Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218240 | XP_024632360.1 | 78.731 | 268 | 18 | 5 | 1 | 253 | 15 | 258 | 6.45e-137 | 396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218240 | A0A072VBD4 | 78.731 | 268 | 18 | 5 | 1 | 253 | 15 | 258 | 3.08e-137 | 396 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0218240 | 0.804246 | 2.368445e-49 | -8.615850e-47 |
| Msa0006110 | Msa0218240 | 0.813341 | 2.688841e-51 | -8.615850e-47 |
| Msa0011170 | Msa0218240 | 0.817652 | 2.951349e-52 | -8.615850e-47 |
| Msa0014710 | Msa0218240 | 0.833194 | 6.136240e-56 | -8.615850e-47 |
| Msa0017510 | Msa0218240 | 0.806416 | 8.314971e-50 | -8.615850e-47 |
| Msa0031340 | Msa0218240 | 0.802819 | 4.681022e-49 | -8.615850e-47 |
| Msa0034110 | Msa0218240 | 0.800970 | 1.122583e-48 | -8.615850e-47 |
| Msa0036140 | Msa0218240 | 0.830355 | 3.077143e-55 | -8.615850e-47 |
| Msa0045790 | Msa0218240 | 0.805683 | 1.185975e-49 | -8.615850e-47 |
| Msa0046160 | Msa0218240 | 0.807653 | 4.551384e-50 | -8.615850e-47 |
| Msa0052730 | Msa0218240 | 0.806367 | 8.514822e-50 | -8.615850e-47 |
| Msa0064970 | Msa0218240 | 0.822762 | 1.991817e-53 | -8.615850e-47 |
| Msa0068680 | Msa0218240 | 0.801291 | 9.652482e-49 | -8.615850e-47 |
| Msa0075880 | Msa0218240 | 0.815351 | 9.667463e-52 | -8.615850e-47 |
| Msa0084380 | Msa0218240 | 0.810932 | 9.014225e-51 | -8.615850e-47 |
| Msa0095560 | Msa0218240 | 0.820561 | 6.426425e-53 | -8.615850e-47 |
| Msa0116770 | Msa0218240 | 0.810688 | 1.018007e-50 | -8.615850e-47 |
| Msa0131770 | Msa0218240 | 0.807238 | 5.574153e-50 | -8.615850e-47 |
| Msa0142220 | Msa0218240 | 0.822635 | 2.131483e-53 | -8.615850e-47 |
| Msa0157290 | Msa0218240 | 0.805220 | 1.482708e-49 | -8.615850e-47 |
| Msa0158480 | Msa0218240 | 0.813097 | 3.040925e-51 | -8.615850e-47 |
| Msa0165210 | Msa0218240 | 0.828875 | 7.049975e-55 | -8.615850e-47 |
| Msa0199240 | Msa0218240 | 0.800590 | 1.342189e-48 | -8.615850e-47 |
| Msa0210450 | Msa0218240 | 0.807280 | 5.459982e-50 | -8.615850e-47 |
| Msa0212990 | Msa0218240 | 0.804697 | 1.907197e-49 | -8.615850e-47 |
| Msa0218240 | Msa0218270 | 0.894324 | 2.745887e-75 | -8.615850e-47 |
| Msa0218240 | Msa0219590 | 0.809193 | 2.135483e-50 | -8.615850e-47 |
| Msa0218240 | Msa0220580 | 0.815305 | 9.895427e-52 | -8.615850e-47 |
| Msa0218240 | Msa0220740 | 0.802408 | 5.689550e-49 | -8.615850e-47 |
| Msa0218240 | Msa0223410 | -0.826141 | 3.192947e-54 | -8.615850e-47 |
| Msa0218240 | Msa0260780 | 0.803429 | 3.500846e-49 | -8.615850e-47 |
| Msa0218240 | Msa0280090 | 0.801040 | 1.086349e-48 | -8.615850e-47 |
| Msa0218240 | Msa0285450 | 0.804070 | 2.576491e-49 | -8.615850e-47 |
| Msa0218240 | Msa0288100 | 0.801370 | 9.297933e-49 | -8.615850e-47 |
| Msa0218240 | Msa0305190 | 0.811742 | 6.012381e-51 | -8.615850e-47 |
| Msa0218240 | Msa0306210 | -0.820717 | 5.918228e-53 | -8.615850e-47 |
| Msa0218240 | Msa0326520 | 0.801048 | 1.081874e-48 | -8.615850e-47 |
| Msa0218240 | Msa0330340 | 0.808417 | 3.129311e-50 | -8.615850e-47 |
| Msa0218240 | Msa0339620 | 0.815045 | 1.130605e-51 | -8.615850e-47 |
| Msa0218240 | Msa0340470 | 0.808336 | 3.256428e-50 | -8.615850e-47 |
| Msa0218240 | Msa0344690 | -0.812423 | 4.271292e-51 | -8.615850e-47 |
| Msa0218240 | Msa0345970 | 0.819379 | 1.197660e-52 | -8.615850e-47 |
| Msa0218240 | Msa0355220 | 0.828579 | 8.313812e-55 | -8.615850e-47 |
| Msa0218240 | Msa0373450 | 0.802403 | 5.704065e-49 | -8.615850e-47 |
| Msa0218240 | Msa0381610 | -0.816158 | 6.386184e-52 | -8.615850e-47 |
| Msa0218240 | Msa0387430 | 0.815607 | 8.478054e-52 | -8.615850e-47 |
| Msa0218240 | Msa0402290 | 0.822031 | 2.944823e-53 | -8.615850e-47 |
| Msa0218240 | Msa0407960 | 0.806549 | 7.794295e-50 | -8.615850e-47 |
| Msa0218240 | Msa0433410 | -0.808425 | 3.117263e-50 | -8.615850e-47 |
| Msa0218240 | Msa0440750 | 0.839324 | 1.696006e-57 | -8.615850e-47 |
| Msa0218240 | Msa0455760 | 0.806763 | 7.025313e-50 | -8.615850e-47 |
| Msa0218240 | Msa0469940 | -0.810963 | 8.877171e-51 | -8.615850e-47 |
| Msa0218240 | Msa0471670 | 0.805215 | 1.486358e-49 | -8.615850e-47 |
| Msa0218240 | Msa0484780 | 0.816665 | 4.918927e-52 | -8.615850e-47 |
| Msa0218240 | Msa0488560 | 0.801411 | 9.120140e-49 | -8.615850e-47 |
| Msa0218240 | Msa0502270 | 0.801353 | 9.372524e-49 | -8.615850e-47 |
| Msa0218240 | Msa0502890 | 0.816462 | 5.462362e-52 | -8.615850e-47 |
| Msa0218240 | Msa0503060 | 0.811836 | 5.737451e-51 | -8.615850e-47 |
| Msa0218240 | Msa0507680 | 0.800069 | 1.712921e-48 | -8.615850e-47 |
| Msa0218240 | Msa0512900 | 0.801934 | 7.123277e-49 | -8.615850e-47 |
| Msa0218240 | Msa0523460 | 0.817129 | 3.870986e-52 | -8.615850e-47 |
| Msa0218240 | Msa0538600 | 0.812332 | 4.472120e-51 | -8.615850e-47 |
| Msa0218240 | Msa0545210 | 0.805001 | 1.647987e-49 | -8.615850e-47 |
| Msa0218240 | Msa0585230 | 0.806598 | 7.611848e-50 | -8.615850e-47 |
| Msa0218240 | Msa0585560 | 0.803823 | 2.900298e-49 | -8.615850e-47 |
| Msa0218240 | Msa0626090 | 0.809422 | 1.907113e-50 | -8.615850e-47 |
| Msa0218240 | Msa0627450 | 0.804285 | 2.324320e-49 | -8.615850e-47 |
| Msa0218240 | Msa0657970 | 0.824827 | 6.535715e-54 | -8.615850e-47 |
| Msa0218240 | Msa0663240 | 0.816437 | 5.532141e-52 | -8.615850e-47 |
| Msa0218240 | Msa0663380 | 0.801824 | 7.502390e-49 | -8.615850e-47 |
| Msa0218240 | Msa0663390 | 0.806999 | 6.260101e-50 | -8.615850e-47 |
| Msa0218240 | Msa0663810 | 0.801606 | 8.315688e-49 | -8.615850e-47 |
| Msa0218240 | Msa0672690 | 0.814270 | 1.678247e-51 | -8.615850e-47 |
| Msa0218240 | Msa0680660 | 0.805370 | 1.379138e-49 | -8.615850e-47 |
| Msa0218240 | Msa0681250 | 0.802768 | 4.796007e-49 | -8.615850e-47 |
| Msa0218240 | Msa0681270 | 0.809696 | 1.665814e-50 | -8.615850e-47 |
| Msa0218240 | Msa0688070 | 0.813920 | 2.004346e-51 | -8.615850e-47 |
| Msa0218240 | Msa0688270 | 0.821747 | 3.425233e-53 | -8.615850e-47 |
| Msa0218240 | Msa0688480 | 0.808879 | 2.493172e-50 | -8.615850e-47 |
| Msa0218240 | Msa0689800 | 0.801503 | 8.733941e-49 | -8.615850e-47 |
| Msa0218240 | Msa0693380 | 0.810402 | 1.173748e-50 | -8.615850e-47 |
| Msa0218240 | Msa0724210 | 0.815750 | 7.879140e-52 | -8.615850e-47 |
| Msa0218240 | Msa0731940 | 0.819181 | 1.328821e-52 | -8.615850e-47 |
| Msa0218240 | Msa0735170 | 0.811413 | 7.088009e-51 | -8.615850e-47 |
| Msa0218240 | Msa0740510 | 0.807573 | 4.732723e-50 | -8.615850e-47 |
| Msa0218240 | Msa0759410 | 0.812016 | 5.240421e-51 | -8.615850e-47 |
| Msa0218240 | Msa0760130 | 0.813417 | 2.587455e-51 | -8.615850e-47 |
| Msa0218240 | Msa0766630 | 0.822148 | 2.766494e-53 | -8.615850e-47 |
| Msa0218240 | Msa0768310 | 0.813674 | 2.270660e-51 | -8.615850e-47 |
| Msa0218240 | Msa0796700 | 0.831871 | 1.305644e-55 | -8.615850e-47 |
| Msa0218240 | Msa0802830 | 0.814232 | 1.710489e-51 | -8.615850e-47 |
| Msa0218240 | Msa0806660 | 0.812518 | 4.071433e-51 | -8.615850e-47 |
| Msa0218240 | Msa0810220 | 0.816349 | 5.789252e-52 | -8.615850e-47 |
| Msa0218240 | Msa0816710 | 0.801496 | 8.762193e-49 | -8.615850e-47 |
| Msa0218240 | Msa0820770 | 0.821729 | 3.458962e-53 | -8.615850e-47 |
| Msa0218240 | Msa0820850 | 0.811683 | 6.193590e-51 | -8.615850e-47 |
| Msa0218240 | Msa0824660 | 0.806851 | 6.727932e-50 | -8.615850e-47 |
| Msa0218240 | Msa0832340 | 0.850701 | 1.432719e-60 | -8.615850e-47 |
| Msa0218240 | Msa0844490 | 0.810030 | 1.411504e-50 | -8.615850e-47 |
| Msa0218240 | Msa0855760 | 0.800815 | 1.207369e-48 | -8.615850e-47 |
| Msa0218240 | Msa0861090 | 0.814660 | 1.375956e-51 | -8.615850e-47 |
| Msa0218240 | Msa0861130 | 0.813059 | 3.099501e-51 | -8.615850e-47 |
| Msa0218240 | Msa0880140 | 0.802000 | 6.904208e-49 | -8.615850e-47 |
| Msa0218240 | Msa0880950 | 0.805551 | 1.264206e-49 | -8.615850e-47 |
| Msa0218240 | Msa0897330 | 0.810892 | 9.195235e-51 | -8.615850e-47 |
| Msa0218240 | Msa0898750 | 0.806172 | 9.360349e-50 | -8.615850e-47 |
| Msa0218240 | Msa0907070 | 0.814311 | 1.643100e-51 | -8.615850e-47 |
| Msa0218240 | Msa0925290 | 0.820190 | 7.820145e-53 | -8.615850e-47 |
| Msa0218240 | Msa0927290 | 0.820670 | 6.068219e-53 | -8.615850e-47 |
| Msa0218240 | Msa0927380 | 0.804936 | 1.700526e-49 | -8.615850e-47 |
| Msa0218240 | Msa0931520 | 0.804857 | 1.766233e-49 | -8.615850e-47 |
| Msa0218240 | Msa0947660 | 0.818001 | 2.460976e-52 | -8.615850e-47 |
| Msa0218240 | Msa0954920 | 0.801380 | 9.252002e-49 | -8.615850e-47 |
| Msa0218240 | Msa0964900 | 0.807894 | 4.044493e-50 | -8.615850e-47 |
| Msa0218240 | Msa0969450 | 0.815912 | 7.247315e-52 | -8.615850e-47 |
| Msa0218240 | Msa0969520 | 0.819699 | 1.012734e-52 | -8.615850e-47 |
| Msa0218240 | Msa0972630 | 0.801514 | 8.687600e-49 | -8.615850e-47 |
| Msa0218240 | Msa0974070 | 0.807645 | 4.568663e-50 | -8.615850e-47 |
| Msa0218240 | Msa0976670 | 0.807370 | 5.225999e-50 | -8.615850e-47 |
| Msa0218240 | Msa0990680 | 0.822072 | 2.879950e-53 | -8.615850e-47 |
| Msa0218240 | Msa0993290 | 0.804696 | 1.908466e-49 | -8.615850e-47 |
| Msa0218240 | Msa1002850 | 0.807231 | 5.593238e-50 | -8.615850e-47 |
| Msa0218240 | Msa1004840 | 0.803686 | 3.097236e-49 | -8.615850e-47 |
| Msa0218240 | Msa1014540 | 0.835742 | 1.405475e-56 | -8.615850e-47 |
| Msa0218240 | Msa1030970 | 0.803207 | 3.891458e-49 | -8.615850e-47 |
| Msa0218240 | Msa1075220 | -0.805103 | 1.568914e-49 | -8.615850e-47 |
| Msa0218240 | Msa1075540 | 0.815509 | 8.914723e-52 | -8.615850e-47 |
| Msa0218240 | Msa1075650 | 0.829558 | 4.813339e-55 | -8.615850e-47 |
| Msa0218240 | Msa1082500 | 0.844011 | 9.846644e-59 | -8.615850e-47 |
| Msa0218240 | Msa1085200 | 0.805822 | 1.109013e-49 | -8.615850e-47 |
| Msa0218240 | Msa1104090 | 0.815225 | 1.030821e-51 | -8.615850e-47 |
| Msa0218240 | Msa1113170 | 0.810620 | 1.053149e-50 | -8.615850e-47 |
| Msa0218240 | Msa1121490 | 0.832559 | 8.824508e-56 | -8.615850e-47 |
| Msa0218240 | Msa1131220 | 0.805524 | 1.280550e-49 | -8.615850e-47 |
| Msa0218240 | Msa1132970 | 0.808656 | 2.781741e-50 | -8.615850e-47 |
| Msa0218240 | Msa1144720 | -0.821248 | 4.465446e-53 | -8.615850e-47 |
| Msa0218240 | Msa1162550 | -0.802548 | 5.324066e-49 | -8.615850e-47 |
| Msa0218240 | Msa1173100 | 0.805164 | 1.523692e-49 | -8.615850e-47 |
| Msa0218240 | Msa1199830 | -0.802030 | 6.806848e-49 | -8.615850e-47 |
| Msa0218240 | Msa1204530 | 0.811739 | 6.022792e-51 | -8.615850e-47 |
| Msa0218240 | Msa1224480 | 0.813301 | 2.742771e-51 | -8.615850e-47 |
| Msa0218240 | Msa1233890 | 0.810366 | 1.194757e-50 | -8.615850e-47 |
| Msa0218240 | Msa1253000 | 0.830689 | 2.549651e-55 | -8.615850e-47 |
| Msa0218240 | Msa1283860 | 0.803235 | 3.840674e-49 | -8.615850e-47 |
| Msa0218240 | Msa1284680 | 0.827901 | 1.210815e-54 | -8.615850e-47 |
| Msa0218240 | Msa1291660 | 0.830492 | 2.848036e-55 | -8.615850e-47 |
| Msa0218240 | Msa1296760 | 0.813011 | 3.176489e-51 | -8.615850e-47 |
| Msa0218240 | Msa1305340 | 0.801316 | 9.536244e-49 | -8.615850e-47 |
| Msa0218240 | Msa1306850 | 0.802918 | 4.466196e-49 | -8.615850e-47 |
| Msa0218240 | Msa1322890 | 0.812593 | 3.920910e-51 | -8.615850e-47 |
| Msa0218240 | Msa1324500 | 0.806725 | 7.155511e-50 | -8.615850e-47 |
| Msa0218240 | Msa1325860 | -0.833556 | 4.982423e-56 | -8.615850e-47 |
| Msa0218240 | Msa1331000 | 0.829444 | 5.130044e-55 | -8.615850e-47 |
| Msa0218240 | Msa1353470 | 0.816813 | 4.556858e-52 | -8.615850e-47 |
| Msa0218240 | Msa1359040 | 0.807104 | 5.948544e-50 | -8.615850e-47 |
| Msa0218240 | Msa1362670 | 0.811004 | 8.697030e-51 | -8.615850e-47 |
| Msa0218240 | Msa1372760 | 0.808489 | 3.020569e-50 | -8.615850e-47 |
| Msa0218240 | Msa1372980 | 0.829779 | 4.252625e-55 | -8.615850e-47 |
| Msa0218240 | Msa1373010 | 0.823205 | 1.570063e-53 | -8.615850e-47 |
| Msa0218240 | Msa1373030 | 0.888301 | 6.666764e-73 | -8.615850e-47 |
| Msa0218240 | Msa1397860 | 0.826036 | 3.381906e-54 | -8.615850e-47 |
| Msa0218240 | Msa1403480 | 0.803090 | 4.114821e-49 | -8.615850e-47 |
| Msa0218240 | Msa1409700 | 0.800923 | 1.147743e-48 | -8.615850e-47 |
| Msa0218240 | Msa1409880 | 0.803898 | 2.798219e-49 | -8.615850e-47 |
| Msa0218240 | Msa1411020 | 0.808448 | 3.081393e-50 | -8.615850e-47 |
| Msa0218240 | Msa1420290 | 0.811877 | 5.618236e-51 | -8.615850e-47 |
| Msa0218240 | Msa1423390 | 0.802211 | 6.248817e-49 | -8.615850e-47 |
| Msa0218240 | Msa1424290 | 0.809989 | 1.440635e-50 | -8.615850e-47 |
| Msa0218240 | Msa1425830 | 0.802220 | 6.221452e-49 | -8.615850e-47 |
| Msa0218240 | Msa1434350 | 0.808855 | 2.522270e-50 | -8.615850e-47 |
| Msa0218240 | Msa1436480 | 0.802971 | 4.354873e-49 | -8.615850e-47 |
| Msa0218240 | Msa1437180 | 0.813593 | 2.366694e-51 | -8.615850e-47 |
| Msa0218240 | Msa1439320 | 0.806081 | 9.782388e-50 | -8.615850e-47 |
| Msa0218240 | Msa1440370 | 0.800679 | 1.286880e-48 | -8.615850e-47 |
| Msa0218240 | Msa1440810 | 0.802425 | 5.644176e-49 | -8.615850e-47 |
| Msa0218240 | Msa1449340 | -0.800952 | 1.132302e-48 | -8.615850e-47 |
| Msa0218240 | Msa1452240 | 0.810223 | 1.282386e-50 | -8.615850e-47 |
| Msa0218240 | Msa1460050 | 0.829468 | 5.062873e-55 | -8.615850e-47 |
| Msa0218240 | Msa1460830 | 0.803083 | 4.127975e-49 | -8.615850e-47 |
| Msa0218240 | Msa1466540 | 0.828855 | 7.128273e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218240 | MtrunA17_Chr2g0320431 | 78.731 | 268 | 18 | 5 | 1 | 253 | 15 | 258 | 5.93e-141 | 396 |
| Msa0218240 | MtrunA17_Chr2g0320451 | 86.747 | 166 | 9 | 1 | 3 | 168 | 220 | 372 | 3.81e-92 | 292 |
| Msa0218240 | MtrunA17_Chr2g0314231 | 76.761 | 142 | 32 | 1 | 3 | 144 | 4 | 144 | 4.08e-74 | 222 |
| Msa0218240 | MtrunA17_Chr2g0314241 | 60.839 | 143 | 14 | 1 | 3 | 145 | 54 | 154 | 1.65e-51 | 165 |
| Msa0218240 | MtrunA17_Chr2g0320401 | 93.750 | 64 | 4 | 0 | 1 | 64 | 45 | 108 | 1.46e-36 | 125 |
| Msa0218240 | MtrunA17_Chr3g0079841 | 78.571 | 56 | 12 | 0 | 198 | 253 | 156 | 211 | 1.20e-21 | 90.9 |
| Msa0218240 | MtrunA17_Chr7g0265211 | 34.722 | 144 | 77 | 2 | 7 | 150 | 246 | 372 | 8.01e-19 | 85.5 |
| Msa0218240 | MtrunA17_Chr1g0179841 | 30.519 | 154 | 92 | 2 | 11 | 164 | 97 | 235 | 3.77e-16 | 77.8 |
| Msa0218240 | MtrunA17_Chr7g0222931 | 35.714 | 126 | 63 | 2 | 5 | 130 | 400 | 507 | 4.52e-16 | 77.4 |
| Msa0218240 | MtrunA17_Chr1g0182221 | 33.333 | 129 | 68 | 2 | 2 | 130 | 394 | 504 | 5.46e-16 | 77.0 |
| Msa0218240 | MtrunA17_Chr1g0182481 | 31.250 | 144 | 79 | 3 | 9 | 152 | 254 | 377 | 5.03e-14 | 71.6 |
| Msa0218240 | MtrunA17_Chr4g0030901 | 30.328 | 122 | 66 | 2 | 9 | 130 | 318 | 420 | 2.71e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218240 | AT2G27980.1 | 47.059 | 170 | 76 | 2 | 7 | 176 | 375 | 530 | 1.14e-41 | 152 |
| Msa0218240 | AT2G36720.1 | 29.744 | 195 | 116 | 3 | 10 | 199 | 261 | 439 | 1.04e-18 | 85.9 |
| Msa0218240 | AT2G36720.2 | 29.744 | 195 | 116 | 3 | 10 | 199 | 261 | 439 | 1.04e-18 | 85.9 |
| Msa0218240 | AT5G13660.1 | 34.783 | 138 | 71 | 3 | 2 | 138 | 391 | 510 | 1.30e-16 | 79.3 |
| Msa0218240 | AT5G13660.2 | 34.058 | 138 | 73 | 3 | 2 | 138 | 391 | 511 | 3.16e-16 | 78.2 |
| Msa0218240 | AT5G59830.3 | 32.787 | 122 | 63 | 2 | 9 | 130 | 290 | 392 | 8.51e-15 | 73.6 |
| Msa0218240 | AT5G59830.1 | 32.787 | 122 | 63 | 2 | 9 | 130 | 290 | 392 | 8.51e-15 | 73.6 |
| Msa0218240 | AT5G59830.2 | 32.787 | 122 | 63 | 2 | 9 | 130 | 290 | 392 | 8.51e-15 | 73.6 |
| Msa0218240 | AT3G53680.1 | 34.426 | 122 | 62 | 2 | 9 | 130 | 182 | 285 | 6.96e-14 | 71.6 |
| Msa0218240 | AT3G53680.2 | 34.426 | 122 | 62 | 2 | 9 | 130 | 182 | 285 | 7.03e-14 | 71.2 |
| Msa0218240 | AT2G37520.1 | 30.328 | 122 | 67 | 2 | 9 | 130 | 172 | 275 | 2.55e-12 | 66.6 |
Find 66 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTGCAACTGGGATTC+TGG | 0.215141 | 2_1:-65379834 | Msa0218240:CDS |
| TAATCCGGAGGACGTTTATT+AGG | 0.284155 | 2_1:+65379421 | None:intergenic |
| CAAGGTGTGATCAAAGATTC+AGG | 0.313892 | 2_1:-65379625 | Msa0218240:CDS |
| CTGAAGGATCTTCTTGCAAC+TGG | 0.333826 | 2_1:-65379842 | Msa0218240:CDS |
| TGATGTGTAGGCGCGTAAAC+CGG | 0.346747 | 2_1:-65379662 | Msa0218240:intron |
| AGAGGATGCGCTCTTGGTTT+CGG | 0.354013 | 2_1:-65379064 | Msa0218240:CDS |
| TGGGAGTTGTAAGGGGAATC+AGG | 0.356202 | 2_1:-65379587 | Msa0218240:CDS |
| CAAACAATGAAGGGAGGTTC+TGG | 0.363982 | 2_1:-65379884 | None:intergenic |
| AGTGTCTGTGCTGGACTAAT+TGG | 0.366436 | 2_1:+65378136 | None:intergenic |
| AGGGGAATCAGGCAAGTAAA+TGG | 0.390137 | 2_1:-65379576 | Msa0218240:CDS |
| TGAAATCACCCAGGACCATT+TGG | 0.397269 | 2_1:+65379314 | None:intergenic |
| TGAGAATGGAAAACTCCTTC+GGG | 0.415866 | 2_1:-65379389 | Msa0218240:CDS |
| GATTATACTTACCTTGAGAA+TGG | 0.429569 | 2_1:-65379403 | Msa0218240:CDS |
| TGAAGGGAGGTTCTGGTAAG+AGG | 0.433057 | 2_1:-65379877 | Msa0218240:CDS |
| AGAAGATCCTTCAGCTTGAC+AGG | 0.436708 | 2_1:+65379851 | None:intergenic |
| AAAAGAAGAGGATGCGCTCT+TGG | 0.439362 | 2_1:-65379070 | Msa0218240:CDS |
| ACTTCTTCCAAGAAAATAAG+AGG | 0.454192 | 2_1:-65378989 | Msa0218240:intron |
| TTGAGAATGGAAAACTCCTT+CGG | 0.454228 | 2_1:-65379390 | Msa0218240:CDS |
| GGCGCGTAAACCGGGAGAAA+AGG | 0.458730 | 2_1:-65379653 | Msa0218240:CDS |
| GATGTGTAGGCGCGTAAACC+GGG | 0.460301 | 2_1:-65379661 | Msa0218240:intron |
| ATCCAACGGAAGACTTGAAC+AGG | 0.468127 | 2_1:+65379354 | None:intergenic |
| GTCTCTTTCAACTCCATGCA+TGG | 0.468548 | 2_1:+65379115 | None:intergenic |
| ATATATAGTCACGGTGGACC+TGG | 0.469482 | 2_1:-65378068 | Msa0218240:CDS |
| TAAAGAGGTCCAAATGGTCC+TGG | 0.476200 | 2_1:-65379323 | Msa0218240:CDS |
| GACACTCGGTTCTTCAGTGC+AGG | 0.478723 | 2_1:-65378119 | Msa0218240:CDS |
| CTTGCAACTGGGATTCTGGA+GGG | 0.487680 | 2_1:-65379830 | Msa0218240:CDS |
| GTTGGATACATTGGATAAAG+AGG | 0.497086 | 2_1:-65379338 | Msa0218240:CDS |
| TCAGTGCAGGGAACAATTGA+CGG | 0.501035 | 2_1:-65378106 | Msa0218240:CDS |
| AAGTCTTCCGTTGGATACAT+TGG | 0.504489 | 2_1:-65379347 | Msa0218240:CDS |
| TTCTCAAGGTAAGTATAATC+CGG | 0.505601 | 2_1:+65379406 | None:intergenic |
| ATTGGATAAAGAGGTCCAAA+TGG | 0.516952 | 2_1:-65379329 | Msa0218240:CDS |
| TAGTCCTAATAAACGTCCTC+CGG | 0.530968 | 2_1:-65379425 | Msa0218240:CDS |
| TGCCTGTTCAAGTCTTCCGT+TGG | 0.532331 | 2_1:-65379356 | Msa0218240:CDS |
| TGAAGGATCTTCTTGCAACT+GGG | 0.557026 | 2_1:-65379841 | Msa0218240:CDS |
| AATATCTGTTTCAACTGCAG+AGG | 0.560462 | 2_1:-65379277 | Msa0218240:intron |
| CCGGGAGAAAAGGATTTACA+AGG | 0.568192 | 2_1:-65379643 | Msa0218240:CDS |
| ATTGAAAGTGAGATATGTCA+AGG | 0.573844 | 2_1:-65379807 | Msa0218240:CDS |
| GAAGAACCGAGTGTCTGTGC+TGG | 0.576107 | 2_1:+65378127 | None:intergenic |
| TCTTGTGACCAAACAATGAA+GGG | 0.576525 | 2_1:-65379893 | None:intergenic |
| GTCAATTACTGAATCTAACA+AGG | 0.580889 | 2_1:-65379161 | Msa0218240:CDS |
| GAGTTGAAAGAGACTTCTGC+AGG | 0.582564 | 2_1:-65379106 | Msa0218240:CDS |
| CTGGGTTCTGAACAGCTGAA+AGG | 0.586271 | 2_1:-65378049 | Msa0218240:CDS |
| CAGTGCAGGGAACAATTGAC+GGG | 0.587044 | 2_1:-65378105 | Msa0218240:CDS |
| TATATAGTCACGGTGGACCT+GGG | 0.588733 | 2_1:-65378067 | Msa0218240:CDS |
| CAGGCAAGTAAATGGAGGGA+TGG | 0.589865 | 2_1:-65379568 | Msa0218240:CDS |
| GAGATATGTCAAGGGACAGA+AGG | 0.592127 | 2_1:-65379798 | Msa0218240:intron |
| ACTAGTATGCAATCCATGCA+TGG | 0.592882 | 2_1:-65379128 | Msa0218240:CDS |
| ACTTCTTCCAAGAAAAGAAG+AGG | 0.593684 | 2_1:-65379082 | Msa0218240:CDS |
| TCTTGCAACTGGGATTCTGG+AGG | 0.593767 | 2_1:-65379831 | Msa0218240:CDS |
| GGAATCAGGCAAGTAAATGG+AGG | 0.597083 | 2_1:-65379573 | Msa0218240:CDS |
| AAAGAGGTCCAAATGGTCCT+GGG | 0.599169 | 2_1:-65379322 | Msa0218240:CDS |
| GAGGTTTCCTGTCAAGCTGA+AGG | 0.603772 | 2_1:-65379858 | Msa0218240:CDS |
| CTTTCAGCTGTTCAGAACCC+AGG | 0.626176 | 2_1:+65378050 | None:intergenic |
| ATTGACGGGAAATTTGATGA+CGG | 0.626327 | 2_1:-65378091 | Msa0218240:CDS |
| ATTAGTCCAGCACAGACACT+CGG | 0.635032 | 2_1:-65378133 | Msa0218240:CDS |
| GAATCAGGCAAGTAAATGGA+GGG | 0.637456 | 2_1:-65379572 | Msa0218240:CDS |
| TCTTTATCCAATGTATCCAA+CGG | 0.644524 | 2_1:+65379340 | None:intergenic |
| ACACTCGGTTCTTCAGTGCA+GGG | 0.665318 | 2_1:-65378118 | Msa0218240:CDS |
| TTGAAAGTGAGATATGTCAA+GGG | 0.671458 | 2_1:-65379806 | Msa0218240:CDS |
| TCAATTACTGAATCTAACAA+GGG | 0.676694 | 2_1:-65379160 | Msa0218240:CDS |
| TGATGACGGATATATAGTCA+CGG | 0.676944 | 2_1:-65378077 | Msa0218240:CDS |
| TGTGACCAAACAATGAAGGG+AGG | 0.679689 | 2_1:-65379890 | None:intergenic |
| AGGCATTCATGACATCCCGA+AGG | 0.693693 | 2_1:+65379374 | None:intergenic |
| TCAAGGTAAGTATAATCCGG+AGG | 0.695456 | 2_1:+65379409 | None:intergenic |
| TCTGCATTGTGAAATCACCC+AGG | 0.713370 | 2_1:+65379305 | None:intergenic |
| TGACGGATATATAGTCACGG+TGG | 0.799576 | 2_1:-65378074 | Msa0218240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATATTGTTTTGAACTTTT+CGG | - | chr2_1:65378132-65378151 | Msa0218240:CDS | 20.0% |
| !!! | TGATTTTTTTGTTTTGAAAC+TGG | - | chr2_1:65379197-65379216 | Msa0218240:intron | 20.0% |
| !!! | GTATATTGTTTTGAACTTTT+CGG | - | chr2_1:65378132-65378151 | Msa0218240:CDS | 20.0% |
| !!! | TGATTTTTTTGTTTTGAAAC+TGG | - | chr2_1:65379197-65379216 | Msa0218240:intron | 20.0% |
| !!! | GAGTTTTTTTTTCTTTCTTC+TGG | - | chr2_1:65378192-65378211 | Msa0218240:intron | 25.0% |
| !!! | TTATTGTTTTTTTGCTTGTG+TGG | - | chr2_1:65378363-65378382 | Msa0218240:intron | 25.0% |
| !!! | TATTGTTTTTTTGCTTGTGT+GGG | - | chr2_1:65378364-65378383 | Msa0218240:intron | 25.0% |
| !!! | AATTTTGATGAACTGTTTGT+AGG | - | chr2_1:65378724-65378743 | Msa0218240:intron | 25.0% |
| !!! | ATTTTGATGAACTGTTTGTA+GGG | - | chr2_1:65378725-65378744 | Msa0218240:intron | 25.0% |
| ! | TCAATTACTGAATCTAACAA+GGG | - | chr2_1:65378748-65378767 | Msa0218240:intron | 25.0% |
| ! | TCAAAAAATAAGAGAGAAGA+AGG | - | chr2_1:65378868-65378887 | Msa0218240:intron | 25.0% |
| !!! | TGTAATACCTCTTATTTTCT+TGG | + | chr2_1:65378929-65378948 | None:intergenic | 25.0% |
| ! | TTGTATGTTTACAAGTTTCT+AGG | + | chr2_1:65378955-65378974 | None:intergenic | 25.0% |
| !! | TGAAATATTTTTCTGTGATG+TGG | - | chr2_1:65379092-65379111 | Msa0218240:CDS | 25.0% |
| !! | TCGTTTCTTTAATTTAGACT+TGG | - | chr2_1:65379253-65379272 | Msa0218240:intron | 25.0% |
| ! | ATTATGACATCGTTTAATCT+GGG | - | chr2_1:65379350-65379369 | Msa0218240:CDS | 25.0% |
| ! | AACAAAGTTCTTATCTATGT+TGG | - | chr2_1:65379689-65379708 | Msa0218240:intron | 25.0% |
| !!! | GAGTTTTTTTTTCTTTCTTC+TGG | - | chr2_1:65378192-65378211 | Msa0218240:intron | 25.0% |
| !!! | TTATTGTTTTTTTGCTTGTG+TGG | - | chr2_1:65378363-65378382 | Msa0218240:intron | 25.0% |
| !!! | TATTGTTTTTTTGCTTGTGT+GGG | - | chr2_1:65378364-65378383 | Msa0218240:intron | 25.0% |
| !!! | AATTTTGATGAACTGTTTGT+AGG | - | chr2_1:65378724-65378743 | Msa0218240:intron | 25.0% |
| !!! | ATTTTGATGAACTGTTTGTA+GGG | - | chr2_1:65378725-65378744 | Msa0218240:intron | 25.0% |
| ! | TCAATTACTGAATCTAACAA+GGG | - | chr2_1:65378748-65378767 | Msa0218240:intron | 25.0% |
| ! | TCAAAAAATAAGAGAGAAGA+AGG | - | chr2_1:65378868-65378887 | Msa0218240:intron | 25.0% |
| !!! | TGTAATACCTCTTATTTTCT+TGG | + | chr2_1:65378929-65378948 | None:intergenic | 25.0% |
| ! | TTGTATGTTTACAAGTTTCT+AGG | + | chr2_1:65378955-65378974 | None:intergenic | 25.0% |
| !! | TGAAATATTTTTCTGTGATG+TGG | - | chr2_1:65379092-65379111 | Msa0218240:CDS | 25.0% |
| !! | TCGTTTCTTTAATTTAGACT+TGG | - | chr2_1:65379253-65379272 | Msa0218240:intron | 25.0% |
| ! | ATTATGACATCGTTTAATCT+GGG | - | chr2_1:65379350-65379369 | Msa0218240:CDS | 25.0% |
| ! | AACAAAGTTCTTATCTATGT+TGG | - | chr2_1:65379689-65379708 | Msa0218240:intron | 25.0% |
| ATTGAAAGTGAGATATGTCA+AGG | - | chr2_1:65378101-65378120 | Msa0218240:CDS | 30.0% | |
| TTGAAAGTGAGATATGTCAA+GGG | - | chr2_1:65378102-65378121 | Msa0218240:CDS | 30.0% | |
| !! | GTTTTGAACTTTTCGGATTT+TGG | - | chr2_1:65378139-65378158 | Msa0218240:CDS | 30.0% |
| GTGAAATTGTGAATGATGTT+AGG | - | chr2_1:65378170-65378189 | Msa0218240:intron | 30.0% | |
| TTTATTCGTGAATGATGTGT+AGG | - | chr2_1:65378234-65378253 | Msa0218240:intron | 30.0% | |
| !!! | TGTTGTTTTTTGTTGAGAGT+AGG | - | chr2_1:65378426-65378445 | Msa0218240:intron | 30.0% |
| TTCTCAAGGTAAGTATAATC+CGG | + | chr2_1:65378505-65378524 | None:intergenic | 30.0% | |
| GATTATACTTACCTTGAGAA+TGG | - | chr2_1:65378505-65378524 | Msa0218240:intron | 30.0% | |
| TCTTTATCCAATGTATCCAA+CGG | + | chr2_1:65378571-65378590 | None:intergenic | 30.0% | |
| GTCAATTACTGAATCTAACA+AGG | - | chr2_1:65378747-65378766 | Msa0218240:intron | 30.0% | |
| !!! | TTCTGCAGAAGTAGTTTTTT+CGG | + | chr2_1:65378899-65378918 | None:intergenic | 30.0% |
| ACTTCTTCCAAGAAAATAAG+AGG | - | chr2_1:65378919-65378938 | Msa0218240:intron | 30.0% | |
| GGACGTATAGTCAATATTAT+TGG | + | chr2_1:65378998-65379017 | None:intergenic | 30.0% | |
| !!! | GAGTTTTGATTGACTTCTTT+TGG | - | chr2_1:65379134-65379153 | Msa0218240:CDS | 30.0% |
| AGAAACGAATCATCTATGAA+TGG | + | chr2_1:65379241-65379260 | None:intergenic | 30.0% | |
| CATTATGACATCGTTTAATC+TGG | - | chr2_1:65379349-65379368 | Msa0218240:CDS | 30.0% | |
| ATTGAAAGTGAGATATGTCA+AGG | - | chr2_1:65378101-65378120 | Msa0218240:CDS | 30.0% | |
| TTGAAAGTGAGATATGTCAA+GGG | - | chr2_1:65378102-65378121 | Msa0218240:CDS | 30.0% | |
| !! | GTTTTGAACTTTTCGGATTT+TGG | - | chr2_1:65378139-65378158 | Msa0218240:CDS | 30.0% |
| GTGAAATTGTGAATGATGTT+AGG | - | chr2_1:65378170-65378189 | Msa0218240:intron | 30.0% | |
| TTTATTCGTGAATGATGTGT+AGG | - | chr2_1:65378234-65378253 | Msa0218240:intron | 30.0% | |
| !!! | TGTTGTTTTTTGTTGAGAGT+AGG | - | chr2_1:65378426-65378445 | Msa0218240:intron | 30.0% |
| TTCTCAAGGTAAGTATAATC+CGG | + | chr2_1:65378505-65378524 | None:intergenic | 30.0% | |
| GATTATACTTACCTTGAGAA+TGG | - | chr2_1:65378505-65378524 | Msa0218240:intron | 30.0% | |
| TCTTTATCCAATGTATCCAA+CGG | + | chr2_1:65378571-65378590 | None:intergenic | 30.0% | |
| GTCAATTACTGAATCTAACA+AGG | - | chr2_1:65378747-65378766 | Msa0218240:intron | 30.0% | |
| !!! | TTCTGCAGAAGTAGTTTTTT+CGG | + | chr2_1:65378899-65378918 | None:intergenic | 30.0% |
| ACTTCTTCCAAGAAAATAAG+AGG | - | chr2_1:65378919-65378938 | Msa0218240:intron | 30.0% | |
| GGACGTATAGTCAATATTAT+TGG | + | chr2_1:65378998-65379017 | None:intergenic | 30.0% | |
| !!! | GAGTTTTGATTGACTTCTTT+TGG | - | chr2_1:65379134-65379153 | Msa0218240:CDS | 30.0% |
| AGAAACGAATCATCTATGAA+TGG | + | chr2_1:65379241-65379260 | None:intergenic | 30.0% | |
| CATTATGACATCGTTTAATC+TGG | - | chr2_1:65379349-65379368 | Msa0218240:CDS | 30.0% | |
| !!! | GAACTTTTCGGATTTTGGTT+TGG | - | chr2_1:65378144-65378163 | Msa0218240:CDS | 35.0% |
| ! | TCAGGAATTTTGTGCTTTTG+TGG | - | chr2_1:65378301-65378320 | Msa0218240:intron | 35.0% |
| ! | CAGGAATTTTGTGCTTTTGT+GGG | - | chr2_1:65378302-65378321 | Msa0218240:intron | 35.0% |
| GCATGCAACTCAAAAACATT+CGG | + | chr2_1:65378460-65378479 | None:intergenic | 35.0% | |
| !!! | AATGTTTTTGAGTTGCATGC+TGG | - | chr2_1:65378460-65378479 | Msa0218240:intron | 35.0% |
| TTGAGAATGGAAAACTCCTT+CGG | - | chr2_1:65378518-65378537 | Msa0218240:intron | 35.0% | |
| GTTGGATACATTGGATAAAG+AGG | - | chr2_1:65378570-65378589 | Msa0218240:intron | 35.0% | |
| ATTGGATAAAGAGGTCCAAA+TGG | - | chr2_1:65378579-65378598 | Msa0218240:intron | 35.0% | |
| AATATCTGTTTCAACTGCAG+AGG | - | chr2_1:65378631-65378650 | Msa0218240:intron | 35.0% | |
| AATTACATAGTGTCACAGCT+AGG | + | chr2_1:65378680-65378699 | None:intergenic | 35.0% | |
| ACTTCTTCCAAGAAAAGAAG+AGG | - | chr2_1:65378826-65378845 | Msa0218240:intron | 35.0% | |
| TATACGTCCATCATGAGTTA+GGG | - | chr2_1:65379009-65379028 | Msa0218240:CDS | 35.0% | |
| ATGTATACCCTAACTCATGA+TGG | + | chr2_1:65379019-65379038 | None:intergenic | 35.0% | |
| GTGATGTGGAAATAGAAGTA+AGG | - | chr2_1:65379106-65379125 | Msa0218240:CDS | 35.0% | |
| TCTATCATAAGTTGTGTCGA+TGG | + | chr2_1:65379328-65379347 | None:intergenic | 35.0% | |
| !! | ATCGAAAGCTTTATTGCACT+AGG | + | chr2_1:65379388-65379407 | None:intergenic | 35.0% |
| ATTTACTGCCATAAGCACAT+AGG | - | chr2_1:65379424-65379443 | Msa0218240:CDS | 35.0% | |
| AAACTCTCCTAGAGAACTAA+TGG | - | chr2_1:65379521-65379540 | Msa0218240:intron | 35.0% | |
| ATTGACGGGAAATTTGATGA+CGG | - | chr2_1:65379817-65379836 | Msa0218240:CDS | 35.0% | |
| !! | TGATGACGGATATATAGTCA+CGG | - | chr2_1:65379831-65379850 | Msa0218240:CDS | 35.0% |
| !!! | GAACTTTTCGGATTTTGGTT+TGG | - | chr2_1:65378144-65378163 | Msa0218240:CDS | 35.0% |
| ! | TCAGGAATTTTGTGCTTTTG+TGG | - | chr2_1:65378301-65378320 | Msa0218240:intron | 35.0% |
| ! | CAGGAATTTTGTGCTTTTGT+GGG | - | chr2_1:65378302-65378321 | Msa0218240:intron | 35.0% |
| GCATGCAACTCAAAAACATT+CGG | + | chr2_1:65378460-65378479 | None:intergenic | 35.0% | |
| !!! | AATGTTTTTGAGTTGCATGC+TGG | - | chr2_1:65378460-65378479 | Msa0218240:intron | 35.0% |
| TTGAGAATGGAAAACTCCTT+CGG | - | chr2_1:65378518-65378537 | Msa0218240:intron | 35.0% | |
| GTTGGATACATTGGATAAAG+AGG | - | chr2_1:65378570-65378589 | Msa0218240:intron | 35.0% | |
| ATTGGATAAAGAGGTCCAAA+TGG | - | chr2_1:65378579-65378598 | Msa0218240:intron | 35.0% | |
| AATATCTGTTTCAACTGCAG+AGG | - | chr2_1:65378631-65378650 | Msa0218240:intron | 35.0% | |
| AATTACATAGTGTCACAGCT+AGG | + | chr2_1:65378680-65378699 | None:intergenic | 35.0% | |
| ACTTCTTCCAAGAAAAGAAG+AGG | - | chr2_1:65378826-65378845 | Msa0218240:intron | 35.0% | |
| TATACGTCCATCATGAGTTA+GGG | - | chr2_1:65379009-65379028 | Msa0218240:CDS | 35.0% | |
| ATGTATACCCTAACTCATGA+TGG | + | chr2_1:65379019-65379038 | None:intergenic | 35.0% | |
| GTGATGTGGAAATAGAAGTA+AGG | - | chr2_1:65379106-65379125 | Msa0218240:CDS | 35.0% | |
| TCTATCATAAGTTGTGTCGA+TGG | + | chr2_1:65379328-65379347 | None:intergenic | 35.0% | |
| !! | ATCGAAAGCTTTATTGCACT+AGG | + | chr2_1:65379388-65379407 | None:intergenic | 35.0% |
| ATTTACTGCCATAAGCACAT+AGG | - | chr2_1:65379424-65379443 | Msa0218240:CDS | 35.0% | |
| AAACTCTCCTAGAGAACTAA+TGG | - | chr2_1:65379521-65379540 | Msa0218240:intron | 35.0% | |
| ATTGACGGGAAATTTGATGA+CGG | - | chr2_1:65379817-65379836 | Msa0218240:CDS | 35.0% | |
| !! | TGATGACGGATATATAGTCA+CGG | - | chr2_1:65379831-65379850 | Msa0218240:CDS | 35.0% |
| TGAAGGATCTTCTTGCAACT+GGG | - | chr2_1:65378067-65378086 | Msa0218240:CDS | 40.0% | |
| ! | CCTTGTAAATCCTTTTCTCC+CGG | + | chr2_1:65378268-65378287 | None:intergenic | 40.0% |
| CAAGGTGTGATCAAAGATTC+AGG | - | chr2_1:65378283-65378302 | Msa0218240:intron | 40.0% | |
| ! | TGCTTTTGTGGGAGTTGTAA+GGG | - | chr2_1:65378313-65378332 | Msa0218240:intron | 40.0% |
| GAATCAGGCAAGTAAATGGA+GGG | - | chr2_1:65378336-65378355 | Msa0218240:intron | 40.0% | |
| TAGTCCTAATAAACGTCCTC+CGG | - | chr2_1:65378483-65378502 | Msa0218240:intron | 40.0% | |
| TAATCCGGAGGACGTTTATT+AGG | + | chr2_1:65378490-65378509 | None:intergenic | 40.0% | |
| TCAAGGTAAGTATAATCCGG+AGG | + | chr2_1:65378502-65378521 | None:intergenic | 40.0% | |
| ! | GAAGGAGTTTTCCATTCTCA+AGG | + | chr2_1:65378519-65378538 | None:intergenic | 40.0% |
| TGAGAATGGAAAACTCCTTC+GGG | - | chr2_1:65378519-65378538 | Msa0218240:intron | 40.0% | |
| AAGTCTTCCGTTGGATACAT+TGG | - | chr2_1:65378561-65378580 | Msa0218240:intron | 40.0% | |
| ACTAGTATGCAATCCATGCA+TGG | - | chr2_1:65378780-65378799 | Msa0218240:intron | 40.0% | |
| !!! | GCAGAAGTAGTTTTTTCGGA+AGG | + | chr2_1:65378895-65378914 | None:intergenic | 40.0% |
| CTATACGTCCATCATGAGTT+AGG | - | chr2_1:65379008-65379027 | Msa0218240:CDS | 40.0% | |
| AACAGTCACCTATGTGCTTA+TGG | + | chr2_1:65379435-65379454 | None:intergenic | 40.0% | |
| TAAGCACATAGGTGACTGTT+TGG | - | chr2_1:65379435-65379454 | Msa0218240:CDS | 40.0% | |
| AAGCACATAGGTGACTGTTT+GGG | - | chr2_1:65379436-65379455 | Msa0218240:CDS | 40.0% | |
| TTGGGAGAGCTTATGGATAT+TGG | - | chr2_1:65379454-65379473 | Msa0218240:CDS | 40.0% | |
| ! | GCTGTTTCCATTAGTTCTCT+AGG | + | chr2_1:65379531-65379550 | None:intergenic | 40.0% |
| TGAAGGATCTTCTTGCAACT+GGG | - | chr2_1:65378067-65378086 | Msa0218240:CDS | 40.0% | |
| ! | CCTTGTAAATCCTTTTCTCC+CGG | + | chr2_1:65378268-65378287 | None:intergenic | 40.0% |
| CAAGGTGTGATCAAAGATTC+AGG | - | chr2_1:65378283-65378302 | Msa0218240:intron | 40.0% | |
| ! | TGCTTTTGTGGGAGTTGTAA+GGG | - | chr2_1:65378313-65378332 | Msa0218240:intron | 40.0% |
| GAATCAGGCAAGTAAATGGA+GGG | - | chr2_1:65378336-65378355 | Msa0218240:intron | 40.0% | |
| TAGTCCTAATAAACGTCCTC+CGG | - | chr2_1:65378483-65378502 | Msa0218240:intron | 40.0% | |
| TAATCCGGAGGACGTTTATT+AGG | + | chr2_1:65378490-65378509 | None:intergenic | 40.0% | |
| TCAAGGTAAGTATAATCCGG+AGG | + | chr2_1:65378502-65378521 | None:intergenic | 40.0% | |
| ! | GAAGGAGTTTTCCATTCTCA+AGG | + | chr2_1:65378519-65378538 | None:intergenic | 40.0% |
| TGAGAATGGAAAACTCCTTC+GGG | - | chr2_1:65378519-65378538 | Msa0218240:intron | 40.0% | |
| AAGTCTTCCGTTGGATACAT+TGG | - | chr2_1:65378561-65378580 | Msa0218240:intron | 40.0% | |
| ACTAGTATGCAATCCATGCA+TGG | - | chr2_1:65378780-65378799 | Msa0218240:intron | 40.0% | |
| !!! | GCAGAAGTAGTTTTTTCGGA+AGG | + | chr2_1:65378895-65378914 | None:intergenic | 40.0% |
| CTATACGTCCATCATGAGTT+AGG | - | chr2_1:65379008-65379027 | Msa0218240:CDS | 40.0% | |
| AACAGTCACCTATGTGCTTA+TGG | + | chr2_1:65379435-65379454 | None:intergenic | 40.0% | |
| TAAGCACATAGGTGACTGTT+TGG | - | chr2_1:65379435-65379454 | Msa0218240:CDS | 40.0% | |
| AAGCACATAGGTGACTGTTT+GGG | - | chr2_1:65379436-65379455 | Msa0218240:CDS | 40.0% | |
| TTGGGAGAGCTTATGGATAT+TGG | - | chr2_1:65379454-65379473 | Msa0218240:CDS | 40.0% | |
| ! | GCTGTTTCCATTAGTTCTCT+AGG | + | chr2_1:65379531-65379550 | None:intergenic | 40.0% |
| AGAAGATCCTTCAGCTTGAC+AGG | + | chr2_1:65378060-65378079 | None:intergenic | 45.0% | |
| CTGAAGGATCTTCTTGCAAC+TGG | - | chr2_1:65378066-65378085 | Msa0218240:CDS | 45.0% | |
| TCTTCTTGCAACTGGGATTC+TGG | - | chr2_1:65378074-65378093 | Msa0218240:CDS | 45.0% | |
| GAGATATGTCAAGGGACAGA+AGG | - | chr2_1:65378110-65378129 | Msa0218240:CDS | 45.0% | |
| CCGGGAGAAAAGGATTTACA+AGG | - | chr2_1:65378265-65378284 | Msa0218240:intron | 45.0% | |
| ! | GTGCTTTTGTGGGAGTTGTA+AGG | - | chr2_1:65378312-65378331 | Msa0218240:intron | 45.0% |
| ! | GCTTTTGTGGGAGTTGTAAG+GGG | - | chr2_1:65378314-65378333 | Msa0218240:intron | 45.0% |
| AGGGGAATCAGGCAAGTAAA+TGG | - | chr2_1:65378332-65378351 | Msa0218240:intron | 45.0% | |
| GGAATCAGGCAAGTAAATGG+AGG | - | chr2_1:65378335-65378354 | Msa0218240:intron | 45.0% | |
| GTGTGGGTTTAGCATCTTGT+AGG | - | chr2_1:65378380-65378399 | Msa0218240:intron | 45.0% | |
| ATCCAACGGAAGACTTGAAC+AGG | + | chr2_1:65378557-65378576 | None:intergenic | 45.0% | |
| TAAAGAGGTCCAAATGGTCC+TGG | - | chr2_1:65378585-65378604 | Msa0218240:intron | 45.0% | |
| AAAGAGGTCCAAATGGTCCT+GGG | - | chr2_1:65378586-65378605 | Msa0218240:intron | 45.0% | |
| TGAAATCACCCAGGACCATT+TGG | + | chr2_1:65378597-65378616 | None:intergenic | 45.0% | |
| TCTGCATTGTGAAATCACCC+AGG | + | chr2_1:65378606-65378625 | None:intergenic | 45.0% | |
| GTCTCTTTCAACTCCATGCA+TGG | + | chr2_1:65378796-65378815 | None:intergenic | 45.0% | |
| GAGTTGAAAGAGACTTCTGC+AGG | - | chr2_1:65378802-65378821 | Msa0218240:intron | 45.0% | |
| ! | AGCGCATCCTCTTCTTTTCT+TGG | + | chr2_1:65378836-65378855 | None:intergenic | 45.0% |
| AAAAGAAGAGGATGCGCTCT+TGG | - | chr2_1:65378838-65378857 | Msa0218240:intron | 45.0% | |
| TGACTGTTTGGGAGAGCTTA+TGG | - | chr2_1:65379447-65379466 | Msa0218240:CDS | 45.0% | |
| AGTGTCTGTGCTGGACTAAT+TGG | + | chr2_1:65379775-65379794 | None:intergenic | 45.0% | |
| ATTAGTCCAGCACAGACACT+CGG | - | chr2_1:65379775-65379794 | Msa0218240:intron | 45.0% | |
| TCAGTGCAGGGAACAATTGA+CGG | - | chr2_1:65379802-65379821 | Msa0218240:CDS | 45.0% | |
| ! | TGACGGATATATAGTCACGG+TGG | - | chr2_1:65379834-65379853 | Msa0218240:CDS | 45.0% |
| ATATATAGTCACGGTGGACC+TGG | - | chr2_1:65379840-65379859 | Msa0218240:CDS | 45.0% | |
| TATATAGTCACGGTGGACCT+GGG | - | chr2_1:65379841-65379860 | Msa0218240:CDS | 45.0% | |
| AGAAGATCCTTCAGCTTGAC+AGG | + | chr2_1:65378060-65378079 | None:intergenic | 45.0% | |
| CTGAAGGATCTTCTTGCAAC+TGG | - | chr2_1:65378066-65378085 | Msa0218240:CDS | 45.0% | |
| TCTTCTTGCAACTGGGATTC+TGG | - | chr2_1:65378074-65378093 | Msa0218240:CDS | 45.0% | |
| GAGATATGTCAAGGGACAGA+AGG | - | chr2_1:65378110-65378129 | Msa0218240:CDS | 45.0% | |
| CCGGGAGAAAAGGATTTACA+AGG | - | chr2_1:65378265-65378284 | Msa0218240:intron | 45.0% | |
| ! | GTGCTTTTGTGGGAGTTGTA+AGG | - | chr2_1:65378312-65378331 | Msa0218240:intron | 45.0% |
| ! | GCTTTTGTGGGAGTTGTAAG+GGG | - | chr2_1:65378314-65378333 | Msa0218240:intron | 45.0% |
| AGGGGAATCAGGCAAGTAAA+TGG | - | chr2_1:65378332-65378351 | Msa0218240:intron | 45.0% | |
| GGAATCAGGCAAGTAAATGG+AGG | - | chr2_1:65378335-65378354 | Msa0218240:intron | 45.0% | |
| GTGTGGGTTTAGCATCTTGT+AGG | - | chr2_1:65378380-65378399 | Msa0218240:intron | 45.0% | |
| ATCCAACGGAAGACTTGAAC+AGG | + | chr2_1:65378557-65378576 | None:intergenic | 45.0% | |
| TAAAGAGGTCCAAATGGTCC+TGG | - | chr2_1:65378585-65378604 | Msa0218240:intron | 45.0% | |
| AAAGAGGTCCAAATGGTCCT+GGG | - | chr2_1:65378586-65378605 | Msa0218240:intron | 45.0% | |
| TGAAATCACCCAGGACCATT+TGG | + | chr2_1:65378597-65378616 | None:intergenic | 45.0% | |
| TCTGCATTGTGAAATCACCC+AGG | + | chr2_1:65378606-65378625 | None:intergenic | 45.0% | |
| GTCTCTTTCAACTCCATGCA+TGG | + | chr2_1:65378796-65378815 | None:intergenic | 45.0% | |
| GAGTTGAAAGAGACTTCTGC+AGG | - | chr2_1:65378802-65378821 | Msa0218240:intron | 45.0% | |
| ! | AGCGCATCCTCTTCTTTTCT+TGG | + | chr2_1:65378836-65378855 | None:intergenic | 45.0% |
| AAAAGAAGAGGATGCGCTCT+TGG | - | chr2_1:65378838-65378857 | Msa0218240:intron | 45.0% | |
| TGACTGTTTGGGAGAGCTTA+TGG | - | chr2_1:65379447-65379466 | Msa0218240:CDS | 45.0% | |
| AGTGTCTGTGCTGGACTAAT+TGG | + | chr2_1:65379775-65379794 | None:intergenic | 45.0% | |
| ATTAGTCCAGCACAGACACT+CGG | - | chr2_1:65379775-65379794 | Msa0218240:intron | 45.0% | |
| TCAGTGCAGGGAACAATTGA+CGG | - | chr2_1:65379802-65379821 | Msa0218240:CDS | 45.0% | |
| ! | TGACGGATATATAGTCACGG+TGG | - | chr2_1:65379834-65379853 | Msa0218240:CDS | 45.0% |
| ATATATAGTCACGGTGGACC+TGG | - | chr2_1:65379840-65379859 | Msa0218240:CDS | 45.0% | |
| TATATAGTCACGGTGGACCT+GGG | - | chr2_1:65379841-65379860 | Msa0218240:CDS | 45.0% | |
| ! | TGAAGGGAGGTTCTGGTAAG+AGG | - | chr2_1:65378031-65378050 | Msa0218240:CDS | 50.0% |
| GAGGTTTCCTGTCAAGCTGA+AGG | - | chr2_1:65378050-65378069 | Msa0218240:CDS | 50.0% | |
| TCTTGCAACTGGGATTCTGG+AGG | - | chr2_1:65378077-65378096 | Msa0218240:CDS | 50.0% | |
| CTTGCAACTGGGATTCTGGA+GGG | - | chr2_1:65378078-65378097 | Msa0218240:CDS | 50.0% | |
| TGATGTGTAGGCGCGTAAAC+CGG | - | chr2_1:65378246-65378265 | Msa0218240:intron | 50.0% | |
| TGGGAGTTGTAAGGGGAATC+AGG | - | chr2_1:65378321-65378340 | Msa0218240:intron | 50.0% | |
| CAGGCAAGTAAATGGAGGGA+TGG | - | chr2_1:65378340-65378359 | Msa0218240:intron | 50.0% | |
| AGGCATTCATGACATCCCGA+AGG | + | chr2_1:65378537-65378556 | None:intergenic | 50.0% | |
| TGCCTGTTCAAGTCTTCCGT+TGG | - | chr2_1:65378552-65378571 | Msa0218240:intron | 50.0% | |
| AGAGGATGCGCTCTTGGTTT+CGG | - | chr2_1:65378844-65378863 | Msa0218240:intron | 50.0% | |
| ACACTCGGTTCTTCAGTGCA+GGG | - | chr2_1:65379790-65379809 | Msa0218240:intron | 50.0% | |
| CAGTGCAGGGAACAATTGAC+GGG | - | chr2_1:65379803-65379822 | Msa0218240:CDS | 50.0% | |
| CTTTCAGCTGTTCAGAACCC+AGG | + | chr2_1:65379861-65379880 | None:intergenic | 50.0% | |
| !! | CTGGGTTCTGAACAGCTGAA+AGG | - | chr2_1:65379859-65379878 | Msa0218240:CDS | 50.0% |
| ! | TGAAGGGAGGTTCTGGTAAG+AGG | - | chr2_1:65378031-65378050 | Msa0218240:CDS | 50.0% |
| GAGGTTTCCTGTCAAGCTGA+AGG | - | chr2_1:65378050-65378069 | Msa0218240:CDS | 50.0% | |
| TCTTGCAACTGGGATTCTGG+AGG | - | chr2_1:65378077-65378096 | Msa0218240:CDS | 50.0% | |
| CTTGCAACTGGGATTCTGGA+GGG | - | chr2_1:65378078-65378097 | Msa0218240:CDS | 50.0% | |
| TGATGTGTAGGCGCGTAAAC+CGG | - | chr2_1:65378246-65378265 | Msa0218240:intron | 50.0% | |
| TGGGAGTTGTAAGGGGAATC+AGG | - | chr2_1:65378321-65378340 | Msa0218240:intron | 50.0% | |
| CAGGCAAGTAAATGGAGGGA+TGG | - | chr2_1:65378340-65378359 | Msa0218240:intron | 50.0% | |
| AGGCATTCATGACATCCCGA+AGG | + | chr2_1:65378537-65378556 | None:intergenic | 50.0% | |
| TGCCTGTTCAAGTCTTCCGT+TGG | - | chr2_1:65378552-65378571 | Msa0218240:intron | 50.0% | |
| AGAGGATGCGCTCTTGGTTT+CGG | - | chr2_1:65378844-65378863 | Msa0218240:intron | 50.0% | |
| ACACTCGGTTCTTCAGTGCA+GGG | - | chr2_1:65379790-65379809 | Msa0218240:intron | 50.0% | |
| CAGTGCAGGGAACAATTGAC+GGG | - | chr2_1:65379803-65379822 | Msa0218240:CDS | 50.0% | |
| CTTTCAGCTGTTCAGAACCC+AGG | + | chr2_1:65379861-65379880 | None:intergenic | 50.0% | |
| !! | CTGGGTTCTGAACAGCTGAA+AGG | - | chr2_1:65379859-65379878 | Msa0218240:CDS | 50.0% |
| GATGTGTAGGCGCGTAAACC+GGG | - | chr2_1:65378247-65378266 | Msa0218240:intron | 55.0% | |
| GAAGAACCGAGTGTCTGTGC+TGG | + | chr2_1:65379784-65379803 | None:intergenic | 55.0% | |
| GACACTCGGTTCTTCAGTGC+AGG | - | chr2_1:65379789-65379808 | Msa0218240:intron | 55.0% | |
| GATGTGTAGGCGCGTAAACC+GGG | - | chr2_1:65378247-65378266 | Msa0218240:intron | 55.0% | |
| GAAGAACCGAGTGTCTGTGC+TGG | + | chr2_1:65379784-65379803 | None:intergenic | 55.0% | |
| GACACTCGGTTCTTCAGTGC+AGG | - | chr2_1:65379789-65379808 | Msa0218240:intron | 55.0% | |
| GGCGCGTAAACCGGGAGAAA+AGG | - | chr2_1:65378255-65378274 | Msa0218240:intron | 60.0% | |
| GGCGCGTAAACCGGGAGAAA+AGG | - | chr2_1:65378255-65378274 | Msa0218240:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 65378030 | 65379900 | 65378030 | ID=Msa0218240;Name=Msa0218240 |
| chr2_1 | mRNA | 65378030 | 65379900 | 65378030 | ID=Msa0218240-mRNA-1;Parent=Msa0218240;Name=Msa0218240-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|1|1|1|5|0|253 |
| chr2_1 | exon | 65379799 | 65379900 | 65379799 | ID=Msa0218240-mRNA-1:exon:18157;Parent=Msa0218240-mRNA-1 |
| chr2_1 | exon | 65379549 | 65379674 | 65379549 | ID=Msa0218240-mRNA-1:exon:18156;Parent=Msa0218240-mRNA-1 |
| chr2_1 | exon | 65379278 | 65379482 | 65379278 | ID=Msa0218240-mRNA-1:exon:18155;Parent=Msa0218240-mRNA-1 |
| chr2_1 | exon | 65378990 | 65379184 | 65378990 | ID=Msa0218240-mRNA-1:exon:18154;Parent=Msa0218240-mRNA-1 |
| chr2_1 | exon | 65378030 | 65378163 | 65378030 | ID=Msa0218240-mRNA-1:exon:18153;Parent=Msa0218240-mRNA-1 |
| chr2_1 | CDS | 65379799 | 65379900 | 65379799 | ID=Msa0218240-mRNA-1:cds;Parent=Msa0218240-mRNA-1 |
| chr2_1 | CDS | 65379549 | 65379674 | 65379549 | ID=Msa0218240-mRNA-1:cds;Parent=Msa0218240-mRNA-1 |
| chr2_1 | CDS | 65379278 | 65379482 | 65379278 | ID=Msa0218240-mRNA-1:cds;Parent=Msa0218240-mRNA-1 |
| chr2_1 | CDS | 65378990 | 65379184 | 65378990 | ID=Msa0218240-mRNA-1:cds;Parent=Msa0218240-mRNA-1 |
| chr2_1 | CDS | 65378030 | 65378163 | 65378030 | ID=Msa0218240-mRNA-1:cds;Parent=Msa0218240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
