AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0387580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387580 MtrunA17_Chr7g0265981 89.286 1176 126 0 2 1177 282 1457 0.0 2175
Msa0387580 MtrunA17_Chr7g0265971 86.218 1190 148 3 2 1177 276 1463 0.0 2121
Msa0387580 MtrunA17_Chr1g0171351 69.289 1195 348 3 2 1177 274 1468 0.0 1785
Msa0387580 MtrunA17_Chr1g0198291 70.245 1183 346 2 1 1177 286 1468 0.0 1773
Msa0387580 MtrunA17_Chr7g0265961 67.772 1176 312 3 2 1177 280 1388 0.0 1676
Msa0387580 MtrunA17_Chr2g0332241 61.310 1176 443 4 2 1177 265 1428 0.0 1531
Msa0387580 MtrunA17_Chr2g0332211 61.460 1178 440 5 2 1177 346 1511 0.0 1529
Msa0387580 MtrunA17_Chr2g0332211 24.682 628 405 17 597 1173 242 852 2.11e-39 160
Msa0387580 MtrunA17_Chr2g0332221 61.224 1176 443 4 2 1177 265 1427 0.0 1529
Msa0387580 MtrunA17_Chr4g0003981 61.290 1178 443 5 2 1177 271 1437 0.0 1511
Msa0387580 MtrunA17_Chr7g0262241 59.417 1200 457 6 2 1177 260 1453 0.0 1510
Msa0387580 MtrunA17_Chr7g0262241 23.613 631 410 14 598 1173 157 770 2.24e-36 150
Msa0387580 MtrunA17_Chr1g0148841 59.548 1194 455 6 2 1177 264 1447 0.0 1506
Msa0387580 MtrunA17_Chr7g0262231 58.603 1203 465 6 2 1177 260 1456 0.0 1500
Msa0387580 MtrunA17_Chr7g0262231 24.089 631 407 15 598 1173 157 770 1.75e-39 160
Msa0387580 MtrunA17_Chr7g0261971 58.716 1199 466 6 2 1177 256 1448 0.0 1483
Msa0387580 MtrunA17_Chr7g0261971 23.259 632 411 15 598 1173 153 766 8.36e-38 154
Msa0387580 MtrunA17_Chr7g0261951 58.701 1201 463 7 2 1177 260 1452 0.0 1479
Msa0387580 MtrunA17_Chr7g0261951 23.734 632 408 15 598 1173 157 770 5.42e-38 155
Msa0387580 MtrunA17_Chr7g0261981 58.376 1182 453 7 2 1177 260 1408 0.0 1464
Msa0387580 MtrunA17_Chr7g0261981 23.847 629 411 16 598 1173 157 770 1.44e-37 154
Msa0387580 MtrunA17_Chr3g0138261 58.586 1188 469 6 2 1177 264 1440 0.0 1449
Msa0387580 MtrunA17_Chr3g0138261 24.113 564 358 15 598 1109 161 706 3.56e-34 143
Msa0387580 MtrunA17_Chr4g0003971 59.269 1176 441 5 2 1177 259 1396 0.0 1440
Msa0387580 MtrunA17_Chr4g0003971 23.138 631 423 13 597 1177 155 773 1.73e-37 154
Msa0387580 MtrunA17_Chr1g0148811 58.291 1182 478 6 2 1177 252 1424 0.0 1434
Msa0387580 MtrunA17_Chr7g0262221 56.112 1219 451 9 2 1177 261 1438 0.0 1425
Msa0387580 MtrunA17_Chr7g0262221 22.875 647 413 16 598 1176 158 786 4.71e-36 149
Msa0387580 MtrunA17_Chr4g0062871 57.627 1180 489 4 1 1177 247 1418 0.0 1424
Msa0387580 MtrunA17_Chr7g0262261 57.395 1190 461 6 2 1177 231 1388 0.0 1411
Msa0387580 MtrunA17_Chr7g0262261 41.346 104 59 2 1075 1177 1522 1624 7.66e-16 83.6
Msa0387580 MtrunA17_Chr8g0340651 57.048 1206 487 6 2 1177 276 1480 0.0 1389
Msa0387580 MtrunA17_Chr8g0340651 24.109 589 369 17 597 1122 172 745 2.72e-37 153
Msa0387580 MtrunA17_Chr2g0331081 56.187 1196 498 5 2 1177 277 1466 0.0 1378
Msa0387580 MtrunA17_Chr2g0331081 25.490 561 351 17 597 1105 173 718 6.96e-37 152
Msa0387580 MtrunA17_Chr7g0262251 56.426 1175 446 6 2 1160 273 1397 0.0 1377
Msa0387580 MtrunA17_Chr7g0262251 23.226 620 408 17 598 1173 170 765 3.35e-37 152
Msa0387580 MtrunA17_Chr4g0004021 63.419 1006 355 4 2 1004 269 1264 0.0 1334
Msa0387580 MtrunA17_Chr4g0004021 24.209 632 405 20 598 1173 166 779 1.30e-32 137
Msa0387580 MtrunA17_Chr5g0429871 54.928 1187 506 7 2 1177 77 1245 0.0 1306
Msa0387580 MtrunA17_Chr0c20g0493841 54.121 1177 528 6 2 1177 266 1431 0.0 1302
Msa0387580 MtrunA17_Chr3g0104621 51.730 1214 530 9 2 1177 153 1348 0.0 1274
Msa0387580 MtrunA17_Chr3g0104621 24.468 564 352 14 597 1105 50 594 4.15e-38 155
Msa0387580 MtrunA17_Chr7g0265991 95.186 644 20 1 545 1177 1 644 0.0 1268
Msa0387580 MtrunA17_Chr7g0265991 23.529 510 344 12 30 515 153 640 5.88e-23 105
Msa0387580 MtrunA17_Chr7g0262321 51.474 1187 507 10 3 1177 2 1131 0.0 1206
Msa0387580 MtrunA17_Chr7g0266001 97.282 515 14 0 1 515 160 674 0.0 1045
Msa0387580 MtrunA17_Chr7g0266001 24.525 632 408 16 597 1173 57 674 1.66e-35 145
Msa0387580 MtrunA17_Chr4g0069211 55.013 798 337 6 2 798 265 1041 0.0 878
Msa0387580 MtrunA17_Chr4g0069211 24.625 666 414 22 568 1177 133 766 1.27e-37 153
Msa0387580 MtrunA17_Chr7g0215001 55.319 376 146 1 751 1104 1 376 1.11e-146 446
Msa0387580 MtrunA17_Chr4g0069221 48.276 377 194 1 801 1177 1 376 9.35e-123 383
Msa0387580 MtrunA17_Chr6g0472481 72.065 247 57 1 591 825 1 247 4.45e-119 369
Msa0387580 MtrunA17_Chr7g0238421 52.344 256 81 4 611 866 12 226 5.06e-70 234
Msa0387580 MtrunA17_Chr1g0198931 27.581 620 406 17 516 1107 13 617 9.10e-59 215
Msa0387580 MtrunA17_Chr1g0198931 23.944 426 279 17 37 439 206 609 9.38e-18 89.0
Msa0387580 MtrunA17_Chr1g0176441 26.738 561 364 11 570 1101 143 685 2.40e-57 212
Msa0387580 MtrunA17_Chr1g0176441 24.824 427 281 13 39 439 273 685 1.07e-20 98.6
Msa0387580 MtrunA17_Chr2g0316301 28.033 610 389 16 555 1138 12 597 1.18e-55 205
Msa0387580 MtrunA17_Chr2g0316301 24.249 433 274 9 39 453 174 570 5.42e-21 99.0
Msa0387580 MtrunA17_Chr1g0208391 28.788 528 345 10 603 1114 93 605 5.72e-54 202
Msa0387580 MtrunA17_Chr1g0208391 25.336 446 307 12 18 453 177 606 3.09e-26 116
Msa0387580 MtrunA17_Chr1g0213091 24.712 607 390 11 566 1117 66 660 6.24e-53 199
Msa0387580 MtrunA17_Chr1g0213091 22.080 548 351 14 26 511 212 745 6.54e-23 105
Msa0387580 MtrunA17_Chr1g0200651 25.595 672 432 16 551 1176 17 666 1.79e-51 193
Msa0387580 MtrunA17_Chr1g0200651 23.279 494 329 17 43 511 196 664 7.04e-17 85.9
Msa0387580 MtrunA17_Chr1g0176451 26.173 554 357 14 576 1101 1 530 4.99e-51 190
Msa0387580 MtrunA17_Chr1g0176451 25.298 419 281 12 39 439 126 530 1.75e-21 100
Msa0387580 MtrunA17_Chr7g0267971 25.938 640 400 16 570 1175 132 731 5.00e-51 193
Msa0387580 MtrunA17_Chr7g0267971 34.167 120 76 3 39 157 262 379 3.54e-16 84.0
Msa0387580 MtrunA17_Chr8g0390471 82.828 99 17 0 603 701 5 103 6.12e-51 174
Msa0387580 MtrunA17_Chr7g0263351 23.887 674 438 10 573 1177 82 749 6.94e-51 193
Msa0387580 MtrunA17_Chr7g0263351 21.315 441 330 4 26 453 217 653 3.15e-25 113
Msa0387580 MtrunA17_Chr8g0359931 27.176 563 371 12 573 1119 34 573 2.36e-50 189
Msa0387580 MtrunA17_Chr8g0359931 30.968 155 100 4 39 188 167 319 3.60e-16 83.6
Msa0387580 MtrunA17_Chr4g0004001 46.023 176 92 1 1002 1177 16 188 3.95e-50 175
Msa0387580 MtrunA17_Chr5g0408061 25.000 580 382 15 547 1101 17 568 7.36e-50 188
Msa0387580 MtrunA17_Chr5g0408061 24.178 426 279 14 37 439 164 568 9.01e-22 101
Msa0387580 MtrunA17_Chr5g0446901 26.500 600 384 14 509 1085 36 601 1.54e-48 183
Msa0387580 MtrunA17_Chr5g0446901 31.387 137 90 4 27 162 202 335 6.74e-13 73.2
Msa0387580 MtrunA17_Chr4g0050251 27.644 539 348 14 593 1109 64 582 3.32e-48 184
Msa0387580 MtrunA17_Chr4g0050251 23.967 484 347 10 37 509 173 646 1.26e-26 117
Msa0387580 MtrunA17_Chr3g0102731 26.047 549 354 13 573 1085 54 586 3.45e-48 182
Msa0387580 MtrunA17_Chr3g0102731 28.481 158 109 4 20 175 179 334 1.20e-12 72.0
Msa0387580 MtrunA17_Chr4g0039251 25.939 586 381 12 602 1157 92 654 7.65e-48 183
Msa0387580 MtrunA17_Chr4g0039251 26.256 438 299 8 27 448 183 612 8.07e-29 124
Msa0387580 MtrunA17_Chr4g0039261 26.000 700 404 19 527 1177 4 638 3.49e-47 181
Msa0387580 MtrunA17_Chr4g0039261 26.397 519 326 17 27 513 141 635 3.48e-29 125
Msa0387580 MtrunA17_Chr5g0411621 34.862 327 191 7 597 913 45 359 2.64e-46 179
Msa0387580 MtrunA17_Chr5g0411621 27.083 144 104 1 39 182 153 295 1.87e-14 78.2
Msa0387580 MtrunA17_Chr1g0199471 35.060 251 157 3 596 846 510 754 9.82e-46 179
Msa0387580 MtrunA17_Chr1g0199471 35.252 139 86 4 27 163 608 744 8.09e-16 83.2
Msa0387580 MtrunA17_Chr7g0264441 35.036 274 161 5 573 846 260 516 2.61e-45 177
Msa0387580 MtrunA17_Chr7g0264441 37.121 132 79 4 34 163 377 506 7.63e-15 79.7
Msa0387580 MtrunA17_Chr4g0050221 26.740 546 338 13 597 1109 25 541 3.77e-45 174
Msa0387580 MtrunA17_Chr4g0050221 24.158 505 317 18 37 509 131 601 1.17e-18 91.7
Msa0387580 MtrunA17_Chr2g0318061 29.049 389 233 13 574 941 1 367 5.05e-45 167
Msa0387580 MtrunA17_Chr2g0318061 32.609 138 90 3 39 175 132 267 2.40e-15 79.3
Msa0387580 MtrunA17_Chr4g0050291 27.239 536 333 14 593 1096 40 550 6.68e-45 173
Msa0387580 MtrunA17_Chr4g0050291 24.950 497 348 11 27 509 140 625 4.03e-30 128
Msa0387580 MtrunA17_Chr4g0028621 38.095 252 147 3 595 846 502 744 9.52e-43 170
Msa0387580 MtrunA17_Chr4g0028621 38.129 139 82 4 27 163 598 734 1.20e-12 72.8
Msa0387580 MtrunA17_Chr4g0065231 26.252 579 378 16 576 1132 44 595 1.23e-42 166
Msa0387580 MtrunA17_Chr4g0065231 23.285 481 330 10 37 506 177 629 2.29e-28 122
Msa0387580 MtrunA17_Chr4g0050261 25.400 563 347 14 593 1096 64 612 1.76e-42 167
Msa0387580 MtrunA17_Chr4g0050261 22.533 537 352 14 26 509 162 687 8.90e-22 102
Msa0387580 MtrunA17_Chr1g0180971 34.457 267 169 3 596 862 406 666 1.91e-42 167
Msa0387580 MtrunA17_Chr1g0180971 39.394 132 76 4 34 163 511 640 3.09e-15 80.9
Msa0387580 MtrunA17_Chr8g0393191 33.684 285 177 5 576 858 43 317 4.32e-42 166
Msa0387580 MtrunA17_Chr8g0393191 26.950 141 102 1 39 179 172 311 8.69e-14 76.3
Msa0387580 MtrunA17_Chr8g0393191 25.217 230 156 4 894 1118 518 736 3.73e-12 70.9
Msa0387580 MtrunA17_Chr8g0390461 51.389 144 68 1 432 573 1 144 5.34e-42 151
Msa0387580 MtrunA17_Chr8g0384391 24.779 565 387 11 602 1142 55 605 2.19e-41 162
Msa0387580 MtrunA17_Chr8g0384391 22.008 518 352 11 25 513 141 635 6.74e-23 105
Msa0387580 MtrunA17_Chr1g0202431 26.296 540 343 15 603 1124 50 552 5.98e-41 160
Msa0387580 MtrunA17_Chr1g0202431 21.236 518 357 11 16 511 113 601 6.62e-26 114
Msa0387580 MtrunA17_Chr6g0477811 25.046 543 348 14 597 1100 60 582 5.74e-40 159
Msa0387580 MtrunA17_Chr6g0477811 25.952 420 279 13 43 443 172 578 8.60e-25 111
Msa0387580 MtrunA17_Chr3g0130331 25.532 611 399 17 586 1167 44 627 1.57e-36 147
Msa0387580 MtrunA17_Chr3g0130331 20.939 511 363 12 25 513 144 635 1.44e-19 94.7
Msa0387580 MtrunA17_Chr4g0026731 25.294 510 329 13 645 1114 22 519 5.20e-35 142
Msa0387580 MtrunA17_Chr4g0026731 24.324 518 348 14 26 509 68 575 5.16e-28 120
Msa0387580 MtrunA17_Chr4g0039231 24.057 557 321 12 643 1119 1 535 1.20e-34 142
Msa0387580 MtrunA17_Chr4g0039231 23.285 481 303 10 26 444 49 525 1.03e-24 110
Msa0387580 MtrunA17_Chr4g0050201 23.297 558 373 18 645 1176 5 533 5.39e-29 123
Msa0387580 MtrunA17_Chr4g0050201 21.443 499 338 14 36 509 61 530 1.30e-18 90.9
Msa0387580 MtrunA17_Chr8g0390481 85.714 56 7 1 733 787 7 62 1.52e-24 98.2
Msa0387580 MtrunA17_Chr2g0327241 22.545 550 363 15 595 1110 118 638 2.03e-23 107
Msa0387580 MtrunA17_Chr3g0093331 34.184 196 124 5 622 814 17 210 7.09e-23 99.8
Msa0387580 MtrunA17_Chr3g0093331 28.148 135 97 0 39 173 102 236 2.18e-13 71.6
Msa0387580 MtrunA17_Chr8g0390451 75.610 41 10 0 2 42 46 86 1.74e-14 70.1
Msa0387580 MtrunA17_Chr4g0047831 40.244 82 49 0 720 801 1 82 3.72e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387580 AT1G66950.1 72.812 1177 309 3 2 1177 288 1454 0.0 1842
Msa0387580 AT2G36380.1 71.854 1176 323 2 2 1177 286 1453 0.0 1811
Msa0387580 AT2G36380.1 24.006 629 415 15 597 1173 182 799 1.33e-36 151
Msa0387580 AT1G15520.1 60.408 1177 445 6 2 1177 267 1423 0.0 1508
Msa0387580 AT3G16340.1 57.980 1178 472 5 2 1177 260 1416 0.0 1427
Msa0387580 AT2G26910.1 57.191 1182 493 4 1 1177 247 1420 0.0 1414
Msa0387580 AT3G16340.2 57.640 1178 471 6 2 1177 260 1411 0.0 1411
Msa0387580 AT1G15210.1 57.917 1181 472 6 2 1177 282 1442 0.0 1395
Msa0387580 AT1G15210.1 24.382 566 371 12 597 1115 178 733 1.59e-39 160
Msa0387580 AT1G59870.1 57.912 1188 486 5 2 1177 284 1469 0.0 1391
Msa0387580 AT1G59870.1 24.956 565 367 13 598 1115 181 735 6.41e-39 159
Msa0387580 AT1G15520.2 61.900 1021 370 5 2 1022 267 1268 0.0 1338
Msa0387580 AT1G15520.2 25.118 633 398 17 598 1173 164 777 3.21e-40 162
Msa0387580 AT2G29940.1 54.592 1176 511 4 2 1177 274 1426 0.0 1333
Msa0387580 AT3G53480.1 51.949 1180 549 7 1 1177 286 1450 0.0 1273
Msa0387580 AT3G53480.1 24.299 642 392 26 597 1173 183 795 6.01e-34 142
Msa0387580 AT3G30842.1 52.037 1178 545 6 2 1177 259 1418 0.0 1266
Msa0387580 AT3G30842.1 24.107 560 358 14 598 1105 156 700 1.23e-40 164
Msa0387580 AT2G37280.1 51.019 1178 561 5 1 1177 251 1413 0.0 1261
Msa0387580 AT2G37280.1 23.567 628 414 17 597 1173 148 760 8.35e-36 149
Msa0387580 AT2G37280.4 51.019 1178 561 5 1 1177 93 1255 0.0 1261
Msa0387580 AT2G37280.4 23.177 617 392 18 616 1173 9 602 1.19e-30 132
Msa0387580 AT2G37280.3 51.019 1178 561 5 1 1177 280 1442 0.0 1261
Msa0387580 AT2G37280.3 22.527 657 414 17 597 1173 148 789 2.07e-32 137
Msa0387580 AT2G37280.2 52.342 1089 502 5 1 1087 251 1324 0.0 1204
Msa0387580 AT2G37280.2 23.567 628 414 17 597 1173 148 760 7.13e-36 149
Msa0387580 AT4G15236.1 49.109 1179 558 8 2 1177 251 1390 0.0 1179
Msa0387580 AT4G15215.9 48.770 1179 569 8 2 1177 248 1394 0.0 1174
Msa0387580 AT4G15215.9 23.651 630 419 18 597 1177 144 760 2.98e-37 153
Msa0387580 AT4G15215.4 48.770 1179 569 8 2 1177 248 1394 0.0 1174
Msa0387580 AT4G15215.4 23.651 630 419 18 597 1177 144 760 2.98e-37 153
Msa0387580 AT4G15215.11 48.770 1179 569 8 2 1177 251 1397 0.0 1174
Msa0387580 AT4G15215.11 23.651 630 419 18 597 1177 147 763 2.69e-37 153
Msa0387580 AT4G15215.5 48.770 1179 569 8 2 1177 248 1394 0.0 1174
Msa0387580 AT4G15215.5 23.651 630 419 18 597 1177 144 760 2.98e-37 153
Msa0387580 AT4G15215.3 48.770 1179 569 8 2 1177 248 1394 0.0 1174
Msa0387580 AT4G15215.3 23.651 630 419 18 597 1177 144 760 2.98e-37 153
Msa0387580 AT4G15215.2 48.770 1179 569 8 2 1177 248 1394 0.0 1174
Msa0387580 AT4G15215.2 23.651 630 419 18 597 1177 144 760 2.98e-37 153
Msa0387580 AT4G15233.8 48.601 1179 564 6 2 1177 244 1383 0.0 1170
Msa0387580 AT4G15233.1 48.601 1179 564 6 2 1177 253 1392 0.0 1170
Msa0387580 AT4G15233.3 48.601 1179 564 6 2 1177 191 1330 0.0 1169
Msa0387580 AT4G15233.6 48.601 1179 564 6 2 1177 191 1330 0.0 1169
Msa0387580 AT4G15230.3 48.346 1179 574 9 2 1177 254 1400 0.0 1167
Msa0387580 AT4G15230.3 23.077 637 414 19 597 1177 150 766 5.10e-34 142
Msa0387580 AT4G15230.4 48.346 1179 574 9 2 1177 175 1321 0.0 1167
Msa0387580 AT4G15230.4 23.077 637 414 19 597 1177 71 687 3.48e-34 143
Msa0387580 AT4G15230.1 48.346 1179 574 9 2 1177 254 1400 0.0 1167
Msa0387580 AT4G15230.1 23.077 637 414 19 597 1177 150 766 5.10e-34 142
Msa0387580 AT4G15215.8 48.346 1179 567 9 2 1177 248 1387 0.0 1155
Msa0387580 AT4G15215.8 23.810 630 411 19 597 1177 144 753 3.94e-36 149
Msa0387580 AT4G15215.10 48.346 1179 567 9 2 1177 248 1387 0.0 1155
Msa0387580 AT4G15215.10 23.810 630 411 19 597 1177 144 753 3.94e-36 149
Msa0387580 AT4G15215.6 48.346 1179 567 9 2 1177 248 1387 0.0 1155
Msa0387580 AT4G15215.6 23.810 630 411 19 597 1177 144 753 3.94e-36 149
Msa0387580 AT4G15215.7 48.346 1179 567 9 2 1177 248 1387 0.0 1155
Msa0387580 AT4G15215.7 23.810 630 411 19 597 1177 144 753 3.94e-36 149
Msa0387580 AT4G15215.1 48.346 1179 567 9 2 1177 251 1390 0.0 1155
Msa0387580 AT4G15215.1 23.810 630 411 19 597 1177 147 756 5.28e-36 149
Msa0387580 AT4G15233.7 47.837 1179 555 7 2 1177 253 1374 0.0 1140
Msa0387580 AT4G15233.7 23.701 616 414 15 599 1177 151 747 6.30e-36 149
Msa0387580 AT4G15233.2 48.003 1152 534 6 2 1126 253 1366 0.0 1130
Msa0387580 AT4G15233.2 22.871 634 415 16 599 1177 151 765 7.28e-34 142
Msa0387580 AT4G15230.2 49.036 1089 521 8 2 1087 254 1311 0.0 1101
Msa0387580 AT4G15230.2 23.186 634 411 19 600 1177 153 766 3.15e-34 143
Msa0387580 AT4G15233.5 50.963 571 279 1 607 1177 680 1249 0.0 611
Msa0387580 AT4G15233.5 48.008 527 245 4 2 525 191 691 2.46e-160 511
Msa0387580 AT4G15233.5 23.693 612 411 15 599 1173 89 681 2.51e-35 147
Msa0387580 AT4G15233.5 24.439 446 298 13 27 455 767 1190 4.25e-30 130
Msa0387580 AT4G15233.4 50.963 571 279 1 607 1177 680 1249 0.0 611
Msa0387580 AT4G15233.4 48.008 527 245 4 2 525 191 691 2.46e-160 511
Msa0387580 AT4G15233.4 23.693 612 411 15 599 1173 89 681 2.51e-35 147
Msa0387580 AT4G15233.4 24.439 446 298 13 27 455 767 1190 4.25e-30 130
Msa0387580 AT2G01320.8 28.517 526 349 10 603 1114 90 602 5.35e-58 213
Msa0387580 AT2G01320.8 26.726 449 303 12 25 463 181 613 5.05e-29 125
Msa0387580 AT2G01320.5 28.517 526 349 10 603 1114 90 602 5.35e-58 213
Msa0387580 AT2G01320.5 26.726 449 303 12 25 463 181 613 5.05e-29 125
Msa0387580 AT2G01320.3 28.517 526 349 10 603 1114 90 602 1.67e-57 213
Msa0387580 AT2G01320.3 27.093 454 301 13 22 463 178 613 5.34e-29 125
Msa0387580 AT2G01320.1 28.517 526 349 10 603 1114 90 602 1.99e-57 213
Msa0387580 AT2G01320.1 26.549 452 306 12 22 463 178 613 6.02e-29 125
Msa0387580 AT2G01320.4 28.517 526 349 10 603 1114 90 602 1.99e-57 213
Msa0387580 AT2G01320.4 26.549 452 306 12 22 463 178 613 6.02e-29 125
Msa0387580 AT2G01320.2 28.517 526 349 10 603 1114 90 602 2.13e-57 213
Msa0387580 AT2G01320.2 27.093 454 301 13 22 463 178 613 6.28e-29 125
Msa0387580 AT3G25620.2 28.471 569 365 15 560 1101 50 603 9.48e-57 209
Msa0387580 AT3G25620.2 23.515 421 289 12 37 439 198 603 2.34e-20 97.8
Msa0387580 AT5G06530.2 26.773 564 360 13 570 1101 151 693 4.79e-54 203
Msa0387580 AT5G06530.2 24.091 440 285 15 30 439 273 693 6.87e-21 99.8
Msa0387580 AT5G06530.1 26.773 564 360 13 570 1101 151 693 4.79e-54 203
Msa0387580 AT5G06530.1 24.091 440 285 15 30 439 273 693 6.87e-21 99.8
Msa0387580 AT3G55090.1 23.748 619 409 12 550 1126 53 650 4.93e-54 202
Msa0387580 AT3G55090.1 20.670 537 369 8 26 511 197 727 4.70e-21 100
Msa0387580 AT4G27420.1 28.747 487 302 11 572 1035 33 497 3.99e-53 198
Msa0387580 AT4G27420.1 26.801 347 225 11 39 374 170 498 1.33e-21 101
Msa0387580 AT5G06530.3 26.825 548 350 12 570 1085 151 679 1.80e-52 197
Msa0387580 AT5G06530.3 23.855 415 270 13 39 423 281 679 7.18e-20 96.3
Msa0387580 AT3G55130.1 24.607 573 393 9 573 1117 70 631 4.77e-52 196
Msa0387580 AT3G55130.1 22.489 458 311 12 26 455 190 631 2.34e-25 114
Msa0387580 AT1G53270.1 28.039 510 338 10 597 1101 44 529 7.60e-52 193
Msa0387580 AT1G53270.1 23.077 429 280 8 39 453 151 543 5.32e-22 102
Msa0387580 AT2G37360.1 25.926 621 411 13 527 1114 54 658 2.57e-51 195
Msa0387580 AT2G37360.1 20.181 441 335 5 26 453 223 659 1.10e-23 108
Msa0387580 AT3G21090.1 27.031 640 382 18 545 1141 1 598 1.64e-50 191
Msa0387580 AT3G21090.1 25.599 543 358 16 27 541 135 659 7.87e-31 130
Msa0387580 AT5G13580.1 24.016 737 469 17 520 1177 2 726 5.30e-50 190
Msa0387580 AT5G13580.1 21.508 451 318 6 26 455 198 633 5.86e-19 93.2
Msa0387580 AT1G31770.1 25.000 576 390 12 546 1101 23 576 6.28e-50 189
Msa0387580 AT1G31770.1 23.981 417 283 11 37 439 180 576 4.04e-22 103
Msa0387580 AT3G25620.1 32.029 409 243 13 560 941 50 450 1.39e-49 184
Msa0387580 AT3G25620.1 35.762 151 89 6 37 182 198 345 1.23e-17 87.8
Msa0387580 AT3G13220.1 26.908 524 340 12 602 1101 105 609 2.20e-49 188
Msa0387580 AT3G13220.1 31.783 129 85 3 26 153 194 320 1.39e-12 72.8
Msa0387580 AT3G55100.1 24.253 569 396 10 569 1117 15 568 4.78e-49 186
Msa0387580 AT3G55100.1 21.252 527 360 10 26 511 141 653 3.60e-24 109
Msa0387580 AT3G55100.2 24.253 569 396 10 569 1117 15 568 4.78e-49 186
Msa0387580 AT3G55100.2 21.252 527 360 10 26 511 141 653 3.60e-24 109
Msa0387580 AT2G39350.1 22.630 654 441 11 520 1117 2 646 1.14e-48 186
Msa0387580 AT2G39350.1 21.806 454 325 4 26 455 199 646 1.44e-25 114
Msa0387580 AT5G06530.4 26.707 498 319 10 620 1085 1 484 1.38e-48 181
Msa0387580 AT5G06530.4 23.855 415 270 13 39 423 86 484 2.19e-20 96.7
Msa0387580 AT3G55110.1 23.684 570 395 10 573 1117 60 614 1.91e-48 185
Msa0387580 AT3G55110.1 22.406 424 310 8 43 455 199 614 1.65e-26 117
Msa0387580 AT3G53510.1 25.719 626 401 12 603 1177 126 738 2.86e-48 185
Msa0387580 AT3G53510.1 21.882 425 308 5 43 455 233 645 7.95e-22 102
Msa0387580 AT2G01320.7 29.519 437 281 10 603 1025 90 513 2.90e-48 181
Msa0387580 AT2G01320.7 27.887 355 236 9 25 372 181 522 1.90e-24 109
Msa0387580 AT2G01320.6 29.519 437 281 10 603 1025 90 513 2.90e-48 181
Msa0387580 AT2G01320.6 27.887 355 236 9 25 372 181 522 1.90e-24 109
Msa0387580 AT1G53390.1 36.122 263 157 4 584 846 509 760 3.77e-48 188
Msa0387580 AT1G53390.1 33.557 149 95 4 27 173 614 760 4.51e-15 81.3
Msa0387580 AT1G71960.1 27.976 504 300 13 551 1012 15 497 7.79e-48 182
Msa0387580 AT1G71960.1 23.944 426 281 14 37 443 183 584 1.71e-20 98.2
Msa0387580 AT2G13610.1 26.190 546 363 12 597 1119 57 585 4.34e-45 174
Msa0387580 AT2G13610.1 21.694 484 341 9 43 506 165 630 4.46e-22 103
Msa0387580 AT4G25750.1 26.705 528 322 16 603 1114 30 508 1.29e-44 171
Msa0387580 AT4G25750.1 23.361 488 329 13 30 511 120 568 1.49e-25 113
Msa0387580 AT1G51500.1 26.460 548 354 13 602 1119 43 571 1.35e-43 170
Msa0387580 AT1G51500.1 25.670 448 306 9 27 454 134 574 1.53e-28 123
Msa0387580 AT1G17840.1 26.716 539 344 13 597 1100 63 585 2.00e-43 170
Msa0387580 AT1G17840.1 25.227 440 288 14 27 443 160 581 2.96e-25 113
Msa0387580 AT2G37010.2 33.716 261 167 3 602 862 499 753 8.76e-43 171
Msa0387580 AT2G37010.2 32.824 131 86 2 34 163 598 727 9.82e-15 80.1
Msa0387580 AT2G37010.1 33.716 261 167 3 602 862 499 753 8.76e-43 171
Msa0387580 AT2G37010.1 32.824 131 86 2 34 163 598 727 9.82e-15 80.1
Msa0387580 AT5G52860.1 27.027 518 331 15 603 1114 44 520 1.33e-41 162
Msa0387580 AT5G52860.1 22.200 500 344 11 19 511 119 580 5.90e-27 118
Msa0387580 AT5G60740.1 36.508 252 151 3 595 846 510 752 8.90e-40 161
Msa0387580 AT5G60740.1 38.406 138 81 4 34 169 613 748 1.02e-12 73.6
Msa0387580 AT1G51460.1 25.084 594 366 14 602 1143 29 595 2.00e-37 151
Msa0387580 AT1G51460.1 24.459 462 316 10 27 461 120 575 2.58e-20 97.4
Msa0387580 AT5G19410.2 25.524 525 347 16 603 1114 75 568 4.87e-36 146
Msa0387580 AT5G19410.2 23.750 480 318 11 37 506 178 619 6.05e-28 121
Msa0387580 AT5G19410.1 25.524 525 347 16 603 1114 66 559 6.76e-36 145
Msa0387580 AT5G19410.1 23.750 480 318 11 37 506 169 610 9.85e-28 120
Msa0387580 AT2G28070.2 21.617 569 379 16 586 1117 118 656 3.38e-22 103
Msa0387580 AT2G28070.2 22.551 439 321 9 30 456 225 656 8.13e-13 73.6
Msa0387580 AT2G28070.1 21.617 569 379 16 586 1117 118 656 3.38e-22 103
Msa0387580 AT2G28070.1 22.551 439 321 9 30 456 225 656 8.13e-13 73.6
Msa0387580 AT5G61700.2 26.316 171 114 4 618 785 630 791 4.22e-11 67.8
Msa0387580 AT5G61700.4 26.316 171 114 4 618 785 630 791 4.22e-11 67.8

Find 242 sgRNAs with CRISPR-Local

Find 533 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATTCTTGAAACAAAATT+TGG 0.112664 3_1:-91581898 Msa0387580:CDS
CGACAATTCTTGGCATTATT+TGG 0.129199 3_1:-91588685 Msa0387580:CDS
TTCAAATTGGAAACTATTTA+AGG 0.150151 3_1:-91589200 Msa0387580:CDS
TCTCTGGTGCCGACTGTAAA+AGG 0.165317 3_1:+91589557 None:intergenic
TCAATTCTTGTGTCTGTATT+TGG 0.174535 3_1:+91588149 None:intergenic
CGTTACCCATATGGATTCTT+AGG 0.183986 3_1:-91588895 Msa0387580:CDS
TTTGGATGTGAATAGGTTTC+TGG 0.202465 3_1:-91590552 None:intergenic
TATCATTCAGTCTAATATTT+TGG 0.207149 3_1:-91583142 Msa0387580:CDS
CATTAATTGCTATGGCATTC+TGG 0.233682 3_1:+91588353 None:intergenic
ACAAGATCTACTAAATCTTT+TGG 0.234894 3_1:-91582971 Msa0387580:CDS
CACCTAGTTGTGAGGTTATA+AGG 0.241811 3_1:+91581970 None:intergenic
ATGAAGGCTATTGCATTATC+AGG 0.268066 3_1:-91590306 Msa0387580:CDS
GTATTGTTGTTGATCTTTCT+TGG 0.273892 3_1:+91589384 None:intergenic
CCATTCCTCTTCTCGATTCA+TGG 0.274451 3_1:+91585079 None:intergenic
ACATCAAGCCATGGATGATA+TGG 0.276467 3_1:-91588405 Msa0387580:CDS
AAGTACAACTCCTTCGAATT+TGG 0.279548 3_1:+91583290 None:intergenic
TTAAGCTGATATACATGATT+TGG 0.286705 3_1:+91581750 None:intergenic
GATGCTCTTGTGGGACTTCC+TGG 0.287643 3_1:-91584077 Msa0387580:CDS
CGACCTTCTTTATGACTCTT+TGG 0.290161 3_1:-91582303 Msa0387580:CDS
GAGGAATCAAGAACTTATTA+AGG 0.291143 3_1:-91583330 Msa0387580:CDS
CCCATTGCATGGACACTATA+TGG 0.293555 3_1:-91581993 Msa0387580:CDS
GCTTGTTTACAGAAGATTAT+TGG 0.295339 3_1:-91588088 Msa0387580:CDS
CGAATGTTTCTTGATTCTTT+TGG 0.296151 3_1:+91584363 None:intergenic
GGAAGGCGGCGAACTTCTTA+TGG 0.297790 3_1:-91582423 Msa0387580:CDS
AGATGGCTCTTTCTTTATTT+CGG 0.300502 3_1:-91588654 Msa0387580:CDS
GGTAGATCACATACCGTCTT+AGG 0.307000 3_1:+91582256 None:intergenic
TCTTCGAATACACGGGCTTT+AGG 0.307030 3_1:-91589453 Msa0387580:CDS
TTCTTTCATTCATTTCATAT+TGG 0.308280 3_1:-91589307 Msa0387580:CDS
GAAGGAAATATTAGCATATC+AGG 0.317562 3_1:-91584389 Msa0387580:CDS
GAGACAAATGGTTCATATAA+TGG 0.319440 3_1:-91589599 Msa0387580:CDS
TGAAAGAAATCAACAAATTC+AGG 0.320369 3_1:+91589322 None:intergenic
TTTATGTACTTCAAATTGTT+TGG 0.326721 3_1:-91582376 Msa0387580:CDS
CTAATCCTTTACTCCATGAT+TGG 0.327904 3_1:-91582454 Msa0387580:CDS
GTTCGCAGTAACCACTAATT+CGG 0.334646 3_1:+91584339 None:intergenic
GCATTCTGGCCATACATTAT+AGG 0.336967 3_1:+91588367 None:intergenic
TGGGTTTGACTCTTATTATA+AGG 0.340252 3_1:+91589256 None:intergenic
TATGGTGGAGATGGTACTAT+TGG 0.341651 3_1:-91582022 Msa0387580:CDS
CCATATCGCTGATTCCAAAA+AGG 0.345613 3_1:+91588862 None:intergenic
GGATATTTGTGCTGACATTA+TGG 0.351755 3_1:-91589898 Msa0387580:CDS
TAACCCTTCAATCATCTTCA+TGG 0.356026 3_1:-91583994 Msa0387580:CDS
AACTATCCATGACAGTTTCT+AGG 0.358119 3_1:-91588973 Msa0387580:CDS
GGAAACAAAATCTGTCCTAT+TGG 0.358578 3_1:-91583217 Msa0387580:CDS
TTACAGAAGATTATTGGTAT+TGG 0.359125 3_1:-91588082 Msa0387580:CDS
CGATTCATGGTTAGATGAAC+TGG 0.360269 3_1:+91585092 None:intergenic
AACATAATCAGTTACAAAAC+TGG 0.372132 3_1:+91590275 None:intergenic
GACAATGAATTTGAAACAAC+TGG 0.373261 3_1:+91588607 None:intergenic
ACAAGTGCTGTTAATATTCC+TGG 0.375367 3_1:+91584482 None:intergenic
GTAAAGGATTAGTGTGTAAA+TGG 0.376075 3_1:+91582465 None:intergenic
TTCAATACAAAGCTAACTTC+TGG 0.376854 3_1:-91583238 Msa0387580:CDS
GGGCATTTGCGTTACCCATA+TGG 0.377368 3_1:-91588904 Msa0387580:CDS
GGAACTGAAACATATCTATA+AGG 0.384650 3_1:+91589343 None:intergenic
TTGCTGTTGCTCATATAGGC+TGG 0.384741 3_1:-91581848 Msa0387580:CDS
ATCTGCATTGGAGCCTTGAT+TGG 0.387779 3_1:-91588059 Msa0387580:CDS
GGAAATTGCGGCAGAGCTTA+AGG 0.388812 3_1:-91589281 Msa0387580:CDS
ACCGTTTCAACCACTTTCAA+TGG 0.392548 3_1:-91585052 Msa0387580:CDS
TGATACAGCAAATACCTATA+TGG 0.392550 3_1:-91582040 Msa0387580:intron
ATGAATTCTTAGACAAAAGA+TGG 0.392823 3_1:-91588333 Msa0387580:CDS
GAAACATTCGCCCGAATTAG+TGG 0.395245 3_1:-91584350 Msa0387580:CDS
TCTGCATTATCCTATGCATT+TGG 0.399413 3_1:-91582835 Msa0387580:CDS
TTGGATGTGAATAGGTTTCT+GGG 0.401394 3_1:-91590551 None:intergenic
AGTTCCATGCTTCCAGCTCC+TGG 0.403220 3_1:+91581924 None:intergenic
GAATTCTTGAAACAAAATTT+GGG 0.403642 3_1:-91581897 Msa0387580:CDS
CTTGTAGGTGTTAGTGGTGC+TGG 0.406801 3_1:-91584464 Msa0387580:CDS
CAAGTTGCTGTTGCTCATAT+AGG 0.408915 3_1:-91581852 Msa0387580:CDS
ACTTAGTATTGCTGTGGAAT+TGG 0.412497 3_1:-91584021 Msa0387580:CDS
ACTCTTTGGAACTTGTTCTC+TGG 0.416623 3_1:-91582289 Msa0387580:CDS
TCAAGAAGGGAGAGAGAAGC+TGG 0.419774 3_1:-91590360 Msa0387580:CDS
AATGATTGAGAATATTTGGT+TGG 0.425570 3_1:+91583266 None:intergenic
TCATCATGTTGTCTAGGTGT+TGG 0.427705 3_1:-91590411 Msa0387580:five_prime_UTR
AGAAAGATCAACAACAATAC+TGG 0.428448 3_1:-91589381 Msa0387580:CDS
ACAGCACTTGTAGGTGTTAG+TGG 0.428551 3_1:-91584470 Msa0387580:CDS
AGGGATCCTAAGAATCCATA+TGG 0.434877 3_1:+91588889 None:intergenic
ACCAGCAAAAGTACTGTTCA+TGG 0.436769 3_1:-91589677 Msa0387580:CDS
AGCTGGAAGCATGGAACTAA+AGG 0.437969 3_1:-91581919 Msa0387580:CDS
TTCATGAAAGCATCAATCTC+AGG 0.440852 3_1:+91590324 None:intergenic
ACTCCATGATTGGGTTTGAA+TGG 0.442009 3_1:-91582444 Msa0387580:CDS
AATGTCATGCTGACTAATAT+AGG 0.443065 3_1:+91590473 None:intergenic
GAACTTGCATATTTCAAAAG+TGG 0.445415 3_1:+91589624 None:intergenic
GATGTTTGTTGAAGAAGTTA+TGG 0.447553 3_1:-91584126 Msa0387580:CDS
TTTGTAGTGGTATTTGTGCT+AGG 0.448154 3_1:-91588574 Msa0387580:CDS
TTCATGGATGAAATATCAAC+AGG 0.448370 3_1:-91589661 Msa0387580:CDS
GTGAGAAATACAGTAGATAC+AGG 0.452056 3_1:-91583918 Msa0387580:CDS
TTCTATCGGGAAAGAGCAGC+AGG 0.454418 3_1:-91582865 Msa0387580:CDS
TATATATCTCCTATAATGTA+TGG 0.458421 3_1:-91588376 Msa0387580:CDS
TGGCTAAGGTCATGAGAAAT+CGG 0.458914 3_1:+91583171 None:intergenic
ATGATAAATGTGATGTTCAA+TGG 0.459840 3_1:-91589004 Msa0387580:CDS
CATAAAGAAGGTCGTAGAAA+TGG 0.461515 3_1:+91582312 None:intergenic
ATGATTGAGAATATTTGGTT+GGG 0.462037 3_1:+91583267 None:intergenic
GGAATATTAACAGCACTTGT+AGG 0.462486 3_1:-91584479 Msa0387580:CDS
CATCAAGCCATGGATGATAT+GGG 0.465370 3_1:-91588404 Msa0387580:CDS
TGCTGTTGCTCATATAGGCT+GGG 0.467609 3_1:-91581847 Msa0387580:CDS
GTGGGACTTCCTGGTGTGGA+TGG 0.468326 3_1:-91584068 Msa0387580:CDS
TTCGCAGTAACCACTAATTC+GGG 0.469348 3_1:+91584340 None:intergenic
TAATCCTTTACTCCATGATT+GGG 0.470968 3_1:-91582453 Msa0387580:CDS
TATTGGTATTGGATCTGCAT+TGG 0.472608 3_1:-91588071 Msa0387580:CDS
CACAAACTTCAGGCTATCTC+AGG 0.473293 3_1:-91583570 Msa0387580:intron
TTATATTGTTAACAGGTGCT+TGG 0.474543 3_1:-91589924 Msa0387580:intron
TTTCACTAATGCAGCTGGGT+GGG 0.476729 3_1:+91589237 None:intergenic
ACAAAAGATACAAACCTTCA+AGG 0.477377 3_1:+91585427 None:intergenic
TAAGAATTCATTAATTGCTA+TGG 0.477715 3_1:+91588345 None:intergenic
GAAGGTCAAATTGTATATCA+AGG 0.479492 3_1:-91589499 Msa0387580:CDS
CAAAAGATACAAACCTTCAA+GGG 0.479569 3_1:+91585428 None:intergenic
ATGGTGGAGATGGTACTATT+GGG 0.479665 3_1:-91582021 Msa0387580:CDS
CCATATAGTGTCCATGCAAT+GGG 0.480313 3_1:+91581993 None:intergenic
AGTCAGCATGACATTCACTA+TGG 0.480671 3_1:-91590465 Msa0387580:five_prime_UTR
GTTCTTGCAATAGAAACAAC+TGG 0.480838 3_1:+91582892 None:intergenic
TAGTACCATCTCCACCATAT+AGG 0.481162 3_1:+91582026 None:intergenic
CAACTACTACATGATGTTAG+TGG 0.482644 3_1:-91584515 Msa0387580:CDS
TTGTTAACAGGTGCTTGGAT+TGG 0.483224 3_1:-91589919 Msa0387580:intron
GGATGAAATATCAACAGGAT+TGG 0.484626 3_1:-91589656 Msa0387580:CDS
CACAAGGTATGAACTGTTGA+TGG 0.484897 3_1:-91590388 Msa0387580:exon
CAAAAGAAGCGATTAACAAC+AGG 0.487095 3_1:-91589840 Msa0387580:intron
AACTCCTTCGAATTTGGTGC+TGG 0.491302 3_1:+91583296 None:intergenic
ACACTCATGGATGTATTAGC+TGG 0.491439 3_1:-91584434 Msa0387580:CDS
GGTTCGCTCCTTCTGCTAGC+AGG 0.492689 3_1:-91588814 Msa0387580:intron
ATCTTCTGTAAACAAGCCTC+TGG 0.493833 3_1:+91588094 None:intergenic
GCCATTGAAAGTGGTTGAAA+CGG 0.495122 3_1:+91585051 None:intergenic
GCCATATAGTGTCCATGCAA+TGG 0.495949 3_1:+91581992 None:intergenic
CAAACCCAATCATGGAGTAA+AGG 0.497078 3_1:+91582449 None:intergenic
ATTATCCTATGCATTTGGTC+AGG 0.497149 3_1:-91582830 Msa0387580:intron
TGATAAATGTGATGTTCAAT+GGG 0.497337 3_1:-91589003 Msa0387580:CDS
CAGGAAAAGCTTACTGGTAA+AGG 0.498211 3_1:+91583433 None:intergenic
TTTCGGTTCGTTGCTGCAGT+TGG 0.498360 3_1:-91588637 Msa0387580:CDS
ATTATTTGGCATTCATCAGA+TGG 0.499641 3_1:-91588671 Msa0387580:CDS
GTATTGAGAATGTCTCCAAT+AGG 0.500471 3_1:+91583202 None:intergenic
AAAGCATCAATCTCAGGGTC+TGG 0.501054 3_1:+91590330 None:intergenic
ATGCAAGTTCATGAGACAAA+TGG 0.501939 3_1:-91589611 Msa0387580:CDS
TGTAACTGATTATGTTCTCA+AGG 0.505506 3_1:-91590268 Msa0387580:intron
ACTTCAAGCATCCATGTGGC+TGG 0.506884 3_1:+91583519 None:intergenic
TTTCTCATGACCTTAGCCAT+TGG 0.507382 3_1:-91583167 Msa0387580:CDS
GAGAAGAGAAAATCCAATCA+AGG 0.509995 3_1:+91588046 None:intergenic
TTTCTTTCACTAATGCAGCT+GGG 0.511629 3_1:+91589233 None:intergenic
GTTAGTGGTGCTTTCAGACC+AGG 0.512131 3_1:-91584500 Msa0387580:CDS
GTCTATGTTGATCTTTGTAG+TGG 0.512990 3_1:-91588587 Msa0387580:CDS
TCAATGAGAGGATGAAGAGA+AGG 0.514001 3_1:+91588018 None:intergenic
GAAATGAGAAGAGGTATCTC+CGG 0.514328 3_1:-91589867 Msa0387580:CDS
TCATCCATGAAGATGATTGA+AGG 0.514820 3_1:+91583990 None:intergenic
AAAACTGGTGGATACATTGA+AGG 0.515079 3_1:-91584407 Msa0387580:CDS
GCACTTAGAGATGCTCTTGT+GGG 0.516338 3_1:-91584086 Msa0387580:CDS
CATGATTGGGTTTGAATGGA+AGG 0.519186 3_1:-91582440 Msa0387580:CDS
CCATCTTGAACAGTACCAAC+CGG 0.522124 3_1:+91589058 None:intergenic
TTCATGGATGAACCAACATC+AGG 0.524160 3_1:-91583978 Msa0387580:CDS
CTCTGGTGCCGACTGTAAAA+GGG 0.525002 3_1:+91589558 None:intergenic
GTTTGTTTCTTTACATCTGA+AGG 0.526340 3_1:+91584248 None:intergenic
AGAATTGATGCACCGACAGT+TGG 0.527068 3_1:-91588134 Msa0387580:CDS
CTTCCATTCAAACCCAATCA+TGG 0.527496 3_1:+91582441 None:intergenic
TGAGTGGCGATCAAGAGGTC+CGG 0.535581 3_1:+91583701 None:intergenic
TTGTAGGTGTTAGTGGTGCT+GGG 0.539685 3_1:-91584463 Msa0387580:CDS
GGTAACGCAAATGCCCATGC+AGG 0.540430 3_1:+91588911 None:intergenic
AGTTGTTTCTATTGCAAGAA+CGG 0.543696 3_1:-91582890 Msa0387580:CDS
CTTTCACTAATGCAGCTGGG+TGG 0.545339 3_1:+91589236 None:intergenic
TGGCTTTCTCATTCCTAAGA+CGG 0.546750 3_1:-91582269 Msa0387580:intron
AATAGAAACAACTGGTTGCA+CGG 0.547452 3_1:+91582900 None:intergenic
AGCACTTAGAGATGCTCTTG+TGG 0.548525 3_1:-91584087 Msa0387580:CDS
ACCTGTGTTCTACAAACAAA+GGG 0.550242 3_1:-91588948 Msa0387580:CDS
GACATTATTCTACTTTCAGA+AGG 0.551169 3_1:-91589517 Msa0387580:CDS
GAAATAGTGATACCAGGAGC+TGG 0.551466 3_1:-91581936 Msa0387580:CDS
GGAGGTTTCATTATTGCCAA+AGG 0.552724 3_1:-91588553 Msa0387580:intron
ATTGGGCTTCTCCCATTGCA+TGG 0.553135 3_1:-91582004 Msa0387580:CDS
AAAAGCTTACTGGTAAAGGT+TGG 0.553851 3_1:+91583437 None:intergenic
TTACTGGTAAAGGTTGGAGT+TGG 0.559316 3_1:+91583443 None:intergenic
GAATGATACTCCAATGGCTA+AGG 0.559848 3_1:+91583157 None:intergenic
CAGCTATTGCTGATGAAAAG+AGG 0.560051 3_1:-91583741 Msa0387580:CDS
GGAGGACAAGTTATCTATGC+CGG 0.563477 3_1:-91583720 Msa0387580:CDS
GTTCCAAAGAGTCATAAAGA+AGG 0.566221 3_1:+91582300 None:intergenic
TATCAGGAAATGAAGAGTCA+TGG 0.566652 3_1:-91584557 Msa0387580:intron
AGGAATGGCTTCTTATGAAG+AGG 0.567730 3_1:-91589165 Msa0387580:CDS
CATCCATGAAGATGATTGAA+GGG 0.567755 3_1:+91583991 None:intergenic
AAATACCTATATGGTGGAGA+TGG 0.568001 3_1:-91582031 Msa0387580:CDS
TGTTGATGGAACTCTCAAGA+AGG 0.572173 3_1:-91590374 Msa0387580:exon
ATGGCGGCAACATCGAGGCT+TGG 0.573131 3_1:+91582331 None:intergenic
TAATAGCCCCATATCATCCA+TGG 0.574695 3_1:+91588397 None:intergenic
ATTCTACAAGCTTGTGTGAG+TGG 0.575486 3_1:+91583685 None:intergenic
TCCCTTTGTTTGTAGAACAC+AGG 0.576798 3_1:+91588947 None:intergenic
TGAGATTGATGCTTTCATGA+AGG 0.576939 3_1:-91590322 Msa0387580:CDS
TAGCAGCGGCTCTAGCATCA+AGG 0.577275 3_1:+91583955 None:intergenic
AAATACAGTGAGAGAGACGT+TGG 0.578637 3_1:-91590439 Msa0387580:five_prime_UTR
CCATGAATCGAGAAGAGGAA+TGG 0.582957 3_1:-91585079 Msa0387580:CDS
TACCTGTGTTCTACAAACAA+AGG 0.583545 3_1:-91588949 Msa0387580:CDS
ACTTGATGTAGGGGAGATGC+TGG 0.583808 3_1:-91589704 Msa0387580:intron
CCGGTTGGTACTGTTCAAGA+TGG 0.584336 3_1:-91589058 Msa0387580:CDS
GATACCAGGAGCTGGAAGCA+TGG 0.585002 3_1:-91581928 Msa0387580:CDS
CTAGCATCAAGGCCTGATGT+TGG 0.585455 3_1:+91583966 None:intergenic
TCATATTACCTGCTAGCAGA+AGG 0.585633 3_1:+91588806 None:intergenic
TGTTGAAGAAGTTATGGAGT+TGG 0.589528 3_1:-91584120 Msa0387580:CDS
GTAGTGGTATTTGTGCTAGG+AGG 0.589574 3_1:-91588571 Msa0387580:CDS
TTGTGTGAGTGGCGATCAAG+AGG 0.589978 3_1:+91583696 None:intergenic
TGATTGAATGCCATTGAAAG+TGG 0.595744 3_1:+91585042 None:intergenic
CTGTAAAAGGGAAATGACTA+CGG 0.598590 3_1:+91589570 None:intergenic
TCTAACCATGAATCGAGAAG+AGG 0.600171 3_1:-91585084 Msa0387580:CDS
TTATACCTGACCAAATGCAT+AGG 0.602658 3_1:+91582825 None:intergenic
TACTCCAGCACCAAATTCGA+AGG 0.604588 3_1:-91583300 Msa0387580:CDS
GCTAGAGTTCTTCGAATACA+CGG 0.605113 3_1:-91589461 Msa0387580:CDS
GAAGAGACTTAGTATTGCTG+TGG 0.605676 3_1:-91584027 Msa0387580:CDS
GTTGATGGAACTCTCAAGAA+GGG 0.605900 3_1:-91590373 Msa0387580:exon
AAATGTGATGTTCAATGGGA+TGG 0.606208 3_1:-91588999 Msa0387580:CDS
TGTAAAGAAACAAACTCGAA+AGG 0.606793 3_1:-91584240 Msa0387580:intron
CTAGAGTTCTTCGAATACAC+GGG 0.606884 3_1:-91589460 Msa0387580:CDS
GTTGTCTAGGTGTTGGCACA+AGG 0.607623 3_1:-91590404 Msa0387580:five_prime_UTR
GGCCTTATAACCTCACAACT+AGG 0.607702 3_1:-91581972 Msa0387580:CDS
TCATTCATTTCATATTGGAG+AGG 0.608375 3_1:-91589302 Msa0387580:CDS
GGGATCCTAAGAATCCATAT+GGG 0.610202 3_1:+91588890 None:intergenic
TGTATCTACTGTATTTCTCA+CGG 0.610416 3_1:+91583920 None:intergenic
TCATGAAAGCATCAATCTCA+GGG 0.611851 3_1:+91590325 None:intergenic
ATTTGTGCTGACATTATGGT+AGG 0.612696 3_1:-91589894 Msa0387580:CDS
GATGAAGATGACAAGAACAA+TGG 0.613698 3_1:-91585474 Msa0387580:CDS
GATGTAGGGGAGATGCTGGT+AGG 0.617885 3_1:-91589700 Msa0387580:intron
TAGACTGAATGATACTCCAA+TGG 0.620231 3_1:+91583151 None:intergenic
ATGCAAACACAAATGCAAAG+AGG 0.626053 3_1:+91581820 None:intergenic
GTTGATAGACCATCCACACC+AGG 0.630596 3_1:+91584059 None:intergenic
TACAGCAAATACCTATATGG+TGG 0.633094 3_1:-91582037 Msa0387580:intron
AAAAGATACAAACCTTCAAG+GGG 0.633579 3_1:+91585429 None:intergenic
AGGTAGCCTAGAAACTGTCA+TGG 0.636166 3_1:+91588967 None:intergenic
TCTTGTGGGACTTCCTGGTG+TGG 0.636203 3_1:-91584072 Msa0387580:CDS
GAAGAGTCATGGAATGAACA+AGG 0.640270 3_1:-91584546 Msa0387580:CDS
ATATGAGCAACAGCAACTTG+AGG 0.642508 3_1:+91581855 None:intergenic
GTAGGTGATGAAATGAGAAG+AGG 0.644592 3_1:-91589876 Msa0387580:CDS
ATCAAGCCATGGATGATATG+GGG 0.644621 3_1:-91588403 Msa0387580:CDS
GATTCAAATAAGTCAATGAG+AGG 0.647301 3_1:+91588006 None:intergenic
ATGGTTATAATCCAGCCACA+TGG 0.650103 3_1:-91583530 Msa0387580:CDS
AATACAGAAATAGTGATACC+AGG 0.650365 3_1:-91581942 Msa0387580:CDS
TGCTGGGAAGACAACACTCA+TGG 0.650421 3_1:-91584447 Msa0387580:CDS
AAAGAAGGTCGTAGAAATGG+CGG 0.651076 3_1:+91582315 None:intergenic
TGGAGACATTCTCAATACAA+TGG 0.652813 3_1:-91583197 Msa0387580:CDS
GTAACGCAAATGCCCATGCA+GGG 0.656836 3_1:+91588912 None:intergenic
GATTGGGTTTGAATGGAAGG+CGG 0.665897 3_1:-91582437 Msa0387580:CDS
ATGAGAAGAGGTATCTCCGG+AGG 0.670522 3_1:-91589864 Msa0387580:CDS
GAGCCGCTGCTATCGTTATG+CGG 0.670901 3_1:-91583944 Msa0387580:CDS
ATGGTCTATCAACAGAACAA+AGG 0.674008 3_1:-91584049 Msa0387580:CDS
TCTGGGAAAATAACTTACTG+CGG 0.674740 3_1:-91590534 Msa0387580:five_prime_UTR
TCATATTGGAGAGGAAATTG+CGG 0.675789 3_1:-91589293 Msa0387580:CDS
AAAGTACTTCTCAAAGCCAG+AGG 0.677875 3_1:-91588110 Msa0387580:CDS
TAGAAATGGCGGCAACATCG+AGG 0.692415 3_1:+91582326 None:intergenic
CTATTGCTGATGAAAAGAGG+AGG 0.696092 3_1:-91583738 Msa0387580:CDS
TGAGAAATACAGTAGATACA+GGG 0.699789 3_1:-91583917 Msa0387580:CDS
GGTCCGCATAACGATAGCAG+CGG 0.700617 3_1:+91583941 None:intergenic
TCTATCGGGAAAGAGCAGCA+GGG 0.704433 3_1:-91582864 Msa0387580:CDS
ACTGACTTCAAGCATCCATG+TGG 0.707005 3_1:+91583515 None:intergenic
GATTCATAGACAGTAACATG+AGG 0.707048 3_1:+91584299 None:intergenic
TTGTAGATGACATCAAGCCA+TGG 0.723693 3_1:-91588414 Msa0387580:intron
AAAGATACAAACCTTCAAGG+GGG 0.776185 3_1:+91585430 None:intergenic
TGATTCGAAAGCAGTCACTG+CGG 0.777433 3_1:-91585496 Msa0387580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATACTAATATAGTAAT+AGG + chr3_1:91582015-91582034 None:intergenic 10.0%
!!! ATCATATATTATTTTTTACA+TGG + chr3_1:91586522-91586541 None:intergenic 10.0%
!!! ATACATAAAAAAAAAGTATA+TGG + chr3_1:91589442-91589461 None:intergenic 10.0%
!! TGTTTAATATGTTAAATTGT+TGG + chr3_1:91582436-91582455 None:intergenic 15.0%
!! AAAAATATGGTATTTCAAAT+TGG - chr3_1:91583010-91583029 Msa0387580:intron 15.0%
!!! TTCTTACATATTTTACAATT+GGG - chr3_1:91583388-91583407 Msa0387580:intron 15.0%
!! ATAACAACAGTAAATAATAT+TGG + chr3_1:91583996-91584015 None:intergenic 15.0%
!! TATTTCAAAGATATGAAAAT+AGG - chr3_1:91586543-91586562 Msa0387580:intron 15.0%
!!! GTATCTTTTGTAATATATTT+CGG - chr3_1:91586808-91586827 Msa0387580:intron 15.0%
!! TCTTAATCATAAATAATTAG+TGG + chr3_1:91587071-91587090 None:intergenic 15.0%
!! AATTATTTATGATTAAGAAC+AGG - chr3_1:91587073-91587092 Msa0387580:intron 15.0%
!! TATATGTTTATCAAAATTGT+CGG - chr3_1:91587594-91587613 Msa0387580:intron 15.0%
!!! ATTTTTGCTTAACAAATTTT+TGG - chr3_1:91589217-91589236 Msa0387580:CDS 15.0%
!!! AAAACAAAATGAAATTTGTT+AGG + chr3_1:91589656-91589675 None:intergenic 15.0%
!!! TACTCTTTCTTTTTTAAAAT+TGG - chr3_1:91590027-91590046 Msa0387580:intron 15.0%
!!! AATCTATATGCTTCTATTTT+AGG - chr3_1:91582032-91582051 Msa0387580:CDS 20.0%
!!! ATCTATATGCTTCTATTTTA+GGG - chr3_1:91582033-91582052 Msa0387580:CDS 20.0%
!!! TTGGATTTTATATTGTTAAC+AGG - chr3_1:91582292-91582311 Msa0387580:CDS 20.0%
!! TTCTTTCATTCATTTCATAT+TGG - chr3_1:91582916-91582935 Msa0387580:CDS 20.0%
!! TTCAAATTGGAAACTATTTA+AGG - chr3_1:91583023-91583042 Msa0387580:intron 20.0%
!!! GTTCTTACATATTTTACAAT+TGG - chr3_1:91583387-91583406 Msa0387580:intron 20.0%
!! TTATCGAACTACATATATAT+AGG - chr3_1:91583448-91583467 Msa0387580:CDS 20.0%
!! TATATATCTCCTATAATGTA+TGG - chr3_1:91583847-91583866 Msa0387580:intron 20.0%
!! TAAGAATTCATTAATTGCTA+TGG + chr3_1:91583881-91583900 None:intergenic 20.0%
!! TTGTTTGTATAAGTACATTA+AGG + chr3_1:91583958-91583977 None:intergenic 20.0%
!! TACTGTTGTTATATGATATA+TGG - chr3_1:91584004-91584023 Msa0387580:CDS 20.0%
!! AATAATGCAGAAACTAATAT+CGG - chr3_1:91584281-91584300 Msa0387580:CDS 20.0%
!! AAGAAATTCCATAACTATTA+TGG + chr3_1:91584697-91584716 None:intergenic 20.0%
!!! TAATGTAATGAATTCTAGAA+GGG - chr3_1:91585823-91585842 Msa0387580:intron 20.0%
!!! TTTTATTTCGCTAGAATTTT+TGG + chr3_1:91586094-91586113 None:intergenic 20.0%
!! AATTGTCTATTTAAGCAAAT+TGG + chr3_1:91586576-91586595 None:intergenic 20.0%
!!! TATTCTGTTATTTTACTATG+TGG - chr3_1:91587260-91587279 Msa0387580:intron 20.0%
!! ATGAGATTTATCAATCTAAT+GGG - chr3_1:91587383-91587402 Msa0387580:intron 20.0%
!! ATGATAAAAGTCATAACAAT+AGG + chr3_1:91587647-91587666 None:intergenic 20.0%
!!! CTATGAATCACTATTATTTT+CGG - chr3_1:91587938-91587957 Msa0387580:intron 20.0%
!! TTGTGTATTATTTATTTCCT+TGG - chr3_1:91588418-91588437 Msa0387580:intron 20.0%
!! CAAAAATGATTGAGAATATT+TGG + chr3_1:91588964-91588983 None:intergenic 20.0%
!!! CAAATATTCTCAATCATTTT+TGG - chr3_1:91588962-91588981 Msa0387580:CDS 20.0%
!!! TATCATTCAGTCTAATATTT+TGG - chr3_1:91589081-91589100 Msa0387580:CDS 20.0%
!! TTTATGTACTTCAAATTGTT+TGG - chr3_1:91589847-91589866 Msa0387580:CDS 20.0%
!! GAATTCTTGAAACAAAATTT+GGG - chr3_1:91590326-91590345 Msa0387580:CDS 20.0%
! AACATAATCAGTTACAAAAC+TGG + chr3_1:91581951-91581970 None:intergenic 25.0%
! TTTACAAATGTGGTTATGTT+TGG + chr3_1:91582270-91582289 None:intergenic 25.0%
! ATAACCACATTTGTAAAAGT+TGG - chr3_1:91582273-91582292 Msa0387580:CDS 25.0%
!! AAATCCAACTTTTACAAATG+TGG + chr3_1:91582280-91582299 None:intergenic 25.0%
! TTCAATTGTAACTTGATGTA+GGG - chr3_1:91582509-91582528 Msa0387580:intron 25.0%
! TGAAAGAAATCAACAAATTC+AGG + chr3_1:91582904-91582923 None:intergenic 25.0%
! GCATTAGTGAAAGAAAAATA+TGG - chr3_1:91582997-91583016 Msa0387580:intron 25.0%
! ATGATAAATGTGATGTTCAA+TGG - chr3_1:91583219-91583238 Msa0387580:CDS 25.0%
! TGATAAATGTGATGTTCAAT+GGG - chr3_1:91583220-91583239 Msa0387580:CDS 25.0%
! GTAAAAGAAGTGATCAATTA+GGG + chr3_1:91583711-91583730 None:intergenic 25.0%
! TGTAAAAGAAGTGATCAATT+AGG + chr3_1:91583712-91583731 None:intergenic 25.0%
! ATGAATTCTTAGACAAAAGA+TGG - chr3_1:91583890-91583909 Msa0387580:CDS 25.0%
! TTACAGAAGATTATTGGTAT+TGG - chr3_1:91584141-91584160 Msa0387580:intron 25.0%
! ATGACAAATGTGTTAACAAA+TGG + chr3_1:91584518-91584537 None:intergenic 25.0%
! ATTGTCACAAACAACTTAAT+AGG - chr3_1:91584663-91584682 Msa0387580:intron 25.0%
! TTGTCACAAACAACTTAATA+GGG - chr3_1:91584664-91584683 Msa0387580:intron 25.0%
!! TAAGTTGACGTTGATTAAAT+AGG + chr3_1:91584880-91584899 None:intergenic 25.0%
!!! GTTGATGATATTATTGTCAT+AGG + chr3_1:91585282-91585301 None:intergenic 25.0%
!! TTTGTTGATTGAAGAATACA+AGG + chr3_1:91585401-91585420 None:intergenic 25.0%
! AAGATGTATATTGTTTGGAT+GGG + chr3_1:91585532-91585551 None:intergenic 25.0%
! AAAGATGTATATTGTTTGGA+TGG + chr3_1:91585533-91585552 None:intergenic 25.0%
! TTAGCTTACAAATAGAGATA+AGG - chr3_1:91585753-91585772 Msa0387580:intron 25.0%
! GTAATGTAATGAATTCTAGA+AGG - chr3_1:91585822-91585841 Msa0387580:intron 25.0%
!! AATGTAATGAATTCTAGAAG+GGG - chr3_1:91585824-91585843 Msa0387580:intron 25.0%
! TTTATCACTCATTCCTAAAT+CGG - chr3_1:91585965-91585984 Msa0387580:intron 25.0%
! AAGAAAAAAAACAGCAACAA+AGG - chr3_1:91586037-91586056 Msa0387580:intron 25.0%
! AGAAAAAAAACAGCAACAAA+GGG - chr3_1:91586038-91586057 Msa0387580:intron 25.0%
! GTAATTTAACTGACAACAAA+CGG - chr3_1:91586339-91586358 Msa0387580:intron 25.0%
! ATAGACAATTCTAAACCTAA+TGG - chr3_1:91586586-91586605 Msa0387580:intron 25.0%
! TAGACAATTCTAAACCTAAT+GGG - chr3_1:91586587-91586606 Msa0387580:intron 25.0%
! TTGGAACACTTAAATTTATC+TGG + chr3_1:91586941-91586960 None:intergenic 25.0%
! TTTATGATTAAGAACAGGTA+TGG - chr3_1:91587078-91587097 Msa0387580:intron 25.0%
! GATGTGACTTATTAATCTAA+TGG + chr3_1:91587343-91587362 None:intergenic 25.0%
! GATGAGATTTATCAATCTAA+TGG - chr3_1:91587382-91587401 Msa0387580:intron 25.0%
! TTCAATTATGCACCATAAAA+CGG - chr3_1:91587439-91587458 Msa0387580:intron 25.0%
!! GTTATGACTTTTATCATATC+AGG - chr3_1:91587650-91587669 Msa0387580:intron 25.0%
! ATGATTGAGAATATTTGGTT+GGG + chr3_1:91588959-91588978 None:intergenic 25.0%
! AATGATTGAGAATATTTGGT+TGG + chr3_1:91588960-91588979 None:intergenic 25.0%
!! GTTCAATTTTTCCTTATCAA+TGG - chr3_1:91589144-91589163 Msa0387580:CDS 25.0%
! AATATCAAACACCATTGATA+AGG + chr3_1:91589158-91589177 None:intergenic 25.0%
! TTAATGAAGTTCAATATGAC+TGG + chr3_1:91589185-91589204 None:intergenic 25.0%
!! ACAAGATCTACTAAATCTTT+TGG - chr3_1:91589252-91589271 Msa0387580:CDS 25.0%
!! CAAGATCTACTAAATCTTTT+GGG - chr3_1:91589253-91589272 Msa0387580:CDS 25.0%
! TTACAATCAAGAGTGAAAAA+CGG + chr3_1:91589515-91589534 None:intergenic 25.0%
!!! GTTTTCATTTCTTGTTGTTA+AGG + chr3_1:91589605-91589624 None:intergenic 25.0%
!!! CAATTTATTGATAATGCAGA+TGG - chr3_1:91589702-91589721 Msa0387580:intron 25.0%
! GGAATTCTTGAAACAAAATT+TGG - chr3_1:91590325-91590344 Msa0387580:CDS 25.0%
!! CATGTATATACTATCTTTTC+TGG + chr3_1:91590451-91590470 None:intergenic 25.0%
! TTAAGCTGATATACATGATT+TGG + chr3_1:91590476-91590495 None:intergenic 25.0%
! AATGTCATGCTGACTAATAT+AGG + chr3_1:91581753-91581772 None:intergenic 30.0%
! GATTTTTCATCATGTTGTCT+AGG - chr3_1:91581806-91581825 Msa0387580:CDS 30.0%
!!! CAGTTACAAAACTGGTTTTT+TGG + chr3_1:91581943-91581962 None:intergenic 30.0%
TGTAACTGATTATGTTCTCA+AGG - chr3_1:91581955-91581974 Msa0387580:CDS 30.0%
TTATATTGTTAACAGGTGCT+TGG - chr3_1:91582299-91582318 Msa0387580:CDS 30.0%
CTTCAATTGTAACTTGATGT+AGG - chr3_1:91582508-91582527 Msa0387580:intron 30.0%
TCAATTGTAACTTGATGTAG+GGG - chr3_1:91582510-91582529 Msa0387580:intron 30.0%
TTCATGGATGAAATATCAAC+AGG - chr3_1:91582562-91582581 Msa0387580:intron 30.0%
GAACTTGCATATTTCAAAAG+TGG + chr3_1:91582602-91582621 None:intergenic 30.0%
GAGACAAATGGTTCATATAA+TGG - chr3_1:91582624-91582643 Msa0387580:intron 30.0%
TCAAAAAGTTCAAATGTCTC+TGG + chr3_1:91582685-91582704 None:intergenic 30.0%
GACATTATTCTACTTTCAGA+AGG - chr3_1:91582706-91582725 Msa0387580:intron 30.0%
GAAGGTCAAATTGTATATCA+AGG - chr3_1:91582724-91582743 Msa0387580:intron 30.0%
! GTATTGTTGTTGATCTTTCT+TGG + chr3_1:91582842-91582861 None:intergenic 30.0%
AGAAAGATCAACAACAATAC+TGG - chr3_1:91582842-91582861 Msa0387580:CDS 30.0%
GGAACTGAAACATATCTATA+AGG + chr3_1:91582883-91582902 None:intergenic 30.0%
TCATTCATTTCATATTGGAG+AGG - chr3_1:91582921-91582940 Msa0387580:CDS 30.0%
TGGGTTTGACTCTTATTATA+AGG + chr3_1:91582970-91582989 None:intergenic 30.0%
!! ATTTAAGGCATGCTTTTCAA+AGG - chr3_1:91583038-91583057 Msa0387580:intron 30.0%
!! GTTCTTTAGAACAAAAATGC+CGG - chr3_1:91583146-91583165 Msa0387580:CDS 30.0%
CAAGATGGACAAAAATTTCA+TGG - chr3_1:91583180-91583199 Msa0387580:CDS 30.0%
!!! CAGATTTTTTCGACAATTCT+TGG - chr3_1:91583528-91583547 Msa0387580:CDS 30.0%
ATTATTTGGCATTCATCAGA+TGG - chr3_1:91583552-91583571 Msa0387580:CDS 30.0%
! AGATGGCTCTTTCTTTATTT+CGG - chr3_1:91583569-91583588 Msa0387580:intron 30.0%
! GACAATGAATTTGAAACAAC+TGG + chr3_1:91583619-91583638 None:intergenic 30.0%
! TTTTACAACACTCACTTACA+CGG - chr3_1:91583725-91583744 Msa0387580:CDS 30.0%
ACTTGTTCAAACTATAGAAG+TGG + chr3_1:91583759-91583778 None:intergenic 30.0%
TCAATTCTTGTGTCTGTATT+TGG + chr3_1:91584077-91584096 None:intergenic 30.0%
GCTTGTTTACAGAAGATTAT+TGG - chr3_1:91584135-91584154 Msa0387580:intron 30.0%
GATTCAAATAAGTCAATGAG+AGG + chr3_1:91584220-91584239 None:intergenic 30.0%
TTTCTGCATTATTCAGTTAC+AGG + chr3_1:91584274-91584293 None:intergenic 30.0%
TGAGACTATTCTAACCTTAA+TGG - chr3_1:91584337-91584356 Msa0387580:CDS 30.0%
GAGACTATTCTAACCTTAAT+GGG - chr3_1:91584338-91584357 Msa0387580:CDS 30.0%
GAATGGATATCTATCATTCT+AGG - chr3_1:91584455-91584474 Msa0387580:CDS 30.0%
GAAGTTACCAATATACTATC+AGG - chr3_1:91584563-91584582 Msa0387580:intron 30.0%
AGAGAAACCTGATAGTATAT+TGG + chr3_1:91584573-91584592 None:intergenic 30.0%
TCCATAACTATTATGGATGA+AGG + chr3_1:91584690-91584709 None:intergenic 30.0%
! AGTGAGAAAGTTGATTTACT+TGG + chr3_1:91585003-91585022 None:intergenic 30.0%
AAATCAAGAGATGAACTATG+CGG + chr3_1:91585066-91585085 None:intergenic 30.0%
GAGCAATCTTAAATGAAAAC+CGG + chr3_1:91585108-91585127 None:intergenic 30.0%
! GTATATACTTGATCTTTTGC+AGG + chr3_1:91585135-91585154 None:intergenic 30.0%
TACTTCCTCGAACATTAAAA+TGG - chr3_1:91585152-91585171 Msa0387580:intron 30.0%
!! AGTTTGAGATGAAGAACTTT+TGG + chr3_1:91585225-91585244 None:intergenic 30.0%
AGAACAAAGTGTGATTTCTT+TGG - chr3_1:91585346-91585365 Msa0387580:intron 30.0%
GATTGAAGAATACAAGGTAA+TGG + chr3_1:91585395-91585414 None:intergenic 30.0%
TTAGACGAATAGGTGTATAT+GGG + chr3_1:91585465-91585484 None:intergenic 30.0%
! TACGTTTGGAGTTGATTATA+AGG + chr3_1:91585567-91585586 None:intergenic 30.0%
TGTTGAACAAACTAGTTAGA+AGG + chr3_1:91585619-91585638 None:intergenic 30.0%
CTCTATTTGTAAGCTAACAT+AGG + chr3_1:91585750-91585769 None:intergenic 30.0%
!!! TGCTGTTTTTTTTCTTTCTC+TGG + chr3_1:91586033-91586052 None:intergenic 30.0%
TACCAAAGAAAAAACTGTAG+TGG - chr3_1:91586292-91586311 Msa0387580:intron 30.0%
!!! TTCCACTACAGTTTTTTCTT+TGG + chr3_1:91586297-91586316 None:intergenic 30.0%
! AAAGAAAAAACTGTAGTGGA+AGG - chr3_1:91586296-91586315 Msa0387580:intron 30.0%
!!! TGCAGTTCTCTTTTTTTGTT+TGG + chr3_1:91586386-91586405 None:intergenic 30.0%
ACAAAAAAAGAGAACTGCAA+AGG - chr3_1:91586387-91586406 Msa0387580:intron 30.0%
CAAAAAAAGAGAACTGCAAA+GGG - chr3_1:91586388-91586407 Msa0387580:intron 30.0%
TGTCTATTTAAGCAAATTGG+TGG + chr3_1:91586573-91586592 None:intergenic 30.0%
ACCTAATGGGATAGATTAAT+AGG - chr3_1:91586600-91586619 Msa0387580:intron 30.0%
TAAACCAAAATTTCAGCGTT+AGG - chr3_1:91586704-91586723 Msa0387580:intron 30.0%
AAAAGATACAAACCTTCAAG+GGG + chr3_1:91586797-91586816 None:intergenic 30.0%
CAAAAGATACAAACCTTCAA+GGG + chr3_1:91586798-91586817 None:intergenic 30.0%
ACAAAAGATACAAACCTTCA+AGG + chr3_1:91586799-91586818 None:intergenic 30.0%
AGAAAAAAAATAGTCGCACA+TGG - chr3_1:91587008-91587027 Msa0387580:intron 30.0%
GTAAAAAATACACTTGTGCA+TGG + chr3_1:91587321-91587340 None:intergenic 30.0%
GAAGGAAATATTAGCATATC+AGG - chr3_1:91587834-91587853 Msa0387580:intron 30.0%
! CGAATGTTTCTTGATTCTTT+TGG + chr3_1:91587863-91587882 None:intergenic 30.0%
! GTTTGTTTCTTTACATCTGA+AGG + chr3_1:91587978-91587997 None:intergenic 30.0%
TGTAAAGAAACAAACTCGAA+AGG - chr3_1:91587983-91588002 Msa0387580:intron 30.0%
! GATGTTTGTTGAAGAAGTTA+TGG - chr3_1:91588097-91588116 Msa0387580:CDS 30.0%
TGTATCTACTGTATTTCTCA+CGG + chr3_1:91588306-91588325 None:intergenic 30.0%
TGAGAAATACAGTAGATACA+GGG - chr3_1:91588306-91588325 Msa0387580:intron 30.0%
GCTTCAAAAATGTCTATACT+TGG + chr3_1:91588359-91588378 None:intergenic 30.0%
!!! CATTTTTGAAGCTTTTGATG+AGG - chr3_1:91588367-91588386 Msa0387580:CDS 30.0%
AAGTTGCATAATTACAACAC+AGG + chr3_1:91588812-91588831 None:intergenic 30.0%
! GTTTTGTCTGTACTTTCTTT+AGG - chr3_1:91588871-91588890 Msa0387580:CDS 30.0%
GAGGAATCAAGAACTTATTA+AGG - chr3_1:91588893-91588912 Msa0387580:CDS 30.0%
TTCAATACAAAGCTAACTTC+TGG - chr3_1:91588985-91589004 Msa0387580:CDS 30.0%
!! TTTGATGACTTACGTCTTTT+TGG + chr3_1:91589114-91589133 None:intergenic 30.0%
!! AGTTGTTTCTATTGCAAGAA+CGG - chr3_1:91589333-91589352 Msa0387580:CDS 30.0%
! GTAAAGGATTAGTGTGTAAA+TGG + chr3_1:91589761-91589780 None:intergenic 30.0%
TAATCCTTTACTCCATGATT+GGG - chr3_1:91589770-91589789 Msa0387580:intron 30.0%
TGATACAGCAAATACCTATA+TGG - chr3_1:91590183-91590202 Msa0387580:intron 30.0%
AATACAGAAATAGTGATACC+AGG - chr3_1:91590281-91590300 Msa0387580:CDS 30.0%
TCTGGGAAAATAACTTACTG+CGG - chr3_1:91581689-91581708 Msa0387580:three_prime_UTR 35.0%
!! TCATGAAAGCATCAATCTCA+GGG + chr3_1:91581901-91581920 None:intergenic 35.0%
!! TTCATGAAAGCATCAATCTC+AGG + chr3_1:91581902-91581921 None:intergenic 35.0%
TGAGATTGATGCTTTCATGA+AGG - chr3_1:91581901-91581920 Msa0387580:CDS 35.0%
ATGAAGGCTATTGCATTATC+AGG - chr3_1:91581917-91581936 Msa0387580:CDS 35.0%
ACTTAATTGAGCTTATCTCC+TGG - chr3_1:91582068-91582087 Msa0387580:intron 35.0%
! GGATATTTGTGCTGACATTA+TGG - chr3_1:91582325-91582344 Msa0387580:CDS 35.0%
! ATTTGTGCTGACATTATGGT+AGG - chr3_1:91582329-91582348 Msa0387580:CDS 35.0%
CAAAAGAAGCGATTAACAAC+AGG - chr3_1:91582383-91582402 Msa0387580:CDS 35.0%
GGATGAAATATCAACAGGAT+TGG - chr3_1:91582567-91582586 Msa0387580:intron 35.0%
ATGCAAGTTCATGAGACAAA+TGG - chr3_1:91582612-91582631 Msa0387580:intron 35.0%
CTGTAAAAGGGAAATGACTA+CGG + chr3_1:91582656-91582675 None:intergenic 35.0%
! AGTCATTTCCCTTTTACAGT+CGG - chr3_1:91582657-91582676 Msa0387580:intron 35.0%
TCATATTGGAGAGGAAATTG+CGG - chr3_1:91582930-91582949 Msa0387580:CDS 35.0%
TTTCTTTCACTAATGCAGCT+GGG + chr3_1:91582993-91583012 None:intergenic 35.0%
! TTTTCTTTCACTAATGCAGC+TGG + chr3_1:91582994-91583013 None:intergenic 35.0%
! TTTAGAACAAAAATGCCGGT+TGG - chr3_1:91583150-91583169 Msa0387580:CDS 35.0%
AAATGTGATGTTCAATGGGA+TGG - chr3_1:91583224-91583243 Msa0387580:CDS 35.0%
AACTATCCATGACAGTTTCT+AGG - chr3_1:91583250-91583269 Msa0387580:CDS 35.0%
TACCTGTGTTCTACAAACAA+AGG - chr3_1:91583274-91583293 Msa0387580:CDS 35.0%
ACCTGTGTTCTACAAACAAA+GGG - chr3_1:91583275-91583294 Msa0387580:CDS 35.0%
! ATTTCATGTTTTACCCTGCA+TGG - chr3_1:91583298-91583317 Msa0387580:CDS 35.0%
! TTTCATGTTTTACCCTGCAT+GGG - chr3_1:91583299-91583318 Msa0387580:CDS 35.0%
CTGATTCCAAAAAGGAAAGA+GGG + chr3_1:91583356-91583375 None:intergenic 35.0%
CGACAATTCTTGGCATTATT+TGG - chr3_1:91583538-91583557 Msa0387580:CDS 35.0%
GTCTATGTTGATCTTTGTAG+TGG - chr3_1:91583636-91583655 Msa0387580:intron 35.0%
TTTGTAGTGGTATTTGTGCT+AGG - chr3_1:91583649-91583668 Msa0387580:intron 35.0%
GTTCAGTTACAACATACCTT+TGG + chr3_1:91583689-91583708 None:intergenic 35.0%
GTTCAAACTATAGAAGTGGT+TGG + chr3_1:91583755-91583774 None:intergenic 35.0%
CATTAATTGCTATGGCATTC+TGG + chr3_1:91583873-91583892 None:intergenic 35.0%
!!! AGAAGTACTTTTCCAACTGT+CGG + chr3_1:91584104-91584123 None:intergenic 35.0%
! TATTGGTATTGGATCTGCAT+TGG - chr3_1:91584152-91584171 Msa0387580:intron 35.0%
GAGAAGAGAAAATCCAATCA+AGG + chr3_1:91584180-91584199 None:intergenic 35.0%
CATTATTCAGTTACAGGCAT+AGG + chr3_1:91584268-91584287 None:intergenic 35.0%
TAGTAGTATTCAGCCCATTA+AGG + chr3_1:91584354-91584373 None:intergenic 35.0%
ATATCCATTCACCAGATTGA+GGG + chr3_1:91584445-91584464 None:intergenic 35.0%
!! TCATTCTAGGATTGCTAGTA+AGG - chr3_1:91584468-91584487 Msa0387580:CDS 35.0%
GCCTTCATCCATAATAGTTA+TGG - chr3_1:91584686-91584705 Msa0387580:intron 35.0%
! AAGAAAGAAGAAAAGTGCAG+TGG + chr3_1:91584766-91584785 None:intergenic 35.0%
AATAAGATTCCCACACAAGA+AGG - chr3_1:91584816-91584835 Msa0387580:intron 35.0%
CATATTGTACCTTCTTGTGT+GGG + chr3_1:91584828-91584847 None:intergenic 35.0%
ACATATTGTACCTTCTTGTG+TGG + chr3_1:91584829-91584848 None:intergenic 35.0%
! CAAAGGCATATATACTGATG+AGG + chr3_1:91584920-91584939 None:intergenic 35.0%
CTCATCAGTATATATGCCTT+TGG - chr3_1:91584918-91584937 Msa0387580:intron 35.0%
! CATCTCTTGATTTTGCTCAA+CGG - chr3_1:91585073-91585092 Msa0387580:CDS 35.0%
! ATCTCTTGATTTTGCTCAAC+GGG - chr3_1:91585074-91585093 Msa0387580:CDS 35.0%
TGGCAACTCAAGTATTTCAT+GGG + chr3_1:91585205-91585224 None:intergenic 35.0%
TTGGCAACTCAAGTATTTCA+TGG + chr3_1:91585206-91585225 None:intergenic 35.0%
ACATATACACGAAGTACAGA+CGG - chr3_1:91585300-91585319 Msa0387580:intron 35.0%
TTGTTCTTCAAACATTCACG+AGG + chr3_1:91585333-91585352 None:intergenic 35.0%
CTTCAATCAACAAACCTTGT+TGG - chr3_1:91585407-91585426 Msa0387580:intron 35.0%
TAGACGAATAGGTGTATATG+GGG + chr3_1:91585464-91585483 None:intergenic 35.0%
CTTAGACGAATAGGTGTATA+TGG + chr3_1:91585466-91585485 None:intergenic 35.0%
GCATAGATACTTAGACGAAT+AGG + chr3_1:91585475-91585494 None:intergenic 35.0%
GGGCAAAGATGTATATTGTT+TGG + chr3_1:91585537-91585556 None:intergenic 35.0%
GTTGATTATAAGGAGCTCTA+GGG + chr3_1:91585557-91585576 None:intergenic 35.0%
AGTTGATTATAAGGAGCTCT+AGG + chr3_1:91585558-91585577 None:intergenic 35.0%
ATAATCAACTCCAAACGTAC+AGG - chr3_1:91585568-91585587 Msa0387580:intron 35.0%
TAATCAACTCCAAACGTACA+GGG - chr3_1:91585569-91585588 Msa0387580:intron 35.0%
! CAAGATCCTGAAAAGTACAA+TGG - chr3_1:91585693-91585712 Msa0387580:intron 35.0%
CATTACATTACTGTTGCTGA+TGG + chr3_1:91585813-91585832 None:intergenic 35.0%
TCACTGAAATGTCATGTGAT+CGG - chr3_1:91585869-91585888 Msa0387580:intron 35.0%
! GTGCTCTATTCTTGTTTAGA+TGG + chr3_1:91586011-91586030 None:intergenic 35.0%
!! TCGCTAGAATTTTTGGATGT+CGG + chr3_1:91586087-91586106 None:intergenic 35.0%
GAAGACAAAAATCCATTGGA+AGG - chr3_1:91586173-91586192 Msa0387580:intron 35.0%
TCTTGAGGAGATGATTCTAA+TGG - chr3_1:91586263-91586282 Msa0387580:intron 35.0%
!!! TATCACAAGCTCCCTTTTTT+GGG + chr3_1:91586499-91586518 None:intergenic 35.0%
GCCTATTAATCTATCCCATT+AGG + chr3_1:91586604-91586623 None:intergenic 35.0%
! ATCACCTAACGCTGAAATTT+TGG + chr3_1:91586711-91586730 None:intergenic 35.0%
GATGAAGATGACAAGAACAA+TGG - chr3_1:91586749-91586768 Msa0387580:intron 35.0%
AAAGATACAAACCTTCAAGG+GGG + chr3_1:91586796-91586815 None:intergenic 35.0%
!! GTGACTTGTCTTGGAATTTT+TGG + chr3_1:91586960-91586979 None:intergenic 35.0%
! TGAAGAAAAGTGACTTGTCT+TGG + chr3_1:91586969-91586988 None:intergenic 35.0%
TTTGTGCATGATGCAAGATT+TGG - chr3_1:91587416-91587435 Msa0387580:intron 35.0%
! ACATACTACAGACCGTTTTA+TGG + chr3_1:91587454-91587473 None:intergenic 35.0%
GTATGTAACTTCACCAACTA+TGG - chr3_1:91587472-91587491 Msa0387580:intron 35.0%
TAAGCTCCTAATGAGTTCAA+TGG + chr3_1:91587505-91587524 None:intergenic 35.0%
ATTAGGAGCTTAGCATTTGT+AGG - chr3_1:91587513-91587532 Msa0387580:intron 35.0%
TATCAGGAAATGAAGAGTCA+TGG - chr3_1:91587666-91587685 Msa0387580:intron 35.0%
CAACTACTACATGATGTTAG+TGG - chr3_1:91587708-91587727 Msa0387580:intron 35.0%
! ACAAGTGCTGTTAATATTCC+TGG + chr3_1:91587744-91587763 None:intergenic 35.0%
GGAATATTAACAGCACTTGT+AGG - chr3_1:91587744-91587763 Msa0387580:intron 35.0%
GTATTAGCTGGAAGAAAAAC+TGG - chr3_1:91587801-91587820 Msa0387580:intron 35.0%
! AAAACTGGTGGATACATTGA+AGG - chr3_1:91587816-91587835 Msa0387580:intron 35.0%
GATTCATAGACAGTAACATG+AGG + chr3_1:91587927-91587946 None:intergenic 35.0%
! AATCACTATTATTTTCGGCG+TGG - chr3_1:91587943-91587962 Msa0387580:intron 35.0%
TGTTGAAGAAGTTATGGAGT+TGG - chr3_1:91588103-91588122 Msa0387580:CDS 35.0%
ATGGTCTATCAACAGAACAA+AGG - chr3_1:91588174-91588193 Msa0387580:intron 35.0%
ACTTAGTATTGCTGTGGAAT+TGG - chr3_1:91588202-91588221 Msa0387580:intron 35.0%
TAACCCTTCAATCATCTTCA+TGG - chr3_1:91588229-91588248 Msa0387580:intron 35.0%
CATCCATGAAGATGATTGAA+GGG + chr3_1:91588235-91588254 None:intergenic 35.0%
TCATCCATGAAGATGATTGA+AGG + chr3_1:91588236-91588255 None:intergenic 35.0%
GTGAGAAATACAGTAGATAC+AGG - chr3_1:91588305-91588324 Msa0387580:intron 35.0%
AGATATGCAATAATCGACCA+AGG + chr3_1:91588438-91588457 None:intergenic 35.0%
CTCAGGTGTTCAAAAAATCA+AGG - chr3_1:91588670-91588689 Msa0387580:CDS 35.0%
GGTGTTCAAAAAATCAAGGA+TGG - chr3_1:91588674-91588693 Msa0387580:CDS 35.0%
AAAAGCTTACTGGTAAAGGT+TGG + chr3_1:91588789-91588808 None:intergenic 35.0%
TTGTCTGTACTTTCTTTAGG+AGG - chr3_1:91588874-91588893 Msa0387580:CDS 35.0%
AAGTACAACTCCTTCGAATT+TGG + chr3_1:91588936-91588955 None:intergenic 35.0%
GGAAACAAAATCTGTCCTAT+TGG - chr3_1:91589006-91589025 Msa0387580:CDS 35.0%
GTATTGAGAATGTCTCCAAT+AGG + chr3_1:91589024-91589043 None:intergenic 35.0%
TGGAGACATTCTCAATACAA+TGG - chr3_1:91589026-91589045 Msa0387580:CDS 35.0%
TAGACTGAATGATACTCCAA+TGG + chr3_1:91589075-91589094 None:intergenic 35.0%
AATAGAAACAACTGGTTGCA+CGG + chr3_1:91589326-91589345 None:intergenic 35.0%
GTTCTTGCAATAGAAACAAC+TGG + chr3_1:91589334-91589353 None:intergenic 35.0%
! TTGCAAGAACGGTTTTCTAT+CGG - chr3_1:91589344-91589363 Msa0387580:CDS 35.0%
TCTGCATTATCCTATGCATT+TGG - chr3_1:91589388-91589407 Msa0387580:CDS 35.0%
ATTATCCTATGCATTTGGTC+AGG - chr3_1:91589393-91589412 Msa0387580:CDS 35.0%
TTATACCTGACCAAATGCAT+AGG + chr3_1:91589401-91589420 None:intergenic 35.0%
CTTGATTGTAAAATTGCACC+TGG - chr3_1:91589524-91589543 Msa0387580:CDS 35.0%
CTAATCCTTTACTCCATGAT+TGG - chr3_1:91589769-91589788 Msa0387580:intron 35.0%
CATAAAGAAGGTCGTAGAAA+TGG + chr3_1:91589914-91589933 None:intergenic 35.0%
GTTCCAAAGAGTCATAAAGA+AGG + chr3_1:91589926-91589945 None:intergenic 35.0%
TACAGCAAATACCTATATGG+TGG - chr3_1:91590186-91590205 Msa0387580:intron 35.0%
! AAATACCTATATGGTGGAGA+TGG - chr3_1:91590192-91590211 Msa0387580:intron 35.0%
! ATTTTTGTCACCTAGTTGTG+AGG + chr3_1:91590264-91590283 None:intergenic 35.0%
ATGCAAACACAAATGCAAAG+AGG + chr3_1:91590406-91590425 None:intergenic 35.0%
!! ACTATCTTTTCTGGAAGTTG+AGG + chr3_1:91590442-91590461 None:intergenic 35.0%
AGTCAGCATGACATTCACTA+TGG - chr3_1:91581758-91581777 Msa0387580:three_prime_UTR 40.0%
AAATACAGTGAGAGAGACGT+TGG - chr3_1:91581784-91581803 Msa0387580:exon 40.0%
TCATCATGTTGTCTAGGTGT+TGG - chr3_1:91581812-91581831 Msa0387580:CDS 40.0%
CACAAGGTATGAACTGTTGA+TGG - chr3_1:91581835-91581854 Msa0387580:CDS 40.0%
! TGTTGATGGAACTCTCAAGA+AGG - chr3_1:91581849-91581868 Msa0387580:CDS 40.0%
! GTTGATGGAACTCTCAAGAA+GGG - chr3_1:91581850-91581869 Msa0387580:CDS 40.0%
AAGAACTTGCAAGACCGTTT+CGG - chr3_1:91582094-91582113 Msa0387580:intron 40.0%
GTTTCATAAGCTCTCCGAAA+CGG + chr3_1:91582111-91582130 None:intergenic 40.0%
TTGTTAACAGGTGCTTGGAT+TGG - chr3_1:91582304-91582323 Msa0387580:CDS 40.0%
GTAGGTGATGAAATGAGAAG+AGG - chr3_1:91582347-91582366 Msa0387580:CDS 40.0%
!! GAAATGAGAAGAGGTATCTC+CGG - chr3_1:91582356-91582375 Msa0387580:CDS 40.0%
! TAATCGCTTCTTTTGTCCTC+CGG + chr3_1:91582378-91582397 None:intergenic 40.0%
!! ACCAGCAAAAGTACTGTTCA+TGG - chr3_1:91582546-91582565 Msa0387580:intron 40.0%
! TCCATGAACAGTACTTTTGC+TGG + chr3_1:91582550-91582569 None:intergenic 40.0%
GCTAGAGTTCTTCGAATACA+CGG - chr3_1:91582762-91582781 Msa0387580:intron 40.0%
CTAGAGTTCTTCGAATACAC+GGG - chr3_1:91582763-91582782 Msa0387580:intron 40.0%
! CAGCAACACATTTTCTCTCT+GGG + chr3_1:91582798-91582817 None:intergenic 40.0%
! TCAGCAACACATTTTCTCTC+TGG + chr3_1:91582799-91582818 None:intergenic 40.0%
! AGGCATGCTTTTCAAAGGAA+TGG - chr3_1:91583043-91583062 Msa0387580:intron 40.0%
AGGAATGGCTTCTTATGAAG+AGG - chr3_1:91583058-91583077 Msa0387580:intron 40.0%
! TCCCTTTGTTTGTAGAACAC+AGG + chr3_1:91583279-91583298 None:intergenic 40.0%
CGTTACCCATATGGATTCTT+AGG - chr3_1:91583328-91583347 Msa0387580:CDS 40.0%
GGGATCCTAAGAATCCATAT+GGG + chr3_1:91583336-91583355 None:intergenic 40.0%
AGGGATCCTAAGAATCCATA+TGG + chr3_1:91583337-91583356 None:intergenic 40.0%
! TAGGATCCCTCTTTCCTTTT+TGG - chr3_1:91583347-91583366 Msa0387580:intron 40.0%
! GCTGATTCCAAAAAGGAAAG+AGG + chr3_1:91583357-91583376 None:intergenic 40.0%
!! CCATATCGCTGATTCCAAAA+AGG + chr3_1:91583364-91583383 None:intergenic 40.0%
!!! CCTTTTTGGAATCAGCGATA+TGG - chr3_1:91583361-91583380 Msa0387580:intron 40.0%
TCATATTACCTGCTAGCAGA+AGG + chr3_1:91583420-91583439 None:intergenic 40.0%
GGAGGTTTCATTATTGCCAA+AGG - chr3_1:91583670-91583689 Msa0387580:intron 40.0%
TTGTAGATGACATCAAGCCA+TGG - chr3_1:91583809-91583828 Msa0387580:intron 40.0%
ACATCAAGCCATGGATGATA+TGG - chr3_1:91583818-91583837 Msa0387580:intron 40.0%
CATCAAGCCATGGATGATAT+GGG - chr3_1:91583819-91583838 Msa0387580:intron 40.0%
ATCAAGCCATGGATGATATG+GGG - chr3_1:91583820-91583839 Msa0387580:intron 40.0%
TAATAGCCCCATATCATCCA+TGG + chr3_1:91583829-91583848 None:intergenic 40.0%
GCATTCTGGCCATACATTAT+AGG + chr3_1:91583859-91583878 None:intergenic 40.0%
AGGCAGTGACAAACAAGAAT+AGG + chr3_1:91583938-91583957 None:intergenic 40.0%
! AAAGTACTTCTCAAAGCCAG+AGG - chr3_1:91584113-91584132 Msa0387580:CDS 40.0%
ATCTTCTGTAAACAAGCCTC+TGG + chr3_1:91584132-91584151 None:intergenic 40.0%
TCAATGAGAGGATGAAGAGA+AGG + chr3_1:91584208-91584227 None:intergenic 40.0%
TATCCATTCACCAGATTGAG+GGG + chr3_1:91584444-91584463 None:intergenic 40.0%
GATATCCATTCACCAGATTG+AGG + chr3_1:91584446-91584465 None:intergenic 40.0%
!! TTCTAGGATTGCTAGTAAGG+TGG - chr3_1:91584471-91584490 Msa0387580:CDS 40.0%
TTTGTCATCTGATTCCCAGA+AGG - chr3_1:91584530-91584549 Msa0387580:CDS 40.0%
TCAGTTCATGCATGATCCAA+AGG + chr3_1:91584937-91584956 None:intergenic 40.0%
! TTTGGCTTATGCAGTTAGTG+TGG + chr3_1:91584964-91584983 None:intergenic 40.0%
TGATTTACTTGGCAGACACT+AGG + chr3_1:91584992-91585011 None:intergenic 40.0%
GGAAAATGTCTAAGTGGACA+AGG + chr3_1:91585042-91585061 None:intergenic 40.0%
!! CAAGGCCATTTTAATGTTCG+AGG + chr3_1:91585160-91585179 None:intergenic 40.0%
! AAAATGGCCTTGCTTTGAGT+AGG - chr3_1:91585168-91585187 Msa0387580:intron 40.0%
CAAGTATTTCATGGGAGTTG+AGG + chr3_1:91585197-91585216 None:intergenic 40.0%
TTCTTCAAACATTCACGAGG+AGG + chr3_1:91585330-91585349 None:intergenic 40.0%
! ATACAAGGTAATGGCGTGTT+TGG + chr3_1:91585386-91585405 None:intergenic 40.0%
!! TCAGTGCCATTGTACTTTTC+AGG + chr3_1:91585702-91585721 None:intergenic 40.0%
GTTCGAAAGAACCAACAACA+CGG - chr3_1:91585778-91585797 Msa0387580:intron 40.0%
TTCGAAAGAACCAACAACAC+GGG - chr3_1:91585779-91585798 Msa0387580:intron 40.0%
TCAAGAATCCAAGCATCCTT+GGG - chr3_1:91585903-91585922 Msa0387580:intron 40.0%
TGGTGACACTAATCCGATTT+AGG + chr3_1:91585981-91586000 None:intergenic 40.0%
CTTGTTTAGATGGCAGAAGT+TGG + chr3_1:91586001-91586020 None:intergenic 40.0%
GTGCGAAGACAAAAATCCAT+TGG - chr3_1:91586169-91586188 Msa0387580:intron 40.0%
TAGAATCATCTCCTCAAGAC+CGG + chr3_1:91586262-91586281 None:intergenic 40.0%
AATTACTGCTCACACGCATT+TGG + chr3_1:91586325-91586344 None:intergenic 40.0%
! AACTGCAAAGGGTGTAGTAA+AGG - chr3_1:91586399-91586418 Msa0387580:intron 40.0%
TTTCCTTTCTGTCTTCATCG+CGG + chr3_1:91586434-91586453 None:intergenic 40.0%
!!! ATCACAAGCTCCCTTTTTTG+GGG + chr3_1:91586498-91586517 None:intergenic 40.0%
!!! GTATCACAAGCTCCCTTTTT+TGG + chr3_1:91586500-91586519 None:intergenic 40.0%
CGATTCATGGTTAGATGAAC+TGG + chr3_1:91587134-91587153 None:intergenic 40.0%
TCTAACCATGAATCGAGAAG+AGG - chr3_1:91587139-91587158 Msa0387580:intron 40.0%
CACCTACCATTGAACTCATT+AGG - chr3_1:91587496-91587515 Msa0387580:intron 40.0%
CTCCTAATGAGTTCAATGGT+AGG + chr3_1:91587501-91587520 None:intergenic 40.0%
! GTCGGAGTTTTCAGATTTCA+CGG - chr3_1:91587612-91587631 Msa0387580:intron 40.0%
GAAGAGTCATGGAATGAACA+AGG - chr3_1:91587677-91587696 Msa0387580:intron 40.0%
ACACTCATGGATGTATTAGC+TGG - chr3_1:91587789-91587808 Msa0387580:intron 40.0%
TTAGCTGGAAGAAAAACTGG+TGG - chr3_1:91587804-91587823 Msa0387580:intron 40.0%
TTCGCAGTAACCACTAATTC+GGG + chr3_1:91587886-91587905 None:intergenic 40.0%
GTTCGCAGTAACCACTAATT+CGG + chr3_1:91587887-91587906 None:intergenic 40.0%
GAAGAGACTTAGTATTGCTG+TGG - chr3_1:91588196-91588215 Msa0387580:intron 40.0%
TTCATGGATGAACCAACATC+AGG - chr3_1:91588245-91588264 Msa0387580:intron 40.0%
CAGCTATTGCTGATGAAAAG+AGG - chr3_1:91588482-91588501 Msa0387580:intron 40.0%
CTATTGCTGATGAAAAGAGG+AGG - chr3_1:91588485-91588504 Msa0387580:intron 40.0%
ATTCTACAAGCTTGTGTGAG+TGG + chr3_1:91588541-91588560 None:intergenic 40.0%
ATCTAACGTGCACAAACTTC+AGG - chr3_1:91588643-91588662 Msa0387580:CDS 40.0%
ATGGTTATAATCCAGCCACA+TGG - chr3_1:91588693-91588712 Msa0387580:CDS 40.0%
TTACTGGTAAAGGTTGGAGT+TGG + chr3_1:91588783-91588802 None:intergenic 40.0%
CAGGAAAAGCTTACTGGTAA+AGG + chr3_1:91588793-91588812 None:intergenic 40.0%
ACAACACAGGAAAAGCTTAC+TGG + chr3_1:91588799-91588818 None:intergenic 40.0%
TGGCTAAGGTCATGAGAAAT+CGG + chr3_1:91589055-91589074 None:intergenic 40.0%
TTTCTCATGACCTTAGCCAT+TGG - chr3_1:91589056-91589075 Msa0387580:CDS 40.0%
GAATGATACTCCAATGGCTA+AGG + chr3_1:91589069-91589088 None:intergenic 40.0%
! AAAAAGCACAGCACAGTACA+TGG + chr3_1:91589281-91589300 None:intergenic 40.0%
!!! TACTGTGCTGTGCTTTTTCT+TGG - chr3_1:91589283-91589302 Msa0387580:CDS 40.0%
! TGCAAGAACGGTTTTCTATC+GGG - chr3_1:91589345-91589364 Msa0387580:CDS 40.0%
!! AATTGCACCTGGTTTTCACT+CGG - chr3_1:91589535-91589554 Msa0387580:CDS 40.0%
CAAACCCAATCATGGAGTAA+AGG + chr3_1:91589777-91589796 None:intergenic 40.0%
ACTCCATGATTGGGTTTGAA+TGG - chr3_1:91589779-91589798 Msa0387580:intron 40.0%
CTTCCATTCAAACCCAATCA+TGG + chr3_1:91589785-91589804 None:intergenic 40.0%
CATGATTGGGTTTGAATGGA+AGG - chr3_1:91589783-91589802 Msa0387580:intron 40.0%
AAAGAAGGTCGTAGAAATGG+CGG + chr3_1:91589911-91589930 None:intergenic 40.0%
CGACCTTCTTTATGACTCTT+TGG - chr3_1:91589920-91589939 Msa0387580:intron 40.0%
!! ACTCTTTGGAACTTGTTCTC+TGG - chr3_1:91589934-91589953 Msa0387580:intron 40.0%
TGGCTTTCTCATTCCTAAGA+CGG - chr3_1:91589954-91589973 Msa0387580:intron 40.0%
TAGTACCATCTCCACCATAT+AGG + chr3_1:91590200-91590219 None:intergenic 40.0%
! TATGGTGGAGATGGTACTAT+TGG - chr3_1:91590201-91590220 Msa0387580:intron 40.0%
! ATGGTGGAGATGGTACTATT+GGG - chr3_1:91590202-91590221 Msa0387580:intron 40.0%
CCATATAGTGTCCATGCAAT+GGG + chr3_1:91590233-91590252 None:intergenic 40.0%
CACCTAGTTGTGAGGTTATA+AGG + chr3_1:91590256-91590275 None:intergenic 40.0%
ATATGAGCAACAGCAACTTG+AGG + chr3_1:91590371-91590390 None:intergenic 40.0%
! CAAGTTGCTGTTGCTCATAT+AGG - chr3_1:91590371-91590390 Msa0387580:CDS 40.0%
! AAAGCATCAATCTCAGGGTC+TGG + chr3_1:91581896-91581915 None:intergenic 45.0%
GTCTTGCAAGTTCTTATGCC+AGG + chr3_1:91582089-91582108 None:intergenic 45.0%
! AACTCTAGCACGTTTTCACG+CGG + chr3_1:91582751-91582770 None:intergenic 45.0%
TCTTCGAATACACGGGCTTT+AGG - chr3_1:91582770-91582789 Msa0387580:intron 45.0%
TTTCACTAATGCAGCTGGGT+GGG + chr3_1:91582989-91583008 None:intergenic 45.0%
CCATCTTGAACAGTACCAAC+CGG + chr3_1:91583168-91583187 None:intergenic 45.0%
AGGTAGCCTAGAAACTGTCA+TGG + chr3_1:91583259-91583278 None:intergenic 45.0%
GTAGTGGTATTTGTGCTAGG+AGG - chr3_1:91583652-91583671 Msa0387580:intron 45.0%
! AGAATTGATGCACCGACAGT+TGG - chr3_1:91584089-91584108 Msa0387580:CDS 45.0%
ATCTGCATTGGAGCCTTGAT+TGG - chr3_1:91584164-91584183 Msa0387580:intron 45.0%
ATCCATTCACCAGATTGAGG+GGG + chr3_1:91584443-91584462 None:intergenic 45.0%
CTTCAACCTACGTTCCTTCT+GGG + chr3_1:91584547-91584566 None:intergenic 45.0%
ACTTCAACCTACGTTCCTTC+TGG + chr3_1:91584548-91584567 None:intergenic 45.0%
GGCAGACACTAGGTCATATT+TGG + chr3_1:91584982-91585001 None:intergenic 45.0%
TGCGGAGGAAAATGTCTAAG+TGG + chr3_1:91585048-91585067 None:intergenic 45.0%
TCAAGAGATGAACTATGCGG+AGG + chr3_1:91585063-91585082 None:intergenic 45.0%
GTATTTCATGGGAGTTGAGG+TGG + chr3_1:91585194-91585213 None:intergenic 45.0%
! TCAGGATTTGGTCTCACAAG+TGG + chr3_1:91585435-91585454 None:intergenic 45.0%
ATGGGGATTCTCTCAGGATT+TGG + chr3_1:91585447-91585466 None:intergenic 45.0%
GTGTATATGGGGATTCTCTC+AGG + chr3_1:91585453-91585472 None:intergenic 45.0%
CTTGCAACAGAGAAGACGAT+TGG + chr3_1:91585677-91585696 None:intergenic 45.0%
CTGAAATGTCATGTGATCGG+TGG - chr3_1:91585872-91585891 Msa0387580:intron 45.0%
GTCAAGAATCCAAGCATCCT+TGG - chr3_1:91585902-91585921 Msa0387580:intron 45.0%
ACCACCAAAACAGACTCAGA+AGG - chr3_1:91586133-91586152 Msa0387580:intron 45.0%
! AGAGCCTTCTGAGTCTGTTT+TGG + chr3_1:91586140-91586159 None:intergenic 45.0%
ATCCATTGGAAGGTGACGTT+TGG - chr3_1:91586183-91586202 Msa0387580:intron 45.0%
AATCCGCGATGAAGACAGAA+AGG - chr3_1:91586428-91586447 Msa0387580:intron 45.0%
AAACCACAACGATGACAGCT+AGG - chr3_1:91586457-91586476 Msa0387580:intron 45.0%
!!! TCACAAGCTCCCTTTTTTGG+GGG + chr3_1:91586497-91586516 None:intergenic 45.0%
TGATTCGAAAGCAGTCACTG+CGG - chr3_1:91586727-91586746 Msa0387580:intron 45.0%
CCATTCCTCTTCTCGATTCA+TGG + chr3_1:91587147-91587166 None:intergenic 45.0%
CCATGAATCGAGAAGAGGAA+TGG - chr3_1:91587144-91587163 Msa0387580:intron 45.0%
AGAGTTGAGTGACTTACTGC+TGG + chr3_1:91587229-91587248 None:intergenic 45.0%
CAATGGTAGGTGTCCATAGT+TGG + chr3_1:91587488-91587507 None:intergenic 45.0%
ACAGCACTTGTAGGTGTTAG+TGG - chr3_1:91587753-91587772 Msa0387580:intron 45.0%
TTGTAGGTGTTAGTGGTGCT+GGG - chr3_1:91587760-91587779 Msa0387580:intron 45.0%
GAAACATTCGCCCGAATTAG+TGG - chr3_1:91587873-91587892 Msa0387580:intron 45.0%
AGCACTTAGAGATGCTCTTG+TGG - chr3_1:91588136-91588155 Msa0387580:CDS 45.0%
GCACTTAGAGATGCTCTTGT+GGG - chr3_1:91588137-91588156 Msa0387580:CDS 45.0%
GGAGGACAAGTTATCTATGC+CGG - chr3_1:91588503-91588522 Msa0387580:intron 45.0%
CACAAACTTCAGGCTATCTC+AGG - chr3_1:91588653-91588672 Msa0387580:CDS 45.0%
! ACTGACTTCAAGCATCCATG+TGG + chr3_1:91588711-91588730 None:intergenic 45.0%
TACTCCAGCACCAAATTCGA+AGG - chr3_1:91588923-91588942 Msa0387580:CDS 45.0%
!! AACTCCTTCGAATTTGGTGC+TGG + chr3_1:91588930-91588949 None:intergenic 45.0%
GATTGGGTTTGAATGGAAGG+CGG - chr3_1:91589786-91589805 Msa0387580:intron 45.0%
GGTAGATCACATACCGTCTT+AGG + chr3_1:91589970-91589989 None:intergenic 45.0%
CCCATTGCATGGACACTATA+TGG - chr3_1:91590230-91590249 Msa0387580:intron 45.0%
GCCATATAGTGTCCATGCAA+TGG + chr3_1:91590234-91590253 None:intergenic 45.0%
! GGCCTTATAACCTCACAACT+AGG - chr3_1:91590251-91590270 Msa0387580:intron 45.0%
GAAATAGTGATACCAGGAGC+TGG - chr3_1:91590287-91590306 Msa0387580:CDS 45.0%
! AGCTGGAAGCATGGAACTAA+AGG - chr3_1:91590304-91590323 Msa0387580:CDS 45.0%
! TTGCTGTTGCTCATATAGGC+TGG - chr3_1:91590375-91590394 Msa0387580:exon 45.0%
TGCTGTTGCTCATATAGGCT+GGG - chr3_1:91590376-91590395 Msa0387580:exon 45.0%
!! AATATAATTAAATATCAAAA+GGG + chr3_1:91589991-91590010 None:intergenic 5.0%
!! AAATATAATTAAATATCAAA+AGG + chr3_1:91589992-91590011 None:intergenic 5.0%
!!! ATTTAATTATATTTTCATTA+TGG - chr3_1:91589998-91590017 Msa0387580:intron 5.0%
!!! ATTTTAAATAAAGAAAATAT+AGG + chr3_1:91590056-91590075 None:intergenic 5.0%
!! GTTGTCTAGGTGTTGGCACA+AGG - chr3_1:91581819-91581838 Msa0387580:CDS 50.0%
TCAAGAAGGGAGAGAGAAGC+TGG - chr3_1:91581863-91581882 Msa0387580:CDS 50.0%
!! ATGAGAAGAGGTATCTCCGG+AGG - chr3_1:91582359-91582378 Msa0387580:CDS 50.0%
ACTTGATGTAGGGGAGATGC+TGG - chr3_1:91582519-91582538 Msa0387580:intron 50.0%
!! CTCTGGTGCCGACTGTAAAA+GGG + chr3_1:91582668-91582687 None:intergenic 50.0%
!! TCTCTGGTGCCGACTGTAAA+AGG + chr3_1:91582669-91582688 None:intergenic 50.0%
GGAAATTGCGGCAGAGCTTA+AGG - chr3_1:91582942-91582961 Msa0387580:CDS 50.0%
CTTTCACTAATGCAGCTGGG+TGG + chr3_1:91582990-91583009 None:intergenic 50.0%
! CCGGTTGGTACTGTTCAAGA+TGG - chr3_1:91583165-91583184 Msa0387580:CDS 50.0%
GTAACGCAAATGCCCATGCA+GGG + chr3_1:91583314-91583333 None:intergenic 50.0%
GGGCATTTGCGTTACCCATA+TGG - chr3_1:91583319-91583338 Msa0387580:CDS 50.0%
! TTTCGGTTCGTTGCTGCAGT+TGG - chr3_1:91583586-91583605 Msa0387580:intron 50.0%
TCCATTCACCAGATTGAGGG+GGG + chr3_1:91584442-91584461 None:intergenic 50.0%
CTGATTCCCAGAAGGAACGT+AGG - chr3_1:91584538-91584557 Msa0387580:CDS 50.0%
GGCTCGATCAAGTAGTGCTA+AGG + chr3_1:91584745-91584764 None:intergenic 50.0%
TCTCACAAGTGGAGCCAACA+AGG + chr3_1:91585424-91585443 None:intergenic 50.0%
CAACTCCAAACGTACAGGGT+CGG - chr3_1:91585573-91585592 Msa0387580:intron 50.0%
TACATCCGACCCTGTACGTT+TGG + chr3_1:91585581-91585600 None:intergenic 50.0%
GGAGTTGCTGAGCAACATGA+GGG + chr3_1:91585656-91585675 None:intergenic 50.0%
TGGAGTTGCTGAGCAACATG+AGG + chr3_1:91585657-91585676 None:intergenic 50.0%
CTACTATGCCCAAGGATGCT+TGG + chr3_1:91585914-91585933 None:intergenic 50.0%
ATCCTTGGGCATAGTAGCAG+AGG - chr3_1:91585917-91585936 Msa0387580:intron 50.0%
!! AGCAGAGGCACTAAGTGATC+AGG - chr3_1:91585932-91585951 Msa0387580:intron 50.0%
!! GCCTTCTGAGTCTGTTTTGG+TGG + chr3_1:91586137-91586156 None:intergenic 50.0%
CTCCAAACGTCACCTTCCAA+TGG + chr3_1:91586188-91586207 None:intergenic 50.0%
CATTGGAAGGTGACGTTTGG+AGG - chr3_1:91586186-91586205 Msa0387580:intron 50.0%
GATACAAACCTTCAAGGGGG+TGG + chr3_1:91586793-91586812 None:intergenic 50.0%
GTTAGTGGTGCTTTCAGACC+AGG - chr3_1:91587723-91587742 Msa0387580:intron 50.0%
CTTGTAGGTGTTAGTGGTGC+TGG - chr3_1:91587759-91587778 Msa0387580:intron 50.0%
TGCTGGGAAGACAACACTCA+TGG - chr3_1:91587776-91587795 Msa0387580:intron 50.0%
! GTTGATAGACCATCCACACC+AGG + chr3_1:91588167-91588186 None:intergenic 50.0%
CTAGCATCAAGGCCTGATGT+TGG + chr3_1:91588260-91588279 None:intergenic 50.0%
TTGTGTGAGTGGCGATCAAG+AGG + chr3_1:91588530-91588549 None:intergenic 50.0%
ACTTCAAGCATCCATGTGGC+TGG + chr3_1:91588707-91588726 None:intergenic 50.0%
TTCTATCGGGAAAGAGCAGC+AGG - chr3_1:91589358-91589377 Msa0387580:CDS 50.0%
TCTATCGGGAAAGAGCAGCA+GGG - chr3_1:91589359-91589378 Msa0387580:CDS 50.0%
CATGAAGCCGAGTGAAAACC+AGG + chr3_1:91589545-91589564 None:intergenic 50.0%
TAGAAATGGCGGCAACATCG+AGG + chr3_1:91589900-91589919 None:intergenic 50.0%
ATTGGGCTTCTCCCATTGCA+TGG - chr3_1:91590219-91590238 Msa0387580:intron 50.0%
GATGTAGGGGAGATGCTGGT+AGG - chr3_1:91582523-91582542 Msa0387580:intron 55.0%
GGTAACGCAAATGCCCATGC+AGG + chr3_1:91583315-91583334 None:intergenic 55.0%
CCATTCACCAGATTGAGGGG+GGG + chr3_1:91584441-91584460 None:intergenic 55.0%
TGCTCAACGGGAACACTTGC+CGG - chr3_1:91585086-91585105 Msa0387580:CDS 55.0%
GAGGTGGCCTACTCAAAGCA+AGG + chr3_1:91585178-91585197 None:intergenic 55.0%
GGTTCTTGCACCCGTGTTGT+TGG + chr3_1:91585792-91585811 None:intergenic 55.0%
TGCCTCTGCTACTATGCCCA+AGG + chr3_1:91585922-91585941 None:intergenic 55.0%
AGAGCGTGTGCACAGGTGAA+TGG - chr3_1:91586222-91586241 Msa0387580:intron 55.0%
CAGCCTAGCTGTCATCGTTG+TGG + chr3_1:91586463-91586482 None:intergenic 55.0%
CAACGATGACAGCTAGGCTG+CGG - chr3_1:91586463-91586482 Msa0387580:intron 55.0%
GAAGCGAGGCCCCCAAAAAA+GGG - chr3_1:91586485-91586504 Msa0387580:intron 55.0%
TTCAAGGGGGTGGTGTCTAG+AGG + chr3_1:91586783-91586802 None:intergenic 55.0%
TCTAGACACCACCCCCTTGA+AGG - chr3_1:91586782-91586801 Msa0387580:intron 55.0%
GATGCTCTTGTGGGACTTCC+TGG - chr3_1:91588146-91588165 Msa0387580:CDS 55.0%
TCTTGTGGGACTTCCTGGTG+TGG - chr3_1:91588151-91588170 Msa0387580:CDS 55.0%
! TAGCAGCGGCTCTAGCATCA+AGG + chr3_1:91588271-91588290 None:intergenic 55.0%
GAGCCGCTGCTATCGTTATG+CGG - chr3_1:91588279-91588298 Msa0387580:intron 55.0%
GGTCCGCATAACGATAGCAG+CGG + chr3_1:91588285-91588304 None:intergenic 55.0%
TGAGTGGCGATCAAGAGGTC+CGG + chr3_1:91588525-91588544 None:intergenic 55.0%
GGAAGGCGGCGAACTTCTTA+TGG - chr3_1:91589800-91589819 Msa0387580:intron 55.0%
GATACCAGGAGCTGGAAGCA+TGG - chr3_1:91590295-91590314 Msa0387580:CDS 55.0%
AGTTCCATGCTTCCAGCTCC+TGG + chr3_1:91590302-91590321 None:intergenic 55.0%
GGTTCGCTCCTTCTGCTAGC+AGG - chr3_1:91583409-91583428 Msa0387580:intron 60.0%
CAACACTCCCCCCCTCAATC+TGG - chr3_1:91584431-91584450 Msa0387580:CDS 60.0%
CCCCCCCTCAATCTGGTGAA+TGG - chr3_1:91584438-91584457 Msa0387580:CDS 60.0%
GGAAGGTGACGTTTGGAGGC+TGG - chr3_1:91586190-91586209 Msa0387580:intron 60.0%
AGGTGACGTTTGGAGGCTGG+TGG - chr3_1:91586193-91586212 Msa0387580:intron 60.0%
GCGTGTGCACAGGTGAATGG+CGG - chr3_1:91586225-91586244 Msa0387580:intron 60.0%
GGAAGCGAGGCCCCCAAAAA+AGG - chr3_1:91586484-91586503 Msa0387580:intron 60.0%
AGGGGGTGGTGTCTAGAGGA+TGG + chr3_1:91586779-91586798 None:intergenic 60.0%
GTGGGACTTCCTGGTGTGGA+TGG - chr3_1:91588155-91588174 Msa0387580:intron 60.0%
ATGGCGGCAACATCGAGGCT+TGG + chr3_1:91589895-91589914 None:intergenic 60.0%
TGCACAGGTGAATGGCGGCG+AGG - chr3_1:91586230-91586249 Msa0387580:intron 65.0%
GGTGAATGGCGGCGAGGTTC+TGG - chr3_1:91586236-91586255 Msa0387580:intron 65.0%
! AATGGCGGCGAGGTTCTGGC+CGG - chr3_1:91586240-91586259 Msa0387580:intron 65.0%
! CGAGGTTCTGGCCGGTCTTG+AGG - chr3_1:91586248-91586267 Msa0387580:intron 65.0%
ACAGCTAGGCTGCGGAAGCG+AGG - chr3_1:91586471-91586490 Msa0387580:intron 65.0%
! GCGTGCGAGAGCGTGTGCAC+AGG - chr3_1:91586215-91586234 Msa0387580:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 91581685 91590560 91581685 ID=Msa0387580;Name=Msa0387580
chr3_1 mRNA 91581685 91590560 91581685 ID=Msa0387580-mRNA-1;Parent=Msa0387580;Name=Msa0387580-mRNA-1;_AED=0.41;_eAED=0.41;_QI=169|1|1|1|0.93|1|16|100|1177
chr3_1 exon 91581685 91582054 91581685 ID=Msa0387580-mRNA-1:exon:25602;Parent=Msa0387580-mRNA-1
chr3_1 exon 91582270 91582524 91582270 ID=Msa0387580-mRNA-1:exon:25601;Parent=Msa0387580-mRNA-1
chr3_1 exon 91582831 91583002 91582831 ID=Msa0387580-mRNA-1:exon:25600;Parent=Msa0387580-mRNA-1
chr3_1 exon 91583125 91583352 91583125 ID=Msa0387580-mRNA-1:exon:25599;Parent=Msa0387580-mRNA-1
chr3_1 exon 91583447 91583580 91583447 ID=Msa0387580-mRNA-1:exon:25598;Parent=Msa0387580-mRNA-1
chr3_1 exon 91583677 91583760 91583677 ID=Msa0387580-mRNA-1:exon:25597;Parent=Msa0387580-mRNA-1
chr3_1 exon 91583857 91584147 91583857 ID=Msa0387580-mRNA-1:exon:25596;Parent=Msa0387580-mRNA-1
chr3_1 exon 91584241 91584573 91584241 ID=Msa0387580-mRNA-1:exon:25595;Parent=Msa0387580-mRNA-1
chr3_1 exon 91585014 91585150 91585014 ID=Msa0387580-mRNA-1:exon:25594;Parent=Msa0387580-mRNA-1
chr3_1 exon 91585442 91585525 91585442 ID=Msa0387580-mRNA-1:exon:25593;Parent=Msa0387580-mRNA-1
chr3_1 exon 91588006 91588171 91588006 ID=Msa0387580-mRNA-1:exon:25592;Parent=Msa0387580-mRNA-1
chr3_1 exon 91588327 91588430 91588327 ID=Msa0387580-mRNA-1:exon:25591;Parent=Msa0387580-mRNA-1
chr3_1 exon 91588554 91588714 91588554 ID=Msa0387580-mRNA-1:exon:25590;Parent=Msa0387580-mRNA-1
chr3_1 exon 91588815 91589715 91588815 ID=Msa0387580-mRNA-1:exon:25589;Parent=Msa0387580-mRNA-1
chr3_1 exon 91589841 91589931 91589841 ID=Msa0387580-mRNA-1:exon:25588;Parent=Msa0387580-mRNA-1
chr3_1 exon 91590269 91590560 91590269 ID=Msa0387580-mRNA-1:exon:25587;Parent=Msa0387580-mRNA-1
chr3_1 five_prime_UTR 91590392 91590560 91590392 ID=Msa0387580-mRNA-1:five_prime_utr;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91590269 91590391 91590269 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91589841 91589931 91589841 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91588815 91589715 91588815 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91588554 91588714 91588554 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91588327 91588430 91588327 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91588006 91588171 91588006 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91585442 91585525 91585442 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91585014 91585150 91585014 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91584241 91584573 91584241 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91583857 91584147 91583857 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91583677 91583760 91583677 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91583447 91583580 91583447 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91583125 91583352 91583125 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91582831 91583002 91582831 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91582270 91582524 91582270 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 CDS 91581785 91582054 91581785 ID=Msa0387580-mRNA-1:cds;Parent=Msa0387580-mRNA-1
chr3_1 three_prime_UTR 91581685 91581784 91581685 ID=Msa0387580-mRNA-1:three_prime_utr;Parent=Msa0387580-mRNA-1
Gene Sequence

>Msa0387580

ATGGAACTCTCAAGAAGGGAGAGAGAAGCTGGAATTAAACCAGACCCTGAGATTGATGCTTTCATGAAGGCTATTGCATTATCAGGCCAAAAAACCAGTTTTGTAACTGATTATGTTCTCAAGGTGCTTGGATTGGATATTTGTGCTGACATTATGGTAGGTGATGAAATGAGAAGAGGTATCTCCGGAGGACAAAAGAAGCGATTAACAACAGGGGAGATGCTGGTAGGACCAGCAAAAGTACTGTTCATGGATGAAATATCAACAGGATTGGATAGCTCAACCACTTTTGAAATATGCAAGTTCATGAGACAAATGGTTCATATAATGGATGTAACCGTAGTCATTTCCCTTTTACAGTCGGCACCAGAGACATTTGAACTTTTTGACGACATTATTCTACTTTCAGAAGGTCAAATTGTATATCAAGGTCCGCGTGAAAACGTGCTAGAGTTCTTCGAATACACGGGCTTTAGGTGCCCAGAGAGAAAATGTGTTGCTGATTTCTTACAAGAAGTAACATCCAAGAAAGATCAACAACAATACTGGTTTAGAAGAGATGAACCTTATAGATATGTTTCAGTTCCTGAATTTGTTGATTTCTTTCATTCATTTCATATTGGAGAGGAAATTGCGGCAGAGCTTAAGGTTCCTTATAATAAGAGTCAAACCCACCCAGCTGCATTAGTGAAAGAAAAATATGGTATTTCAAATTGGAAACTATTTAAGGCATGCTTTTCAAAGGAATGGCTTCTTATGAAGAGGAATGCTTTTGTTTATGTGTTCAAAACAACACAGATAGCAATCATGTCTATTATTACTTTTACTGTGTTCTTTAGAACAAAAATGCCGGTTGGTACTGTTCAAGATGGACAAAAATTTCATGGTGCATTATTCTTTACAATGATAAATGTGATGTTCAATGGGATGGCAGAACTATCCATGACAGTTTCTAGGCTACCTGTGTTCTACAAACAAAGGGATTTCATGTTTTACCCTGCATGGGCATTTGCGTTACCCATATGGATTCTTAGGATCCCTCTTTCCTTTTTGGAATCAGCGATATGGATTGTTCTTACATATTTTACAATTGGGTTCGCTCCTTCTGCTAGCAGATTTTTTCGACAATTCTTGGCATTATTTGGCATTCATCAGATGGCTCTTTCTTTATTTCGGTTCGTTGCTGCAGTTGGTAGAACACCAGTTGTTTCAAATTCATTGTCTATGTTGATCTTTGTAGTGGTATTTGTGCTAGGAGGTTTCATTATTGCCAAAGATGACATCAAGCCATGGATGATATGGGGCTATTATATATCTCCTATAATGTATGGCCAGAATGCCATAGCAATTAATGAATTCTTAGACAAAAGATGGAGTAAACCAAATACAGACACAAGAATTGATGCACCGACAGTTGGAAAAGTACTTCTCAAAGCCAGAGGCTTGTTTACAGAAGATTATTGGTATTGGATCTGCATTGGAGCCTTGATTGGATTTTCTCTTCTCTTCAACCTTCTCTTCATCCTCTCATTGACTTATTTGAATCCGTTAGGTGATTCGAAAGCAGTCACTGCGGATGAAGATGACAAGAACAATGGAAATCCATCCTCTAGACACCACCCCCTTGAAGGTATGGACTTAGCAGTGAGAAATTCATCAGAAATTACCAGTTCATCTAACCATGAATCGAGAAGAGGAATGGTTCTACCGTTTCAACCACTTTCAATGGCATTCAATCATATTAGCTACTACATAGACATGCCAGCAGAAATGAAGAGTCATGGAATGAACAAGGAAAAACTTCAACTACTACATGATGTTAGTGGTGCTTTCAGACCAGGAATATTAACAGCACTTGTAGGTGTTAGTGGTGCTGGGAAGACAACACTCATGGATGTATTAGCTGGAAGAAAAACTGGTGGATACATTGAAGGAAATATTAGCATATCAGGTTACCAAAAGAATCAAGAAACATTCGCCCGAATTAGTGGTTACTGCGAACAGAATGATATTCACTCTCCTCATGTTACTGTCTATGAATCACTATTATTTTCGGCGTGGCTTCGTCTTCCTTCAGATGTAAAGAAACAAACTCGAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTAGAACTTAAAGCACTTAGAGATGCTCTTGTGGGACTTCCTGGTGTGGATGGTCTATCAACAGAACAAAGGAAGAGACTTAGTATTGCTGTGGAATTGGTTGCTAACCCTTCAATCATCTTCATGGATGAACCAACATCAGGCCTTGATGCTAGAGCCGCTGCTATCGTTATGCGGACCGTGAGAAATACAGTAGATACAGGGAGAACTGTTGTTTGCACAATTCATCAACCAAGTATAGACATTTTTGAAGCTTTTGATGAGCTATTGCTGATGAAAAGAGGAGGACAAGTTATCTATGCCGGACCTCTTGATCGCCACTCACACAAGCTTGTAGAATATTTTGAAGCTATCTCAGGTGTTCAAAAAATCAAGGATGGTTATAATCCAGCCACATGGATGCTTGAAGTCAGTTCTGCTTCAGTTGAGACTCAGTTAGATGTAGATTTTGCAGAAATTTATGCCAACTCCAACCTTTACCAGAGGAATCAAGAACTTATTAAGGAGCTGAGTACTCCAGCACCAAATTCGAAGGAGTTGTACTTCCCAACCAAATATTCTCAATCATTTTTGGTTCAATACAAAGCTAACTTCTGGAAACAAAATCTGTCCTATTGGAGACATTCTCAATACAATGGCGTCCGATTTCTCATGACCTTAGCCATTGGAGTATCATTCAGTCTAATATTTTGGCAGCAAGCCAAAAAGACCAAAAAACAACAAGATCTACTAAATCTTTTGGGAGCCATGTACTGTGCTGTGCTTTTTCTTGGCTTTATGAATTCTTCAACCGTGCAACCAGTTGTTTCTATTGCAAGAACGGTTTTCTATCGGGAAAGAGCAGCAGGGATGTATTCTGCATTATCCTATGCATTTGGTCAGATGGCAGTTGAGACAATTTATAATGCAGTTCAAACAACCATTTACACACTAATCCTTTACTCCATGATTGGGTTTGAATGGAAGGCGGCGAACTTCTTATGGTTTTATTACTACATATTTATGAGTTTTATGTACTTCAAATTGTTTGGAATGATGTTTGCTGCGCTAACACCAAGCCTCGATGTTGCCGCCATTTCTACGACCTTCTTTATGACTCTTTGGAACTTGTTCTCTGGCTTTCTCATTCCTAAGACGCAAATACCTATATGGTGGAGATGGTACTATTGGGCTTCTCCCATTGCATGGACACTATATGGCCTTATAACCTCACAACTAGGTGACAAAAATACAGAAATAGTGATACCAGGAGCTGGAAGCATGGAACTAAAGGAATTCTTGAAACAAAATTTGGGTTATAATCATAATTTTCTTCCTCAAGTTGCTGTTGCTCATATAGGCTGGGTTTTCCTCTTTGCATTTGTGTTTGCATTTAGCATCAAATTCCTCAACTTCCAGAAAAGATAG
Protein sequence

>Msa0387580

MELSRREREAGIKPDPEIDAFMKAIALSGQKTSFVTDYVLKVLGLDICADIMVGDEMRRGISGGQKKRLTTGEMLVGPAKVLFMDEISTGLDSSTTFEICKFMRQMVHIMDVTVVISLLQSAPETFELFDDIILLSEGQIVYQGPRENVLEFFEYTGFRCPERKCVADFLQEVTSKKDQQQYWFRRDEPYRYVSVPEFVDFFHSFHIGEEIAAELKVPYNKSQTHPAALVKEKYGISNWKLFKACFSKEWLLMKRNAFVYVFKTTQIAIMSIITFTVFFRTKMPVGTVQDGQKFHGALFFTMINVMFNGMAELSMTVSRLPVFYKQRDFMFYPAWAFALPIWILRIPLSFLESAIWIVLTYFTIGFAPSASRFFRQFLALFGIHQMALSLFRFVAAVGRTPVVSNSLSMLIFVVVFVLGGFIIAKDDIKPWMIWGYYISPIMYGQNAIAINEFLDKRWSKPNTDTRIDAPTVGKVLLKARGLFTEDYWYWICIGALIGFSLLFNLLFILSLTYLNPLGDSKAVTADEDDKNNGNPSSRHHPLEGMDLAVRNSSEITSSSNHESRRGMVLPFQPLSMAFNHISYYIDMPAEMKSHGMNKEKLQLLHDVSGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYQKNQETFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVKKQTRKMFVEEVMELVELKALRDALVGLPGVDGLSTEQRKRLSIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLDRHSHKLVEYFEAISGVQKIKDGYNPATWMLEVSSASVETQLDVDFAEIYANSNLYQRNQELIKELSTPAPNSKELYFPTKYSQSFLVQYKANFWKQNLSYWRHSQYNGVRFLMTLAIGVSFSLIFWQQAKKTKKQQDLLNLLGAMYCAVLFLGFMNSSTVQPVVSIARTVFYRERAAGMYSALSYAFGQMAVETIYNAVQTTIYTLILYSMIGFEWKAANFLWFYYYIFMSFMYFKLFGMMFAALTPSLDVAAISTTFFMTLWNLFSGFLIPKTQIPIWWRWYYWASPIAWTLYGLITSQLGDKNTEIVIPGAGSMELKEFLKQNLGYNHNFLPQVAVAHIGWVFLFAFVFAFSIKFLNFQKR*