Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383920 | XP_013462060.1 | 97.483 | 596 | 15 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383920 | sp|O23247|SYRM_ARATH | 67.063 | 589 | 186 | 4 | 9 | 596 | 61 | 642 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383920 | A0A072VD42 | 97.483 | 596 | 15 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1206 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0383920 | Msa0434380 | 0.973387 | 2.418022e-136 | -8.615850e-47 |
| Msa0383920 | Msa0814620 | 0.823654 | 1.233214e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383920 | MtrunA17_Chr3g0140571 | 97.483 | 596 | 15 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1206 |
| Msa0383920 | MtrunA17_Chr1g0206941 | 92.127 | 597 | 45 | 2 | 1 | 596 | 1 | 596 | 0.0 | 1142 |
| Msa0383920 | MtrunA17_Chr6g0487211 | 76.471 | 595 | 138 | 2 | 3 | 596 | 66 | 659 | 0.0 | 978 |
| Msa0383920 | MtrunA17_Chr4g0056881 | 71.843 | 483 | 75 | 4 | 1 | 450 | 1 | 455 | 0.0 | 695 |
| Msa0383920 | MtrunA17_Chr4g0056871 | 89.041 | 146 | 16 | 0 | 451 | 596 | 11 | 156 | 1.83e-88 | 271 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383920 | AT4G26300.2 | 67.063 | 589 | 186 | 4 | 9 | 596 | 35 | 616 | 0.0 | 840 |
| Msa0383920 | AT4G26300.1 | 67.063 | 589 | 186 | 4 | 9 | 596 | 61 | 642 | 0.0 | 839 |
| Msa0383920 | AT4G26300.5 | 67.063 | 589 | 186 | 4 | 9 | 596 | 72 | 653 | 0.0 | 838 |
| Msa0383920 | AT4G26300.3 | 67.063 | 589 | 186 | 4 | 9 | 596 | 48 | 629 | 0.0 | 837 |
| Msa0383920 | AT4G26300.4 | 67.063 | 589 | 186 | 4 | 9 | 596 | 9 | 590 | 0.0 | 837 |
| Msa0383920 | AT1G66530.1 | 65.983 | 585 | 190 | 4 | 12 | 596 | 15 | 590 | 0.0 | 813 |
Find 174 sgRNAs with CRISPR-Local
Find 578 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCATTTCTTTCGCTATAT+TGG | 0.168416 | 3_1:-86958554 | None:intergenic |
| GCAACACATGCATCAATTAA+TGG | 0.172308 | 3_1:-86958037 | None:intergenic |
| TCAGATTCATTAACATCTTC+TGG | 0.173947 | 3_1:-86959219 | None:intergenic |
| TTGGAGAAACTGGAGAAATT+AGG | 0.196989 | 3_1:+86961604 | Msa0383920:CDS |
| TCCAAAGTTGGAGGGATTAA+TGG | 0.219730 | 3_1:-86961586 | None:intergenic |
| CAATTAAAATAAAATAAAAT+TGG | 0.227090 | 3_1:-86965315 | None:intergenic |
| TTTACCAGATTTCCTGATAA+TGG | 0.236837 | 3_1:-86964141 | None:intergenic |
| ACATCAGAGGCAATTGGATA+TGG | 0.260123 | 3_1:+86962762 | Msa0383920:CDS |
| CCCTCCAACTTTGGAGAAAC+TGG | 0.266401 | 3_1:+86961594 | Msa0383920:CDS |
| GAGAGCTTCCCCAAACAATT+TGG | 0.274479 | 3_1:-86957978 | None:intergenic |
| AAGCAATTGGCCAAATTGTT+TGG | 0.282832 | 3_1:+86957968 | Msa0383920:CDS |
| TGCATTTCTTTCGCTATATT+GGG | 0.283070 | 3_1:-86958553 | None:intergenic |
| AACATTTAAGAAGTTTATTA+TGG | 0.285076 | 3_1:+86965384 | Msa0383920:three_prime_UTR |
| TTCCCATGCCGTCCGATACT+TGG | 0.289745 | 3_1:-86960004 | None:intergenic |
| CACCTCAGGTCAACCATTAT+TGG | 0.294478 | 3_1:+86958583 | Msa0383920:CDS |
| GAGAGGAGTAGGGGCTCATT+TGG | 0.296284 | 3_1:-86957667 | None:intergenic |
| GGATATTCATTTGGATCCTT+TGG | 0.298860 | 3_1:-86962421 | None:intergenic |
| AAATTTCTTTGTGAAGATTT+CGG | 0.299407 | 3_1:-86964785 | None:intergenic |
| AGCAATTGGCCAAATTGTTT+GGG | 0.309303 | 3_1:+86957969 | Msa0383920:CDS |
| CTAGGATCTGTTCCATTATC+AGG | 0.309543 | 3_1:+86964129 | Msa0383920:CDS |
| ACCTCAGGTCAACCATTATT+GGG | 0.313878 | 3_1:+86958584 | Msa0383920:CDS |
| TACAATGAACATGGTGGATA+TGG | 0.317511 | 3_1:-86957832 | None:intergenic |
| TTTGTATTCCAAGGTGAAAT+TGG | 0.318963 | 3_1:+86965150 | Msa0383920:three_prime_UTR |
| TCGTGCTCTGTTGCCGGTCC+TGG | 0.321224 | 3_1:+86958305 | Msa0383920:CDS |
| TCCATTAATCCCTCCAACTT+TGG | 0.322437 | 3_1:+86961585 | Msa0383920:CDS |
| ATATGCACTCACATAGGTTT+TGG | 0.326006 | 3_1:+86962445 | Msa0383920:CDS |
| TCATTAACATCTTCTGGGTT+TGG | 0.326059 | 3_1:-86959213 | None:intergenic |
| CAAGTGTTGCTTCACATAAA+AGG | 0.328036 | 3_1:-86964942 | None:intergenic |
| CAACACATGCATCAATTAAT+GGG | 0.332921 | 3_1:-86958036 | None:intergenic |
| GCGATGATGGAAAACGATTT+CGG | 0.335463 | 3_1:+86962479 | Msa0383920:CDS |
| ATTTACTTGATGAAGCTAAA+AGG | 0.368508 | 3_1:+86962533 | Msa0383920:CDS |
| TGGAGAAACTGGAGAAATTA+GGG | 0.368736 | 3_1:+86961605 | Msa0383920:CDS |
| GTAGAATCGTGCTCTGTTGC+CGG | 0.374591 | 3_1:+86958299 | Msa0383920:CDS |
| GTGCATATTGGATATTCATT+TGG | 0.374710 | 3_1:-86962430 | None:intergenic |
| TCAACGCCTTGGGATTCGTT+TGG | 0.378782 | 3_1:+86960068 | Msa0383920:CDS |
| GTGTGAATACCTGTATAATT+TGG | 0.380982 | 3_1:+86964762 | Msa0383920:CDS |
| TTCTCCAGTTTCTCCAAAGT+TGG | 0.388161 | 3_1:-86961598 | None:intergenic |
| GTGGGTCATAACTTGTAAAC+TGG | 0.389130 | 3_1:-86965003 | None:intergenic |
| TGGGATTCGTTTGGAGGAAA+TGG | 0.393243 | 3_1:+86960077 | Msa0383920:CDS |
| AACAAATTTGCGATGTTAGT+AGG | 0.395490 | 3_1:+86960025 | Msa0383920:CDS |
| CTCGTGACAGAATGGTAATT+TGG | 0.401118 | 3_1:+86964437 | Msa0383920:intron |
| TGATCAGATGCTTAATGATA+AGG | 0.402610 | 3_1:+86963800 | Msa0383920:CDS |
| ACTTCCAATCAAGAGGGTTA+TGG | 0.403068 | 3_1:+86958516 | Msa0383920:CDS |
| AAACCTATGTGAGTGCATAT+TGG | 0.403957 | 3_1:-86962442 | None:intergenic |
| CTCATAAACTGAAAATTTCA+AGG | 0.404515 | 3_1:-86965214 | None:intergenic |
| TGTTCCATTATCAGGAAATC+TGG | 0.404568 | 3_1:+86964137 | Msa0383920:CDS |
| CAGATTCATTAACATCTTCT+GGG | 0.405868 | 3_1:-86959218 | None:intergenic |
| AATGCCTTTGTCAGGTTGTT+GGG | 0.416932 | 3_1:+86964896 | Msa0383920:intron |
| TGCAAGTGTGTCCCCAATAA+TGG | 0.417234 | 3_1:-86958596 | None:intergenic |
| TTTCTGCGGATCAAACATTC+AGG | 0.418149 | 3_1:-86958640 | None:intergenic |
| GAATGCCTTTGTCAGGTTGT+TGG | 0.428174 | 3_1:+86964895 | Msa0383920:intron |
| TTTCGGTGAGTGAGAGAGAG+AGG | 0.437250 | 3_1:-86957684 | None:intergenic |
| ATATTGTCTTATCAAAGAAC+TGG | 0.438276 | 3_1:+86958336 | Msa0383920:CDS |
| TCAACCATAACCCTCTTGAT+TGG | 0.439386 | 3_1:-86958520 | None:intergenic |
| TTACCGATGGTATTGATTCA+TGG | 0.440119 | 3_1:+86958485 | Msa0383920:CDS |
| TATCAGGCCTTTAGGCGTGC+AGG | 0.441463 | 3_1:+86962391 | Msa0383920:intron |
| ACAAGGTCTATCAACGCCTT+GGG | 0.445963 | 3_1:+86960058 | Msa0383920:CDS |
| GATGTTAATGAATCTGATAT+TGG | 0.446312 | 3_1:+86959225 | Msa0383920:CDS |
| AACAAGGTCTATCAACGCCT+TGG | 0.450225 | 3_1:+86960057 | Msa0383920:CDS |
| ATCTAGATAATGCTAAAGAT+TGG | 0.451886 | 3_1:+86962718 | Msa0383920:intron |
| TGAATGACGAAAAGCTTGAT+TGG | 0.453450 | 3_1:+86962247 | Msa0383920:CDS |
| TCAGGTTGTTGGGTCGCCTC+AGG | 0.453632 | 3_1:+86964906 | Msa0383920:intron |
| AATATATATGTTACAGATGT+TGG | 0.453832 | 3_1:+86962270 | Msa0383920:CDS |
| AGATTTCGGCCAAATTATAC+AGG | 0.458703 | 3_1:-86964771 | None:intergenic |
| AGGTATTCACACAACATGTT+TGG | 0.458883 | 3_1:-86964751 | None:intergenic |
| AGAGGAGTAGGGGCTCATTT+GGG | 0.460711 | 3_1:-86957666 | None:intergenic |
| TCTATAAGGCCTCAAAATTG+AGG | 0.463809 | 3_1:+86959796 | Msa0383920:CDS |
| AAGCCACCCTGCACGCCTAA+AGG | 0.464613 | 3_1:-86962398 | None:intergenic |
| ACGCCTTGGGATTCGTTTGG+AGG | 0.464643 | 3_1:+86960071 | Msa0383920:CDS |
| AGACATTGCTTCTATCTCCT+TGG | 0.465394 | 3_1:+86964973 | Msa0383920:CDS |
| CATCAGAGGCAATTGGATAT+GGG | 0.465414 | 3_1:+86962763 | Msa0383920:CDS |
| TTCACAAATCCACGTTCACT+TGG | 0.466361 | 3_1:+86958239 | Msa0383920:CDS |
| GAGAAAACATCAGAGGCAAT+TGG | 0.470928 | 3_1:+86962756 | Msa0383920:CDS |
| ATCTGATATTGGAGATCTAC+AGG | 0.471616 | 3_1:+86959236 | Msa0383920:CDS |
| CATTTAGTGCATAGAAGTGT+AGG | 0.475349 | 3_1:+86965073 | Msa0383920:three_prime_UTR |
| GACAATGGCATCGGATTGAG+TGG | 0.477571 | 3_1:-86958014 | None:intergenic |
| TTCTTTCGCTATATTGGGTG+AGG | 0.477609 | 3_1:-86958548 | None:intergenic |
| TGAGTGAGAGAGAGAGGAGT+AGG | 0.478571 | 3_1:-86957678 | None:intergenic |
| AAATCTCCCTTCATCACAAA+TGG | 0.479562 | 3_1:+86958277 | Msa0383920:CDS |
| CAGAAATCATATCGGTGACT+GGG | 0.481664 | 3_1:+86958657 | Msa0383920:CDS |
| TCCCATGCCGTCCGATACTT+GGG | 0.487455 | 3_1:-86960003 | None:intergenic |
| TCCAGTTTCTCCAAAGTTGG+AGG | 0.488329 | 3_1:-86961595 | None:intergenic |
| CATGAAGACGAGCGTACATT+GGG | 0.490201 | 3_1:+86964468 | Msa0383920:CDS |
| ATTTGTTGTATGCACATGCT+AGG | 0.493285 | 3_1:+86964111 | Msa0383920:CDS |
| AAATGCATGTTGGTCACCTC+AGG | 0.499582 | 3_1:+86958569 | Msa0383920:CDS |
| TGCGAGTGTGAAGAAGCAAT+TGG | 0.502186 | 3_1:+86957955 | Msa0383920:CDS |
| TAAGATTAAAGGGAAGCAAC+AGG | 0.503033 | 3_1:+86958214 | Msa0383920:CDS |
| GCAGAAATCATATCGGTGAC+TGG | 0.505203 | 3_1:+86958656 | Msa0383920:CDS |
| TACCGATGGTATTGATTCAT+GGG | 0.505587 | 3_1:+86958486 | Msa0383920:CDS |
| GAGTGAGAGAGAGAGGAGTA+GGG | 0.508497 | 3_1:-86957677 | None:intergenic |
| ATCCCAAGTATCGGACGGCA+TGG | 0.509954 | 3_1:+86960001 | Msa0383920:CDS |
| AATGGATTGAAGAAGCTCTC+TGG | 0.510485 | 3_1:-86961568 | None:intergenic |
| GATTCTACCATTTGTGATGA+AGG | 0.511863 | 3_1:-86958284 | None:intergenic |
| AAGACAATATTGACAAATCC+AGG | 0.513254 | 3_1:-86958323 | None:intergenic |
| GCAGTCAGTGGTCAAGCTCC+AGG | 0.516493 | 3_1:+86959854 | Msa0383920:CDS |
| AATTGCTTCTTCACACTCGC+AGG | 0.521602 | 3_1:-86957953 | None:intergenic |
| CCAGTTTCTCCAAAGTTGGA+GGG | 0.527284 | 3_1:-86961594 | None:intergenic |
| GGTCTTGTTCTTGGCGATGA+TGG | 0.528164 | 3_1:+86962466 | Msa0383920:CDS |
| TCATAAACTGAAAATTTCAA+GGG | 0.529613 | 3_1:-86965213 | None:intergenic |
| TCAAACCTGCTGATTATCAA+TGG | 0.530418 | 3_1:+86958071 | Msa0383920:CDS |
| GCTCGTGTGATATTTGTTGA+GGG | 0.532483 | 3_1:+86961649 | Msa0383920:CDS |
| GCATGAAGACGAGCGTACAT+TGG | 0.535587 | 3_1:+86964467 | Msa0383920:CDS |
| TGTGCATTTAACTTAAAAGC+AGG | 0.536730 | 3_1:-86959831 | None:intergenic |
| TGAACTCCTCATTGAGATGG+TGG | 0.537786 | 3_1:-86965022 | None:intergenic |
| GGGGAGGCTAGGCTAGGTAG+GGG | 0.538590 | 3_1:-86957709 | None:intergenic |
| ATATACCATTGATAATCAGC+AGG | 0.547065 | 3_1:-86958076 | None:intergenic |
| TGCGGATCAAACATTCAGGC+TGG | 0.551051 | 3_1:-86958636 | None:intergenic |
| ATTCTACCATTTGTGATGAA+GGG | 0.556434 | 3_1:-86958283 | None:intergenic |
| TTGATCCGCAGAAATCATAT+CGG | 0.558264 | 3_1:+86958649 | Msa0383920:CDS |
| TATCGGTGACTGGGGCACTC+AGG | 0.561550 | 3_1:+86958666 | Msa0383920:CDS |
| ATCAGGCCTTTAGGCGTGCA+GGG | 0.563275 | 3_1:+86962392 | Msa0383920:intron |
| TCCCAAGTATCGGACGGCAT+GGG | 0.567055 | 3_1:+86960002 | Msa0383920:CDS |
| TGCTCGTGTGATATTTGTTG+AGG | 0.567259 | 3_1:+86961648 | Msa0383920:CDS |
| GAAGGAGAACACAATGGAGG+GGG | 0.567732 | 3_1:-86957728 | None:intergenic |
| TCTTGAACTCCTCATTGAGA+TGG | 0.570249 | 3_1:-86965025 | None:intergenic |
| TAGAAGGAGAACACAATGGA+GGG | 0.572947 | 3_1:-86957730 | None:intergenic |
| AACACTGACTCTCGCAAGAG+AGG | 0.573520 | 3_1:-86957785 | None:intergenic |
| ACAGAATGGTAATTTGGTGT+TGG | 0.573671 | 3_1:+86964443 | Msa0383920:intron |
| GATGAAGAAACTCAGAGAGA+GGG | 0.584408 | 3_1:-86957763 | None:intergenic |
| GCGTGCAGGGTGGCTTCCAA+AGG | 0.588234 | 3_1:+86962405 | Msa0383920:CDS |
| CAACTGATCTAGCATCACTT+CGG | 0.588528 | 3_1:+86961725 | Msa0383920:CDS |
| ATCAAAGAACTGGATAGCAC+AGG | 0.594429 | 3_1:+86958346 | Msa0383920:CDS |
| AATTAATGGGACAATGGCAT+CGG | 0.594515 | 3_1:-86958023 | None:intergenic |
| ATCAGAGGCAATTGGATATG+GGG | 0.594771 | 3_1:+86962764 | Msa0383920:CDS |
| GGTTTGGAAATTTCTCAAAG+AGG | 0.596587 | 3_1:-86959197 | None:intergenic |
| TATCCAATATGCACTCACAT+AGG | 0.597532 | 3_1:+86962439 | Msa0383920:CDS |
| TCATTTACTGCAATTTACTG+AGG | 0.600598 | 3_1:+86964494 | Msa0383920:CDS |
| AAATCCACGTTCACTTGGAG+AGG | 0.601303 | 3_1:+86958244 | Msa0383920:CDS |
| TGCATCAATTAATGGGACAA+TGG | 0.604895 | 3_1:-86958029 | None:intergenic |
| AGATAATGCTAAAGATTGGA+CGG | 0.605541 | 3_1:+86962722 | Msa0383920:intron |
| ATGAACATGGTGGATATGGA+TGG | 0.606198 | 3_1:-86957828 | None:intergenic |
| AGGGAGGGGATCCCAAGTAT+CGG | 0.609503 | 3_1:+86959992 | Msa0383920:intron |
| TGCCCATGAATCAATACCAT+CGG | 0.610478 | 3_1:-86958488 | None:intergenic |
| AATATTGACAAATCCAGGAC+CGG | 0.612733 | 3_1:-86958318 | None:intergenic |
| TGTAAACTGGATCAATTCCA+AGG | 0.613591 | 3_1:-86964990 | None:intergenic |
| GGATGAAGAAACTCAGAGAG+AGG | 0.617059 | 3_1:-86957764 | None:intergenic |
| CTAATTGCTGTGAAAAGAGA+TGG | 0.619319 | 3_1:+86961685 | Msa0383920:CDS |
| ATGAAGAAACTCAGAGAGAG+GGG | 0.620742 | 3_1:-86957762 | None:intergenic |
| AGTGAGAGAGAGAGGAGTAG+GGG | 0.626616 | 3_1:-86957676 | None:intergenic |
| CTAGAAGGAGAACACAATGG+AGG | 0.626755 | 3_1:-86957731 | None:intergenic |
| ACCCTCTTGATTGGAAGTCG+AGG | 0.627107 | 3_1:-86958511 | None:intergenic |
| CACCTCGACTTCCAATCAAG+AGG | 0.630058 | 3_1:+86958509 | Msa0383920:CDS |
| ATGCCCTCTCCAAGTGAACG+TGG | 0.632374 | 3_1:-86958248 | None:intergenic |
| AGAAGGAGAACACAATGGAG+GGG | 0.636697 | 3_1:-86957729 | None:intergenic |
| GAACTCCTCATTGAGATGGT+GGG | 0.636709 | 3_1:-86965021 | None:intergenic |
| AGAGATTGAGAAAACATCAG+AGG | 0.641877 | 3_1:+86962749 | Msa0383920:CDS |
| GCAATTGGCCAAATTGTTTG+GGG | 0.643100 | 3_1:+86957970 | Msa0383920:CDS |
| ATAGCGAAAGAAATGCATGT+TGG | 0.644505 | 3_1:+86958559 | Msa0383920:CDS |
| ACCTCGACTTCCAATCAAGA+GGG | 0.646268 | 3_1:+86958510 | Msa0383920:CDS |
| AGGGGATCCCAAGTATCGGA+CGG | 0.652831 | 3_1:+86959996 | Msa0383920:CDS |
| AAAGTTGCTCTTCTTGAACG+TGG | 0.655376 | 3_1:+86962562 | Msa0383920:CDS |
| GTTAAATGCACAGCAGTCAG+TGG | 0.656532 | 3_1:+86959842 | Msa0383920:CDS |
| TTTCTAGAAGGAGAACACAA+TGG | 0.659831 | 3_1:-86957734 | None:intergenic |
| ATGTTACAGATGTTGGTCAG+TGG | 0.661892 | 3_1:+86962277 | Msa0383920:CDS |
| CATAAACTGAAAATTTCAAG+GGG | 0.664459 | 3_1:-86965212 | None:intergenic |
| TTTCCTCCAAACGAATCCCA+AGG | 0.665559 | 3_1:-86960074 | None:intergenic |
| TAGTAGGACTGAATTTAACA+AGG | 0.668429 | 3_1:+86960041 | Msa0383920:CDS |
| CCTCAGGTCAACCATTATTG+GGG | 0.671050 | 3_1:+86958585 | Msa0383920:CDS |
| ATTGCTGTGAAAAGAGATGG+TGG | 0.673425 | 3_1:+86961688 | Msa0383920:CDS |
| AGGCCTTTAGGCGTGCAGGG+TGG | 0.674553 | 3_1:+86962395 | Msa0383920:intron |
| AGAAATCATATCGGTGACTG+GGG | 0.675252 | 3_1:+86958658 | Msa0383920:CDS |
| AGTCACCGATATGATTTCTG+CGG | 0.678006 | 3_1:-86958654 | None:intergenic |
| GGGCTGATTGAAGAAAATGA+TGG | 0.678059 | 3_1:+86961625 | Msa0383920:CDS |
| AATCCACGTTCACTTGGAGA+GGG | 0.679916 | 3_1:+86958245 | Msa0383920:CDS |
| TTACAGAGGATGCTTACCGA+TGG | 0.686104 | 3_1:+86958472 | Msa0383920:CDS |
| ACAATGGCATCGGATTGAGT+GGG | 0.688209 | 3_1:-86958013 | None:intergenic |
| TGATGAACTTACAATGAACA+TGG | 0.690620 | 3_1:-86957841 | None:intergenic |
| CCCCAATAATGGTTGACCTG+AGG | 0.699236 | 3_1:-86958585 | None:intergenic |
| TGCATACAACAAATAAACAG+CGG | 0.707344 | 3_1:-86964102 | None:intergenic |
| TCCTCCTGCAGAGATTACAG+AGG | 0.712412 | 3_1:+86958458 | Msa0383920:intron |
| AGGAGTCTACTAGTTTCCTG+AGG | 0.715802 | 3_1:-86964922 | None:intergenic |
| TATGACCCACCATCTCAATG+AGG | 0.718515 | 3_1:+86965016 | Msa0383920:exon |
| TAATGCTAAAGATTGGACGG+AGG | 0.726813 | 3_1:+86962725 | Msa0383920:CDS |
| TGAACTTACAATGAACATGG+TGG | 0.735145 | 3_1:-86957838 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTATTTTTATTATTT+CGG | + | chr3_1:86957891-86957910 | Msa0383920:intron | 0.0% |
| !!! | TTATTATTTTTATTATTTCG+GGG | + | chr3_1:86957893-86957912 | Msa0383920:intron | 10.0% |
| !! | AATTTAAAAAACAAATAAGT+GGG | - | chr3_1:86958152-86958171 | None:intergenic | 10.0% |
| !! | ATCTTTCTAATTAAAAAAAT+GGG | - | chr3_1:86959568-86959587 | None:intergenic | 10.0% |
| !!! | TAGTTTAGTTATATTTTTTT+TGG | + | chr3_1:86961749-86961768 | Msa0383920:intron | 10.0% |
| !! | AATAATAAATGTATTTAGTT+TGG | + | chr3_1:86963272-86963291 | Msa0383920:intron | 10.0% |
| !!! | ATAATAAATGTATTTAGTTT+GGG | + | chr3_1:86963273-86963292 | Msa0383920:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963293-86963312 | Msa0383920:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963293-86963312 | Msa0383920:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963293-86963312 | Msa0383920:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963293-86963312 | Msa0383920:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963293-86963312 | Msa0383920:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963293-86963312 | Msa0383920:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+AGG | + | chr3_1:86963293-86963312 | Msa0383920:intron | 100.0% |
| !!! | TAAGTTGAAATGATTAATTT+AGG | - | chr3_1:86957873-86957892 | None:intergenic | 15.0% |
| !! | GAATTTAAAAAACAAATAAG+TGG | - | chr3_1:86958153-86958172 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTCATTCATTCT+TGG | + | chr3_1:86958162-86958181 | Msa0383920:intron | 15.0% |
| !!! | AAATTAAATGATTTTTGCAA+AGG | - | chr3_1:86958882-86958901 | None:intergenic | 15.0% |
| !!! | ATTTAATTTCTAGTTGTATT+TGG | + | chr3_1:86958893-86958912 | Msa0383920:intron | 15.0% |
| !!! | TTTAATTTCTAGTTGTATTT+GGG | + | chr3_1:86958894-86958913 | Msa0383920:intron | 15.0% |
| !!! | ATAAGCAAAAATTGTTATTT+TGG | - | chr3_1:86959059-86959078 | None:intergenic | 15.0% |
| !!! | TAGGAATTAATTTGTTATAA+AGG | + | chr3_1:86959431-86959450 | Msa0383920:intron | 15.0% |
| !! | CATCTTTCTAATTAAAAAAA+TGG | - | chr3_1:86959569-86959588 | None:intergenic | 15.0% |
| !!! | TTTACTTATTCTGAAATTAT+TGG | + | chr3_1:86959751-86959770 | Msa0383920:intron | 15.0% |
| !! | AAAGCATAAATTAAAAGAAA+AGG | - | chr3_1:86960153-86960172 | None:intergenic | 15.0% |
| !!! | CTTTTTTCTAAAAATGAATA+CGG | - | chr3_1:86960450-86960469 | None:intergenic | 15.0% |
| !! | TAGACATACAATTTAATAAA+AGG | - | chr3_1:86960616-86960635 | None:intergenic | 15.0% |
| !! | TAGATAGAAAATGTTATAAT+TGG | - | chr3_1:86961177-86961196 | None:intergenic | 15.0% |
| !! | ACAATTAGTAGTATTAATTA+TGG | + | chr3_1:86963235-86963254 | Msa0383920:intron | 15.0% |
| !!! | TAATAAATGTATTTAGTTTG+GGG | + | chr3_1:86963274-86963293 | Msa0383920:intron | 15.0% |
| !! | ATGTATTTAGTAATTTGAAA+TGG | + | chr3_1:86963466-86963485 | Msa0383920:intron | 15.0% |
| !!! | AAAAATGTACTAACTTTTTA+AGG | + | chr3_1:86965291-86965310 | Msa0383920:three_prime_UTR | 15.0% |
| !! | TGAAATAATGGTGATATTAT+AGG | + | chr3_1:86957919-86957938 | Msa0383920:intron | 20.0% |
| !!! | TTCATTCAATTTCTATTTCT+AGG | + | chr3_1:86958384-86958403 | Msa0383920:intron | 20.0% |
| !! | ATAAACATAATGTACTTTAG+AGG | - | chr3_1:86958701-86958720 | None:intergenic | 20.0% |
| !! | ATAGCATAAAAAATCTAACT+CGG | - | chr3_1:86958725-86958744 | None:intergenic | 20.0% |
| !!! | ATTTGTAACCATTTTTCTTT+GGG | + | chr3_1:86958814-86958833 | Msa0383920:intron | 20.0% |
| !!! | ATCAATTACTTATCTTTTCA+AGG | - | chr3_1:86959513-86959532 | None:intergenic | 20.0% |
| !!! | TTTTAATTAGAAAGATGTCA+AGG | + | chr3_1:86959572-86959591 | Msa0383920:intron | 20.0% |
| !! | CTAATAATAACTAGTATCTA+TGG | - | chr3_1:86959635-86959654 | None:intergenic | 20.0% |
| !!! | CTTTTAATTTATGCTTTGTT+TGG | + | chr3_1:86960156-86960175 | Msa0383920:intron | 20.0% |
| !!! | GAGATGATTTTTTAATTGTT+TGG | + | chr3_1:86960235-86960254 | Msa0383920:intron | 20.0% |
| !! | ATATAAAATTGATAAGACAG+AGG | + | chr3_1:86960498-86960517 | Msa0383920:intron | 20.0% |
| !! | AAAGTGAATGGATAAATAAT+AGG | - | chr3_1:86960765-86960784 | None:intergenic | 20.0% |
| !! | AACAAAACGAAACATATATA+AGG | - | chr3_1:86961089-86961108 | None:intergenic | 20.0% |
| !!! | TAGTCAAAATTAGTTTATCT+TGG | + | chr3_1:86961826-86961845 | Msa0383920:intron | 20.0% |
| !! | AAATAGAAGATAAACTGTTT+GGG | + | chr3_1:86962190-86962209 | Msa0383920:intron | 20.0% |
| !! | AATATATATGTTACAGATGT+TGG | + | chr3_1:86962270-86962289 | Msa0383920:CDS | 20.0% |
| !! | GAAGAAATAAAAATTGCAAT+AGG | - | chr3_1:86962602-86962621 | None:intergenic | 20.0% |
| !! | CATACTTTATTGAGTTAAAT+TGG | + | chr3_1:86962873-86962892 | Msa0383920:intron | 20.0% |
| !!! | ACTTTTAAAATTCAGTAAAC+AGG | - | chr3_1:86962924-86962943 | None:intergenic | 20.0% |
| !! | TATATACTTTCTTTACTTTG+AGG | + | chr3_1:86962990-86963009 | Msa0383920:intron | 20.0% |
| !! | TATCTAATTAAACTAATTGC+CGG | - | chr3_1:86963064-86963083 | None:intergenic | 20.0% |
| !!! | TTTTTCAATACATGTGAATT+TGG | - | chr3_1:86963119-86963138 | None:intergenic | 20.0% |
| !! | TCACATGTATTGAAAAAAAT+AGG | + | chr3_1:86963122-86963141 | Msa0383920:intron | 20.0% |
| !!! | AATAAATGTATTTAGTTTGG+GGG | + | chr3_1:86963275-86963294 | Msa0383920:intron | 20.0% |
| !! | TGAAATGGAGATTATATTTA+AGG | + | chr3_1:86963481-86963500 | Msa0383920:intron | 20.0% |
| !!! | ATACTTTTTTCTTTCAAAGA+AGG | + | chr3_1:86963504-86963523 | Msa0383920:intron | 20.0% |
| !! | ATCTATGATATTACATTAGT+AGG | - | chr3_1:86964044-86964063 | None:intergenic | 20.0% |
| !! | ATACATATATAATAGTATGC+TGG | + | chr3_1:86964378-86964397 | Msa0383920:intron | 20.0% |
| !! | TTATATTATTAAGCAGCTAT+AGG | + | chr3_1:86964621-86964640 | Msa0383920:intron | 20.0% |
| !! | AAATTTCTTTGTGAAGATTT+CGG | - | chr3_1:86964788-86964807 | None:intergenic | 20.0% |
| !! | TCATAAACTGAAAATTTCAA+GGG | - | chr3_1:86965216-86965235 | None:intergenic | 20.0% |
| !! | AGTCTTTTTGCTAAGATTAA+AGG | + | chr3_1:86958203-86958222 | Msa0383920:CDS | 25.0% |
| !! | GTCTTTTTGCTAAGATTAAA+GGG | + | chr3_1:86958204-86958223 | Msa0383920:CDS | 25.0% |
| ! | ATATTGTCTTATCAAAGAAC+TGG | + | chr3_1:86958336-86958355 | Msa0383920:CDS | 25.0% |
| !!! | CATTTGTAACCATTTTTCTT+TGG | + | chr3_1:86958813-86958832 | Msa0383920:intron | 25.0% |
| ! | AATCATATCCCAAAGAAAAA+TGG | - | chr3_1:86958825-86958844 | None:intergenic | 25.0% |
| !! | GTGTAAACTATTTTCTTTGT+AGG | - | chr3_1:86959015-86959034 | None:intergenic | 25.0% |
| !!! | AGCAAAAATTGTTATTTTGG+TGG | - | chr3_1:86959056-86959075 | None:intergenic | 25.0% |
| !! | TATTACGAAGAATCTCATTT+TGG | + | chr3_1:86959112-86959131 | Msa0383920:intron | 25.0% |
| ! | GATGTTAATGAATCTGATAT+TGG | + | chr3_1:86959225-86959244 | Msa0383920:CDS | 25.0% |
| !!! | CATTTTTAGATATCTAGTCT+AGG | + | chr3_1:86959412-86959431 | Msa0383920:intron | 25.0% |
| !!! | TATTATCTATTGAGGTATTG+TGG | - | chr3_1:86959457-86959476 | None:intergenic | 25.0% |
| ! | GTAGCTTATATTATCTATTG+AGG | - | chr3_1:86959465-86959484 | None:intergenic | 25.0% |
| !!! | AAGTAATTGATTTTGTTGAC+AGG | + | chr3_1:86959522-86959541 | Msa0383920:intron | 25.0% |
| !!! | TGATTGTTATTTAGCTTTGA+TGG | + | chr3_1:86959720-86959739 | Msa0383920:intron | 25.0% |
| !!! | TATTCTGAAATTATTGGAGT+TGG | + | chr3_1:86959757-86959776 | Msa0383920:intron | 25.0% |
| !!! | ATTCTGAAATTATTGGAGTT+GGG | + | chr3_1:86959758-86959777 | Msa0383920:intron | 25.0% |
| ! | AACTTGAAGTAAAATTTACC+TGG | - | chr3_1:86959875-86959894 | None:intergenic | 25.0% |
| ! | GTGAAAGTAAAGAATGTAAA+AGG | + | chr3_1:86960192-86960211 | Msa0383920:intron | 25.0% |
| !!! | ATCTTCTATTTTTTATGCAC+GGG | - | chr3_1:86960325-86960344 | None:intergenic | 25.0% |
| !!! | CATCTTCTATTTTTTATGCA+CGG | - | chr3_1:86960326-86960345 | None:intergenic | 25.0% |
| ! | ATAATAAATGCTACAAGGAA+AGG | + | chr3_1:86960580-86960599 | Msa0383920:intron | 25.0% |
| ! | AATTTAATAAAAGGACAGAC+TGG | - | chr3_1:86960607-86960626 | None:intergenic | 25.0% |
| ! | TGGAAAGTTTATAGAAAAGT+GGG | - | chr3_1:86960741-86960760 | None:intergenic | 25.0% |
| ! | ATGGAAAGTTTATAGAAAAG+TGG | - | chr3_1:86960742-86960761 | None:intergenic | 25.0% |
| ! | TGAATGGATAAATAATAGGA+TGG | - | chr3_1:86960761-86960780 | None:intergenic | 25.0% |
| !!! | TAAGACATTGTTTGTTTCTA+GGG | - | chr3_1:86960788-86960807 | None:intergenic | 25.0% |
| ! | TAGAAACAAACAATGTCTTA+GGG | + | chr3_1:86960788-86960807 | Msa0383920:intron | 25.0% |
| ! | AAAACGAAACATATATAAGG+AGG | - | chr3_1:86961086-86961105 | None:intergenic | 25.0% |
| ! | GTGTAGCAACAAAAAAAAAT+TGG | + | chr3_1:86961393-86961412 | Msa0383920:intron | 25.0% |
| !!! | ATGTTTTACTTTGTACTGAT+TGG | + | chr3_1:86961527-86961546 | Msa0383920:intron | 25.0% |
| !!! | GTACTGATTGGTTATATATT+TGG | + | chr3_1:86961539-86961558 | Msa0383920:intron | 25.0% |
| !! | TAATAAGAAGAGTATGTGAT+AGG | + | chr3_1:86961898-86961917 | Msa0383920:intron | 25.0% |
| ! | ACCAAGCATTTAGATTTAAT+TGG | + | chr3_1:86961998-86962017 | Msa0383920:intron | 25.0% |
| ! | ACCAATTAAATCTAAATGCT+TGG | - | chr3_1:86962002-86962021 | None:intergenic | 25.0% |
| !! | ACTGTATTTTCTTGAAAAGT+TGG | + | chr3_1:86962118-86962137 | Msa0383920:intron | 25.0% |
| ! | GAAATAGAAGATAAACTGTT+TGG | + | chr3_1:86962189-86962208 | Msa0383920:intron | 25.0% |
| !!! | ACATTTTGACATGCTTTTTA+AGG | + | chr3_1:86962302-86962321 | Msa0383920:CDS | 25.0% |
| ! | ATTTACTTGATGAAGCTAAA+AGG | + | chr3_1:86962533-86962552 | Msa0383920:CDS | 25.0% |
| ! | TAACTTCATTTCTTTGATTC+TGG | - | chr3_1:86962636-86962655 | None:intergenic | 25.0% |
| ! | ATCTAGATAATGCTAAAGAT+TGG | + | chr3_1:86962718-86962737 | Msa0383920:intron | 25.0% |
| ! | TAAAGCTAATTACATATTGC+TGG | - | chr3_1:86962846-86962865 | None:intergenic | 25.0% |
| !! | GTTAAACAAGATTTTCTAAC+CGG | + | chr3_1:86963042-86963061 | Msa0383920:intron | 25.0% |
| !!! | ATAAATGTATTTAGTTTGGG+GGG | + | chr3_1:86963276-86963295 | Msa0383920:intron | 25.0% |
| ! | TTTCAAAGAAGGCTTAAATT+TGG | + | chr3_1:86963515-86963534 | Msa0383920:intron | 25.0% |
| ! | TTCAAAGAAGGCTTAAATTT+GGG | + | chr3_1:86963516-86963535 | Msa0383920:intron | 25.0% |
| ! | AAAAAGCAATCCTGATAAAT+GGG | - | chr3_1:86963606-86963625 | None:intergenic | 25.0% |
| !! | ATAAATATTTTCTGTGAGAG+GGG | - | chr3_1:86963914-86963933 | None:intergenic | 25.0% |
| !! | CATAAATATTTTCTGTGAGA+GGG | - | chr3_1:86963915-86963934 | None:intergenic | 25.0% |
| !! | TCATAAATATTTTCTGTGAG+AGG | - | chr3_1:86963916-86963935 | None:intergenic | 25.0% |
| ! | ATTACATTAGTAGGTTTCAT+GGG | - | chr3_1:86964035-86964054 | None:intergenic | 25.0% |
| ! | TATTACATTAGTAGGTTTCA+TGG | - | chr3_1:86964036-86964055 | None:intergenic | 25.0% |
| ! | AGACATAGAAGAACTAAAAA+AGG | + | chr3_1:86964163-86964182 | Msa0383920:CDS | 25.0% |
| ! | TGTGATGACATTAGAATTAT+TGG | + | chr3_1:86964203-86964222 | Msa0383920:intron | 25.0% |
| ! | AACATATATGTATTGTACCT+AGG | + | chr3_1:86964265-86964284 | Msa0383920:intron | 25.0% |
| !!! | CAGTTTTTTCTTAAAGAAGA+TGG | - | chr3_1:86964596-86964615 | None:intergenic | 25.0% |
| ! | GTAATATATCTATATCGTCA+CGG | - | chr3_1:86964656-86964675 | None:intergenic | 25.0% |
| !!! | TTTTATCTTTCAGGTTTTTG+TGG | + | chr3_1:86964708-86964727 | Msa0383920:intron | 25.0% |
| !!! | GAAATTTTATTCTAGTTGTC+AGG | + | chr3_1:86964801-86964820 | Msa0383920:CDS | 25.0% |
| ! | ACAGAAAATAGAAATAGTGA+GGG | - | chr3_1:86964865-86964884 | None:intergenic | 25.0% |
| ! | TACAAAAAACAAAACAGAAG+AGG | - | chr3_1:86965136-86965155 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTTTTGTATTCCA+AGG | + | chr3_1:86965141-86965160 | Msa0383920:three_prime_UTR | 25.0% |
| !! | CTATACTAATTTTACTGACA+AGG | + | chr3_1:86965189-86965208 | Msa0383920:three_prime_UTR | 25.0% |
| ! | CATAAACTGAAAATTTCAAG+GGG | - | chr3_1:86965215-86965234 | None:intergenic | 25.0% |
| ! | CTCATAAACTGAAAATTTCA+AGG | - | chr3_1:86965217-86965236 | None:intergenic | 25.0% |
| !! | CTTGAAATTTTCAGTTTATG+AGG | + | chr3_1:86965215-86965234 | Msa0383920:three_prime_UTR | 25.0% |
| TGATGAACTTACAATGAACA+TGG | - | chr3_1:86957844-86957863 | None:intergenic | 30.0% | |
| ATTTCGGGGTAATGAAATAA+TGG | + | chr3_1:86957907-86957926 | Msa0383920:intron | 30.0% | |
| CAACACATGCATCAATTAAT+GGG | - | chr3_1:86958039-86958058 | None:intergenic | 30.0% | |
| ! | ATATACCATTGATAATCAGC+AGG | - | chr3_1:86958079-86958098 | None:intergenic | 30.0% |
| AAAACAAATAAGTGGGTGTT+TGG | - | chr3_1:86958145-86958164 | None:intergenic | 30.0% | |
| ATTCTACCATTTGTGATGAA+GGG | - | chr3_1:86958286-86958305 | None:intergenic | 30.0% | |
| AAGACAATATTGACAAATCC+AGG | - | chr3_1:86958326-86958345 | None:intergenic | 30.0% | |
| TGCATTTCTTTCGCTATATT+GGG | - | chr3_1:86958556-86958575 | None:intergenic | 30.0% | |
| ATGCATTTCTTTCGCTATAT+TGG | - | chr3_1:86958557-86958576 | None:intergenic | 30.0% | |
| !! | CTTCGTTTAATTTGGATGAA+TGG | - | chr3_1:86958975-86958994 | None:intergenic | 30.0% |
| ! | AAACTATTTTCTTTGTAGGC+AGG | - | chr3_1:86959011-86959030 | None:intergenic | 30.0% |
| CAGATTCATTAACATCTTCT+GGG | - | chr3_1:86959221-86959240 | None:intergenic | 30.0% | |
| TCAGATTCATTAACATCTTC+TGG | - | chr3_1:86959222-86959241 | None:intergenic | 30.0% | |
| ! | AACTTCATACCAGTTTTCAT+AGG | + | chr3_1:86959279-86959298 | Msa0383920:intron | 30.0% |
| GTAGGTGTTTATTCATATGT+TGG | + | chr3_1:86959301-86959320 | Msa0383920:intron | 30.0% | |
| GTGTTTATTCATATGTTGGT+CGG | + | chr3_1:86959305-86959324 | Msa0383920:intron | 30.0% | |
| !! | GAACTCTGAAATAAAGGTTA+TGG | + | chr3_1:86959598-86959617 | Msa0383920:intron | 30.0% |
| TAGTATCTATGGTCAAACAT+AGG | - | chr3_1:86959624-86959643 | None:intergenic | 30.0% | |
| !! | GCATTTTTAGGCATTCTATA+AGG | + | chr3_1:86959782-86959801 | Msa0383920:intron | 30.0% |
| ! | ACTATCAAACCTCAATTTTG+AGG | - | chr3_1:86959808-86959827 | None:intergenic | 30.0% |
| ! | TGTGCATTTAACTTAAAAGC+AGG | - | chr3_1:86959834-86959853 | None:intergenic | 30.0% |
| AACAAATTTGCGATGTTAGT+AGG | + | chr3_1:86960025-86960044 | Msa0383920:CDS | 30.0% | |
| TAGTAGGACTGAATTTAACA+AGG | + | chr3_1:86960041-86960060 | Msa0383920:CDS | 30.0% | |
| GTAGCATTTATTATGCTTCA+CGG | - | chr3_1:86960574-86960593 | None:intergenic | 30.0% | |
| GAAGCATAATAAATGCTACA+AGG | + | chr3_1:86960575-86960594 | Msa0383920:intron | 30.0% | |
| ACAAATCAGTAAGGAAATCA+TGG | - | chr3_1:86960641-86960660 | None:intergenic | 30.0% | |
| ! | CTAAGACATTGTTTGTTTCT+AGG | - | chr3_1:86960789-86960808 | None:intergenic | 30.0% |
| CTAGAAACAAACAATGTCTT+AGG | + | chr3_1:86960787-86960806 | Msa0383920:intron | 30.0% | |
| TAACTCACATATAAGCTTGT+TGG | + | chr3_1:86961281-86961300 | Msa0383920:intron | 30.0% | |
| !! | TACCAGATTGATTTTGTGAT+AGG | + | chr3_1:86962026-86962045 | Msa0383920:intron | 30.0% |
| ATCCTATCACAAAATCAATC+TGG | - | chr3_1:86962031-86962050 | None:intergenic | 30.0% | |
| ! | TTTTTATCCGAGTATGTAAC+AGG | + | chr3_1:86962167-86962186 | Msa0383920:intron | 30.0% |
| TCTATTTCCTGTTACATACT+CGG | - | chr3_1:86962177-86962196 | None:intergenic | 30.0% | |
| GTGCATATTGGATATTCATT+TGG | - | chr3_1:86962433-86962452 | None:intergenic | 30.0% | |
| TAAAAATTGCAATAGGCAAC+TGG | - | chr3_1:86962595-86962614 | None:intergenic | 30.0% | |
| GATCTATGAAACTATCAGAT+TGG | + | chr3_1:86962668-86962687 | Msa0383920:intron | 30.0% | |
| TATGAAACTATCAGATTGGA+CGG | + | chr3_1:86962672-86962691 | Msa0383920:intron | 30.0% | |
| AGATGAACATAGGATTTAGA+AGG | - | chr3_1:86962702-86962721 | None:intergenic | 30.0% | |
| AGCATTATCTAGATGAACAT+AGG | - | chr3_1:86962712-86962731 | None:intergenic | 30.0% | |
| AGATAATGCTAAAGATTGGA+CGG | + | chr3_1:86962722-86962741 | Msa0383920:intron | 30.0% | |
| AACTAGTAAGACAATACATC+TGG | - | chr3_1:86962901-86962920 | None:intergenic | 30.0% | |
| GCAAAAGGAGCTTATAATAA+GGG | - | chr3_1:86963097-86963116 | None:intergenic | 30.0% | |
| ATACATGTGAATTTGGCAAA+AGG | - | chr3_1:86963112-86963131 | None:intergenic | 30.0% | |
| TCTACACAAAATAGACACAT+TGG | - | chr3_1:86963156-86963175 | None:intergenic | 30.0% | |
| ! | AATGTGTCTATTTTGTGTAG+AGG | + | chr3_1:86963155-86963174 | Msa0383920:intron | 30.0% |
| !!! | TCATATACGAAGGGTATTTT+AGG | - | chr3_1:86963183-86963202 | None:intergenic | 30.0% |
| !! | TAAATGTATTTAGTTTGGGG+GGG | + | chr3_1:86963277-86963296 | Msa0383920:intron | 30.0% |
| TCAAAGAAGGCTTAAATTTG+GGG | + | chr3_1:86963517-86963536 | Msa0383920:intron | 30.0% | |
| AAAAGCAATCCTGATAAATG+GGG | - | chr3_1:86963605-86963624 | None:intergenic | 30.0% | |
| CAAAAAGCAATCCTGATAAA+TGG | - | chr3_1:86963607-86963626 | None:intergenic | 30.0% | |
| ! | AATGACTCAACATATGGTTT+TGG | + | chr3_1:86963632-86963651 | Msa0383920:intron | 30.0% |
| TGATCAGATGCTTAATGATA+AGG | + | chr3_1:86963800-86963819 | Msa0383920:CDS | 30.0% | |
| GACAGCAATTGTAAATCAAA+AGG | - | chr3_1:86963962-86963981 | None:intergenic | 30.0% | |
| TTACATTAGTAGGTTTCATG+GGG | - | chr3_1:86964034-86964053 | None:intergenic | 30.0% | |
| TGCATACAACAAATAAACAG+CGG | - | chr3_1:86964105-86964124 | None:intergenic | 30.0% | |
| TTTACCAGATTTCCTGATAA+TGG | - | chr3_1:86964144-86964163 | None:intergenic | 30.0% | |
| ATGATCTACTCATAAAACCT+AGG | - | chr3_1:86964285-86964304 | None:intergenic | 30.0% | |
| !! | TAGGTTTTATGAGTAGATCA+TGG | + | chr3_1:86964284-86964303 | Msa0383920:intron | 30.0% |
| TCATTTACTGCAATTTACTG+AGG | + | chr3_1:86964494-86964513 | Msa0383920:CDS | 30.0% | |
| ! | AGTGTTTTACTTTGTCAATC+TGG | + | chr3_1:86964568-86964587 | Msa0383920:intron | 30.0% |
| ! | GTGTTTTACTTTGTCAATCT+GGG | + | chr3_1:86964569-86964588 | Msa0383920:intron | 30.0% |
| !!! | CGTGAGTTTTTTTATCTTTC+AGG | + | chr3_1:86964699-86964718 | Msa0383920:intron | 30.0% |
| GTGTGAATACCTGTATAATT+TGG | + | chr3_1:86964762-86964781 | Msa0383920:CDS | 30.0% | |
| CACAGAAAATAGAAATAGTG+AGG | - | chr3_1:86964866-86964885 | None:intergenic | 30.0% | |
| ! | TTAATTTGAATGCCTTTGTC+AGG | + | chr3_1:86964888-86964907 | Msa0383920:intron | 30.0% |
| !!! | GAGTTCAAGATCAAGTTTTT+TGG | + | chr3_1:86965038-86965057 | Msa0383920:three_prime_UTR | 30.0% |
| TTTGTATTCCAAGGTGAAAT+TGG | + | chr3_1:86965150-86965169 | Msa0383920:three_prime_UTR | 30.0% | |
| ! | ACTATTTTCCAATTTCACCT+TGG | - | chr3_1:86965161-86965180 | None:intergenic | 30.0% |
| ! | TTTCTAGAAGGAGAACACAA+TGG | - | chr3_1:86957737-86957756 | None:intergenic | 35.0% |
| !! | TACAATGAACATGGTGGATA+TGG | - | chr3_1:86957835-86957854 | None:intergenic | 35.0% |
| TGAACTTACAATGAACATGG+TGG | - | chr3_1:86957841-86957860 | None:intergenic | 35.0% | |
| AAGCAATTGGCCAAATTGTT+TGG | + | chr3_1:86957968-86957987 | Msa0383920:CDS | 35.0% | |
| AGCAATTGGCCAAATTGTTT+GGG | + | chr3_1:86957969-86957988 | Msa0383920:CDS | 35.0% | |
| AATTAATGGGACAATGGCAT+CGG | - | chr3_1:86958026-86958045 | None:intergenic | 35.0% | |
| TGCATCAATTAATGGGACAA+TGG | - | chr3_1:86958032-86958051 | None:intergenic | 35.0% | |
| GCAACACATGCATCAATTAA+TGG | - | chr3_1:86958040-86958059 | None:intergenic | 35.0% | |
| GATGCATGTGTTGCAAAAAA+TGG | + | chr3_1:86958046-86958065 | Msa0383920:CDS | 35.0% | |
| ! | TCAAACCTGCTGATTATCAA+TGG | + | chr3_1:86958071-86958090 | Msa0383920:CDS | 35.0% |
| TAAGATTAAAGGGAAGCAAC+AGG | + | chr3_1:86958214-86958233 | Msa0383920:CDS | 35.0% | |
| AAATCTCCCTTCATCACAAA+TGG | + | chr3_1:86958277-86958296 | Msa0383920:CDS | 35.0% | |
| GATTCTACCATTTGTGATGA+AGG | - | chr3_1:86958287-86958306 | None:intergenic | 35.0% | |
| AATATTGACAAATCCAGGAC+CGG | - | chr3_1:86958321-86958340 | None:intergenic | 35.0% | |
| ATGATCCAAACAACACACTA+GGG | - | chr3_1:86958419-86958438 | None:intergenic | 35.0% | |
| !! | TTACCGATGGTATTGATTCA+TGG | + | chr3_1:86958485-86958504 | Msa0383920:CDS | 35.0% |
| !! | TACCGATGGTATTGATTCAT+GGG | + | chr3_1:86958486-86958505 | Msa0383920:CDS | 35.0% |
| ATAGCGAAAGAAATGCATGT+TGG | + | chr3_1:86958559-86958578 | Msa0383920:CDS | 35.0% | |
| TTGATCCGCAGAAATCATAT+CGG | + | chr3_1:86958649-86958668 | Msa0383920:CDS | 35.0% | |
| TGTTCAGAACCTTATGTCTT+TGG | + | chr3_1:86958850-86958869 | Msa0383920:intron | 35.0% | |
| GTTCAGAACCTTATGTCTTT+GGG | + | chr3_1:86958851-86958870 | Msa0383920:intron | 35.0% | |
| GGTTTGGAAATTTCTCAAAG+AGG | - | chr3_1:86959200-86959219 | None:intergenic | 35.0% | |
| TCATTAACATCTTCTGGGTT+TGG | - | chr3_1:86959216-86959235 | None:intergenic | 35.0% | |
| ATCTGATATTGGAGATCTAC+AGG | + | chr3_1:86959236-86959255 | Msa0383920:CDS | 35.0% | |
| ! | TCATACCAGTTTTCATAGGT+AGG | + | chr3_1:86959283-86959302 | Msa0383920:intron | 35.0% |
| AAACACCTACCTATGAAAAC+TGG | - | chr3_1:86959291-86959310 | None:intergenic | 35.0% | |
| ! | CATATGTTGGTCGGTAATTT+TGG | + | chr3_1:86959314-86959333 | Msa0383920:intron | 35.0% |
| !! | ACTTATCTTTTCAAGGCTGT+TGG | - | chr3_1:86959506-86959525 | None:intergenic | 35.0% |
| !! | AGGTGTGAACTCTGAAATAA+AGG | + | chr3_1:86959592-86959611 | Msa0383920:intron | 35.0% |
| ATGAACAATCAACCTTGAAG+TGG | + | chr3_1:86959660-86959679 | Msa0383920:intron | 35.0% | |
| ! | CAATAAACATTGCCACTTCA+AGG | - | chr3_1:86959675-86959694 | None:intergenic | 35.0% |
| CTTGAAGTGGCAATGTTTAT+TGG | + | chr3_1:86959673-86959692 | Msa0383920:intron | 35.0% | |
| TCTATAAGGCCTCAAAATTG+AGG | + | chr3_1:86959796-86959815 | Msa0383920:CDS | 35.0% | |
| !!! | TCTGCCTGAATTTTGATTTC+AGG | + | chr3_1:86959972-86959991 | Msa0383920:intron | 35.0% |
| !!! | CTGCCTGAATTTTGATTTCA+GGG | + | chr3_1:86959973-86959992 | Msa0383920:intron | 35.0% |
| !!! | CTGAATTTTGATTTCAGGGA+GGG | + | chr3_1:86959977-86959996 | Msa0383920:intron | 35.0% |
| !!! | TGAATTTTGATTTCAGGGAG+GGG | + | chr3_1:86959978-86959997 | Msa0383920:intron | 35.0% |
| ! | TTTTATCTGTATCTCCCATG+TGG | + | chr3_1:86960112-86960131 | Msa0383920:intron | 35.0% |
| AGAGATGAGAAATTCCACAT+GGG | - | chr3_1:86960129-86960148 | None:intergenic | 35.0% | |
| AAGAGATGAGAAATTCCACA+TGG | - | chr3_1:86960130-86960149 | None:intergenic | 35.0% | |
| TAAGCGATAGTAGAGAAAAG+TGG | + | chr3_1:86960260-86960279 | Msa0383920:intron | 35.0% | |
| AAGCGATAGTAGAGAAAAGT+GGG | + | chr3_1:86960261-86960280 | Msa0383920:intron | 35.0% | |
| !! | GATTTCCTTACTGATTTGTG+AGG | + | chr3_1:86960642-86960661 | Msa0383920:intron | 35.0% |
| !! | TTGTTTCTAGGGAAAGTGAA+TGG | - | chr3_1:86960777-86960796 | None:intergenic | 35.0% |
| ! | TCTTTTTCCTTGTTCTGTGA+CGG | + | chr3_1:86961207-86961226 | Msa0383920:intron | 35.0% |
| TGGTCAGTGTAGCATTAAAT+TGG | + | chr3_1:86961413-86961432 | Msa0383920:intron | 35.0% | |
| TTGGAGAAACTGGAGAAATT+AGG | + | chr3_1:86961604-86961623 | Msa0383920:CDS | 35.0% | |
| TGGAGAAACTGGAGAAATTA+GGG | + | chr3_1:86961605-86961624 | Msa0383920:CDS | 35.0% | |
| ! | TCTCTTTTCACAGCAATTAG+TGG | - | chr3_1:86961685-86961704 | None:intergenic | 35.0% |
| CTAATTGCTGTGAAAAGAGA+TGG | + | chr3_1:86961685-86961704 | Msa0383920:CDS | 35.0% | |
| ! | AGAAGAGTATGTGATAGGTT+AGG | + | chr3_1:86961903-86961922 | Msa0383920:intron | 35.0% |
| CTCCAATAGTTAGACTTAGA+GGG | + | chr3_1:86961942-86961961 | Msa0383920:intron | 35.0% | |
| TTCCCTCTAAGTCTAACTAT+TGG | - | chr3_1:86961947-86961966 | None:intergenic | 35.0% | |
| GACTTAGAGGGAAAATACAA+AGG | + | chr3_1:86961954-86961973 | Msa0383920:intron | 35.0% | |
| TGAATGACGAAAAGCTTGAT+TGG | + | chr3_1:86962247-86962266 | Msa0383920:CDS | 35.0% | |
| CAGTATCAGTAGCACTAATT+GGG | - | chr3_1:86962333-86962352 | None:intergenic | 35.0% | |
| ! | TAAATGTCTGACATCCCTTT+TGG | + | chr3_1:86962362-86962381 | Msa0383920:intron | 35.0% |
| !!! | TCCCTTTTGGTTTTTCTATC+AGG | + | chr3_1:86962375-86962394 | Msa0383920:intron | 35.0% |
| GCCTGATAGAAAAACCAAAA+GGG | - | chr3_1:86962379-86962398 | None:intergenic | 35.0% | |
| GGATATTCATTTGGATCCTT+TGG | - | chr3_1:86962424-86962443 | None:intergenic | 35.0% | |
| TATCCAATATGCACTCACAT+AGG | + | chr3_1:86962439-86962458 | Msa0383920:CDS | 35.0% | |
| AAACCTATGTGAGTGCATAT+TGG | - | chr3_1:86962445-86962464 | None:intergenic | 35.0% | |
| ! | ATATGCACTCACATAGGTTT+TGG | + | chr3_1:86962445-86962464 | Msa0383920:CDS | 35.0% |
| !!! | ATAGGTTTTGGTCTTGTTCT+TGG | + | chr3_1:86962457-86962476 | Msa0383920:CDS | 35.0% |
| !! | TTTGATTCTGGTTTGCATGA+AGG | - | chr3_1:86962624-86962643 | None:intergenic | 35.0% |
| AGAGATTGAGAAAACATCAG+AGG | + | chr3_1:86962749-86962768 | Msa0383920:CDS | 35.0% | |
| ! | GAAAGCATGTTGGTCATTAT+GGG | - | chr3_1:86962824-86962843 | None:intergenic | 35.0% |
| AAGTATATACCAGCCAGATT+CGG | - | chr3_1:86962979-86962998 | None:intergenic | 35.0% | |
| GAGCTTATAATAAGGGAAAG+AGG | - | chr3_1:86963090-86963109 | None:intergenic | 35.0% | |
| GGCAAAAGGAGCTTATAATA+AGG | - | chr3_1:86963098-86963117 | None:intergenic | 35.0% | |
| TGAACACACTCATATACGAA+GGG | - | chr3_1:86963192-86963211 | None:intergenic | 35.0% | |
| TTGAACACACTCATATACGA+AGG | - | chr3_1:86963193-86963212 | None:intergenic | 35.0% | |
| !! | AAATGTATTTAGTTTGGGGG+GGG | + | chr3_1:86963278-86963297 | Msa0383920:intron | 35.0% |
| CTAAAAGTTCCCCATTTATC+AGG | + | chr3_1:86963593-86963612 | Msa0383920:intron | 35.0% | |
| GTCTCAAATGACTCAACATA+TGG | + | chr3_1:86963626-86963645 | Msa0383920:intron | 35.0% | |
| ATTCAACATTCCAAGAACAG+AGG | - | chr3_1:86963692-86963711 | None:intergenic | 35.0% | |
| TACATTAGTAGGTTTCATGG+GGG | - | chr3_1:86964033-86964052 | None:intergenic | 35.0% | |
| GTTGGACAAAAAGCTTAGAA+AGG | - | chr3_1:86964073-86964092 | None:intergenic | 35.0% | |
| ! | TTCTAAGCTTTTTGTCCAAC+AGG | + | chr3_1:86964073-86964092 | Msa0383920:intron | 35.0% |
| ! | TCTAAGCTTTTTGTCCAACA+GGG | + | chr3_1:86964074-86964093 | Msa0383920:intron | 35.0% |
| !! | ATTTGTTGTATGCACATGCT+AGG | + | chr3_1:86964111-86964130 | Msa0383920:CDS | 35.0% |
| TGTTCCATTATCAGGAAATC+TGG | + | chr3_1:86964137-86964156 | Msa0383920:CDS | 35.0% | |
| !! | ACAGAATGGTAATTTGGTGT+TGG | + | chr3_1:86964443-86964462 | Msa0383920:intron | 35.0% |
| !!! | ACGTCAGTGCATATGTTTTT+TGG | - | chr3_1:86964682-86964701 | None:intergenic | 35.0% |
| AGGTATTCACACAACATGTT+TGG | - | chr3_1:86964754-86964773 | None:intergenic | 35.0% | |
| AGATTTCGGCCAAATTATAC+AGG | - | chr3_1:86964774-86964793 | None:intergenic | 35.0% | |
| !! | CAAGTGTTGCTTCACATAAA+AGG | - | chr3_1:86964945-86964964 | None:intergenic | 35.0% |
| TGTAAACTGGATCAATTCCA+AGG | - | chr3_1:86964993-86965012 | None:intergenic | 35.0% | |
| ! | CATTTAGTGCATAGAAGTGT+AGG | + | chr3_1:86965073-86965092 | Msa0383920:three_prime_UTR | 35.0% |
| TAGAAGGAGAACACAATGGA+GGG | - | chr3_1:86957733-86957752 | None:intergenic | 40.0% | |
| ATGAAGAAACTCAGAGAGAG+GGG | - | chr3_1:86957765-86957784 | None:intergenic | 40.0% | |
| GATGAAGAAACTCAGAGAGA+GGG | - | chr3_1:86957766-86957785 | None:intergenic | 40.0% | |
| !! | ATGAACATGGTGGATATGGA+TGG | - | chr3_1:86957831-86957850 | None:intergenic | 40.0% |
| GCAATTGGCCAAATTGTTTG+GGG | + | chr3_1:86957970-86957989 | Msa0383920:CDS | 40.0% | |
| TTCACAAATCCACGTTCACT+TGG | + | chr3_1:86958239-86958258 | Msa0383920:CDS | 40.0% | |
| ATCAAAGAACTGGATAGCAC+AGG | + | chr3_1:86958346-86958365 | Msa0383920:CDS | 40.0% | |
| CATGATCCAAACAACACACT+AGG | - | chr3_1:86958420-86958439 | None:intergenic | 40.0% | |
| TGCCCATGAATCAATACCAT+CGG | - | chr3_1:86958491-86958510 | None:intergenic | 40.0% | |
| ACTTCCAATCAAGAGGGTTA+TGG | + | chr3_1:86958516-86958535 | Msa0383920:CDS | 40.0% | |
| TCAACCATAACCCTCTTGAT+TGG | - | chr3_1:86958523-86958542 | None:intergenic | 40.0% | |
| TTCTTTCGCTATATTGGGTG+AGG | - | chr3_1:86958551-86958570 | None:intergenic | 40.0% | |
| ACCTCAGGTCAACCATTATT+GGG | + | chr3_1:86958584-86958603 | Msa0383920:CDS | 40.0% | |
| TTTCTGCGGATCAAACATTC+AGG | - | chr3_1:86958643-86958662 | None:intergenic | 40.0% | |
| AGTCACCGATATGATTTCTG+CGG | - | chr3_1:86958657-86958676 | None:intergenic | 40.0% | |
| CAGAAATCATATCGGTGACT+GGG | + | chr3_1:86958657-86958676 | Msa0383920:CDS | 40.0% | |
| AGAAATCATATCGGTGACTG+GGG | + | chr3_1:86958658-86958677 | Msa0383920:CDS | 40.0% | |
| !! | GCTATTTCTTGTGTTGTGAC+TGG | + | chr3_1:86958740-86958759 | Msa0383920:intron | 40.0% |
| TGCTATACAGTGTCAAAGCT+AGG | + | chr3_1:86958769-86958788 | Msa0383920:intron | 40.0% | |
| AGGAATCACCCAAAGACATA+AGG | - | chr3_1:86958862-86958881 | None:intergenic | 40.0% | |
| ! | CTAGTTGTATTTGGGACCAA+TGG | + | chr3_1:86958902-86958921 | Msa0383920:intron | 40.0% |
| AACCAACTTACATCAGCCAT+TGG | - | chr3_1:86958921-86958940 | None:intergenic | 40.0% | |
| CAGCACGACTTCGTTTAATT+TGG | - | chr3_1:86958983-86959002 | None:intergenic | 40.0% | |
| !! | CATGCATTGATTTCGCAGTT+CGG | + | chr3_1:86959159-86959178 | Msa0383920:intron | 40.0% |
| !! | ATGCATTGATTTCGCAGTTC+GGG | + | chr3_1:86959160-86959179 | Msa0383920:intron | 40.0% |
| TCTACAGGTGAGATAACATG+TGG | + | chr3_1:86959251-86959270 | Msa0383920:intron | 40.0% | |
| !!! | TTGGTCGGTAATTTTGGTTC+AGG | + | chr3_1:86959320-86959339 | Msa0383920:intron | 40.0% |
| AATGATAACAACCATGCAGC+TGG | - | chr3_1:86959367-86959386 | None:intergenic | 40.0% | |
| ! | TTGGAGTTGGGTGCATTTTT+AGG | + | chr3_1:86959770-86959789 | Msa0383920:intron | 40.0% |
| ATGTAAAACCAATTCCGCGT+GGG | - | chr3_1:86959946-86959965 | None:intergenic | 40.0% | |
| AATGTAAAACCAATTCCGCG+TGG | - | chr3_1:86959947-86959966 | None:intergenic | 40.0% | |
| CCTCCCTGAAATCAAAATTC+AGG | - | chr3_1:86959979-86959998 | None:intergenic | 40.0% | |
| !!! | CCTGAATTTTGATTTCAGGG+AGG | + | chr3_1:86959976-86959995 | Msa0383920:intron | 40.0% |
| TTCGTTTGGAGGAAATGGTA+AGG | + | chr3_1:86960082-86960101 | Msa0383920:intron | 40.0% | |
| TCGTTTGGAGGAAATGGTAA+GGG | + | chr3_1:86960083-86960102 | Msa0383920:intron | 40.0% | |
| ACCATCTTATCTCACCAAGT+GGG | - | chr3_1:86960407-86960426 | None:intergenic | 40.0% | |
| AACCATCTTATCTCACCAAG+TGG | - | chr3_1:86960408-86960427 | None:intergenic | 40.0% | |
| AATTAGCTGCTTCTCTCACA+TGG | - | chr3_1:86960535-86960554 | None:intergenic | 40.0% | |
| TGTGAGAGAAGCAGCTAATT+TGG | + | chr3_1:86960535-86960554 | Msa0383920:intron | 40.0% | |
| CCTTTCCTCACAAATCAGTA+AGG | - | chr3_1:86960650-86960669 | None:intergenic | 40.0% | |
| !! | CCTTACTGATTTGTGAGGAA+AGG | + | chr3_1:86960647-86960666 | Msa0383920:intron | 40.0% |
| ! | TGAGGAAAGGTTTTTGCAAG+TGG | + | chr3_1:86960660-86960679 | Msa0383920:intron | 40.0% |
| ! | GAGGAAAGGTTTTTGCAAGT+GGG | + | chr3_1:86960661-86960680 | Msa0383920:intron | 40.0% |
| ! | GAGGAAAGAAACCATGGTTT+TGG | - | chr3_1:86960691-86960710 | None:intergenic | 40.0% |
| ACAATGTCTTAGGGTGTGTT+TGG | + | chr3_1:86960797-86960816 | Msa0383920:intron | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr3_1:86960805-86960824 | Msa0383920:intron | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr3_1:86960811-86960830 | Msa0383920:intron | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | + | chr3_1:86960815-86960834 | Msa0383920:intron | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | - | chr3_1:86960815-86960834 | None:intergenic | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | - | chr3_1:86960811-86960830 | None:intergenic | 40.0% | |
| ! | TAAGGGTGTGTTTGGATTGA+GGG | - | chr3_1:86961034-86961053 | None:intergenic | 40.0% |
| TCTAAGAGACCCAACACTAA+GGG | - | chr3_1:86961051-86961070 | None:intergenic | 40.0% | |
| ! | TTCTAAGAGACCCAACACTA+AGG | - | chr3_1:86961052-86961071 | None:intergenic | 40.0% |
| AATGCTGTCTGTTGTTAGTG+TGG | + | chr3_1:86961111-86961130 | Msa0383920:intron | 40.0% | |
| ! | GGCTTTTATTGAATGCGTAG+TGG | + | chr3_1:86961132-86961151 | Msa0383920:intron | 40.0% |
| TTCTGTGACGGCAATATGTT+TGG | + | chr3_1:86961219-86961238 | Msa0383920:intron | 40.0% | |
| TGGTTGCTTGAATTTGCATC+AGG | + | chr3_1:86961243-86961262 | Msa0383920:intron | 40.0% | |
| GGTTGCTTGAATTTGCATCA+GGG | + | chr3_1:86961244-86961263 | Msa0383920:intron | 40.0% | |
| !! | AATGGATTGAAGAAGCTCTC+TGG | - | chr3_1:86961571-86961590 | None:intergenic | 40.0% |
| TCCATTAATCCCTCCAACTT+TGG | + | chr3_1:86961585-86961604 | Msa0383920:CDS | 40.0% | |
| TCCAAAGTTGGAGGGATTAA+TGG | - | chr3_1:86961589-86961608 | None:intergenic | 40.0% | |
| TTCTCCAGTTTCTCCAAAGT+TGG | - | chr3_1:86961601-86961620 | None:intergenic | 40.0% | |
| GGGCTGATTGAAGAAAATGA+TGG | + | chr3_1:86961625-86961644 | Msa0383920:CDS | 40.0% | |
| ! | TGCTCGTGTGATATTTGTTG+AGG | + | chr3_1:86961648-86961667 | Msa0383920:CDS | 40.0% |
| ! | GCTCGTGTGATATTTGTTGA+GGG | + | chr3_1:86961649-86961668 | Msa0383920:CDS | 40.0% |
| ATTGCTGTGAAAAGAGATGG+TGG | + | chr3_1:86961688-86961707 | Msa0383920:CDS | 40.0% | |
| CAACTGATCTAGCATCACTT+CGG | + | chr3_1:86961725-86961744 | Msa0383920:CDS | 40.0% | |
| ! | GTTTATCTTGGTGTGACCTT+TGG | + | chr3_1:86961838-86961857 | Msa0383920:intron | 40.0% |
| GTATGTGATAGGTTAGGTGA+AGG | + | chr3_1:86961909-86961928 | Msa0383920:intron | 40.0% | |
| GCTCCAATAGTTAGACTTAG+AGG | + | chr3_1:86961941-86961960 | Msa0383920:intron | 40.0% | |
| TCGTGTTTGCTTTGTGTAAC+TGG | + | chr3_1:86962052-86962071 | Msa0383920:intron | 40.0% | |
| CTGCAAAGTTCAAGTGGTTA+AGG | - | chr3_1:86962219-86962238 | None:intergenic | 40.0% | |
| CTTAACCACTTGAACTTTGC+AGG | + | chr3_1:86962217-86962236 | Msa0383920:intron | 40.0% | |
| ATGTTACAGATGTTGGTCAG+TGG | + | chr3_1:86962277-86962296 | Msa0383920:CDS | 40.0% | |
| GCAGTATCAGTAGCACTAAT+TGG | - | chr3_1:86962334-86962353 | None:intergenic | 40.0% | |
| GGCCTGATAGAAAAACCAAA+AGG | - | chr3_1:86962380-86962399 | None:intergenic | 40.0% | |
| ! | GGTTTTTCTATCAGGCCTTT+AGG | + | chr3_1:86962383-86962402 | Msa0383920:intron | 40.0% |
| !! | GCGATGATGGAAAACGATTT+CGG | + | chr3_1:86962479-86962498 | Msa0383920:CDS | 40.0% |
| AAAGTTGCTCTTCTTGAACG+TGG | + | chr3_1:86962562-86962581 | Msa0383920:CDS | 40.0% | |
| TAATGCTAAAGATTGGACGG+AGG | + | chr3_1:86962725-86962744 | Msa0383920:CDS | 40.0% | |
| GAGAAAACATCAGAGGCAAT+TGG | + | chr3_1:86962756-86962775 | Msa0383920:CDS | 40.0% | |
| ACATCAGAGGCAATTGGATA+TGG | + | chr3_1:86962762-86962781 | Msa0383920:CDS | 40.0% | |
| CATCAGAGGCAATTGGATAT+GGG | + | chr3_1:86962763-86962782 | Msa0383920:CDS | 40.0% | |
| ATCAGAGGCAATTGGATATG+GGG | + | chr3_1:86962764-86962783 | Msa0383920:CDS | 40.0% | |
| ! | GGAAAGCATGTTGGTCATTA+TGG | - | chr3_1:86962825-86962844 | None:intergenic | 40.0% |
| ! | CATATTGCTGGAAAGCATGT+TGG | - | chr3_1:86962834-86962853 | None:intergenic | 40.0% |
| !! | AATGTATTTAGTTTGGGGGG+GGG | + | chr3_1:86963279-86963298 | Msa0383920:intron | 40.0% |
| !! | AGCTCAATTGGTTTGAGCTA+AGG | + | chr3_1:86963342-86963361 | Msa0383920:intron | 40.0% |
| !! | GCTCAATTGGTTTGAGCTAA+GGG | + | chr3_1:86963343-86963362 | Msa0383920:intron | 40.0% |
| ! | TTGGTTTGAGCTAAGGGAAA+AGG | + | chr3_1:86963349-86963368 | Msa0383920:intron | 40.0% |
| AGGCTTAAATTTGGGGATTG+AGG | + | chr3_1:86963524-86963543 | Msa0383920:intron | 40.0% | |
| GGTAGTTAAAAGCCAAAGCA+CGG | + | chr3_1:86963545-86963564 | Msa0383920:intron | 40.0% | |
| GTAGTTAAAAGCCAAAGCAC+GGG | + | chr3_1:86963546-86963565 | Msa0383920:intron | 40.0% | |
| AAAAAAAGCAACCCGTGCTT+TGG | - | chr3_1:86963560-86963579 | None:intergenic | 40.0% | |
| CTGCAAAGCATGAACATGAT+GGG | - | chr3_1:86963732-86963751 | None:intergenic | 40.0% | |
| TCTGCAAAGCATGAACATGA+TGG | - | chr3_1:86963733-86963752 | None:intergenic | 40.0% | |
| CTAGGATCTGTTCCATTATC+AGG | + | chr3_1:86964129-86964148 | Msa0383920:CDS | 40.0% | |
| TTTACCAACTCGTGACAGAA+TGG | + | chr3_1:86964429-86964448 | Msa0383920:intron | 40.0% | |
| ATTACCATTCTGTCACGAGT+TGG | - | chr3_1:86964436-86964455 | None:intergenic | 40.0% | |
| CTCGTGACAGAATGGTAATT+TGG | + | chr3_1:86964437-86964456 | Msa0383920:intron | 40.0% | |
| CACTACAAGTGTAACATGCA+AGG | - | chr3_1:86964552-86964571 | None:intergenic | 40.0% | |
| ! | AATGCCTTTGTCAGGTTGTT+GGG | + | chr3_1:86964896-86964915 | Msa0383920:intron | 40.0% |
| AGACATTGCTTCTATCTCCT+TGG | + | chr3_1:86964973-86964992 | Msa0383920:CDS | 40.0% | |
| ! | GTGGGTCATAACTTGTAAAC+TGG | - | chr3_1:86965006-86965025 | None:intergenic | 40.0% |
| TCTTGAACTCCTCATTGAGA+TGG | - | chr3_1:86965028-86965047 | None:intergenic | 40.0% | |
| ! | TAGGCTAGGTAGGGGTTTTT+CGG | - | chr3_1:86957704-86957723 | None:intergenic | 45.0% |
| AGAAGGAGAACACAATGGAG+GGG | - | chr3_1:86957732-86957751 | None:intergenic | 45.0% | |
| CTAGAAGGAGAACACAATGG+AGG | - | chr3_1:86957734-86957753 | None:intergenic | 45.0% | |
| ! | AGAGGGGAGACTTTTCTAGA+AGG | - | chr3_1:86957749-86957768 | None:intergenic | 45.0% |
| GGATGAAGAAACTCAGAGAG+AGG | - | chr3_1:86957767-86957786 | None:intergenic | 45.0% | |
| AATTGCTTCTTCACACTCGC+AGG | - | chr3_1:86957956-86957975 | None:intergenic | 45.0% | |
| TGCGAGTGTGAAGAAGCAAT+TGG | + | chr3_1:86957955-86957974 | Msa0383920:CDS | 45.0% | |
| GAGAGCTTCCCCAAACAATT+TGG | - | chr3_1:86957981-86958000 | None:intergenic | 45.0% | |
| ! | ACAATGGCATCGGATTGAGT+GGG | - | chr3_1:86958016-86958035 | None:intergenic | 45.0% |
| AAATCCACGTTCACTTGGAG+AGG | + | chr3_1:86958244-86958263 | Msa0383920:CDS | 45.0% | |
| AATCCACGTTCACTTGGAGA+GGG | + | chr3_1:86958245-86958264 | Msa0383920:CDS | 45.0% | |
| ! | TGTCTCCCTAGTGTGTTGTT+TGG | + | chr3_1:86958411-86958430 | Msa0383920:intron | 45.0% |
| TTACAGAGGATGCTTACCGA+TGG | + | chr3_1:86958472-86958491 | Msa0383920:CDS | 45.0% | |
| ACCTCGACTTCCAATCAAGA+GGG | + | chr3_1:86958510-86958529 | Msa0383920:CDS | 45.0% | |
| AAATGCATGTTGGTCACCTC+AGG | + | chr3_1:86958569-86958588 | Msa0383920:CDS | 45.0% | |
| CACCTCAGGTCAACCATTAT+TGG | + | chr3_1:86958583-86958602 | Msa0383920:CDS | 45.0% | |
| CCTCAGGTCAACCATTATTG+GGG | + | chr3_1:86958585-86958604 | Msa0383920:CDS | 45.0% | |
| TGCAAGTGTGTCCCCAATAA+TGG | - | chr3_1:86958599-86958618 | None:intergenic | 45.0% | |
| GCAGAAATCATATCGGTGAC+TGG | + | chr3_1:86958656-86958675 | Msa0383920:CDS | 45.0% | |
| GACCAATGGCTGATGTAAGT+TGG | + | chr3_1:86958916-86958935 | Msa0383920:intron | 45.0% | |
| CGAACTGCGAAATCAATGCA+TGG | - | chr3_1:86959161-86959180 | None:intergenic | 45.0% | |
| TGTCTAGTTAACCAGCTGCA+TGG | + | chr3_1:86959353-86959372 | Msa0383920:intron | 45.0% | |
| ! | AAGGCTGTTGGCTGTTTCAT+GGG | - | chr3_1:86959494-86959513 | None:intergenic | 45.0% |
| GTTAAATGCACAGCAGTCAG+TGG | + | chr3_1:86959842-86959861 | Msa0383920:CDS | 45.0% | |
| AACAAGGTCTATCAACGCCT+TGG | + | chr3_1:86960057-86960076 | Msa0383920:CDS | 45.0% | |
| ACAAGGTCTATCAACGCCTT+GGG | + | chr3_1:86960058-86960077 | Msa0383920:CDS | 45.0% | |
| TTTCCTCCAAACGAATCCCA+AGG | - | chr3_1:86960077-86960096 | None:intergenic | 45.0% | |
| TGGGATTCGTTTGGAGGAAA+TGG | + | chr3_1:86960077-86960096 | Msa0383920:CDS | 45.0% | |
| CGATAGTAGAGAAAAGTGGG+AGG | + | chr3_1:86960264-86960283 | Msa0383920:intron | 45.0% | |
| ACCATATTGACGATCCCACT+TGG | + | chr3_1:86960390-86960409 | Msa0383920:intron | 45.0% | |
| ACCAAGTGGGATCGTCAATA+TGG | - | chr3_1:86960394-86960413 | None:intergenic | 45.0% | |
| ! | TCCCACTTGGTGAGATAAGA+TGG | + | chr3_1:86960403-86960422 | Msa0383920:intron | 45.0% |
| GTCAGAGAGGAAAGAAACCA+TGG | - | chr3_1:86960697-86960716 | None:intergenic | 45.0% | |
| ! | GTTTGGTTTCTCTGTCAGAG+AGG | - | chr3_1:86960710-86960729 | None:intergenic | 45.0% |
| TCTGACAGAGAAACCAAACG+AGG | + | chr3_1:86960711-86960730 | Msa0383920:intron | 45.0% | |
| CTGACAGAGAAACCAAACGA+GGG | + | chr3_1:86960712-86960731 | Msa0383920:intron | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | + | chr3_1:86960804-86960823 | Msa0383920:intron | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | + | chr3_1:86960814-86960833 | Msa0383920:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | chr3_1:86960816-86960835 | Msa0383920:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr3_1:86960816-86960835 | None:intergenic | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | - | chr3_1:86960814-86960833 | None:intergenic | 45.0% | |
| ! | CTAAGGGTGTGTTTGGATTG+AGG | - | chr3_1:86961035-86961054 | None:intergenic | 45.0% |
| TCCAAACACACCCTTAGTGT+TGG | + | chr3_1:86961038-86961057 | Msa0383920:intron | 45.0% | |
| CCAAACACACCCTTAGTGTT+GGG | + | chr3_1:86961039-86961058 | Msa0383920:intron | 45.0% | |
| CATATTGCCGTCACAGAACA+AGG | - | chr3_1:86961217-86961236 | None:intergenic | 45.0% | |
| CCAGTTTCTCCAAAGTTGGA+GGG | - | chr3_1:86961597-86961616 | None:intergenic | 45.0% | |
| TCCAGTTTCTCCAAAGTTGG+AGG | - | chr3_1:86961598-86961617 | None:intergenic | 45.0% | |
| ! | TATCTTGGTGTGACCTTTGG+TGG | + | chr3_1:86961841-86961860 | Msa0383920:intron | 45.0% |
| ATAGGTTAGGTGAAGGTCGA+AGG | + | chr3_1:86961916-86961935 | Msa0383920:intron | 45.0% | |
| TAGGTTAGGTGAAGGTCGAA+GGG | + | chr3_1:86961917-86961936 | Msa0383920:intron | 45.0% | |
| ! | TGCTTTGTGTAACTGGTCTC+AGG | + | chr3_1:86962059-86962078 | Msa0383920:intron | 45.0% |
| ! | TTGTGTAACTGGTCTCAGGT+AGG | + | chr3_1:86962063-86962082 | Msa0383920:intron | 45.0% |
| CGATACCTGCAAAGTTCAAG+TGG | - | chr3_1:86962225-86962244 | None:intergenic | 45.0% | |
| CTGCTCTAATGTTCCGAATC+TGG | + | chr3_1:86962963-86962982 | Msa0383920:intron | 45.0% | |
| TCTAATGTTCCGAATCTGGC+TGG | + | chr3_1:86962967-86962986 | Msa0383920:intron | 45.0% | |
| !! | ATGTATTTAGTTTGGGGGGG+GGG | + | chr3_1:86963280-86963299 | Msa0383920:intron | 45.0% |
| TGAGCTAAGGGAAAAGGAGT+TGG | + | chr3_1:86963355-86963374 | Msa0383920:intron | 45.0% | |
| ! | TGGGGAACTTTTAGCATGAG+AGG | - | chr3_1:86963587-86963606 | None:intergenic | 45.0% |
| TCTGCTTATGCCTCTGTTCT+TGG | + | chr3_1:86963679-86963698 | Msa0383920:intron | 45.0% | |
| AAACAGCGGTATTTCCCTGT+TGG | - | chr3_1:86964091-86964110 | None:intergenic | 45.0% | |
| CATGAAGACGAGCGTACATT+GGG | + | chr3_1:86964468-86964487 | Msa0383920:CDS | 45.0% | |
| ! | GAATGCCTTTGTCAGGTTGT+TGG | + | chr3_1:86964895-86964914 | Msa0383920:intron | 45.0% |
| ! | AGGAGTCTACTAGTTTCCTG+AGG | - | chr3_1:86964925-86964944 | None:intergenic | 45.0% |
| TATGACCCACCATCTCAATG+AGG | + | chr3_1:86965016-86965035 | Msa0383920:exon | 45.0% | |
| GAACTCCTCATTGAGATGGT+GGG | - | chr3_1:86965024-86965043 | None:intergenic | 45.0% | |
| TGAACTCCTCATTGAGATGG+TGG | - | chr3_1:86965025-86965044 | None:intergenic | 45.0% | |
| !!! | ATTATTATTTTTATTATTTC+GGG | + | chr3_1:86957892-86957911 | Msa0383920:intron | 5.0% |
| !!! | TTTATTATTATTTTTTTGAA+TGG | - | chr3_1:86963447-86963466 | None:intergenic | 5.0% |
| !! | CAATTAAAATAAAATAAAAT+TGG | - | chr3_1:86965318-86965337 | None:intergenic | 5.0% |
| AGAGGAGTAGGGGCTCATTT+GGG | - | chr3_1:86957669-86957688 | None:intergenic | 50.0% | |
| AGTGAGAGAGAGAGGAGTAG+GGG | - | chr3_1:86957679-86957698 | None:intergenic | 50.0% | |
| GAGTGAGAGAGAGAGGAGTA+GGG | - | chr3_1:86957680-86957699 | None:intergenic | 50.0% | |
| TGAGTGAGAGAGAGAGGAGT+AGG | - | chr3_1:86957681-86957700 | None:intergenic | 50.0% | |
| TTTCGGTGAGTGAGAGAGAG+AGG | - | chr3_1:86957687-86957706 | None:intergenic | 50.0% | |
| GAAGGAGAACACAATGGAGG+GGG | - | chr3_1:86957731-86957750 | None:intergenic | 50.0% | |
| !! | AACACTGACTCTCGCAAGAG+AGG | - | chr3_1:86957788-86957807 | None:intergenic | 50.0% |
| ! | GACAATGGCATCGGATTGAG+TGG | - | chr3_1:86958017-86958036 | None:intergenic | 50.0% |
| GTAGAATCGTGCTCTGTTGC+CGG | + | chr3_1:86958299-86958318 | Msa0383920:CDS | 50.0% | |
| TCCTCCTGCAGAGATTACAG+AGG | + | chr3_1:86958458-86958477 | Msa0383920:intron | 50.0% | |
| TCCTCTGTAATCTCTGCAGG+AGG | - | chr3_1:86958462-86958481 | None:intergenic | 50.0% | |
| GCATCCTCTGTAATCTCTGC+AGG | - | chr3_1:86958465-86958484 | None:intergenic | 50.0% | |
| CACCTCGACTTCCAATCAAG+AGG | + | chr3_1:86958509-86958528 | Msa0383920:CDS | 50.0% | |
| ACCCTCTTGATTGGAAGTCG+AGG | - | chr3_1:86958514-86958533 | None:intergenic | 50.0% | |
| CCCCAATAATGGTTGACCTG+AGG | - | chr3_1:86958588-86958607 | None:intergenic | 50.0% | |
| TGCGGATCAAACATTCAGGC+TGG | - | chr3_1:86958639-86958658 | None:intergenic | 50.0% | |
| ! | CAAGGCTGTTGGCTGTTTCA+TGG | - | chr3_1:86959495-86959514 | None:intergenic | 50.0% |
| GCAATGACCTTGCAAACAGG+GGG | - | chr3_1:86959924-86959943 | None:intergenic | 50.0% | |
| GGCAATGACCTTGCAAACAG+GGG | - | chr3_1:86959925-86959944 | None:intergenic | 50.0% | |
| GGGCAATGACCTTGCAAACA+GGG | - | chr3_1:86959926-86959945 | None:intergenic | 50.0% | |
| TGGGCAATGACCTTGCAAAC+AGG | - | chr3_1:86959927-86959946 | None:intergenic | 50.0% | |
| TCAACGCCTTGGGATTCGTT+TGG | + | chr3_1:86960068-86960087 | Msa0383920:CDS | 50.0% | |
| !! | AAGTGGGAGCACCAAAACCA+TGG | + | chr3_1:86960677-86960696 | Msa0383920:intron | 50.0% |
| AAAAGTGGGCATCCCTCGTT+TGG | - | chr3_1:86960727-86960746 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | + | chr3_1:86960820-86960839 | Msa0383920:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | + | chr3_1:86960821-86960840 | Msa0383920:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | - | chr3_1:86960821-86960840 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | - | chr3_1:86960820-86960839 | None:intergenic | 50.0% | |
| ! | CCCAACACTAAGGGTGTGTT+TGG | - | chr3_1:86961042-86961061 | None:intergenic | 50.0% |
| GTGACGGCAATATGTTTGGC+TGG | + | chr3_1:86961223-86961242 | Msa0383920:intron | 50.0% | |
| TTGAAGAAGCTCTCTGGCTG+TGG | - | chr3_1:86961565-86961584 | None:intergenic | 50.0% | |
| ! | CCCTCCAACTTTGGAGAAAC+TGG | + | chr3_1:86961594-86961613 | Msa0383920:CDS | 50.0% |
| ! | TGGTGTGACCTTTGGTGGTT+TGG | + | chr3_1:86961846-86961865 | Msa0383920:intron | 50.0% |
| ! | GGTGTGACCTTTGGTGGTTT+GGG | + | chr3_1:86961847-86961866 | Msa0383920:intron | 50.0% |
| ! | GTGTGACCTTTGGTGGTTTG+GGG | + | chr3_1:86961848-86961867 | Msa0383920:intron | 50.0% |
| TGCAATCCCCAAACCACCAA+AGG | - | chr3_1:86961857-86961876 | None:intergenic | 50.0% | |
| ! | ACTGGTCTCAGGTAGGAAAG+AGG | + | chr3_1:86962070-86962089 | Msa0383920:intron | 50.0% |
| !! | GGTCTTGTTCTTGGCGATGA+TGG | + | chr3_1:86962466-86962485 | Msa0383920:CDS | 50.0% |
| !! | TGTATTTAGTTTGGGGGGGG+GGG | + | chr3_1:86963281-86963300 | Msa0383920:intron | 50.0% |
| GCTAAGGGAAAAGGAGTTGG+AGG | + | chr3_1:86963358-86963377 | Msa0383920:intron | 50.0% | |
| GAAAAGGAGTTGGAGGTCCT+GGG | + | chr3_1:86963365-86963384 | Msa0383920:intron | 50.0% | |
| ! | ATTTTCTGTGAGAGGGGAGC+AGG | - | chr3_1:86963908-86963927 | None:intergenic | 50.0% |
| TTTCATGGGGGACGAAGAAC+AGG | - | chr3_1:86964021-86964040 | None:intergenic | 50.0% | |
| GCATGAAGACGAGCGTACAT+TGG | + | chr3_1:86964467-86964486 | Msa0383920:CDS | 50.0% | |
| GAGAGGAGTAGGGGCTCATT+TGG | - | chr3_1:86957670-86957689 | None:intergenic | 55.0% | |
| ATGCCCTCTCCAAGTGAACG+TGG | - | chr3_1:86958251-86958270 | None:intergenic | 55.0% | |
| CTTTCTGCCCCCTGTTTGCA+AGG | + | chr3_1:86959914-86959933 | Msa0383920:intron | 55.0% | |
| TTGCAAGGTCATTGCCCACG+CGG | + | chr3_1:86959929-86959948 | Msa0383920:intron | 55.0% | |
| AGGGAGGGGATCCCAAGTAT+CGG | + | chr3_1:86959992-86960011 | Msa0383920:intron | 55.0% | |
| !! | AGGGGATCCCAAGTATCGGA+CGG | + | chr3_1:86959996-86960015 | Msa0383920:CDS | 55.0% |
| !! | ATCCCAAGTATCGGACGGCA+TGG | + | chr3_1:86960001-86960020 | Msa0383920:CDS | 55.0% |
| !! | TCCCAAGTATCGGACGGCAT+GGG | + | chr3_1:86960002-86960021 | Msa0383920:CDS | 55.0% |
| TCCCATGCCGTCCGATACTT+GGG | - | chr3_1:86960006-86960025 | None:intergenic | 55.0% | |
| TTCCCATGCCGTCCGATACT+TGG | - | chr3_1:86960007-86960026 | None:intergenic | 55.0% | |
| ACGCCTTGGGATTCGTTTGG+AGG | + | chr3_1:86960071-86960090 | Msa0383920:CDS | 55.0% | |
| TATCAGGCCTTTAGGCGTGC+AGG | + | chr3_1:86962391-86962410 | Msa0383920:intron | 55.0% | |
| ATCAGGCCTTTAGGCGTGCA+GGG | + | chr3_1:86962392-86962411 | Msa0383920:intron | 55.0% | |
| !! | GTATTTAGTTTGGGGGGGGG+GGG | + | chr3_1:86963282-86963301 | Msa0383920:intron | 55.0% |
| !! | TATTTAGTTTGGGGGGGGGG+GGG | + | chr3_1:86963283-86963302 | Msa0383920:intron | 55.0% |
| GGAAAAGGAGTTGGAGGTCC+TGG | + | chr3_1:86963364-86963383 | Msa0383920:intron | 55.0% | |
| GGAGGTCCTGGGTTCAAACT+CGG | + | chr3_1:86963376-86963395 | Msa0383920:intron | 55.0% | |
| CTTCGTCCGAGTTTGAACCC+AGG | - | chr3_1:86963385-86963404 | None:intergenic | 55.0% | |
| CTGGGTTCAAACTCGGACGA+AGG | + | chr3_1:86963383-86963402 | Msa0383920:intron | 55.0% | |
| !! | GGAGTGGGGGGCATCAATAA+TGG | - | chr3_1:86963875-86963894 | None:intergenic | 55.0% |
| GCGACCCAACAACCTGACAA+AGG | - | chr3_1:86964903-86964922 | None:intergenic | 55.0% | |
| ACACAATGGAGGGGGAGGCT+AGG | - | chr3_1:86957723-86957742 | None:intergenic | 60.0% | |
| GGAGAACACAATGGAGGGGG+AGG | - | chr3_1:86957728-86957747 | None:intergenic | 60.0% | |
| ! | TATCGGTGACTGGGGCACTC+AGG | + | chr3_1:86958666-86958685 | Msa0383920:CDS | 60.0% |
| GCAGTCAGTGGTCAAGCTCC+AGG | + | chr3_1:86959854-86959873 | Msa0383920:CDS | 60.0% | |
| GGTCATTGCCCACGCGGAAT+TGG | + | chr3_1:86959935-86959954 | Msa0383920:intron | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr3_1:86960824-86960843 | Msa0383920:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr3_1:86960825-86960844 | Msa0383920:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr3_1:86960826-86960845 | Msa0383920:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr3_1:86960826-86960845 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr3_1:86960825-86960844 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr3_1:86960824-86960843 | None:intergenic | 60.0% | |
| AAGCCACCCTGCACGCCTAA+AGG | - | chr3_1:86962401-86962420 | None:intergenic | 60.0% | |
| !! | ATTTAGTTTGGGGGGGGGGG+GGG | + | chr3_1:86963284-86963303 | Msa0383920:intron | 60.0% |
| GTGGGGTGGGGTAGCTCAAT+TGG | + | chr3_1:86963330-86963349 | Msa0383920:intron | 60.0% | |
| ! | TCAGGTTGTTGGGTCGCCTC+AGG | + | chr3_1:86964906-86964925 | Msa0383920:intron | 60.0% |
| GGGGAGGCTAGGCTAGGTAG+GGG | - | chr3_1:86957712-86957731 | None:intergenic | 65.0% | |
| GGGGGAGGCTAGGCTAGGTA+GGG | - | chr3_1:86957713-86957732 | None:intergenic | 65.0% | |
| AGGGGGAGGCTAGGCTAGGT+AGG | - | chr3_1:86957714-86957733 | None:intergenic | 65.0% | |
| ATGGAGGGGGAGGCTAGGCT+AGG | - | chr3_1:86957718-86957737 | None:intergenic | 65.0% | |
| TCGTGCTCTGTTGCCGGTCC+TGG | + | chr3_1:86958305-86958324 | Msa0383920:CDS | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr3_1:86960829-86960848 | Msa0383920:intron | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr3_1:86960830-86960849 | Msa0383920:intron | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr3_1:86960830-86960849 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr3_1:86960829-86960848 | None:intergenic | 65.0% | |
| AGGCCTTTAGGCGTGCAGGG+TGG | + | chr3_1:86962395-86962414 | Msa0383920:intron | 65.0% | |
| GCGTGCAGGGTGGCTTCCAA+AGG | + | chr3_1:86962405-86962424 | Msa0383920:CDS | 65.0% | |
| !! | TTTAGTTTGGGGGGGGGGGG+GGG | + | chr3_1:86963285-86963304 | Msa0383920:intron | 65.0% |
| AGGACAGGTCTGGGGAGTGG+GGG | - | chr3_1:86963888-86963907 | None:intergenic | 65.0% | |
| CAGGACAGGTCTGGGGAGTG+GGG | - | chr3_1:86963889-86963908 | None:intergenic | 65.0% | |
| GCAGGACAGGTCTGGGGAGT+GGG | - | chr3_1:86963890-86963909 | None:intergenic | 65.0% | |
| AGCAGGACAGGTCTGGGGAG+TGG | - | chr3_1:86963891-86963910 | None:intergenic | 65.0% | |
| AGGGGAGCAGGACAGGTCTG+GGG | - | chr3_1:86963896-86963915 | None:intergenic | 65.0% | |
| GAGGGGAGCAGGACAGGTCT+GGG | - | chr3_1:86963897-86963916 | None:intergenic | 65.0% | |
| AGAGGGGAGCAGGACAGGTC+TGG | - | chr3_1:86963898-86963917 | None:intergenic | 65.0% | |
| CTGTGAGAGGGGAGCAGGAC+AGG | - | chr3_1:86963903-86963922 | None:intergenic | 65.0% | |
| ! | TTAGTTTGGGGGGGGGGGGG+GGG | + | chr3_1:86963286-86963305 | Msa0383920:intron | 70.0% |
| GGACAGGTCTGGGGAGTGGG+GGG | - | chr3_1:86963887-86963906 | None:intergenic | 70.0% | |
| TAGTTTGGGGGGGGGGGGGG+GGG | + | chr3_1:86963287-86963306 | Msa0383920:intron | 75.0% | |
| ! | AGTTTGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963288-86963307 | Msa0383920:intron | 80.0% |
| ! | GGGGAGGGGTGGGGTGGGGT+GGG | + | chr3_1:86963317-86963336 | Msa0383920:intron | 80.0% |
| ! | GGGAGGGGTGGGGTGGGGTG+GGG | + | chr3_1:86963318-86963337 | Msa0383920:intron | 80.0% |
| ! | GTTTGGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963289-86963308 | Msa0383920:intron | 85.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963290-86963309 | Msa0383920:intron | 85.0% |
| ! | GGGGGGGGGAGGGGTGGGGT+GGG | + | chr3_1:86963312-86963331 | Msa0383920:intron | 85.0% |
| ! | GGGGGGGGAGGGGTGGGGTG+GGG | + | chr3_1:86963313-86963332 | Msa0383920:intron | 85.0% |
| ! | GGGGGAGGGGTGGGGTGGGG+TGG | + | chr3_1:86963316-86963335 | Msa0383920:intron | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963291-86963310 | Msa0383920:intron | 90.0% |
| ! | GGGGGGGGGGGGGGAGGGGT+GGG | + | chr3_1:86963307-86963326 | Msa0383920:intron | 90.0% |
| ! | GGGGGGGGGGGGGAGGGGTG+GGG | + | chr3_1:86963308-86963327 | Msa0383920:intron | 90.0% |
| ! | GGGGGGGGGGAGGGGTGGGG+TGG | + | chr3_1:86963311-86963330 | Msa0383920:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:86963292-86963311 | Msa0383920:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGGA+GGG | + | chr3_1:86963302-86963321 | Msa0383920:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGAG+GGG | + | chr3_1:86963303-86963322 | Msa0383920:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGAGGGG+TGG | + | chr3_1:86963306-86963325 | Msa0383920:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 86957661 | 86965403 | 86957661 | ID=Msa0383920;Name=Msa0383920 |
| chr3_1 | mRNA | 86957661 | 86965403 | 86957661 | ID=Msa0383920-mRNA-1;Parent=Msa0383920;Name=Msa0383920-mRNA-1;_AED=0.15;_eAED=0.15;_QI=182|1|1|1|1|1|16|383|596 |
| chr3_1 | exon | 86957661 | 86957851 | 86957661 | ID=Msa0383920-mRNA-1:exon:23078;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86957941 | 86958092 | 86957941 | ID=Msa0383920-mRNA-1:exon:23079;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86958190 | 86958367 | 86958190 | ID=Msa0383920-mRNA-1:exon:23080;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86958469 | 86958687 | 86958469 | ID=Msa0383920-mRNA-1:exon:23081;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86959177 | 86959257 | 86959177 | ID=Msa0383920-mRNA-1:exon:23082;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86959792 | 86959875 | 86959792 | ID=Msa0383920-mRNA-1:exon:23083;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86959994 | 86960098 | 86959994 | ID=Msa0383920-mRNA-1:exon:23084;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86961568 | 86961746 | 86961568 | ID=Msa0383920-mRNA-1:exon:23085;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86962239 | 86962323 | 86962239 | ID=Msa0383920-mRNA-1:exon:23086;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86962397 | 86962583 | 86962397 | ID=Msa0383920-mRNA-1:exon:23087;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86962724 | 86962793 | 86962724 | ID=Msa0383920-mRNA-1:exon:23088;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86963752 | 86963821 | 86963752 | ID=Msa0383920-mRNA-1:exon:23089;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86964095 | 86964184 | 86964095 | ID=Msa0383920-mRNA-1:exon:23090;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86964447 | 86964515 | 86964447 | ID=Msa0383920-mRNA-1:exon:23091;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86964721 | 86964822 | 86964721 | ID=Msa0383920-mRNA-1:exon:23092;Parent=Msa0383920-mRNA-1 |
| chr3_1 | exon | 86964910 | 86965403 | 86964910 | ID=Msa0383920-mRNA-1:exon:23093;Parent=Msa0383920-mRNA-1 |
| chr3_1 | five_prime_UTR | 86957661 | 86957842 | 86957661 | ID=Msa0383920-mRNA-1:five_prime_utr;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86957843 | 86957851 | 86957843 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86957941 | 86958092 | 86957941 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86958190 | 86958367 | 86958190 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86958469 | 86958687 | 86958469 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86959177 | 86959257 | 86959177 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86959792 | 86959875 | 86959792 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86959994 | 86960098 | 86959994 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86961568 | 86961746 | 86961568 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86962239 | 86962323 | 86962239 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86962397 | 86962583 | 86962397 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86962724 | 86962793 | 86962724 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86963752 | 86963821 | 86963752 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86964095 | 86964184 | 86964095 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86964447 | 86964515 | 86964447 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86964721 | 86964822 | 86964721 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | CDS | 86964910 | 86965020 | 86964910 | ID=Msa0383920-mRNA-1:cds;Parent=Msa0383920-mRNA-1 |
| chr3_1 | three_prime_UTR | 86965021 | 86965403 | 86965021 | ID=Msa0383920-mRNA-1:three_prime_utr;Parent=Msa0383920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
