AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0384470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0384470 MtrunA17_Chr3g0141901 99.749 399 1 0 1 399 1 399 0.0 810
Msa0384470 MtrunA17_Chr3g0145011 91.139 395 35 0 5 399 8 402 0.0 745
Msa0384470 MtrunA17_Chr4g0050561 48.603 358 169 2 24 380 58 401 6.93e-112 333
Msa0384470 MtrunA17_Chr8g0345461 47.988 323 167 1 71 392 100 422 3.24e-111 332
Msa0384470 MtrunA17_Chr1g0200081 47.988 323 166 2 71 392 110 431 1.93e-109 328
Msa0384470 MtrunA17_Chr1g0182711 45.251 358 196 0 28 385 80 437 5.32e-106 320
Msa0384470 MtrunA17_Chr7g0262801 46.154 364 192 2 22 385 77 436 2.51e-105 318
Msa0384470 MtrunA17_Chr4g0014731 41.371 394 200 5 28 392 32 423 9.80e-98 298
Msa0384470 MtrunA17_Chr1g0192151 45.872 327 172 2 70 392 97 422 2.07e-97 297
Msa0384470 MtrunA17_Chr3g0108321 45.907 281 152 0 35 315 58 338 8.56e-88 270
Msa0384470 MtrunA17_Chr1g0180791 45.652 230 121 2 135 362 477 704 5.70e-62 213
Msa0384470 MtrunA17_Chr1g0180791 43.882 237 130 2 136 372 205 438 1.88e-58 203
Msa0384470 MtrunA17_Chr7g0264521 45.217 230 122 2 135 362 478 705 1.02e-60 210
Msa0384470 MtrunA17_Chr7g0264521 43.882 237 130 2 136 372 206 439 5.08e-58 202
Msa0384470 MtrunA17_Chr2g0327121 45.217 230 122 2 135 362 479 706 1.72e-60 209
Msa0384470 MtrunA17_Chr2g0327121 43.038 237 132 1 136 372 207 440 3.17e-55 194
Msa0384470 MtrunA17_Chr8g0388371 42.248 258 140 3 136 385 404 660 2.69e-57 201
Msa0384470 MtrunA17_Chr7g0217421 38.211 246 151 1 135 380 38 282 4.79e-55 186
Msa0384470 MtrunA17_Chr3g0143721 37.959 245 151 1 136 380 249 492 1.06e-53 189
Msa0384470 MtrunA17_Chr2g0331161 37.979 287 163 3 92 378 385 656 1.20e-53 191
Msa0384470 MtrunA17_Chr4g0052411 40.870 230 135 1 136 365 229 457 7.74e-53 187
Msa0384470 MtrunA17_Chr2g0297281 40.969 227 133 1 136 362 286 511 1.95e-52 186
Msa0384470 MtrunA17_Chr6g0476861 41.935 248 140 3 136 380 197 443 2.06e-52 185
Msa0384470 MtrunA17_Chr8g0362771 40.650 246 143 2 135 380 236 478 2.63e-52 186
Msa0384470 MtrunA17_Chr7g0255651 34.062 320 195 4 44 362 204 508 9.49e-52 182
Msa0384470 MtrunA17_Chr7g0255651 30.288 208 139 3 159 362 36 241 6.23e-23 100
Msa0384470 MtrunA17_Chr7g0260601 41.129 248 142 3 136 380 240 486 9.91e-52 184
Msa0384470 MtrunA17_Chr3g0135721 34.358 358 209 7 14 360 102 444 4.87e-51 182
Msa0384470 MtrunA17_Chr3g0094871 37.903 248 151 2 135 380 10 256 1.28e-50 176
Msa0384470 MtrunA17_Chr7g0248361 41.129 248 142 3 136 380 192 438 1.66e-50 179
Msa0384470 MtrunA17_Chr6g0456351 36.170 282 172 4 102 379 281 558 1.19e-49 177
Msa0384470 MtrunA17_Chr5g0429571 40.000 250 142 4 135 379 312 558 1.36e-49 179
Msa0384470 MtrunA17_Chr1g0158881 43.111 225 121 3 137 360 330 548 2.18e-49 178
Msa0384470 MtrunA17_Chr7g0255721 34.014 294 189 4 105 396 655 945 2.99e-49 179
Msa0384470 MtrunA17_Chr7g0255721 35.931 231 130 4 139 362 389 608 1.37e-31 127
Msa0384470 MtrunA17_Chr3g0104211 38.889 252 142 5 135 379 303 549 1.64e-48 176
Msa0384470 MtrunA17_Chr3g0135761 33.240 358 214 7 13 360 100 442 3.04e-48 174
Msa0384470 MtrunA17_Chr4g0033451 40.650 246 133 5 135 372 379 619 7.69e-48 175
Msa0384470 MtrunA17_Chr7g0255691 34.058 276 180 1 121 394 271 546 2.75e-47 169
Msa0384470 MtrunA17_Chr7g0255691 39.111 225 131 3 141 361 22 244 3.81e-37 141
Msa0384470 MtrunA17_Chr4g0004121 39.844 256 131 9 122 362 224 471 3.10e-47 169
Msa0384470 MtrunA17_Chr4g0031821 39.113 248 147 3 136 380 320 566 3.29e-47 172
Msa0384470 MtrunA17_Chr3g0129971 38.911 257 146 5 131 379 291 544 3.77e-47 172
Msa0384470 MtrunA17_Chr2g0316851 38.750 240 136 4 138 371 596 830 1.16e-46 171
Msa0384470 MtrunA17_Chr2g0277831 39.301 229 134 2 135 361 532 757 1.25e-46 171
Msa0384470 MtrunA17_Chr2g0277831 38.367 245 146 3 134 374 241 484 8.95e-43 159
Msa0384470 MtrunA17_Chr4g0052271 33.566 286 165 7 135 399 118 399 3.34e-46 163
Msa0384470 MtrunA17_Chr7g0255641 35.628 247 156 2 136 380 658 903 4.09e-46 169
Msa0384470 MtrunA17_Chr7g0255641 36.620 213 119 6 175 376 432 639 6.12e-29 119
Msa0384470 MtrunA17_Chr4g0043381 36.614 254 148 2 132 375 833 1083 5.62e-46 169
Msa0384470 MtrunA17_Chr4g0043381 24.167 240 156 6 164 378 579 817 9.64e-11 63.9
Msa0384470 MtrunA17_Chr3g0127401 38.115 244 143 4 122 362 67 305 1.35e-45 161
Msa0384470 MtrunA17_Chr7g0255901 38.095 231 138 5 135 362 638 866 2.72e-45 167
Msa0384470 MtrunA17_Chr5g0432631 40.773 233 129 4 135 366 228 452 1.54e-44 165
Msa0384470 MtrunA17_Chr3g0127431 37.295 244 145 4 122 362 70 308 3.56e-44 158
Msa0384470 MtrunA17_Chr1g0204031 39.506 243 132 7 133 367 551 786 4.05e-44 164
Msa0384470 MtrunA17_Chr1g0202371 38.696 230 132 5 136 362 397 620 4.54e-44 162
Msa0384470 MtrunA17_Chr5g0397121 36.047 258 150 6 133 384 507 755 7.66e-44 162
Msa0384470 MtrunA17_Chr6g0459561 36.111 252 148 8 118 364 365 608 8.72e-44 161
Msa0384470 MtrunA17_Chr2g0321241 39.485 233 126 10 128 355 125 347 1.09e-43 157
Msa0384470 MtrunA17_Chr4g0026631 37.705 244 138 9 128 366 120 354 3.00e-43 156
Msa0384470 MtrunA17_Chr8g0387641 35.827 254 151 5 135 385 520 764 4.45e-43 160
Msa0384470 MtrunA17_Chr4g0038101 37.288 236 137 6 133 362 716 946 4.58e-43 160
Msa0384470 MtrunA17_Chr2g0327231 44.643 168 93 0 129 296 339 506 1.65e-42 155
Msa0384470 MtrunA17_Chr2g0327231 45.556 90 45 1 136 225 153 238 9.77e-19 87.8
Msa0384470 MtrunA17_Chr1g0195741 36.797 231 137 5 136 362 938 1163 8.79e-42 157
Msa0384470 MtrunA17_Chr1g0195731 37.118 229 139 4 136 362 934 1159 1.19e-41 157
Msa0384470 MtrunA17_Chr7g0246111 39.744 234 126 7 135 362 211 435 2.62e-41 152
Msa0384470 MtrunA17_Chr6g0462581 38.397 237 132 8 133 362 494 723 5.44e-41 154
Msa0384470 MtrunA17_Chr3g0116131 36.889 225 133 5 136 356 902 1121 6.27e-41 154
Msa0384470 MtrunA17_Chr1g0202381 37.815 238 133 7 133 362 462 692 1.46e-40 153
Msa0384470 MtrunA17_Chr5g0432641 37.719 228 135 3 139 366 194 414 3.88e-40 151
Msa0384470 MtrunA17_Chr3g0086411 35.918 245 136 4 135 361 214 455 1.50e-39 147
Msa0384470 MtrunA17_Chr3g0086411 34.722 144 88 2 224 361 7 150 1.01e-16 82.0
Msa0384470 MtrunA17_Chr3g0086401 37.247 247 132 4 135 361 384 627 1.27e-37 144
Msa0384470 MtrunA17_Chr3g0086401 39.151 212 111 6 148 349 106 309 4.22e-33 131
Msa0384470 MtrunA17_Chr6g0459541 32.117 274 150 8 118 362 25 291 1.78e-37 139
Msa0384470 MtrunA17_Chr8g0357301 34.694 245 146 4 144 379 477 716 3.22e-37 144
Msa0384470 MtrunA17_Chr3g0135781 44.512 164 87 2 135 298 54 213 1.35e-36 132
Msa0384470 MtrunA17_Chr4g0047411 33.579 271 158 7 127 381 166 430 2.83e-35 137
Msa0384470 MtrunA17_Chr2g0289231 36.957 230 128 6 136 356 297 518 7.90e-34 132
Msa0384470 MtrunA17_Chr1g0168321 40.936 171 98 2 213 380 203 373 1.10e-30 122
Msa0384470 MtrunA17_Chr6g0459551 32.759 232 141 7 118 345 85 305 6.57e-29 117
Msa0384470 MtrunA17_Chr5g0432391 32.955 176 114 2 214 389 81 252 2.21e-25 107
Msa0384470 MtrunA17_Chr4g0062081 53.165 79 36 1 139 216 10 88 6.39e-24 95.1
Msa0384470 MtrunA17_Chr1g0190401 30.918 207 138 2 137 342 681 883 2.72e-23 102
Msa0384470 MtrunA17_Chr6g0459531 26.333 300 168 10 118 397 50 316 1.57e-20 91.7
Msa0384470 MtrunA17_Chr5g0404651 38.562 153 75 7 163 307 241 382 1.35e-15 78.6
Msa0384470 MtrunA17_Chr6g0450161 33.553 152 93 5 172 322 362 506 1.95e-15 78.2
Msa0384470 MtrunA17_Chr2g0315911 26.690 281 184 9 126 397 190 457 1.05e-14 75.5
Msa0384470 MtrunA17_Chr5g0404291 35.172 145 86 5 172 315 387 524 1.73e-14 75.1
Msa0384470 MtrunA17_Chr4g0039781 29.944 177 104 6 159 322 343 512 6.87e-14 73.6
Msa0384470 MtrunA17_Chr2g0315971 31.414 191 116 7 149 333 484 665 2.78e-13 71.6
Msa0384470 MtrunA17_Chr2g0315971 30.952 168 103 5 149 311 208 367 4.00e-13 71.2
Msa0384470 MtrunA17_Chr2g0315921 31.977 172 101 7 163 329 236 396 6.36e-13 70.1
Msa0384470 MtrunA17_Chr6g0452361 31.053 190 114 7 163 345 21 200 1.23e-12 67.8
Msa0384470 MtrunA17_Chr2g0316041 29.787 188 116 7 149 329 153 331 3.58e-12 67.8
Msa0384470 MtrunA17_Chr8g0372701 32.828 198 98 11 153 333 239 418 1.40e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0384470 AT5G43010.1 94.236 399 23 0 1 399 1 399 0.0 769
Msa0384470 AT1G45000.1 93.985 399 24 0 1 399 1 399 0.0 768
Msa0384470 AT1G45000.2 71.679 399 49 4 1 399 1 335 0.0 540
Msa0384470 AT5G20000.1 48.883 358 168 2 24 380 60 403 9.17e-113 336
Msa0384470 AT5G19990.1 48.603 358 169 2 24 380 60 403 2.41e-112 335
Msa0384470 AT5G19990.3 48.603 358 169 2 24 380 60 403 2.41e-112 335
Msa0384470 AT1G53750.1 47.988 323 167 1 71 392 100 422 7.53e-111 332
Msa0384470 AT5G19990.2 49.849 331 165 1 51 380 15 345 1.34e-110 329
Msa0384470 AT4G29040.1 45.251 358 196 0 28 385 77 434 3.28e-106 320
Msa0384470 AT2G20140.1 45.251 358 196 0 28 385 77 434 3.54e-106 320
Msa0384470 AT1G53780.3 49.045 314 159 1 84 396 284 597 1.40e-104 321
Msa0384470 AT1G53780.1 49.045 314 159 1 84 396 285 598 1.49e-104 321
Msa0384470 AT1G53780.4 49.045 314 159 1 84 396 285 598 1.49e-104 321
Msa0384470 AT1G53780.2 49.045 314 159 1 84 396 306 619 2.99e-104 321
Msa0384470 AT5G58290.1 42.733 344 197 0 35 378 51 394 2.31e-100 304
Msa0384470 AT3G05530.1 45.260 327 174 2 70 392 98 423 1.05e-95 293
Msa0384470 AT1G09100.1 45.260 327 174 2 70 392 97 422 5.76e-95 291
Msa0384470 AT3G53230.1 44.348 230 124 2 135 362 477 704 7.75e-61 211
Msa0384470 AT3G53230.1 43.882 237 130 2 136 372 205 438 4.59e-57 200
Msa0384470 AT5G03340.1 44.783 230 123 2 135 362 476 703 9.66e-61 210
Msa0384470 AT5G03340.1 41.603 262 148 3 136 397 204 460 6.93e-58 202
Msa0384470 AT3G09840.1 42.578 256 138 4 135 387 476 725 1.04e-58 204
Msa0384470 AT3G09840.1 43.697 238 131 2 135 372 203 437 4.64e-58 203
Msa0384470 AT5G42270.1 40.000 245 146 1 136 380 247 490 6.59e-56 196
Msa0384470 AT1G50250.1 39.024 246 149 1 135 380 258 502 7.60e-55 193
Msa0384470 AT4G23940.1 40.551 254 142 3 136 381 427 679 8.47e-54 192
Msa0384470 AT2G30950.1 40.343 233 138 1 136 368 224 455 2.14e-53 189
Msa0384470 AT2G30950.2 40.343 233 138 1 136 368 224 455 2.14e-53 189
Msa0384470 AT2G30950.3 40.343 233 138 1 136 368 224 455 2.14e-53 189
Msa0384470 AT2G30950.4 40.343 233 138 1 136 368 228 459 2.69e-53 188
Msa0384470 AT3G47060.1 40.000 250 142 4 135 379 321 567 7.53e-53 188
Msa0384470 AT3G16290.1 40.164 244 145 1 135 378 406 648 8.45e-53 189
Msa0384470 AT1G06430.1 39.912 228 136 1 135 362 216 442 6.37e-52 184
Msa0384470 AT1G06430.3 39.912 228 136 1 135 362 216 442 6.37e-52 184
Msa0384470 AT1G06430.2 39.912 228 136 1 135 362 216 442 6.37e-52 184
Msa0384470 AT3G56690.1 41.228 228 129 2 136 361 721 945 1.30e-51 186
Msa0384470 AT3G56690.1 40.870 230 129 4 139 366 385 609 7.24e-43 160
Msa0384470 AT5G58870.1 39.921 253 144 4 132 379 322 571 1.66e-51 184
Msa0384470 AT5G15250.1 40.773 233 137 1 136 368 221 452 1.10e-50 181
Msa0384470 AT5G53170.1 43.556 225 120 3 137 360 360 578 1.44e-50 182
Msa0384470 AT3G02450.1 42.857 217 119 2 165 379 359 572 4.46e-49 176
Msa0384470 AT2G26140.1 33.894 357 212 9 13 360 103 444 4.81e-49 177
Msa0384470 AT2G34560.1 37.238 239 144 4 135 372 99 332 1.59e-48 169
Msa0384470 AT2G34560.2 37.238 239 144 4 135 372 108 341 1.80e-48 169
Msa0384470 AT1G05910.1 40.000 250 139 4 135 377 377 622 1.63e-47 174
Msa0384470 AT5G64580.1 39.689 257 144 5 131 379 308 561 1.90e-47 173
Msa0384470 AT5G08470.1 35.106 282 155 3 113 372 796 1071 3.48e-47 173
Msa0384470 AT5G08470.3 35.106 282 155 3 113 372 787 1062 3.74e-47 173
Msa0384470 AT5G53540.1 39.834 241 134 5 125 362 76 308 3.93e-47 166
Msa0384470 AT5G15250.2 37.109 256 137 2 136 368 221 475 5.36e-47 168
Msa0384470 AT1G07510.1 40.726 248 143 3 136 380 324 570 6.15e-47 172
Msa0384470 AT1G80350.1 36.424 302 153 10 127 397 228 521 9.96e-47 167
Msa0384470 AT2G29080.1 40.891 247 143 2 136 380 319 564 2.38e-46 170
Msa0384470 AT3G01610.1 39.662 237 128 3 137 362 231 463 1.02e-45 168
Msa0384470 AT3G01610.1 40.175 229 130 5 135 361 524 747 4.98e-42 157
Msa0384470 AT3G01610.2 39.662 237 128 3 137 362 231 463 1.16e-45 168
Msa0384470 AT3G01610.2 40.175 229 130 5 135 361 524 747 5.64e-42 157
Msa0384470 AT4G27680.1 38.115 244 143 4 122 362 67 305 1.26e-45 162
Msa0384470 AT2G03670.1 30.421 309 209 3 89 394 239 544 1.64e-45 166
Msa0384470 AT2G03670.1 35.341 249 151 4 134 373 14 261 1.96e-40 152
Msa0384470 AT1G03000.1 35.955 267 149 7 135 381 654 918 8.02e-44 163
Msa0384470 AT1G50140.2 37.712 236 136 6 133 362 684 914 2.25e-43 162
Msa0384470 AT1G50140.5 37.712 236 136 6 133 362 684 914 2.25e-43 162
Msa0384470 AT1G50140.3 37.712 236 136 6 133 362 706 936 2.57e-43 162
Msa0384470 AT1G50140.1 37.712 236 136 6 133 362 706 936 2.57e-43 162
Msa0384470 AT1G50140.4 37.712 236 136 6 133 362 706 936 2.57e-43 162
Msa0384470 AT3G15120.2 36.585 246 143 5 138 376 728 967 2.96e-43 162
Msa0384470 AT3G15120.1 36.585 246 143 5 138 376 718 957 3.04e-43 162
Msa0384470 AT2G27600.1 40.175 229 126 9 128 353 122 342 1.05e-42 155
Msa0384470 AT3G27120.1 35.600 250 148 8 118 362 383 624 2.57e-42 157
Msa0384470 AT2G45500.4 35.315 286 150 11 135 397 79 352 4.29e-42 151
Msa0384470 AT2G45500.3 35.315 286 150 11 135 397 79 352 4.29e-42 151
Msa0384470 AT1G02890.1 38.095 231 134 5 136 362 941 1166 4.94e-42 158
Msa0384470 AT1G64110.5 36.803 269 153 9 135 399 515 770 1.43e-41 156
Msa0384470 AT1G64110.3 36.803 269 153 9 135 399 515 770 1.43e-41 156
Msa0384470 AT1G64110.2 38.793 232 132 7 135 362 517 742 1.54e-41 156
Msa0384470 AT1G64110.4 38.793 232 132 7 135 362 517 742 1.54e-41 156
Msa0384470 AT1G64110.1 36.803 269 153 9 135 399 512 767 1.55e-41 156
Msa0384470 AT2G03670.2 35.341 249 151 4 134 373 14 261 1.73e-41 152
Msa0384470 AT2G03670.2 30.851 188 126 2 89 275 239 423 1.52e-23 102
Msa0384470 AT4G02480.1 37.555 229 138 4 136 362 960 1185 4.99e-41 155
Msa0384470 AT2G45500.2 35.315 286 150 11 135 397 212 485 6.15e-41 151
Msa0384470 AT2G45500.1 35.315 286 150 11 135 397 216 489 9.71e-41 150
Msa0384470 AT2G45500.5 35.315 286 150 11 135 397 222 495 1.14e-40 150
Msa0384470 AT3G19740.1 36.017 236 140 6 133 362 696 926 1.48e-40 154
Msa0384470 AT4G28000.3 36.017 236 139 6 133 362 511 740 2.47e-40 153
Msa0384470 AT4G28000.2 36.017 236 139 6 133 362 511 740 3.03e-40 152
Msa0384470 AT4G28000.1 36.017 236 139 6 133 362 509 738 3.42e-40 152
Msa0384470 AT4G24860.1 36.207 232 139 5 135 362 816 1042 2.66e-39 150
Msa0384470 AT4G24860.3 36.207 232 139 5 135 362 814 1040 2.79e-39 150
Msa0384470 AT4G24860.4 36.207 232 139 5 135 362 789 1015 3.13e-39 150
Msa0384470 AT4G24860.2 36.207 232 139 5 135 362 812 1038 3.81e-39 150
Msa0384470 AT5G52882.1 36.864 236 137 7 133 362 508 737 4.64e-39 149
Msa0384470 AT1G79560.3 35.510 245 144 3 144 379 497 736 6.12e-38 146
Msa0384470 AT1G79560.1 35.510 245 144 3 144 379 497 736 8.88e-38 145
Msa0384470 AT1G79560.2 35.510 245 144 3 144 379 497 736 9.59e-38 145
Msa0384470 AT4G04910.1 32.168 286 162 7 127 383 203 485 1.45e-35 139
Msa0384470 AT4G04180.2 39.130 230 123 6 136 356 311 532 2.78e-34 134
Msa0384470 AT4G04180.1 39.130 230 123 6 136 356 316 537 3.02e-34 134
Msa0384470 AT1G02890.2 34.199 231 115 6 136 362 941 1138 2.52e-29 120
Msa0384470 AT1G62130.2 30.894 246 144 6 136 371 743 972 3.51e-29 120
Msa0384470 AT1G62130.1 30.894 246 144 6 136 371 750 979 4.16e-29 120
Msa0384470 AT5G08470.2 32.308 195 107 2 113 285 796 987 4.39e-24 105
Msa0384470 AT3G04340.1 36.420 162 102 1 159 319 803 964 9.64e-23 101
Msa0384470 AT2G18330.1 34.247 146 88 5 172 316 384 522 1.12e-14 76.3
Msa0384470 AT5G16930.1 30.412 194 121 8 134 322 357 541 4.96e-14 74.3
Msa0384470 AT3G03060.1 31.361 169 102 6 172 333 385 546 1.40e-13 72.8
Msa0384470 AT2G18193.1 32.927 164 97 5 149 307 219 374 1.91e-13 72.0
Msa0384470 AT4G36580.1 32.877 146 90 5 172 316 381 519 5.05e-13 71.2
Msa0384470 AT2G18190.1 31.156 199 97 7 123 307 206 378 9.68e-12 67.0
Msa0384470 AT3G50940.1 35.099 151 81 6 164 307 238 378 2.75e-11 65.5
Msa0384470 AT5G17730.1 35.762 151 83 6 163 307 235 377 3.28e-11 65.1
Msa0384470 AT5G40000.1 31.646 158 87 6 163 307 231 380 7.38e-11 63.9

Find 125 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAGGGTGTTCTCCTTTA+TGG 0.093291 3_1:+87643435 Msa0384470:intron
GCACACTACAATGCTGATTT+TGG 0.166045 3_1:+87645102 Msa0384470:CDS
TCCAATGTACTTATCAATTA+TGG 0.190993 3_1:-87643629 None:intergenic
TTCAGGGTGTTCTCCTTTAT+GGG 0.205114 3_1:+87643436 Msa0384470:intron
CTCAGAGCCATGGATGTTTA+TGG 0.223405 3_1:+87645151 Msa0384470:three_prime_UTR
CAAAATTGTCAGGGGTTTAA+TGG 0.239298 3_1:+87644859 Msa0384470:intron
AAACTTGGCTGAGGTATTTC+TGG 0.278084 3_1:-87645190 None:intergenic
TCCATCCTCGATTGTTCATT+TGG 0.279398 3_1:-87644695 None:intergenic
TGAGATTCAGAGAACGTTAA+TGG 0.286158 3_1:+87643860 Msa0384470:CDS
GAAGTTAGCATCTATATTAC+TGG 0.300744 3_1:-87643499 None:intergenic
GCTTCTTCAGCACAAGGAAT+TGG 0.306204 3_1:+87641202 Msa0384470:CDS
CAGCTTCAGTGCACACATTT+CGG 0.314090 3_1:-87644891 None:intergenic
TAAATATTTAAAAGTAAAAC+TGG 0.334790 3_1:-87645419 None:intergenic
AATCATCGAGTTAAGCATTA+TGG 0.336788 3_1:+87645217 Msa0384470:three_prime_UTR
CTTGATGGCTTTGATCAACT+TGG 0.337954 3_1:+87643897 Msa0384470:CDS
TGAAGTTAGGTCTCACAAAT+TGG 0.360776 3_1:-87641079 None:intergenic
GAGCTGCTTAATCAACTTGA+TGG 0.364985 3_1:+87643882 Msa0384470:CDS
GGTTAATTAGAGAGATGTTT+GGG 0.391291 3_1:+87643662 Msa0384470:CDS
AGATCATCGGCGAAGTTCTC+AGG 0.394815 3_1:+87641806 Msa0384470:CDS
ACGAGGAAGAGCCCGCATTA+TGG 0.402274 3_1:-87642339 None:intergenic
CCTTTATGGGCCTCCTGGTA+CGG 0.402765 3_1:+87643449 Msa0384470:CDS
GTGGTTTATCTGATCAGATC+AGG 0.404868 3_1:+87642582 Msa0384470:CDS
CCTGAGCTCTTTCTTAGAGT+TGG 0.404934 3_1:+87642641 Msa0384470:CDS
CGAAATGTGTGCACTGAAGC+TGG 0.406372 3_1:+87644892 Msa0384470:CDS
AGCAGAGTAACTAATATTAC+CGG 0.407884 3_1:-87642555 None:intergenic
TGCAACATATTGTACACAAC+TGG 0.415415 3_1:-87642524 None:intergenic
GTTCTCCTTTATGGGCCTCC+TGG 0.416124 3_1:+87643444 Msa0384470:CDS
TGGTTGTGGCGATGCAAAAT+CGG 0.417057 3_1:-87641118 None:intergenic
CTGTCTCTATTGTAGAAGTT+CGG 0.418356 3_1:+87645362 Msa0384470:three_prime_UTR
GTTGAGAAGGGTGTGAAGTT+AGG 0.420592 3_1:-87641092 None:intergenic
TACTTTGGTACCAGGCTGTA+AGG 0.428624 3_1:+87645046 Msa0384470:intron
ACTCGATGATTTGACAAACT+TGG 0.432155 3_1:-87645205 None:intergenic
AGGTTAATTAGAGAGATGTT+TGG 0.434118 3_1:+87643661 Msa0384470:CDS
CGGGTAAAACATTGTTGGCT+AGG 0.437652 3_1:+87643469 Msa0384470:CDS
CGGCAGCCAACCACATATCT+AGG 0.446488 3_1:-87642251 None:intergenic
AAGAATTAGTAATAATAGAC+TGG 0.451397 3_1:-87641046 None:intergenic
CCCATATTAAAACTAGAATC+TGG 0.451876 3_1:-87645268 None:intergenic
CTTCCAGGACGTAGGAGAGC+AGG 0.453187 3_1:-87644644 None:intergenic
ATTAGTTACTCTGCTGTTGG+TGG 0.454165 3_1:+87642563 Msa0384470:CDS
AAGAGCTCAGGATTCATTAG+AGG 0.454617 3_1:-87642629 None:intergenic
TGAAGTCTCTTCAAAGTGTC+GGG 0.456402 3_1:+87641782 Msa0384470:CDS
TAAGCATTATGGCAGCCGTC+CGG 0.460975 3_1:+87645228 Msa0384470:three_prime_UTR
CTCGATTGTTCATTTGGCAA+TGG 0.462098 3_1:-87644689 None:intergenic
CTGATCAGATCAGGGAATTG+AGG 0.465892 3_1:+87642591 Msa0384470:CDS
CCGTACCAGGAGGCCCATAA+AGG 0.466426 3_1:-87643449 None:intergenic
TCTCCTACGTCCTGGAAGAT+TGG 0.473304 3_1:+87644649 Msa0384470:CDS
TGATCAGATCAGGGAATTGA+GGG 0.474976 3_1:+87642592 Msa0384470:CDS
CTTTATGGGCCTCCTGGTAC+GGG 0.478620 3_1:+87643450 Msa0384470:CDS
AAGCATTATGGCAGCCGTCC+GGG 0.486326 3_1:+87645229 Msa0384470:three_prime_UTR
AGTAATAATAGACTGGTTTG+TGG 0.493644 3_1:-87641039 None:intergenic
CTGCCGGAGTAAAGTGGATA+AGG 0.495754 3_1:+87642268 Msa0384470:CDS
ATTCTTAAGATCCATGCTGC+TGG 0.497593 3_1:+87644719 Msa0384470:CDS
CTAGATATGTGGTTGGCTGC+CGG 0.503700 3_1:+87642252 Msa0384470:CDS
GGATAGTACATGCCATTGCC+CGG 0.506832 3_1:-87645247 None:intergenic
TATGGCAGCCGTCCGGGCAA+TGG 0.509453 3_1:+87645235 Msa0384470:three_prime_UTR
AGTACATTGGAGAAAGTGCC+AGG 0.511018 3_1:+87643641 Msa0384470:CDS
GTTGTAGGTTAAAATGATCA+TGG 0.511658 3_1:+87644595 Msa0384470:intron
AATATTAGTTACTCTGCTGT+TGG 0.513513 3_1:+87642560 Msa0384470:CDS
TTGGAATCCAGAGTTCGATC+TGG 0.519146 3_1:+87641221 Msa0384470:CDS
TTGAAGTCTCTTCAAAGTGT+CGG 0.523406 3_1:+87641781 Msa0384470:CDS
ACTGAAACGGCGACCACCAA+TGG 0.525549 3_1:-87643817 None:intergenic
GCCATAATTGATAAGTACAT+TGG 0.529655 3_1:+87643628 Msa0384470:CDS
GACTGCGTTACGGCGTCGAA+CGG 0.529884 3_1:-87641162 None:intergenic
GATACTCGGCGACTGCGTTA+CGG 0.530790 3_1:-87641172 None:intergenic
TATAGATGCTAACTTCCTAA+AGG 0.531647 3_1:+87643506 Msa0384470:CDS
GGTGGTCGCCGTTTCAGTGA+GGG 0.532776 3_1:+87643822 Msa0384470:CDS
CAAAGTGTCGGGCAGATCAT+CGG 0.536048 3_1:+87641793 Msa0384470:CDS
AGAGCAGGGTCAAGTACATC+CGG 0.536767 3_1:-87644629 None:intergenic
CACTTGTTCCCTCACTGAAA+CGG 0.538183 3_1:-87643830 None:intergenic
ATACCTTCATAAAATCTTCG+TGG 0.538695 3_1:-87644951 None:intergenic
GACCCTGCTCTCCTACGTCC+TGG 0.540855 3_1:+87644641 Msa0384470:CDS
TGGCTTTGATCAACTTGGAA+AGG 0.541904 3_1:+87643902 Msa0384470:CDS
AGACAAACCAGATCGAACTC+TGG 0.546257 3_1:-87641228 None:intergenic
GTAACGCAGTCGCCGAGTAT+CGG 0.548074 3_1:+87641174 Msa0384470:CDS
AAGAAGCTTCTTCCGATACT+CGG 0.559754 3_1:-87641186 None:intergenic
GACAACACTCACCATAATGC+GGG 0.561526 3_1:+87642328 Msa0384470:CDS
ATGGATGAGATCGATGCCAT+TGG 0.561839 3_1:+87643801 Msa0384470:CDS
AGTTGGAATTAAACCTCCCA+AGG 0.562840 3_1:+87642658 Msa0384470:CDS
TTGTGAAATTCTCAGAGCCA+TGG 0.563523 3_1:+87645141 Msa0384470:three_prime_UTR
TGGTACGGGTAAAACATTGT+TGG 0.568472 3_1:+87643464 Msa0384470:CDS
AGTACATGCCATTGCCCGGA+CGG 0.573872 3_1:-87645243 None:intergenic
CTCTGATAACTTACTTCACG+AGG 0.574369 3_1:-87642356 None:intergenic
GCGTCGAACGGCATCTTCTG+TGG 0.576076 3_1:-87641150 None:intergenic
ATCTTCTGTGGTGTCAGACA+TGG 0.578143 3_1:-87641138 None:intergenic
CCAACTCTAAGAAAGAGCTC+AGG 0.578764 3_1:-87642641 None:intergenic
TGATTTGACAAACTTGGCTG+AGG 0.578779 3_1:-87645199 None:intergenic
TGGGTATGCACGTGATCACC+AGG 0.579889 3_1:+87643681 Msa0384470:CDS
GGGTAAAACATTGTTGGCTA+GGG 0.581451 3_1:+87643470 Msa0384470:CDS
GCAAAATCGGAAAGTTGAGA+AGG 0.583734 3_1:-87641105 None:intergenic
TAATATGGGAACTTGGCGAA+CGG 0.585920 3_1:+87645282 Msa0384470:three_prime_UTR
GCCAAATGAACAATCGAGGA+TGG 0.587953 3_1:+87644694 Msa0384470:CDS
TTCCAGGACGTAGGAGAGCA+GGG 0.588103 3_1:-87644643 None:intergenic
GATGAGATCGATGCCATTGG+TGG 0.588964 3_1:+87643804 Msa0384470:CDS
GAACTTGGCGAACGGTAAAG+AGG 0.589326 3_1:+87645290 Msa0384470:three_prime_UTR
GATCATGGCAACAAACCGAC+CGG 0.591128 3_1:+87644610 Msa0384470:CDS
GCTTAGCAATTCCAGCAGCA+TGG 0.593716 3_1:-87644730 None:intergenic
TTTCCTTATCCACTTTACTC+CGG 0.594645 3_1:-87642271 None:intergenic
GGCTGTAAGGAAATTGAATG+AGG 0.596802 3_1:+87645059 Msa0384470:intron
TGGTTTATCTGATCAGATCA+GGG 0.600189 3_1:+87642583 Msa0384470:CDS
GGTTGGCTGCCGGAGTAAAG+TGG 0.602171 3_1:+87642262 Msa0384470:CDS
TTACAGCGTTCATTGTCAAG+AGG 0.602525 3_1:-87641829 None:intergenic
GTGATTGTTAAAGCAAGCAG+TGG 0.603375 3_1:+87642227 Msa0384470:intron
AAGCAGTGGTCCTAGATATG+TGG 0.605838 3_1:+87642241 Msa0384470:CDS
TGCACTGCCATAAACATCCA+TGG 0.606653 3_1:-87645158 None:intergenic
TGTGGTGTCAGACATGGTTG+TGG 0.620019 3_1:-87641132 None:intergenic
TCATATCTATACTAGAGTCA+TGG 0.625411 3_1:+87645386 Msa0384470:three_prime_UTR
GAAAAGTTGATTACCTTGGG+AGG 0.627342 3_1:-87642671 None:intergenic
CAAAATCGGAAAGTTGAGAA+GGG 0.627970 3_1:-87641104 None:intergenic
AATATGTTGCATGAAGATCC+CGG 0.628998 3_1:+87642536 Msa0384470:CDS
GAAGAAGCTTCTTCAGCACA+AGG 0.639220 3_1:+87641196 Msa0384470:CDS
TGACAACACTCACCATAATG+CGG 0.639866 3_1:+87642327 Msa0384470:CDS
AAACATCTCTCTAATTAACC+TGG 0.642963 3_1:-87643659 None:intergenic
TGGTGGTCGCCGTTTCAGTG+AGG 0.645352 3_1:+87643821 Msa0384470:CDS
GCTGCTGGAATTGCTAAGCA+TGG 0.645633 3_1:+87644734 Msa0384470:CDS
ACTTACTTCTGGGACTAGAG+TGG 0.649134 3_1:+87642295 Msa0384470:CDS
CATTGCCAAATGAACAATCG+AGG 0.663453 3_1:+87644690 Msa0384470:CDS
TTAGGTCTCACAAATTGGAA+CGG 0.675913 3_1:-87641074 None:intergenic
GCAGAGTAACTAATATTACC+GGG 0.676463 3_1:-87642554 None:intergenic
CAGGGTCAAGTACATCCGGT+CGG 0.682071 3_1:-87644625 None:intergenic
GGTCTCACAAATTGGAACGG+TGG 0.682537 3_1:-87641071 None:intergenic
TATCCAATCTTCCAGGACGT+AGG 0.685964 3_1:-87644652 None:intergenic
AGTGGTCCTAGATATGTGGT+TGG 0.690114 3_1:+87642245 Msa0384470:CDS
TGAAGCGGTTGTGAAGCTTG+CGG 0.692552 3_1:+87644769 Msa0384470:CDS
TGGTGAAATAGACTATGAAG+CGG 0.697649 3_1:+87644754 Msa0384470:CDS
AGCGGTTGTGAAGCTTGCGG+AGG 0.703737 3_1:+87644772 Msa0384470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATTATTAATTAAAA+GGG - chr3_1:87643162-87643181 None:intergenic 0.0%
!! CAAAAAAAAAAAAATGATAA+TGG - chr3_1:87642032-87642051 None:intergenic 10.0%
!!! CATTATCATTTTTTTTTTTT+TGG + chr3_1:87642030-87642049 Msa0384470:intron 10.0%
!! TAAATATTTAAAAGTAAAAC+TGG - chr3_1:87645422-87645441 None:intergenic 10.0%
!!! TACATGTATTTTAAGAAATT+AGG + chr3_1:87641428-87641447 Msa0384470:intron 15.0%
!!! ACATGTATTTTAAGAAATTA+GGG + chr3_1:87641429-87641448 Msa0384470:intron 15.0%
!!! TTTCCATTTTTGAATAAAAA+AGG - chr3_1:87641607-87641626 None:intergenic 15.0%
!! AAAAAAATTAACTTATCCAT+AGG - chr3_1:87641632-87641651 None:intergenic 15.0%
!! TATCAATCAAGAAAAAAAAA+AGG - chr3_1:87642154-87642173 None:intergenic 15.0%
!!! TGAAAATAAAAAAGTATGAA+AGG - chr3_1:87642718-87642737 None:intergenic 15.0%
!!! TTTCATACTTTTTTATTTTC+AGG + chr3_1:87642717-87642736 Msa0384470:intron 15.0%
!!! ATCATTTTAATTATTTCAGA+CGG + chr3_1:87642785-87642804 Msa0384470:intron 15.0%
!!! AGATTTGACTTTTTTAATTA+GGG + chr3_1:87642958-87642977 Msa0384470:intron 15.0%
!! AAATAAAATTGTTTAGATGA+AGG + chr3_1:87643194-87643213 Msa0384470:intron 15.0%
!! AATAAAATTGTTTAGATGAA+GGG + chr3_1:87643195-87643214 Msa0384470:intron 15.0%
!!! CTTTTATACTAATCTATAAA+GGG - chr3_1:87643259-87643278 None:intergenic 15.0%
!! AAATGTTAAAGTTAAAAGTA+TGG - chr3_1:87643393-87643412 None:intergenic 15.0%
!! ATTTGATTATATAAACCTAT+AGG - chr3_1:87643732-87643751 None:intergenic 15.0%
!! AAGAATTAGTAATAATAGAC+TGG - chr3_1:87641049-87641068 None:intergenic 20.0%
!!! TGTCCTTTTTTATTCAAAAA+TGG + chr3_1:87641601-87641620 Msa0384470:intron 20.0%
!! TAAGTATTTAACTCCATAAT+CGG - chr3_1:87641666-87641685 None:intergenic 20.0%
!! ATTATGGAGTTAAATACTTA+TGG + chr3_1:87641666-87641685 Msa0384470:intron 20.0%
!! TAATGTTAGTAACATGAAAA+TGG - chr3_1:87641864-87641883 None:intergenic 20.0%
!!! TTCTTTTTTCTAAAAACACT+TGG + chr3_1:87642451-87642470 Msa0384470:intron 20.0%
!! TTGATTTCAAAGATTTGTAT+TGG + chr3_1:87642755-87642774 Msa0384470:intron 20.0%
!!! AAGTCAAATCTCTTTAAAAT+AGG - chr3_1:87642949-87642968 None:intergenic 20.0%
!!! GAGATTTGACTTTTTTAATT+AGG + chr3_1:87642957-87642976 Msa0384470:intron 20.0%
!!! GCTTTTATACTAATCTATAA+AGG - chr3_1:87643260-87643279 None:intergenic 20.0%
!! TTATTTCCAAAATACAAACA+TGG - chr3_1:87643972-87643991 None:intergenic 20.0%
!! ATAGATTTACAAAGAAAAGT+AGG - chr3_1:87644172-87644191 None:intergenic 20.0%
!!! TACTTTTCTTTGTAAATCTA+TGG + chr3_1:87644171-87644190 Msa0384470:intron 20.0%
!!! ATCAACTTTTTTGAAAGATA+TGG + chr3_1:87644409-87644428 Msa0384470:intron 20.0%
!!! TCAACTTTTTTGAAAGATAT+GGG + chr3_1:87644410-87644429 Msa0384470:intron 20.0%
! AATTTCGAGAATAAGTGAAA+AGG - chr3_1:87641279-87641298 None:intergenic 25.0%
! TTCTCGAAATTCATAGTATT+AGG + chr3_1:87641288-87641307 Msa0384470:intron 25.0%
! TCTCGAAATTCATAGTATTA+GGG + chr3_1:87641289-87641308 Msa0384470:intron 25.0%
! CCTAATTTAAGCAATTGATA+GGG - chr3_1:87641362-87641381 None:intergenic 25.0%
! ACCTAATTTAAGCAATTGAT+AGG - chr3_1:87641363-87641382 None:intergenic 25.0%
!!! TCATTGAGGTTCTTTTAATT+GGG + chr3_1:87641496-87641515 Msa0384470:intron 25.0%
! TTCAAAAATGGAAATACCTA+TGG + chr3_1:87641613-87641632 Msa0384470:intron 25.0%
!!! TTTTTTTTTTGCTCCGATTA+TGG + chr3_1:87641650-87641669 Msa0384470:intron 25.0%
!! AAAAAGGATGTTGTTTGTTT+GGG - chr3_1:87642138-87642157 None:intergenic 25.0%
!! AAAAAAGGATGTTGTTTGTT+TGG - chr3_1:87642139-87642158 None:intergenic 25.0%
!!! CATAAAGATTTTAGAATCAC+TGG - chr3_1:87642193-87642212 None:intergenic 25.0%
! ATAAGGAAAAACTTACTTCT+GGG + chr3_1:87642285-87642304 Msa0384470:CDS 25.0%
!! TTCTTTTATGTTTTCATTGC+TGG + chr3_1:87642385-87642404 Msa0384470:intron 25.0%
!!! TGTTTTAGTTTGTCTCTTTT+TGG + chr3_1:87642412-87642431 Msa0384470:intron 25.0%
!!! GTTTTAGTTTGTCTCTTTTT+GGG + chr3_1:87642413-87642432 Msa0384470:intron 25.0%
!! ATAAAGGGAATACATCTTTT+CGG - chr3_1:87643244-87643263 None:intergenic 25.0%
! AAACAACATTGAAAACAACA+TGG + chr3_1:87643297-87643316 Msa0384470:intron 25.0%
! CATTTCAAGATACATTGAAT+AGG - chr3_1:87643551-87643570 None:intergenic 25.0%
! ACAACCTATATTAGAGAAAA+GGG - chr3_1:87643601-87643620 None:intergenic 25.0%
! AACAACCTATATTAGAGAAA+AGG - chr3_1:87643602-87643621 None:intergenic 25.0%
! TCCAATGTACTTATCAATTA+TGG - chr3_1:87643632-87643651 None:intergenic 25.0%
! ATCTTATAACAAATTCCTCA+TGG + chr3_1:87643998-87644017 Msa0384470:intron 25.0%
! TTACAAAGAAAAGTAGGTAT+TGG - chr3_1:87644166-87644185 None:intergenic 25.0%
! AACCATTTCTGACAATTTAT+GGG - chr3_1:87644201-87644220 None:intergenic 25.0%
! GATATGGAATTTAATTGTAG+AGG - chr3_1:87644238-87644257 None:intergenic 25.0%
! TTGAACTTCACAAAAAGAAA+AGG - chr3_1:87644388-87644407 None:intergenic 25.0%
!!! TATCATTGATGTAGTCTTAT+CGG + chr3_1:87644487-87644506 Msa0384470:intron 25.0%
! TCATAGACAAATCAATACAA+AGG - chr3_1:87645002-87645021 None:intergenic 25.0%
! AAAGTAAAAGAGATACAGTA+AGG - chr3_1:87645032-87645051 None:intergenic 25.0%
!! TTACTGTATCTCTTTTACTT+TGG + chr3_1:87645031-87645050 Msa0384470:intron 25.0%
!!! TCCAGATTCTAGTTTTAATA+TGG + chr3_1:87645267-87645286 Msa0384470:three_prime_UTR 25.0%
!!! CCAGATTCTAGTTTTAATAT+GGG + chr3_1:87645268-87645287 Msa0384470:three_prime_UTR 25.0%
!! AGTAATAATAGACTGGTTTG+TGG - chr3_1:87641042-87641061 None:intergenic 30.0%
CCCTATCAATTGCTTAAATT+AGG + chr3_1:87641359-87641378 Msa0384470:intron 30.0%
CAATTAAAAGAACCTCAATG+AGG - chr3_1:87641497-87641516 None:intergenic 30.0%
! CTCATTGAGGTTCTTTTAAT+TGG + chr3_1:87641495-87641514 Msa0384470:intron 30.0%
!! AGGTTCTTTTAATTGGGTAA+TGG + chr3_1:87641502-87641521 Msa0384470:intron 30.0%
AGTTGTGATATAGTAAAACC+TGG + chr3_1:87641982-87642001 Msa0384470:intron 30.0%
GATAAGGAAAAACTTACTTC+TGG + chr3_1:87642284-87642303 Msa0384470:CDS 30.0%
AGCAGAGTAACTAATATTAC+CGG - chr3_1:87642558-87642577 None:intergenic 30.0%
AATATTAGTTACTCTGCTGT+TGG + chr3_1:87642560-87642579 Msa0384470:CDS 30.0%
TAAAAGAGACATCAATTGTG+TGG + chr3_1:87642867-87642886 Msa0384470:intron 30.0%
!! TTTCTTAATTTGTGCCCTAA+GGG + chr3_1:87643121-87643140 Msa0384470:intron 30.0%
GTTTAGATGAAGGGTAAATT+TGG + chr3_1:87643204-87643223 Msa0384470:intron 30.0%
GAAGTTAGCATCTATATTAC+TGG - chr3_1:87643502-87643521 None:intergenic 30.0%
TATAGATGCTAACTTCCTAA+AGG + chr3_1:87643506-87643525 Msa0384470:CDS 30.0%
! CATTCCCTTTTCTCTAATAT+AGG + chr3_1:87643594-87643613 Msa0384470:intron 30.0%
GCCATAATTGATAAGTACAT+TGG + chr3_1:87643628-87643647 Msa0384470:CDS 30.0%
AAACATCTCTCTAATTAACC+TGG - chr3_1:87643662-87643681 None:intergenic 30.0%
AGGTTAATTAGAGAGATGTT+TGG + chr3_1:87643661-87643680 Msa0384470:CDS 30.0%
GGTTAATTAGAGAGATGTTT+GGG + chr3_1:87643662-87643681 Msa0384470:CDS 30.0%
CTAAACACAAAAATATCACC+TGG - chr3_1:87643702-87643721 None:intergenic 30.0%
!! TTAGCCATGCATCATTTTTA+TGG + chr3_1:87643782-87643801 Msa0384470:intron 30.0%
TCATCCATAAAAATGATGCA+TGG - chr3_1:87643789-87643808 None:intergenic 30.0%
TTTCCAAAATACAAACATGG+TGG - chr3_1:87643969-87643988 None:intergenic 30.0%
TTATAACAAATTCCTCATGG+TGG + chr3_1:87644001-87644020 Msa0384470:intron 30.0%
TCACAAAAGTTGTCACAAAA+TGG - chr3_1:87644081-87644100 None:intergenic 30.0%
CAACCATTTCTGACAATTTA+TGG - chr3_1:87644202-87644221 None:intergenic 30.0%
TCTTTGAACTTTCAAAGATG+CGG + chr3_1:87644308-87644327 Msa0384470:intron 30.0%
TTGAACAAAAACATCAATCG+CGG - chr3_1:87644515-87644534 None:intergenic 30.0%
AAGTCATAATCAATCAACCA+TGG - chr3_1:87644559-87644578 None:intergenic 30.0%
GTTGTAGGTTAAAATGATCA+TGG + chr3_1:87644595-87644614 Msa0384470:intron 30.0%
! ATTTTTCTATCCAATCTTCC+AGG - chr3_1:87644662-87644681 None:intergenic 30.0%
TTATCTGTTGCAAAATTGTC+AGG + chr3_1:87644849-87644868 Msa0384470:intron 30.0%
TATCTGTTGCAAAATTGTCA+GGG + chr3_1:87644850-87644869 Msa0384470:intron 30.0%
ATACCTTCATAAAATCTTCG+TGG - chr3_1:87644954-87644973 None:intergenic 30.0%
AATCATCGAGTTAAGCATTA+TGG + chr3_1:87645217-87645236 Msa0384470:three_prime_UTR 30.0%
CCCATATTAAAACTAGAATC+TGG - chr3_1:87645271-87645290 None:intergenic 30.0%
!!! CTAGTTTTAATATGGGAACT+TGG + chr3_1:87645275-87645294 Msa0384470:three_prime_UTR 30.0%
TCATATCTATACTAGAGTCA+TGG + chr3_1:87645386-87645405 Msa0384470:three_prime_UTR 30.0%
TTAGGTCTCACAAATTGGAA+CGG - chr3_1:87641077-87641096 None:intergenic 35.0%
TGAAGTTAGGTCTCACAAAT+TGG - chr3_1:87641082-87641101 None:intergenic 35.0%
CAAAATCGGAAAGTTGAGAA+GGG - chr3_1:87641107-87641126 None:intergenic 35.0%
TTTCGTTGAGAATTTGACCT+AGG + chr3_1:87641383-87641402 Msa0384470:intron 35.0%
! ATGAAAAGCACAATCTTCCT+AGG - chr3_1:87641403-87641422 None:intergenic 35.0%
! ATTAGGGCAATTTTATCAGC+TGG + chr3_1:87641445-87641464 Msa0384470:intron 35.0%
! ATTAGTTTGAAGCCTCATTG+AGG + chr3_1:87641482-87641501 Msa0384470:intron 35.0%
ATGGATGAGACTTGTGAATT+TGG + chr3_1:87641685-87641704 Msa0384470:intron 35.0%
TCAAATCTCAAATTGCAGTG+AGG + chr3_1:87641710-87641729 Msa0384470:intron 35.0%
CAAATCTCAAATTGCAGTGA+GGG + chr3_1:87641711-87641730 Msa0384470:intron 35.0%
TTGAAGTCTCTTCAAAGTGT+CGG + chr3_1:87641781-87641800 Msa0384470:CDS 35.0%
AGAGATGATCATGAATTAGC+AGG - chr3_1:87641916-87641935 None:intergenic 35.0%
TCATCTCTACAGCTACATTT+AGG + chr3_1:87641928-87641947 Msa0384470:intron 35.0%
! AACCTGGATTGTTTTCATGA+AGG + chr3_1:87641998-87642017 Msa0384470:intron 35.0%
TTTCCTTATCCACTTTACTC+CGG - chr3_1:87642274-87642293 None:intergenic 35.0%
! TTTCTATCGATTGTGTTGCT+AGG + chr3_1:87642496-87642515 Msa0384470:intron 35.0%
TGCAACATATTGTACACAAC+TGG - chr3_1:87642527-87642546 None:intergenic 35.0%
AATATGTTGCATGAAGATCC+CGG + chr3_1:87642536-87642555 Msa0384470:CDS 35.0%
GCAGAGTAACTAATATTACC+GGG - chr3_1:87642557-87642576 None:intergenic 35.0%
TGGTTTATCTGATCAGATCA+GGG + chr3_1:87642583-87642602 Msa0384470:CDS 35.0%
! GGTGAAAAGTTGATTACCTT+GGG - chr3_1:87642677-87642696 None:intergenic 35.0%
! TGGTGAAAAGTTGATTACCT+TGG - chr3_1:87642678-87642697 None:intergenic 35.0%
AAGTATGAAAGGACAGATAC+TGG - chr3_1:87642707-87642726 None:intergenic 35.0%
CAATTAGTGCAGTAGAAAAG+CGG - chr3_1:87642837-87642856 None:intergenic 35.0%
CACTACAATAGAAACACTAG+TGG - chr3_1:87642918-87642937 None:intergenic 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG + chr3_1:87642981-87643000 Msa0384470:intron 35.0%
!! GTTTCTTAATTTGTGCCCTA+AGG + chr3_1:87643120-87643139 Msa0384470:intron 35.0%
TCTTCTATTCCTCATCTTTC+AGG + chr3_1:87643419-87643438 Msa0384470:intron 35.0%
CTTCTATTCCTCATCTTTCA+GGG + chr3_1:87643420-87643439 Msa0384470:intron 35.0%
GTGTTTAGTTGTCTTCCTAT+AGG + chr3_1:87643714-87643733 Msa0384470:intron 35.0%
TGAGATTCAGAGAACGTTAA+TGG + chr3_1:87643860-87643879 Msa0384470:CDS 35.0%
! TAGCCACCATGTTTGTATTT+TGG + chr3_1:87643963-87643982 Msa0384470:intron 35.0%
!! ACTTTTTCTCTCTGTTGCTT+TGG + chr3_1:87644132-87644151 Msa0384470:intron 35.0%
GTCCCATAAATTGTCAGAAA+TGG + chr3_1:87644196-87644215 Msa0384470:intron 35.0%
TGGTGAAATAGACTATGAAG+CGG + chr3_1:87644754-87644773 Msa0384470:CDS 35.0%
ATCTGTTGCAAAATTGTCAG+GGG + chr3_1:87644851-87644870 Msa0384470:intron 35.0%
CAAAATTGTCAGGGGTTTAA+TGG + chr3_1:87644859-87644878 Msa0384470:intron 35.0%
! GATCCACGAAGATTTTATGA+AGG + chr3_1:87644948-87644967 Msa0384470:CDS 35.0%
! TGAAGGTATGCTCTTTGTTT+AGG + chr3_1:87644965-87644984 Msa0384470:intron 35.0%
! ATCTCTTTTACTTTGGTACC+AGG + chr3_1:87645038-87645057 Msa0384470:intron 35.0%
ACTCGATGATTTGACAAACT+TGG - chr3_1:87645208-87645227 None:intergenic 35.0%
CTGTCTCTATTGTAGAAGTT+CGG + chr3_1:87645362-87645381 Msa0384470:three_prime_UTR 35.0%
GCAAAATCGGAAAGTTGAGA+AGG - chr3_1:87641108-87641127 None:intergenic 40.0%
AAGAAGCTTCTTCCGATACT+CGG - chr3_1:87641189-87641208 None:intergenic 40.0%
! AAAAGGAATTCTAGCTGCGA+GGG - chr3_1:87641262-87641281 None:intergenic 40.0%
!! ACCTTTGATTTGCTTGCCAT+CGG + chr3_1:87641332-87641351 Msa0384470:intron 40.0%
! CAATTGATAGGGTTTTCCGA+TGG - chr3_1:87641351-87641370 None:intergenic 40.0%
! TGAAGTCTCTTCAAAGTGTC+GGG + chr3_1:87641782-87641801 Msa0384470:CDS 40.0%
TTACAGCGTTCATTGTCAAG+AGG - chr3_1:87641832-87641851 None:intergenic 40.0%
GACCTTCATGAAAACAATCC+AGG - chr3_1:87642003-87642022 None:intergenic 40.0%
! ATGTTGTTTGTTTGGGTAGG+TGG - chr3_1:87642131-87642150 None:intergenic 40.0%
! AGGATGTTGTTTGTTTGGGT+AGG - chr3_1:87642134-87642153 None:intergenic 40.0%
GTGATTGTTAAAGCAAGCAG+TGG + chr3_1:87642227-87642246 Msa0384470:intron 40.0%
TGACAACACTCACCATAATG+CGG + chr3_1:87642327-87642346 Msa0384470:CDS 40.0%
CTCTGATAACTTACTTCACG+AGG - chr3_1:87642359-87642378 None:intergenic 40.0%
ATTAGTTACTCTGCTGTTGG+TGG + chr3_1:87642563-87642582 Msa0384470:CDS 40.0%
GTGGTTTATCTGATCAGATC+AGG + chr3_1:87642582-87642601 Msa0384470:CDS 40.0%
TGATCAGATCAGGGAATTGA+GGG + chr3_1:87642592-87642611 Msa0384470:CDS 40.0%
AAGAGCTCAGGATTCATTAG+AGG - chr3_1:87642632-87642651 None:intergenic 40.0%
AGTTGGAATTAAACCTCCCA+AGG + chr3_1:87642658-87642677 Msa0384470:CDS 40.0%
! GAAAAGTTGATTACCTTGGG+AGG - chr3_1:87642674-87642693 None:intergenic 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG + chr3_1:87642980-87642999 Msa0384470:intron 40.0%
!! AATGTTAACTTGTGCCCTTG+GGG + chr3_1:87642982-87643001 Msa0384470:intron 40.0%
! TTTTTAAACCTGTGCCCCAA+GGG - chr3_1:87642999-87643018 None:intergenic 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - chr3_1:87643138-87643157 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - chr3_1:87643139-87643158 None:intergenic 40.0%
! TTTCAGGGTGTTCTCCTTTA+TGG + chr3_1:87643435-87643454 Msa0384470:intron 40.0%
! TTCAGGGTGTTCTCCTTTAT+GGG + chr3_1:87643436-87643455 Msa0384470:intron 40.0%
! AACAATGTTTTACCCGTACC+AGG - chr3_1:87643465-87643484 None:intergenic 40.0%
TGGTACGGGTAAAACATTGT+TGG + chr3_1:87643464-87643483 Msa0384470:CDS 40.0%
! GGGTAAAACATTGTTGGCTA+GGG + chr3_1:87643470-87643489 Msa0384470:CDS 40.0%
AGATGCATAAGCTGACCTTT+AGG - chr3_1:87643524-87643543 None:intergenic 40.0%
ATGCATGGCTAAGAAAACAG+AGG - chr3_1:87643774-87643793 None:intergenic 40.0%
GAGCTGCTTAATCAACTTGA+TGG + chr3_1:87643882-87643901 Msa0384470:CDS 40.0%
!! CTTGATGGCTTTGATCAACT+TGG + chr3_1:87643897-87643916 Msa0384470:CDS 40.0%
!! TGGCTTTGATCAACTTGGAA+AGG + chr3_1:87643902-87643921 Msa0384470:CDS 40.0%
AACAAATTCCTCATGGTGGT+AGG + chr3_1:87644005-87644024 Msa0384470:intron 40.0%
CCATCTGAGCGTATAAGATA+TGG - chr3_1:87644254-87644273 None:intergenic 40.0%
CCATATCTTATACGCTCAGA+TGG + chr3_1:87644251-87644270 Msa0384470:intron 40.0%
TCAATCAACCATGGAGAGTT+TGG - chr3_1:87644550-87644569 None:intergenic 40.0%
CTCGATTGTTCATTTGGCAA+TGG - chr3_1:87644692-87644711 None:intergenic 40.0%
CATTGCCAAATGAACAATCG+AGG + chr3_1:87644690-87644709 Msa0384470:CDS 40.0%
TCCATCCTCGATTGTTCATT+TGG - chr3_1:87644698-87644717 None:intergenic 40.0%
ATTCTTAAGATCCATGCTGC+TGG + chr3_1:87644719-87644738 Msa0384470:CDS 40.0%
CATTCAATTTCCTTACAGCC+TGG - chr3_1:87645059-87645078 None:intergenic 40.0%
GGCTGTAAGGAAATTGAATG+AGG + chr3_1:87645059-87645078 Msa0384470:intron 40.0%
!!! GCACACTACAATGCTGATTT+TGG + chr3_1:87645102-87645121 Msa0384470:CDS 40.0%
TTGTGAAATTCTCAGAGCCA+TGG + chr3_1:87645141-87645160 Msa0384470:three_prime_UTR 40.0%
! AAACTTGGCTGAGGTATTTC+TGG - chr3_1:87645193-87645212 None:intergenic 40.0%
TGATTTGACAAACTTGGCTG+AGG - chr3_1:87645202-87645221 None:intergenic 40.0%
TAATATGGGAACTTGGCGAA+CGG + chr3_1:87645282-87645301 Msa0384470:three_prime_UTR 40.0%
! GTTGAGAAGGGTGTGAAGTT+AGG - chr3_1:87641095-87641114 None:intergenic 45.0%
TGGTTGTGGCGATGCAAAAT+CGG - chr3_1:87641121-87641140 None:intergenic 45.0%
! ATCTTCTGTGGTGTCAGACA+TGG - chr3_1:87641141-87641160 None:intergenic 45.0%
GAAGAAGCTTCTTCAGCACA+AGG + chr3_1:87641196-87641215 Msa0384470:CDS 45.0%
GCTTCTTCAGCACAAGGAAT+TGG + chr3_1:87641202-87641221 Msa0384470:CDS 45.0%
TTGGAATCCAGAGTTCGATC+TGG + chr3_1:87641221-87641240 Msa0384470:CDS 45.0%
AGACAAACCAGATCGAACTC+TGG - chr3_1:87641231-87641250 None:intergenic 45.0%
! GAAAAGGAATTCTAGCTGCG+AGG - chr3_1:87641263-87641282 None:intergenic 45.0%
TCCGATGGCAAGCAAATCAA+AGG - chr3_1:87641336-87641355 None:intergenic 45.0%
AAGCAGTGGTCCTAGATATG+TGG + chr3_1:87642241-87642260 Msa0384470:CDS 45.0%
AGTGGTCCTAGATATGTGGT+TGG + chr3_1:87642245-87642264 Msa0384470:CDS 45.0%
!! ACTTACTTCTGGGACTAGAG+TGG + chr3_1:87642295-87642314 Msa0384470:CDS 45.0%
GACAACACTCACCATAATGC+GGG + chr3_1:87642328-87642347 Msa0384470:CDS 45.0%
CTGATCAGATCAGGGAATTG+AGG + chr3_1:87642591-87642610 Msa0384470:CDS 45.0%
! CCAACTCTAAGAAAGAGCTC+AGG - chr3_1:87642644-87642663 None:intergenic 45.0%
CCTGAGCTCTTTCTTAGAGT+TGG + chr3_1:87642641-87642660 Msa0384470:CDS 45.0%
AGGACAGATACTGGAAAGTG+TGG - chr3_1:87642698-87642717 None:intergenic 45.0%
! GTTTTTAAACCTGTGCCCCA+AGG - chr3_1:87643000-87643019 None:intergenic 45.0%
! AGGGAATACATCTTTTCGGC+TGG - chr3_1:87643240-87643259 None:intergenic 45.0%
! AATGTTTTACCCGTACCAGG+AGG - chr3_1:87643462-87643481 None:intergenic 45.0%
! CGGGTAAAACATTGTTGGCT+AGG + chr3_1:87643469-87643488 Msa0384470:CDS 45.0%
!! AGTACATTGGAGAAAGTGCC+AGG + chr3_1:87643641-87643660 Msa0384470:CDS 45.0%
ATGGATGAGATCGATGCCAT+TGG + chr3_1:87643801-87643820 Msa0384470:CDS 45.0%
CACTTGTTCCCTCACTGAAA+CGG - chr3_1:87643833-87643852 None:intergenic 45.0%
CATATACACCTACCACCATG+AGG - chr3_1:87644016-87644035 None:intergenic 45.0%
GATGCGGTTGCTAAGTGTAA+TGG + chr3_1:87644324-87644343 Msa0384470:intron 45.0%
! GCGCTCTGAATATCTGTTGT+AGG + chr3_1:87644580-87644599 Msa0384470:intron 45.0%
TATCCAATCTTCCAGGACGT+AGG - chr3_1:87644655-87644674 None:intergenic 45.0%
GCCAAATGAACAATCGAGGA+TGG + chr3_1:87644694-87644713 Msa0384470:CDS 45.0%
CAGCTTCAGTGCACACATTT+CGG - chr3_1:87644894-87644913 None:intergenic 45.0%
TACTTTGGTACCAGGCTGTA+AGG + chr3_1:87645046-87645065 Msa0384470:intron 45.0%
CTCAGAGCCATGGATGTTTA+TGG + chr3_1:87645151-87645170 Msa0384470:three_prime_UTR 45.0%
TGCACTGCCATAAACATCCA+TGG - chr3_1:87645161-87645180 None:intergenic 45.0%
!!! CTTTTTAATTATTAATTAAA+AGG - chr3_1:87643163-87643182 None:intergenic 5.0%
!!! CTTTTAATTAATAATTAAAA+AGG + chr3_1:87643161-87643180 Msa0384470:intron 5.0%
GGTCTCACAAATTGGAACGG+TGG - chr3_1:87641074-87641093 None:intergenic 50.0%
! TGTGGTGTCAGACATGGTTG+TGG - chr3_1:87641135-87641154 None:intergenic 50.0%
!! CAAAGTGTCGGGCAGATCAT+CGG + chr3_1:87641793-87641812 Msa0384470:CDS 50.0%
AGATCATCGGCGAAGTTCTC+AGG + chr3_1:87641806-87641825 Msa0384470:CDS 50.0%
! CTAGATATGTGGTTGGCTGC+CGG + chr3_1:87642252-87642271 Msa0384470:CDS 50.0%
CTGCCGGAGTAAAGTGGATA+AGG + chr3_1:87642268-87642287 Msa0384470:CDS 50.0%
GGAGAACACCCTGAAAGATG+AGG - chr3_1:87643431-87643450 None:intergenic 50.0%
GATGAGATCGATGCCATTGG+TGG + chr3_1:87643804-87643823 Msa0384470:CDS 50.0%
CAGTTCTGCCAAACTCTCCA+TGG + chr3_1:87644539-87644558 Msa0384470:intron 50.0%
GATCATGGCAACAAACCGAC+CGG + chr3_1:87644610-87644629 Msa0384470:CDS 50.0%
AGAGCAGGGTCAAGTACATC+CGG - chr3_1:87644632-87644651 None:intergenic 50.0%
TCTCCTACGTCCTGGAAGAT+TGG + chr3_1:87644649-87644668 Msa0384470:CDS 50.0%
GCTTAGCAATTCCAGCAGCA+TGG - chr3_1:87644733-87644752 None:intergenic 50.0%
GCTGCTGGAATTGCTAAGCA+TGG + chr3_1:87644734-87644753 Msa0384470:CDS 50.0%
TGAAGCGGTTGTGAAGCTTG+CGG + chr3_1:87644769-87644788 Msa0384470:CDS 50.0%
AAGCTTGCGGAGGTAAGTCT+TGG + chr3_1:87644782-87644801 Msa0384470:intron 50.0%
CGAAATGTGTGCACTGAAGC+TGG + chr3_1:87644892-87644911 Msa0384470:CDS 50.0%
TAAGCATTATGGCAGCCGTC+CGG + chr3_1:87645228-87645247 Msa0384470:three_prime_UTR 50.0%
GGATAGTACATGCCATTGCC+CGG - chr3_1:87645250-87645269 None:intergenic 50.0%
GAACTTGGCGAACGGTAAAG+AGG + chr3_1:87645290-87645309 Msa0384470:three_prime_UTR 50.0%
GATACTCGGCGACTGCGTTA+CGG - chr3_1:87641175-87641194 None:intergenic 55.0%
GTAACGCAGTCGCCGAGTAT+CGG + chr3_1:87641174-87641193 Msa0384470:CDS 55.0%
CGGCAGCCAACCACATATCT+AGG - chr3_1:87642254-87642273 None:intergenic 55.0%
ACGAGGAAGAGCCCGCATTA+TGG - chr3_1:87642342-87642361 None:intergenic 55.0%
GTTCTCCTTTATGGGCCTCC+TGG + chr3_1:87643444-87643463 Msa0384470:CDS 55.0%
CCTTTATGGGCCTCCTGGTA+CGG + chr3_1:87643449-87643468 Msa0384470:CDS 55.0%
CTTTATGGGCCTCCTGGTAC+GGG + chr3_1:87643450-87643469 Msa0384470:CDS 55.0%
TGGGTATGCACGTGATCACC+AGG + chr3_1:87643681-87643700 Msa0384470:CDS 55.0%
ACTGAAACGGCGACCACCAA+TGG - chr3_1:87643820-87643839 None:intergenic 55.0%
CAGGGTCAAGTACATCCGGT+CGG - chr3_1:87644628-87644647 None:intergenic 55.0%
TTCCAGGACGTAGGAGAGCA+GGG - chr3_1:87644646-87644665 None:intergenic 55.0%
CTTGCGGAGGTAAGTCTTGG+TGG + chr3_1:87644785-87644804 Msa0384470:intron 55.0%
! GGAGGTAAGTCTTGGTGGCT+TGG + chr3_1:87644790-87644809 Msa0384470:intron 55.0%
AAGCATTATGGCAGCCGTCC+GGG + chr3_1:87645229-87645248 Msa0384470:three_prime_UTR 55.0%
AGTACATGCCATTGCCCGGA+CGG - chr3_1:87645246-87645265 None:intergenic 55.0%
GCGTCGAACGGCATCTTCTG+TGG - chr3_1:87641153-87641172 None:intergenic 60.0%
! GACTGCGTTACGGCGTCGAA+CGG - chr3_1:87641165-87641184 None:intergenic 60.0%
! GGTTGGCTGCCGGAGTAAAG+TGG + chr3_1:87642262-87642281 Msa0384470:CDS 60.0%
AACTTGTGCCCTTGGGGCAC+AGG + chr3_1:87642988-87643007 Msa0384470:intron 60.0%
CCGTACCAGGAGGCCCATAA+AGG - chr3_1:87643452-87643471 None:intergenic 60.0%
TGGTGGTCGCCGTTTCAGTG+AGG + chr3_1:87643821-87643840 Msa0384470:CDS 60.0%
GGTGGTCGCCGTTTCAGTGA+GGG + chr3_1:87643822-87643841 Msa0384470:CDS 60.0%
CTTCCAGGACGTAGGAGAGC+AGG - chr3_1:87644647-87644666 None:intergenic 60.0%
AGCGGTTGTGAAGCTTGCGG+AGG + chr3_1:87644772-87644791 Msa0384470:CDS 60.0%
GACCCTGCTCTCCTACGTCC+TGG + chr3_1:87644641-87644660 Msa0384470:CDS 65.0%
TATGGCAGCCGTCCGGGCAA+TGG + chr3_1:87645235-87645254 Msa0384470:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 87641025 87645512 87641025 ID=Msa0384470;Name=Msa0384470
chr3_1 mRNA 87641025 87645512 87641025 ID=Msa0384470-mRNA-1;Parent=Msa0384470;Name=Msa0384470-mRNA-1;_AED=0.10;_eAED=0.10;_QI=115|1|1|1|1|1|10|378|399
chr3_1 exon 87641025 87641242 87641025 ID=Msa0384470-mRNA-1:exon:23458;Parent=Msa0384470-mRNA-1
chr3_1 exon 87641728 87641847 87641728 ID=Msa0384470-mRNA-1:exon:23459;Parent=Msa0384470-mRNA-1
chr3_1 exon 87642228 87642364 87642228 ID=Msa0384470-mRNA-1:exon:23460;Parent=Msa0384470-mRNA-1
chr3_1 exon 87642518 87642679 87642518 ID=Msa0384470-mRNA-1:exon:23461;Parent=Msa0384470-mRNA-1
chr3_1 exon 87643441 87643527 87643441 ID=Msa0384470-mRNA-1:exon:23462;Parent=Msa0384470-mRNA-1
chr3_1 exon 87643616 87643702 87643616 ID=Msa0384470-mRNA-1:exon:23463;Parent=Msa0384470-mRNA-1
chr3_1 exon 87643786 87643923 87643786 ID=Msa0384470-mRNA-1:exon:23464;Parent=Msa0384470-mRNA-1
chr3_1 exon 87644602 87644793 87644602 ID=Msa0384470-mRNA-1:exon:23465;Parent=Msa0384470-mRNA-1
chr3_1 exon 87644871 87644969 87644871 ID=Msa0384470-mRNA-1:exon:23466;Parent=Msa0384470-mRNA-1
chr3_1 exon 87645060 87645512 87645060 ID=Msa0384470-mRNA-1:exon:23467;Parent=Msa0384470-mRNA-1
chr3_1 five_prime_UTR 87641025 87641139 87641025 ID=Msa0384470-mRNA-1:five_prime_utr;Parent=Msa0384470-mRNA-1
chr3_1 CDS 87641140 87641242 87641140 ID=Msa0384470-mRNA-1:cds;Parent=Msa0384470-mRNA-1
chr3_1 CDS 87641728 87641847 87641728 ID=Msa0384470-mRNA-1:cds;Parent=Msa0384470-mRNA-1
chr3_1 CDS 87642228 87642364 87642228 ID=Msa0384470-mRNA-1:cds;Parent=Msa0384470-mRNA-1
chr3_1 CDS 87642518 87642679 87642518 ID=Msa0384470-mRNA-1:cds;Parent=Msa0384470-mRNA-1
chr3_1 CDS 87643441 87643527 87643441 ID=Msa0384470-mRNA-1:cds;Parent=Msa0384470-mRNA-1
chr3_1 CDS 87643616 87643702 87643616 ID=Msa0384470-mRNA-1:cds;Parent=Msa0384470-mRNA-1
chr3_1 CDS 87643786 87643923 87643786 ID=Msa0384470-mRNA-1:cds;Parent=Msa0384470-mRNA-1
chr3_1 CDS 87644602 87644793 87644602 ID=Msa0384470-mRNA-1:cds;Parent=Msa0384470-mRNA-1
chr3_1 CDS 87644871 87644969 87644871 ID=Msa0384470-mRNA-1:cds;Parent=Msa0384470-mRNA-1
chr3_1 CDS 87645060 87645134 87645060 ID=Msa0384470-mRNA-1:cds;Parent=Msa0384470-mRNA-1
chr3_1 three_prime_UTR 87645135 87645512 87645135 ID=Msa0384470-mRNA-1:three_prime_utr;Parent=Msa0384470-mRNA-1
Gene Sequence

>Msa0384470

ATGTCTGACACCACAGAAGATGCCGTTCGACGCCGTAACGCAGTCGCCGAGTATCGGAAGAAGCTTCTTCAGCACAAGGAATTGGAATCCAGAGTTCGATCTGTGAGGGAGAATTTGCGATCTTCAAAGAAAGAGTTTAACAAAACAGAAGATGATTTGAAGTCTCTTCAAAGTGTCGGGCAGATCATCGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCTTGATTGTTAAAGCAAGCAGTGGTCCTAGATATGTGGTTGGCTGCCGGAGTAAAGTGGATAAGGAAAAACTTACTTCTGGGACTAGAGTGGTACTTGATATGACAACACTCACCATAATGCGGGCTCTTCCTCGTGAAGTTGATCCAGTTGTGTACAATATGTTGCATGAAGATCCCGGTAATATTAGTTACTCTGCTGTTGGTGGTTTATCTGATCAGATCAGGGAATTGAGGGAATCAATTGAATTACCTCTAATGAATCCTGAGCTCTTTCTTAGAGTTGGAATTAAACCTCCCAAGGGTGTTCTCCTTTATGGGCCTCCTGGTACGGGTAAAACATTGTTGGCTAGGGCTATTGCCAGTAATATAGATGCTAACTTCCTAAAGGTTGTTTCAAGTGCCATAATTGATAAGTACATTGGAGAAAGTGCCAGGTTAATTAGAGAGATGTTTGGGTATGCACGTGATCACCAGCCATGCATCATTTTTATGGATGAGATCGATGCCATTGGTGGTCGCCGTTTCAGTGAGGGAACAAGTGCAGATCGTGAGATTCAGAGAACGTTAATGGAGCTGCTTAATCAACTTGATGGCTTTGATCAACTTGGAAAGGTTAAAATGATCATGGCAACAAACCGACCGGATGTACTTGACCCTGCTCTCCTACGTCCTGGAAGATTGGATAGAAAAATTGAAATTCCATTGCCAAATGAACAATCGAGGATGGAAATTCTTAAGATCCATGCTGCTGGAATTGCTAAGCATGGTGAAATAGACTATGAAGCGGTTGTGAAGCTTGCGGAGGGGTTTAATGGAGCTGATCTCCGAAATGTGTGCACTGAAGCTGGAATGTCAGCAATTCGAGCAGAGCGTGACTATGTGATCCACGAAGATTTTATGAAGGCTGTAAGGAAATTGAATGAGGCAAAGAAACTTGAATCTAGTGCACACTACAATGCTGATTTTGGAAAAGAATAA
Protein sequence

>Msa0384470

MSDTTEDAVRRRNAVAEYRKKLLQHKELESRVRSVRENLRSSKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKE*