Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387430 | XP_024632360.1 | 75.601 | 291 | 21 | 6 | 25 | 283 | 6 | 278 | 1.80e-140 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387430 | A0A072VBD4 | 75.601 | 291 | 21 | 6 | 25 | 283 | 6 | 278 | 8.58e-141 | 407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0218240 | Msa0387430 | 0.815607 | 8.478054e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387430 | MtrunA17_Chr2g0320431 | 75.601 | 291 | 21 | 6 | 25 | 283 | 6 | 278 | 1.65e-144 | 407 |
| Msa0387430 | MtrunA17_Chr2g0320451 | 89.375 | 160 | 10 | 1 | 36 | 195 | 220 | 372 | 5.65e-92 | 293 |
| Msa0387430 | MtrunA17_Chr2g0314231 | 73.759 | 141 | 32 | 1 | 36 | 171 | 4 | 144 | 5.42e-68 | 208 |
| Msa0387430 | MtrunA17_Chr2g0314241 | 63.504 | 137 | 14 | 1 | 36 | 172 | 54 | 154 | 1.03e-52 | 169 |
| Msa0387430 | MtrunA17_Chr2g0320401 | 78.704 | 108 | 9 | 1 | 4 | 97 | 1 | 108 | 4.47e-51 | 163 |
| Msa0387430 | MtrunA17_Chr7g0265211 | 36.232 | 138 | 77 | 2 | 40 | 177 | 246 | 372 | 5.31e-20 | 90.1 |
| Msa0387430 | MtrunA17_Chr7g0222931 | 34.932 | 146 | 83 | 2 | 12 | 157 | 374 | 507 | 8.91e-19 | 85.9 |
| Msa0387430 | MtrunA17_Chr1g0179841 | 32.192 | 146 | 90 | 2 | 46 | 191 | 99 | 235 | 3.71e-17 | 81.6 |
| Msa0387430 | MtrunA17_Chr3g0079841 | 73.077 | 52 | 14 | 0 | 225 | 276 | 156 | 207 | 1.05e-16 | 78.2 |
| Msa0387430 | MtrunA17_Chr1g0182221 | 34.146 | 123 | 69 | 2 | 35 | 157 | 394 | 504 | 8.63e-16 | 77.0 |
| Msa0387430 | MtrunA17_Chr4g0030901 | 32.773 | 119 | 61 | 3 | 42 | 157 | 318 | 420 | 2.01e-13 | 70.1 |
| Msa0387430 | MtrunA17_Chr1g0182481 | 31.884 | 138 | 80 | 3 | 42 | 179 | 254 | 377 | 3.02e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387430 | AT2G27980.1 | 48.171 | 164 | 77 | 2 | 40 | 203 | 375 | 530 | 1.81e-41 | 152 |
| Msa0387430 | AT2G36720.1 | 31.677 | 161 | 100 | 3 | 43 | 203 | 261 | 411 | 3.31e-19 | 88.2 |
| Msa0387430 | AT2G36720.2 | 31.677 | 161 | 100 | 3 | 43 | 203 | 261 | 411 | 3.31e-19 | 88.2 |
| Msa0387430 | AT5G13660.2 | 36.296 | 135 | 74 | 3 | 32 | 165 | 388 | 511 | 2.04e-18 | 85.5 |
| Msa0387430 | AT5G13660.1 | 36.296 | 135 | 73 | 3 | 32 | 165 | 388 | 510 | 4.52e-18 | 84.3 |
| Msa0387430 | AT5G59830.3 | 33.621 | 116 | 64 | 2 | 42 | 157 | 290 | 392 | 9.07e-15 | 74.3 |
| Msa0387430 | AT5G59830.1 | 33.621 | 116 | 64 | 2 | 42 | 157 | 290 | 392 | 9.07e-15 | 74.3 |
| Msa0387430 | AT5G59830.2 | 33.621 | 116 | 64 | 2 | 42 | 157 | 290 | 392 | 9.07e-15 | 74.3 |
| Msa0387430 | AT3G53680.1 | 35.345 | 116 | 63 | 2 | 42 | 157 | 182 | 285 | 4.74e-14 | 72.8 |
| Msa0387430 | AT3G53680.2 | 35.345 | 116 | 63 | 2 | 42 | 157 | 182 | 285 | 4.88e-14 | 72.8 |
| Msa0387430 | AT2G37520.1 | 31.034 | 116 | 68 | 2 | 42 | 157 | 172 | 275 | 2.25e-12 | 67.8 |
Find 70 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTGCAACTGGGATTC+TGG | 0.215141 | 3_1:-91379263 | Msa0387430:CDS |
| TAATCCGGAGGACGTTTATT+AGG | 0.284155 | 3_1:+91378848 | None:intergenic |
| CAAGGTGTGATCAAAGATTC+AGG | 0.313892 | 3_1:-91379054 | Msa0387430:CDS |
| AGTGTCTGTGTTGGACTAAT+TGG | 0.330741 | 3_1:+91377563 | None:intergenic |
| CAGAACCTCCCTTCATTGTT+TGG | 0.331569 | 3_1:+91379314 | None:intergenic |
| CTGAAGGATCTTCTTGCAAC+TGG | 0.333826 | 3_1:-91379271 | Msa0387430:CDS |
| AGAGGATGCGCTCTTGGTTT+CGG | 0.354013 | 3_1:-91378491 | Msa0387430:CDS |
| TGGGAGTTGTAAGGGGAATC+AGG | 0.356202 | 3_1:-91379016 | Msa0387430:CDS |
| CAAACAATGAAGGGAGGTTC+TGG | 0.363982 | 3_1:-91379313 | Msa0387430:CDS |
| AGGGGAATCAGGCAAGTAAA+TGG | 0.390137 | 3_1:-91379005 | Msa0387430:CDS |
| TGAAATCACCCAGGACCATT+TGG | 0.397269 | 3_1:+91378741 | None:intergenic |
| TGAGAATGGAAAACTCCTTC+GGG | 0.415866 | 3_1:-91378816 | Msa0387430:CDS |
| GGCAAGTAAATGGAGGGATA+TGG | 0.416540 | 3_1:-91378995 | Msa0387430:intron |
| TGCAGGTTTATCAGAAGAAA+AGG | 0.421495 | 3_1:-91375652 | Msa0387430:intron |
| GATTATACTTACCTTGAGAA+TGG | 0.429569 | 3_1:-91378830 | Msa0387430:CDS |
| TGAAGGGAGGTTCTGGTAAG+AGG | 0.433057 | 3_1:-91379306 | Msa0387430:CDS |
| GGCGCGTAAACCGGAAGAAA+AGG | 0.434518 | 3_1:-91379082 | Msa0387430:CDS |
| AGAAGATCCTTCAGCTTGAC+AGG | 0.436708 | 3_1:+91379280 | None:intergenic |
| AAAAGAAGAGGATGCGCTCT+TGG | 0.439362 | 3_1:-91378497 | Msa0387430:CDS |
| ACTTCTTCCAAGAAAATAAG+AGG | 0.454192 | 3_1:-91378416 | Msa0387430:intron |
| TTGAGAATGGAAAACTCCTT+CGG | 0.454228 | 3_1:-91378817 | Msa0387430:CDS |
| ATCCAACGGAAGACTTGAAC+AGG | 0.468127 | 3_1:+91378781 | None:intergenic |
| GTCTCTTTCAACTCCATGCA+TGG | 0.468548 | 3_1:+91378542 | None:intergenic |
| TGATGTGTAGGCGCGTAAAC+CGG | 0.469006 | 3_1:-91379091 | Msa0387430:intron |
| ATATATAGTCACGGTGGACC+TGG | 0.469482 | 3_1:-91377495 | Msa0387430:CDS |
| TAAAGAGGTCCAAATGGTCC+TGG | 0.476200 | 3_1:-91378750 | Msa0387430:CDS |
| CTTGCAACTGGGATTCTGGA+GGG | 0.487680 | 3_1:-91379259 | Msa0387430:CDS |
| TTCTTGTGACCAAACAATGA+AGG | 0.488888 | 3_1:-91379323 | Msa0387430:CDS |
| TCAGTGCATGGAACAATTGA+CGG | 0.496206 | 3_1:-91377533 | Msa0387430:CDS |
| GTTGGATACATTGGATAAAG+AGG | 0.497086 | 3_1:-91378765 | Msa0387430:CDS |
| AAGTCTTCCGTTGGATACAT+TGG | 0.504489 | 3_1:-91378774 | Msa0387430:CDS |
| GGTAACAGTTATTAATGAGT+TGG | 0.505142 | 3_1:-91379411 | Msa0387430:intron |
| TTCTCAAGGTAAGTATAATC+CGG | 0.505601 | 3_1:+91378833 | None:intergenic |
| CACAAGAAGAGAGAGAAAGA+TGG | 0.516793 | 3_1:+91379338 | None:intergenic |
| ATTGGATAAAGAGGTCCAAA+TGG | 0.516952 | 3_1:-91378756 | Msa0387430:CDS |
| TAGTCCTAATAAACGTCCTC+CGG | 0.530968 | 3_1:-91378852 | Msa0387430:CDS |
| TGCCTGTTCAAGTCTTCCGT+TGG | 0.532331 | 3_1:-91378783 | Msa0387430:CDS |
| TGAAGGATCTTCTTGCAACT+GGG | 0.557026 | 3_1:-91379270 | Msa0387430:CDS |
| ATTTGATTTGCATGTGCAGA+TGG | 0.559789 | 3_1:+91379361 | None:intergenic |
| AATATCTGTTTCAACTGCAG+AGG | 0.560462 | 3_1:-91378704 | Msa0387430:intron |
| CCGGAAGAAAAGGATTTACA+AGG | 0.568192 | 3_1:-91379072 | Msa0387430:CDS |
| ATTGAAAGTGAGATATGTCA+AGG | 0.573844 | 3_1:-91379236 | Msa0387430:CDS |
| TCTTGTGACCAAACAATGAA+GGG | 0.576525 | 3_1:-91379322 | Msa0387430:CDS |
| GTCAATTACTGAATCTAACA+AGG | 0.580889 | 3_1:-91378588 | Msa0387430:CDS |
| CAGTGCATGGAACAATTGAC+GGG | 0.580953 | 3_1:-91377532 | Msa0387430:CDS |
| GAGTTGAAAGAGACTTCTGC+AGG | 0.582564 | 3_1:-91378533 | Msa0387430:CDS |
| CTGGGTTCTGAACAGCTGAA+AGG | 0.586271 | 3_1:-91377476 | Msa0387430:intron |
| TATATAGTCACGGTGGACCT+GGG | 0.588733 | 3_1:-91377494 | Msa0387430:CDS |
| GAGATATGTCAAGGGACAGA+AGG | 0.592127 | 3_1:-91379227 | Msa0387430:intron |
| ACTAGTATGCAATCCATGCA+TGG | 0.592882 | 3_1:-91378555 | Msa0387430:CDS |
| ACTTCTTCCAAGAAAAGAAG+AGG | 0.593684 | 3_1:-91378509 | Msa0387430:CDS |
| TCTTGCAACTGGGATTCTGG+AGG | 0.593767 | 3_1:-91379260 | Msa0387430:CDS |
| GGAATCAGGCAAGTAAATGG+AGG | 0.597083 | 3_1:-91379002 | Msa0387430:CDS |
| AAAGAGGTCCAAATGGTCCT+GGG | 0.599169 | 3_1:-91378749 | Msa0387430:CDS |
| GAGGTTTCCTGTCAAGCTGA+AGG | 0.603772 | 3_1:-91379287 | Msa0387430:CDS |
| CTTTCAGCTGTTCAGAACCC+AGG | 0.626176 | 3_1:+91377477 | None:intergenic |
| ATTGACGGGAAATTTGATGA+CGG | 0.626327 | 3_1:-91377518 | Msa0387430:CDS |
| GAAGAACCGAGTGTCTGTGT+TGG | 0.627877 | 3_1:+91377554 | None:intergenic |
| ACACTCGGTTCTTCAGTGCA+TGG | 0.628634 | 3_1:-91377545 | Msa0387430:CDS |
| GAATCAGGCAAGTAAATGGA+GGG | 0.637456 | 3_1:-91379001 | Msa0387430:CDS |
| TCTTTATCCAATGTATCCAA+CGG | 0.644524 | 3_1:+91378767 | None:intergenic |
| TTGAAAGTGAGATATGTCAA+GGG | 0.671458 | 3_1:-91379235 | Msa0387430:CDS |
| TCAATTACTGAATCTAACAA+GGG | 0.676694 | 3_1:-91378587 | Msa0387430:CDS |
| TGATGACGGATATATAGTCA+CGG | 0.676944 | 3_1:-91377504 | Msa0387430:CDS |
| ATTAGTCCAACACAGACACT+CGG | 0.678407 | 3_1:-91377560 | Msa0387430:CDS |
| TGTGACCAAACAATGAAGGG+AGG | 0.679689 | 3_1:-91379319 | Msa0387430:CDS |
| AGGCATTCATGACATCCCGA+AGG | 0.693693 | 3_1:+91378801 | None:intergenic |
| TCAAGGTAAGTATAATCCGG+AGG | 0.695456 | 3_1:+91378836 | None:intergenic |
| TCTGCATTGTGAAATCACCC+AGG | 0.713370 | 3_1:+91378732 | None:intergenic |
| TGACGGATATATAGTCACGG+TGG | 0.799576 | 3_1:-91377501 | Msa0387430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTCTTTTAAGTTTTTTT+TGG | + | chr3_1:91375676-91375695 | None:intergenic | 10.0% |
| !!! | ATAAATCTATAAATGTTTTA+AGG | + | chr3_1:91378804-91378823 | None:intergenic | 10.0% |
| !!! | ACTTAAAAGAATTTTTGAAA+TGG | - | chr3_1:91375682-91375701 | Msa0387430:intron | 15.0% |
| !!! | CTTAAAAGAATTTTTGAAAT+GGG | - | chr3_1:91375683-91375702 | Msa0387430:intron | 15.0% |
| !!! | TGAAATTTTGAATTATTGTA+AGG | + | chr3_1:91377897-91377916 | None:intergenic | 15.0% |
| !!! | TTCAAGAATTTTTATAAGAT+CGG | - | chr3_1:91378063-91378082 | Msa0387430:intron | 15.0% |
| !!! | ATTTTAAGAAGAAAAGAAAA+GGG | - | chr3_1:91378139-91378158 | Msa0387430:intron | 15.0% |
| !! | TAAAATTAGTAATATCTGTA+TGG | - | chr3_1:91378477-91378496 | Msa0387430:CDS | 15.0% |
| !! | AACATTTATAGATTTATTGT+CGG | - | chr3_1:91378807-91378826 | Msa0387430:CDS | 15.0% |
| !! | AAAATCTACTTATGAAAAAA+TGG | - | chr3_1:91379025-91379044 | Msa0387430:CDS | 15.0% |
| !!! | TTATTTTGTTAATTTAATGC+AGG | - | chr3_1:91379446-91379465 | Msa0387430:intron | 15.0% |
| !!! | GTATATTGTTTTGAACTTTT+CGG | - | chr3_1:91375910-91375929 | Msa0387430:intron | 20.0% |
| !!! | TGATTTTTTTGTTTTGAAAC+TGG | - | chr3_1:91376977-91376996 | Msa0387430:intron | 20.0% |
| !!! | TTTCTTTTTATGCTTTTGAA+TGG | - | chr3_1:91377796-91377815 | Msa0387430:intron | 20.0% |
| !!! | GATTTTAAGAAGAAAAGAAA+AGG | - | chr3_1:91378138-91378157 | Msa0387430:intron | 20.0% |
| !!! | GAGTTTTTTTTTCTTTCTTG+TGG | - | chr3_1:91375970-91375989 | Msa0387430:intron | 25.0% |
| !!! | TTATTGTTTTTTTGCTTGTG+TGG | - | chr3_1:91376143-91376162 | Msa0387430:intron | 25.0% |
| !!! | TATTGTTTTTTTGCTTGTGT+GGG | - | chr3_1:91376144-91376163 | Msa0387430:intron | 25.0% |
| !!! | AATTTTGATGAACTGTTTGT+AGG | - | chr3_1:91376504-91376523 | Msa0387430:intron | 25.0% |
| !!! | ATTTTGATGAACTGTTTGTA+GGG | - | chr3_1:91376505-91376524 | Msa0387430:intron | 25.0% |
| ! | TCAATTACTGAATCTAACAA+GGG | - | chr3_1:91376528-91376547 | Msa0387430:intron | 25.0% |
| ! | TCAAAAAATAAGAGAGAAGA+AGG | - | chr3_1:91376648-91376667 | Msa0387430:intron | 25.0% |
| !!! | TGTAATACCTCTTATTTTCT+TGG | + | chr3_1:91376709-91376728 | None:intergenic | 25.0% |
| ! | TTGTATGTTTACAAGTTTCT+AGG | + | chr3_1:91376735-91376754 | None:intergenic | 25.0% |
| !! | TGAAATATTTTTCTGTGATG+TGG | - | chr3_1:91376872-91376891 | Msa0387430:intron | 25.0% |
| !! | TCGTTTCTTTAATTTAGACT+TGG | - | chr3_1:91377033-91377052 | Msa0387430:intron | 25.0% |
| ! | ATTATGACATCGTTTAATCT+GGG | - | chr3_1:91377130-91377149 | Msa0387430:intron | 25.0% |
| ! | AACAAAGTTCTTATCTATGT+TGG | - | chr3_1:91377469-91377488 | Msa0387430:intron | 25.0% |
| !! | ATATCTGGAATAGTTTATTC+AGG | - | chr3_1:91378383-91378402 | Msa0387430:intron | 25.0% |
| ! | AAATACATTTGTTCTCTGAT+TGG | - | chr3_1:91378551-91378570 | Msa0387430:CDS | 25.0% |
| ! | AAAAGACAACATCATAACTA+TGG | + | chr3_1:91378905-91378924 | None:intergenic | 25.0% |
| !!! | TCATAAGTAGATTTTGAAAG+TGG | + | chr3_1:91379020-91379039 | None:intergenic | 25.0% |
| ! | TTATGAAAAAATGGCTTCTT+AGG | - | chr3_1:91379034-91379053 | Msa0387430:CDS | 25.0% |
| ! | TCTTAGGTCTATATGAAAAT+AGG | - | chr3_1:91379050-91379069 | Msa0387430:CDS | 25.0% |
| ! | CTTAGGTCTATATGAAAATA+GGG | - | chr3_1:91379051-91379070 | Msa0387430:CDS | 25.0% |
| ! | AGGGCTATAATATAATAGTA+AGG | - | chr3_1:91379070-91379089 | Msa0387430:CDS | 25.0% |
| ! | TCTTCGAATTAATTAGTATG+CGG | - | chr3_1:91379116-91379135 | Msa0387430:intron | 25.0% |
| ! | AAGTTGCATAATCATATGAA+TGG | + | chr3_1:91379169-91379188 | None:intergenic | 25.0% |
| !!! | TAGAACTTGGTCTTATATTT+TGG | - | chr3_1:91379395-91379414 | Msa0387430:CDS | 25.0% |
| GGTAACAGTTATTAATGAGT+TGG | - | chr3_1:91375704-91375723 | Msa0387430:intron | 30.0% | |
| ATTGAAAGTGAGATATGTCA+AGG | - | chr3_1:91375879-91375898 | Msa0387430:intron | 30.0% | |
| TTGAAAGTGAGATATGTCAA+GGG | - | chr3_1:91375880-91375899 | Msa0387430:intron | 30.0% | |
| !! | GTTTTGAACTTTTCGGATTT+TGG | - | chr3_1:91375917-91375936 | Msa0387430:intron | 30.0% |
| GTGAAATTGTGAATGATGTT+AGG | - | chr3_1:91375948-91375967 | Msa0387430:intron | 30.0% | |
| TTTATTCGTGAATGATGTGT+AGG | - | chr3_1:91376012-91376031 | Msa0387430:intron | 30.0% | |
| !!! | TGTTGTTTTTTGTTGAGAGT+AGG | - | chr3_1:91376206-91376225 | Msa0387430:intron | 30.0% |
| TTCTCAAGGTAAGTATAATC+CGG | + | chr3_1:91376285-91376304 | None:intergenic | 30.0% | |
| GATTATACTTACCTTGAGAA+TGG | - | chr3_1:91376285-91376304 | Msa0387430:intron | 30.0% | |
| TCTTTATCCAATGTATCCAA+CGG | + | chr3_1:91376351-91376370 | None:intergenic | 30.0% | |
| GTCAATTACTGAATCTAACA+AGG | - | chr3_1:91376527-91376546 | Msa0387430:intron | 30.0% | |
| !!! | TTCTGCAGAAGTAGTTTTTT+CGG | + | chr3_1:91376679-91376698 | None:intergenic | 30.0% |
| ACTTCTTCCAAGAAAATAAG+AGG | - | chr3_1:91376699-91376718 | Msa0387430:intron | 30.0% | |
| GGACGTATAGTCAATATTAT+TGG | + | chr3_1:91376778-91376797 | None:intergenic | 30.0% | |
| !!! | GAGTTTTGATTGACTTCTTT+TGG | - | chr3_1:91376914-91376933 | Msa0387430:intron | 30.0% |
| AGAAACGAATCATCTATGAA+TGG | + | chr3_1:91377021-91377040 | None:intergenic | 30.0% | |
| CATTATGACATCGTTTAATC+TGG | - | chr3_1:91377129-91377148 | Msa0387430:intron | 30.0% | |
| ! | TGTTTGAAGTAATGCATCTA+AGG | - | chr3_1:91377674-91377693 | Msa0387430:intron | 30.0% |
| ! | GTTTGAAGTAATGCATCTAA+GGG | - | chr3_1:91377675-91377694 | Msa0387430:intron | 30.0% |
| TATATCGACCGAAATCAAAT+AGG | - | chr3_1:91377762-91377781 | Msa0387430:intron | 30.0% | |
| ! | TAACCACTCCTATTTGATTT+CGG | + | chr3_1:91377773-91377792 | None:intergenic | 30.0% |
| ! | ATGCTTTTGAATGGCTTATT+TGG | - | chr3_1:91377805-91377824 | Msa0387430:intron | 30.0% |
| AGTTAAGAAACCAACAAGAA+AGG | + | chr3_1:91378192-91378211 | None:intergenic | 30.0% | |
| GGAAAGGTTAATTGTATATC+TGG | - | chr3_1:91378368-91378387 | Msa0387430:intron | 30.0% | |
| AATAGTTTATTCAGGCACAT+AGG | - | chr3_1:91378391-91378410 | Msa0387430:intron | 30.0% | |
| !! | TCATTTTTGTCTTGCAAATC+AGG | - | chr3_1:91378423-91378442 | Msa0387430:CDS | 30.0% |
| ! | AAAGCAGTGTTGTTAAATAG+AGG | - | chr3_1:91378591-91378610 | Msa0387430:CDS | 30.0% |
| TAATAGATCACTAGACAACA+GGG | + | chr3_1:91378683-91378702 | None:intergenic | 30.0% | |
| ATAATAGATCACTAGACAAC+AGG | + | chr3_1:91378684-91378703 | None:intergenic | 30.0% | |
| GTACAAGATTATAAAGTAGC+AGG | - | chr3_1:91378862-91378881 | Msa0387430:CDS | 30.0% | |
| !! | AGACCTAACTATTTTTCTAC+TGG | - | chr3_1:91378965-91378984 | Msa0387430:intron | 30.0% |
| AAGCCAGTAGAAAAATAGTT+AGG | + | chr3_1:91378971-91378990 | None:intergenic | 30.0% | |
| TCTCACTACATAGATGATAA+TGG | + | chr3_1:91379219-91379238 | None:intergenic | 30.0% | |
| !! | ATTTGATTTGCATGTGCAGA+TGG | + | chr3_1:91375757-91375776 | None:intergenic | 35.0% |
| TTCTTGTGACCAAACAATGA+AGG | - | chr3_1:91375792-91375811 | Msa0387430:intron | 35.0% | |
| TCTTGTGACCAAACAATGAA+GGG | - | chr3_1:91375793-91375812 | Msa0387430:intron | 35.0% | |
| ! | CCTTGTAAATCCTTTTCTTC+CGG | + | chr3_1:91376046-91376065 | None:intergenic | 35.0% |
| ! | TCAGGAATTTTGTGCTTTTG+TGG | - | chr3_1:91376079-91376098 | Msa0387430:intron | 35.0% |
| ! | CAGGAATTTTGTGCTTTTGT+GGG | - | chr3_1:91376080-91376099 | Msa0387430:intron | 35.0% |
| GCATGCAACTCAAAAACATT+CGG | + | chr3_1:91376240-91376259 | None:intergenic | 35.0% | |
| !!! | AATGTTTTTGAGTTGCATGC+TGG | - | chr3_1:91376240-91376259 | Msa0387430:intron | 35.0% |
| TTGAGAATGGAAAACTCCTT+CGG | - | chr3_1:91376298-91376317 | Msa0387430:intron | 35.0% | |
| GTTGGATACATTGGATAAAG+AGG | - | chr3_1:91376350-91376369 | Msa0387430:intron | 35.0% | |
| ATTGGATAAAGAGGTCCAAA+TGG | - | chr3_1:91376359-91376378 | Msa0387430:intron | 35.0% | |
| AATATCTGTTTCAACTGCAG+AGG | - | chr3_1:91376411-91376430 | Msa0387430:intron | 35.0% | |
| AATTACATAGTGTCACAGCT+AGG | + | chr3_1:91376460-91376479 | None:intergenic | 35.0% | |
| ACTTCTTCCAAGAAAAGAAG+AGG | - | chr3_1:91376606-91376625 | Msa0387430:intron | 35.0% | |
| TATACGTCCATCATGAGTTA+GGG | - | chr3_1:91376789-91376808 | Msa0387430:intron | 35.0% | |
| ATGTATACCCTAACTCATGA+TGG | + | chr3_1:91376799-91376818 | None:intergenic | 35.0% | |
| GTGATGTGGAAATAGAAGTA+AGG | - | chr3_1:91376886-91376905 | Msa0387430:intron | 35.0% | |
| TCTATCATAAGTTGTGTCGA+TGG | + | chr3_1:91377108-91377127 | None:intergenic | 35.0% | |
| !! | ATCGAAAGCTTTATTGCACT+AGG | + | chr3_1:91377168-91377187 | None:intergenic | 35.0% |
| ! | ATTTACTGCCAAAAGCACAT+AGG | - | chr3_1:91377204-91377223 | Msa0387430:intron | 35.0% |
| ! | AATAGTCACCTATGTGCTTT+TGG | + | chr3_1:91377215-91377234 | None:intergenic | 35.0% |
| AAAGCACATAGGTGACTATT+TGG | - | chr3_1:91377215-91377234 | Msa0387430:intron | 35.0% | |
| AAGCACATAGGTGACTATTT+GGG | - | chr3_1:91377216-91377235 | Msa0387430:intron | 35.0% | |
| AAACTCTCCTAGAGAACTAA+TGG | - | chr3_1:91377301-91377320 | Msa0387430:intron | 35.0% | |
| ATTGACGGGAAATTTGATGA+CGG | - | chr3_1:91377597-91377616 | Msa0387430:intron | 35.0% | |
| !! | TGATGACGGATATATAGTCA+CGG | - | chr3_1:91377611-91377630 | Msa0387430:intron | 35.0% |
| ATATGGGGGAACATTGAAAT+TGG | + | chr3_1:91377832-91377851 | None:intergenic | 35.0% | |
| ATTTCAATGTTCCCCCATAT+TGG | - | chr3_1:91377832-91377851 | Msa0387430:intron | 35.0% | |
| TTTCAATGTTCCCCCATATT+GGG | - | chr3_1:91377833-91377852 | Msa0387430:intron | 35.0% | |
| GTTTCTTAACTCCCAAACAA+GGG | - | chr3_1:91378201-91378220 | Msa0387430:intron | 35.0% | |
| AGCCTTAACATATTTGTCTC+TGG | - | chr3_1:91378315-91378334 | Msa0387430:intron | 35.0% | |
| AGCCAGAGACAAATATGTTA+AGG | + | chr3_1:91378320-91378339 | None:intergenic | 35.0% | |
| GCTTGTTTAACGATGATGAA+GGG | - | chr3_1:91378337-91378356 | Msa0387430:intron | 35.0% | |
| CTTGTTTAACGATGATGAAG+GGG | - | chr3_1:91378338-91378357 | Msa0387430:intron | 35.0% | |
| AGTTAACGTGCATCAAGTTA+TGG | + | chr3_1:91378524-91378543 | None:intergenic | 35.0% | |
| !!! | CATTTTTTGCAATCTCCGAT+CGG | - | chr3_1:91378654-91378673 | Msa0387430:intron | 35.0% |
| ! | AATTCCATGAATCCCACTTT+TGG | + | chr3_1:91378779-91378798 | None:intergenic | 35.0% |
| CTATGGCTACAACTAGAAAA+GGG | + | chr3_1:91378888-91378907 | None:intergenic | 35.0% | |
| ACTATGGCTACAACTAGAAA+AGG | + | chr3_1:91378889-91378908 | None:intergenic | 35.0% | |
| GTATACACTATAAAGCCTGT+GGG | + | chr3_1:91378945-91378964 | None:intergenic | 35.0% | |
| TGTATACACTATAAAGCCTG+TGG | + | chr3_1:91378946-91378965 | None:intergenic | 35.0% | |
| !!! | TTTTCTACTGGCTTCTTAAG+AGG | - | chr3_1:91378977-91378996 | Msa0387430:intron | 35.0% |
| TCTATGTAGTGAGATGTGAT+TGG | - | chr3_1:91379225-91379244 | Msa0387430:intron | 35.0% | |
| TGCTCTTATCTGTTAGAACT+TGG | - | chr3_1:91379382-91379401 | Msa0387430:CDS | 35.0% | |
| TGCAGGTTTATCAGAAGAAA+AGG | - | chr3_1:91379463-91379482 | Msa0387430:intron | 35.0% | |
| CACAAGAAGAGAGAGAAAGA+TGG | + | chr3_1:91375780-91375799 | None:intergenic | 40.0% | |
| TGAAGGATCTTCTTGCAACT+GGG | - | chr3_1:91375845-91375864 | Msa0387430:intron | 40.0% | |
| !! | GAACTTTTCGGATTTTGGTC+TGG | - | chr3_1:91375922-91375941 | Msa0387430:intron | 40.0% |
| CCGGAAGAAAAGGATTTACA+AGG | - | chr3_1:91376043-91376062 | Msa0387430:intron | 40.0% | |
| CAAGGTGTGATCAAAGATTC+AGG | - | chr3_1:91376061-91376080 | Msa0387430:intron | 40.0% | |
| ! | TGCTTTTGTGGGAGTTGTAA+GGG | - | chr3_1:91376091-91376110 | Msa0387430:intron | 40.0% |
| GAATCAGGCAAGTAAATGGA+GGG | - | chr3_1:91376114-91376133 | Msa0387430:intron | 40.0% | |
| TAGTCCTAATAAACGTCCTC+CGG | - | chr3_1:91376263-91376282 | Msa0387430:intron | 40.0% | |
| TAATCCGGAGGACGTTTATT+AGG | + | chr3_1:91376270-91376289 | None:intergenic | 40.0% | |
| TCAAGGTAAGTATAATCCGG+AGG | + | chr3_1:91376282-91376301 | None:intergenic | 40.0% | |
| ! | GAAGGAGTTTTCCATTCTCA+AGG | + | chr3_1:91376299-91376318 | None:intergenic | 40.0% |
| TGAGAATGGAAAACTCCTTC+GGG | - | chr3_1:91376299-91376318 | Msa0387430:intron | 40.0% | |
| AAGTCTTCCGTTGGATACAT+TGG | - | chr3_1:91376341-91376360 | Msa0387430:intron | 40.0% | |
| ACTAGTATGCAATCCATGCA+TGG | - | chr3_1:91376560-91376579 | Msa0387430:intron | 40.0% | |
| !!! | GCAGAAGTAGTTTTTTCGGA+AGG | + | chr3_1:91376675-91376694 | None:intergenic | 40.0% |
| CTATACGTCCATCATGAGTT+AGG | - | chr3_1:91376788-91376807 | Msa0387430:intron | 40.0% | |
| TGACTATTTGGGAGAGCTTA+TGG | - | chr3_1:91377227-91377246 | Msa0387430:intron | 40.0% | |
| TTGGGAGAGCTTATGGATAT+TGG | - | chr3_1:91377234-91377253 | Msa0387430:intron | 40.0% | |
| ! | GCTGTTTCCATTAGTTCTCT+AGG | + | chr3_1:91377311-91377330 | None:intergenic | 40.0% |
| AGTGTCTGTGTTGGACTAAT+TGG | + | chr3_1:91377555-91377574 | None:intergenic | 40.0% | |
| ATTAGTCCAACACAGACACT+CGG | - | chr3_1:91377555-91377574 | Msa0387430:CDS | 40.0% | |
| TCAGTGCATGGAACAATTGA+CGG | - | chr3_1:91377582-91377601 | Msa0387430:intron | 40.0% | |
| TTCAATGTTCCCCCATATTG+GGG | - | chr3_1:91377834-91377853 | Msa0387430:intron | 40.0% | |
| AGCATAAGCTCCTTTCTTGT+TGG | - | chr3_1:91378179-91378198 | Msa0387430:intron | 40.0% | |
| GGTTTCTTAACTCCCAAACA+AGG | - | chr3_1:91378200-91378219 | Msa0387430:intron | 40.0% | |
| TTAACTCCCAAACAAGGGAA+GGG | - | chr3_1:91378206-91378225 | Msa0387430:intron | 40.0% | |
| !!! | CTTTGTTTGCGAGTTTTGAG+GGG | + | chr3_1:91378297-91378316 | None:intergenic | 40.0% |
| !!! | GCTTTGTTTGCGAGTTTTGA+GGG | + | chr3_1:91378298-91378317 | None:intergenic | 40.0% |
| ! | GGCTTGTTTAACGATGATGA+AGG | - | chr3_1:91378336-91378355 | Msa0387430:intron | 40.0% |
| TCTGATTGGCAAACTAAGCT+AGG | - | chr3_1:91378565-91378584 | Msa0387430:CDS | 40.0% | |
| CGATCGGAGATTGCAAAAAA+TGG | + | chr3_1:91378656-91378675 | None:intergenic | 40.0% | |
| GTTTCGCAAATGAAAGGCTA+AGG | + | chr3_1:91378733-91378752 | None:intergenic | 40.0% | |
| AAGGCAGTTTCGCAAATGAA+AGG | + | chr3_1:91378739-91378758 | None:intergenic | 40.0% | |
| TTCCTTGGAAAAGCCAAAAG+TGG | - | chr3_1:91378763-91378782 | Msa0387430:CDS | 40.0% | |
| TCCTTGGAAAAGCCAAAAGT+GGG | - | chr3_1:91378764-91378783 | Msa0387430:CDS | 40.0% | |
| AAAGCCAAAAGTGGGATTCA+TGG | - | chr3_1:91378772-91378791 | Msa0387430:CDS | 40.0% | |
| TTATTGTCGGAGTGTGTGAA+AGG | - | chr3_1:91378820-91378839 | Msa0387430:CDS | 40.0% | |
| TGTGACCAAACAATGAAGGG+AGG | - | chr3_1:91375796-91375815 | Msa0387430:intron | 45.0% | |
| CAGAACCTCCCTTCATTGTT+TGG | + | chr3_1:91375804-91375823 | None:intergenic | 45.0% | |
| CAAACAATGAAGGGAGGTTC+TGG | - | chr3_1:91375802-91375821 | Msa0387430:intron | 45.0% | |
| AGAAGATCCTTCAGCTTGAC+AGG | + | chr3_1:91375838-91375857 | None:intergenic | 45.0% | |
| CTGAAGGATCTTCTTGCAAC+TGG | - | chr3_1:91375844-91375863 | Msa0387430:intron | 45.0% | |
| TCTTCTTGCAACTGGGATTC+TGG | - | chr3_1:91375852-91375871 | Msa0387430:intron | 45.0% | |
| GAGATATGTCAAGGGACAGA+AGG | - | chr3_1:91375888-91375907 | Msa0387430:intron | 45.0% | |
| ! | GTGCTTTTGTGGGAGTTGTA+AGG | - | chr3_1:91376090-91376109 | Msa0387430:intron | 45.0% |
| ! | GCTTTTGTGGGAGTTGTAAG+GGG | - | chr3_1:91376092-91376111 | Msa0387430:intron | 45.0% |
| AGGGGAATCAGGCAAGTAAA+TGG | - | chr3_1:91376110-91376129 | Msa0387430:intron | 45.0% | |
| GGAATCAGGCAAGTAAATGG+AGG | - | chr3_1:91376113-91376132 | Msa0387430:intron | 45.0% | |
| GGCAAGTAAATGGAGGGATA+TGG | - | chr3_1:91376120-91376139 | Msa0387430:intron | 45.0% | |
| GTGTGGGTTTAGCATCTTGT+AGG | - | chr3_1:91376160-91376179 | Msa0387430:intron | 45.0% | |
| ATCCAACGGAAGACTTGAAC+AGG | + | chr3_1:91376337-91376356 | None:intergenic | 45.0% | |
| TAAAGAGGTCCAAATGGTCC+TGG | - | chr3_1:91376365-91376384 | Msa0387430:intron | 45.0% | |
| AAAGAGGTCCAAATGGTCCT+GGG | - | chr3_1:91376366-91376385 | Msa0387430:intron | 45.0% | |
| TGAAATCACCCAGGACCATT+TGG | + | chr3_1:91376377-91376396 | None:intergenic | 45.0% | |
| TCTGCATTGTGAAATCACCC+AGG | + | chr3_1:91376386-91376405 | None:intergenic | 45.0% | |
| GTCTCTTTCAACTCCATGCA+TGG | + | chr3_1:91376576-91376595 | None:intergenic | 45.0% | |
| GAGTTGAAAGAGACTTCTGC+AGG | - | chr3_1:91376582-91376601 | Msa0387430:intron | 45.0% | |
| ! | AGCGCATCCTCTTCTTTTCT+TGG | + | chr3_1:91376616-91376635 | None:intergenic | 45.0% |
| AAAAGAAGAGGATGCGCTCT+TGG | - | chr3_1:91376618-91376637 | Msa0387430:intron | 45.0% | |
| CAGTGCATGGAACAATTGAC+GGG | - | chr3_1:91377583-91377602 | Msa0387430:intron | 45.0% | |
| ! | TGACGGATATATAGTCACGG+TGG | - | chr3_1:91377614-91377633 | Msa0387430:intron | 45.0% |
| ATATATAGTCACGGTGGACC+TGG | - | chr3_1:91377620-91377639 | Msa0387430:intron | 45.0% | |
| TATATAGTCACGGTGGACCT+GGG | - | chr3_1:91377621-91377640 | Msa0387430:intron | 45.0% | |
| GCATCTAAGGGTTCTTCGAT+TGG | - | chr3_1:91377687-91377706 | Msa0387430:intron | 45.0% | |
| TCTAAGGGTTCTTCGATTGG+AGG | - | chr3_1:91377690-91377709 | Msa0387430:intron | 45.0% | |
| CGACCGAAATCAAATAGGAG+TGG | - | chr3_1:91377767-91377786 | Msa0387430:intron | 45.0% | |
| TCAATGTTCCCCCATATTGG+GGG | - | chr3_1:91377835-91377854 | Msa0387430:intron | 45.0% | |
| CTTAACTCCCAAACAAGGGA+AGG | - | chr3_1:91378205-91378224 | Msa0387430:intron | 45.0% | |
| ! | GGAAAACCCTTCCCTTGTTT+GGG | + | chr3_1:91378215-91378234 | None:intergenic | 45.0% |
| TTTGAGGGGAAGGAAAGGAA+CGG | + | chr3_1:91378283-91378302 | None:intergenic | 45.0% | |
| !!! | GGCTTTGTTTGCGAGTTTTG+AGG | + | chr3_1:91378299-91378318 | None:intergenic | 45.0% |
| GTTTAACGATGATGAAGGGG+AGG | - | chr3_1:91378341-91378360 | Msa0387430:intron | 45.0% | |
| ATGAAGGGGAGGTAAAGGAA+AGG | - | chr3_1:91378352-91378371 | Msa0387430:intron | 45.0% | |
| GAAACTGCCTTGATGTTCCT+TGG | - | chr3_1:91378748-91378767 | Msa0387430:CDS | 45.0% | |
| ! | GGCTTTTCCAAGGAACATCA+AGG | + | chr3_1:91378758-91378777 | None:intergenic | 45.0% |
| !!! | TCCCACTTTTGGCTTTTCCA+AGG | + | chr3_1:91378768-91378787 | None:intergenic | 45.0% |
| !!! | ATTTCATAATTATTATTTTT+AGG | + | chr3_1:91377970-91377989 | None:intergenic | 5.0% |
| !! | AATAATAATTATGAAATAAA+AGG | - | chr3_1:91377973-91377992 | Msa0387430:intron | 5.0% |
| ! | TGAAGGGAGGTTCTGGTAAG+AGG | - | chr3_1:91375809-91375828 | Msa0387430:intron | 50.0% |
| GAGGTTTCCTGTCAAGCTGA+AGG | - | chr3_1:91375828-91375847 | Msa0387430:intron | 50.0% | |
| TCTTGCAACTGGGATTCTGG+AGG | - | chr3_1:91375855-91375874 | Msa0387430:intron | 50.0% | |
| CTTGCAACTGGGATTCTGGA+GGG | - | chr3_1:91375856-91375875 | Msa0387430:intron | 50.0% | |
| TGATGTGTAGGCGCGTAAAC+CGG | - | chr3_1:91376024-91376043 | Msa0387430:intron | 50.0% | |
| TGGGAGTTGTAAGGGGAATC+AGG | - | chr3_1:91376099-91376118 | Msa0387430:intron | 50.0% | |
| AGGCATTCATGACATCCCGA+AGG | + | chr3_1:91376317-91376336 | None:intergenic | 50.0% | |
| TGCCTGTTCAAGTCTTCCGT+TGG | - | chr3_1:91376332-91376351 | Msa0387430:intron | 50.0% | |
| AGAGGATGCGCTCTTGGTTT+CGG | - | chr3_1:91376624-91376643 | Msa0387430:intron | 50.0% | |
| GAAGAACCGAGTGTCTGTGT+TGG | + | chr3_1:91377564-91377583 | None:intergenic | 50.0% | |
| ACACTCGGTTCTTCAGTGCA+TGG | - | chr3_1:91377570-91377589 | Msa0387430:CDS | 50.0% | |
| CTTTCAGCTGTTCAGAACCC+AGG | + | chr3_1:91377641-91377660 | None:intergenic | 50.0% | |
| !! | CTGGGTTCTGAACAGCTGAA+AGG | - | chr3_1:91377639-91377658 | Msa0387430:intron | 50.0% |
| ! | TCCCCCATATTGGGGGTTTT+CGG | - | chr3_1:91377842-91377861 | Msa0387430:intron | 50.0% |
| GGGAAAACCCTTCCCTTGTT+TGG | + | chr3_1:91378216-91378235 | None:intergenic | 50.0% | |
| AGGAAAGGAACGGCTAAGGA+GGG | + | chr3_1:91378273-91378292 | None:intergenic | 50.0% | |
| AAGGAAAGGAACGGCTAAGG+AGG | + | chr3_1:91378274-91378293 | None:intergenic | 50.0% | |
| !!! | CGAGTTTTGAGGGGAAGGAA+AGG | + | chr3_1:91378288-91378307 | None:intergenic | 50.0% |
| !!! | GTTTGCGAGTTTTGAGGGGA+AGG | + | chr3_1:91378293-91378312 | None:intergenic | 50.0% |
| CGATGATGAAGGGGAGGTAA+AGG | - | chr3_1:91378347-91378366 | Msa0387430:intron | 50.0% | |
| TAGACAACAGGGTTGCCGAT+CGG | + | chr3_1:91378672-91378691 | None:intergenic | 50.0% | |
| ! | GCATTTGAGATTGCTCCCAC+AGG | - | chr3_1:91378927-91378946 | Msa0387430:intron | 50.0% |
| GGCGCGTAAACCGGAAGAAA+AGG | - | chr3_1:91376033-91376052 | Msa0387430:intron | 55.0% | |
| CCCGAAAACCCCCAATATGG+GGG | + | chr3_1:91377846-91377865 | None:intergenic | 55.0% | |
| ! | CCCCCATATTGGGGGTTTTC+GGG | - | chr3_1:91377843-91377862 | Msa0387430:intron | 55.0% |
| CCCCGAAAACCCCCAATATG+GGG | + | chr3_1:91377847-91377866 | None:intergenic | 55.0% | |
| ! | CCCCATATTGGGGGTTTTCG+GGG | - | chr3_1:91377844-91377863 | Msa0387430:intron | 55.0% |
| CCCCCGAAAACCCCCAATAT+GGG | + | chr3_1:91377848-91377867 | None:intergenic | 55.0% | |
| ! | CCCATATTGGGGGTTTTCGG+GGG | - | chr3_1:91377845-91377864 | Msa0387430:intron | 55.0% |
| !! | CCATATTGGGGGTTTTCGGG+GGG | - | chr3_1:91377846-91377865 | Msa0387430:intron | 55.0% |
| GAAAGGAACGGCTAAGGAGG+GGG | + | chr3_1:91378271-91378290 | None:intergenic | 55.0% | |
| GGAAAGGAACGGCTAAGGAG+GGG | + | chr3_1:91378272-91378291 | None:intergenic | 55.0% | |
| GGGAAGGAAAGGAACGGCTA+AGG | + | chr3_1:91378277-91378296 | None:intergenic | 55.0% | |
| CCCCCCGAAAACCCCCAATA+TGG | + | chr3_1:91377849-91377868 | None:intergenic | 60.0% | |
| GCTAAGGAGGGGGAAGGGAA+GGG | + | chr3_1:91378261-91378280 | None:intergenic | 60.0% | |
| GAACGGCTAAGGAGGGGGAA+GGG | + | chr3_1:91378266-91378285 | None:intergenic | 60.0% | |
| ACTATTGCGCTGCTGCGCAG+CGG | - | chr3_1:91378615-91378634 | Msa0387430:intron | 60.0% | |
| GGGAGAGGAGGGGGAAAGGA+GGG | + | chr3_1:91378236-91378255 | None:intergenic | 65.0% | |
| AGGGAAGGGAGGGGAGAGGA+GGG | + | chr3_1:91378247-91378266 | None:intergenic | 65.0% | |
| AAGGGAAGGGAGGGGAGAGG+AGG | + | chr3_1:91378248-91378267 | None:intergenic | 65.0% | |
| AGGAGGGGGAAGGGAAGGGA+GGG | + | chr3_1:91378257-91378276 | None:intergenic | 65.0% | |
| AAGGAGGGGGAAGGGAAGGG+AGG | + | chr3_1:91378258-91378277 | None:intergenic | 65.0% | |
| GGCTAAGGAGGGGGAAGGGA+AGG | + | chr3_1:91378262-91378281 | None:intergenic | 65.0% | |
| GGAACGGCTAAGGAGGGGGA+AGG | + | chr3_1:91378267-91378286 | None:intergenic | 65.0% | |
| GGGGAGAGGAGGGGGAAAGG+AGG | + | chr3_1:91378237-91378256 | None:intergenic | 70.0% | |
| GGAGGGGAGAGGAGGGGGAA+AGG | + | chr3_1:91378240-91378259 | None:intergenic | 70.0% | |
| GGAAGGGAGGGGAGAGGAGG+GGG | + | chr3_1:91378245-91378264 | None:intergenic | 70.0% | |
| GGGAAGGGAGGGGAGAGGAG+GGG | + | chr3_1:91378246-91378265 | None:intergenic | 70.0% | |
| GGGAAGGGAAGGGAGGGGAG+AGG | + | chr3_1:91378251-91378270 | None:intergenic | 70.0% | |
| GGAGGGGGAAGGGAAGGGAG+GGG | + | chr3_1:91378256-91378275 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 91375641 | 91379496 | 91375641 | ID=Msa0387430;Name=Msa0387430 |
| chr3_1 | mRNA | 91375641 | 91379496 | 91375641 | ID=Msa0387430-mRNA-1;Parent=Msa0387430;Name=Msa0387430-mRNA-1;_AED=0.45;_eAED=0.45;_QI=0|0|0|0.85|0.66|0.42|7|0|283 |
| chr3_1 | exon | 91379494 | 91379496 | 91379494 | ID=Msa0387430-mRNA-1:exon:25506;Parent=Msa0387430-mRNA-1 |
| chr3_1 | exon | 91379228 | 91379425 | 91379228 | ID=Msa0387430-mRNA-1:exon:25505;Parent=Msa0387430-mRNA-1 |
| chr3_1 | exon | 91378996 | 91379103 | 91378996 | ID=Msa0387430-mRNA-1:exon:25504;Parent=Msa0387430-mRNA-1 |
| chr3_1 | exon | 91378705 | 91378909 | 91378705 | ID=Msa0387430-mRNA-1:exon:25503;Parent=Msa0387430-mRNA-1 |
| chr3_1 | exon | 91378417 | 91378611 | 91378417 | ID=Msa0387430-mRNA-1:exon:25502;Parent=Msa0387430-mRNA-1 |
| chr3_1 | exon | 91377477 | 91377590 | 91377477 | ID=Msa0387430-mRNA-1:exon:25501;Parent=Msa0387430-mRNA-1 |
| chr3_1 | exon | 91375641 | 91375669 | 91375641 | ID=Msa0387430-mRNA-1:exon:25500;Parent=Msa0387430-mRNA-1 |
| chr3_1 | CDS | 91379494 | 91379496 | 91379494 | ID=Msa0387430-mRNA-1:cds;Parent=Msa0387430-mRNA-1 |
| chr3_1 | CDS | 91379228 | 91379425 | 91379228 | ID=Msa0387430-mRNA-1:cds;Parent=Msa0387430-mRNA-1 |
| chr3_1 | CDS | 91378996 | 91379103 | 91378996 | ID=Msa0387430-mRNA-1:cds;Parent=Msa0387430-mRNA-1 |
| chr3_1 | CDS | 91378705 | 91378909 | 91378705 | ID=Msa0387430-mRNA-1:cds;Parent=Msa0387430-mRNA-1 |
| chr3_1 | CDS | 91378417 | 91378611 | 91378417 | ID=Msa0387430-mRNA-1:cds;Parent=Msa0387430-mRNA-1 |
| chr3_1 | CDS | 91377477 | 91377590 | 91377477 | ID=Msa0387430-mRNA-1:cds;Parent=Msa0387430-mRNA-1 |
| chr3_1 | CDS | 91375641 | 91375669 | 91375641 | ID=Msa0387430-mRNA-1:cds;Parent=Msa0387430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
