;Parent=Msa1416120;Name=Msa1416120-mRNA-1;_AED=0.18;_eAED=0.18;_QI=439|1|1|1|0.86|0.81|16|555|439 |
| tig0024317 | exon | 51590 | 52179 | 51590 | ID=Msa1416120-mRNA-1:exon:22770;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 52445 | 52572 | 52445 | ID=Msa1416120-mRNA-1:exon:22771;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 52738 | 52809 | 52738 | ID=Msa1416120-mRNA-1:exon:22772;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 52888 | 53001 | 52888 | ID=Msa1416120-mRNA-1:exon:22773;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 53689 | 53757 | 53689 | ID=Msa1416120-mRNA-1:exon:22774;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 53859 | 53915 | 53859 | ID=Msa1416120-mRNA-1:exon:22775;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 54253 | 54306 | 54253 | ID=Msa1416120-mRNA-1:exon:22776;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 54391 | 54453 | 54391 | ID=Msa1416120-mRNA-1:exon:22777;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 54603 | 54665 | 54603 | ID=Msa1416120-mRNA-1:exon:22778;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 54899 | 55063 | 54899 | ID=Msa1416120-mRNA-1:exon:22779;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 55138 | 55293 | 55138 | ID=Msa1416120-mRNA-1:exon:22780;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 55978 | 56058 | 55978 | ID=Msa1416120-mRNA-1:exon:22781;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 56155 | 56216 | 56155 | ID=Msa1416120-mRNA-1:exon:22782;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 56364 | 56495 | 56364 | ID=Msa1416120-mRNA-1:exon:22783;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 57843 | 57992 | 57843 | ID=Msa1416120-mRNA-1:exon:22784;Parent=Msa1416120-mRNA-1 |
| tig0024317 | exon | 58503 | 58860 | 58503 | ID=Msa1416120-mRNA-1:exon:22785;Parent=Msa1416120-mRNA-1 |
| tig0024317 | five_prime_UTR | 51590 | 52028 | 51590 | ID=Msa1416120-mRNA-1:five_prime_utr;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 52029 | 52179 | 52029 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 52445 | 52572 | 52445 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 52738 | 52809 | 52738 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 52888 | 53001 | 52888 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 53689 | 53757 | 53689 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 53859 | 53915 | 53859 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 54253 | 54306 | 54253 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 54391 | 54453 | 54391 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 54603 | 54665 | 54603 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 54899 | 55063 | 54899 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 55138 | 55293 | 55138 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 55978 | 56058 | 55978 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 56155 | 56216 | 56155 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | CDS | 56364 | 56448 | 56364 | ID=Msa1416120-mRNA-1:cds;Parent=Msa1416120-mRNA-1 |
| tig0024317 | three_prime_UTR | 56449 | 56495 | 56449 | ID=Msa1416120-mRNA-1:three_prime_utr;Parent=Msa1416120-mRNA-1 |
| tig0024317 | three_prime_UTR | 57843 | 57992 | 57843 | ID=Msa1416120-mRNA-1:three_prime_utr;Parent=Msa1416120-mRNA-1 |
| tig0024317 | three_prime_UTR | 58503 | 58860 | 58503 | ID=Msa1416120-mRNA-1:three_prime_utr;Parent=Msa1416120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
