AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0387590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387590 MtrunA17_Chr7g0266021 83.890 1018 65 8 40 1002 1 974 0.0 1672
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387590 AT2G36370.1 44.021 970 425 9 80 1002 42 940 0.0 774

Find 223 sgRNAs with CRISPR-Local

Find 815 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGTTCACTTGATATTTC+TGG 0.070713 3_1:-91623616 Msa0387590:CDS
TTAGGTGGATAGTTAGTTTA+TGG 0.158903 3_1:-91626931 Msa0387590:five_prime_UTR
GTCTCAAAACTGTAGAAATT+TGG 0.163579 3_1:-91617990 Msa0387590:CDS
GAACAGTTCTTTATTAATTC+TGG 0.163970 3_1:-91622366 Msa0387590:CDS
TGAAAGTAACATGGAAAATT+TGG 0.179484 3_1:-91625344 Msa0387590:CDS
TTGTGTCACCTGAATATTAA+AGG 0.212400 3_1:-91621755 Msa0387590:CDS
AATCAGTTTCCTTCGGTTAT+TGG 0.225580 3_1:-91622157 Msa0387590:CDS
TCATTCTTACATAAGAATTT+AGG 0.231967 3_1:-91626949 Msa0387590:five_prime_UTR
TCTCTGATGCACTTCTTCTT+TGG 0.240974 3_1:-91625369 Msa0387590:CDS
TGGAGGAAATTAGCGTAGTT+TGG 0.250284 3_1:-91626911 Msa0387590:five_prime_UTR
ACACAATGAAACAAAGAATT+TGG 0.252954 3_1:+91621772 None:intergenic
TCTTAGGGAGCACTTTATTT+TGG 0.259044 3_1:-91626114 Msa0387590:intron
TTCCTTCTCTCTAAGTGCTT+TGG 0.282939 3_1:-91620176 Msa0387590:CDS
CTGAACTGCTTCAAAGATAA+AGG 0.289299 3_1:+91622296 None:intergenic
GCATATATATCGCTGTTCTT+TGG 0.291326 3_1:-91626380 Msa0387590:CDS
TTTGGTTGAGCTTTCATTGC+TGG 0.296660 3_1:-91617972 Msa0387590:CDS
ATCTCATTCTCTTCTTCAAT+TGG 0.311419 3_1:+91626692 None:intergenic
CCCTCAAGGACAGTTGTAAA+TGG 0.313753 3_1:-91620998 Msa0387590:intron
CCTTTCCATACGCAGGGCCT+TGG 0.323626 3_1:-91615922 Msa0387590:intron
GTGGTCTGTGATACTTCATT+TGG 0.325392 3_1:-91621665 Msa0387590:CDS
CTTTATCTTTGAAGCAGTTC+AGG 0.325583 3_1:-91622295 Msa0387590:CDS
GGAGGAAATTAGCGTAGTTT+GGG 0.329166 3_1:-91626910 Msa0387590:five_prime_UTR
TTGGTTCACTTGATATTTCT+GGG 0.331157 3_1:-91623615 Msa0387590:CDS
TTAATTTACTACCTCGTAAA+GGG 0.334057 3_1:+91626333 None:intergenic
GAAGATAACAGTAAGTTATA+TGG 0.338219 3_1:+91625520 None:intergenic
AAGACCATCAATGTAGGTTT+AGG 0.343362 3_1:-91620133 Msa0387590:CDS
GGAAGAAATTGAATTTGGTT+GGG 0.359709 3_1:-91620206 Msa0387590:CDS
AAACACATCCTTTAATATTC+AGG 0.360453 3_1:+91621747 None:intergenic
ATGGATGACAAATGATGATT+TGG 0.364837 3_1:-91618020 Msa0387590:CDS
TTAGCTATGTGCTATTGTTT+TGG 0.375038 3_1:-91618115 Msa0387590:CDS
GCACTGAATATTCTCCCTAT+TGG 0.375220 3_1:-91623634 Msa0387590:CDS
GAAATATCAAGTGAACCAAT+AGG 0.379810 3_1:+91623619 None:intergenic
GAAGAACTGCATGCTGAGTT+AGG 0.386005 3_1:-91620244 Msa0387590:CDS
AGATTGGAAGAAATTGAATT+TGG 0.390991 3_1:-91620211 Msa0387590:CDS
GTAGGTTTAGGTGGAATGTT+AGG 0.394555 3_1:-91620121 Msa0387590:CDS
TCAAGACTTGGGGTCTTCTC+TGG 0.401933 3_1:+91622027 None:intergenic
GTAACTGATGCTGGAATTAG+AGG 0.402030 3_1:+91622087 None:intergenic
TGGAAGAAATTGAATTTGGT+TGG 0.404614 3_1:-91620207 Msa0387590:CDS
GGATGCATATCTAGAAGAAT+TGG 0.405148 3_1:-91614786 Msa0387590:three_prime_UTR
GATCGAAACAACGCAAAACT+TGG 0.405245 3_1:-91626835 Msa0387590:CDS
TCTAGCAAGGGACAGATTGC+TGG 0.406536 3_1:+91620076 None:intergenic
TTGGTTGAGCTTTCATTGCT+GGG 0.407344 3_1:-91617971 Msa0387590:CDS
CCGCCTCCATCACTGTCAAT+TGG 0.407651 3_1:-91626432 Msa0387590:CDS
TAATCTTCAAGCTCTGCATA+TGG 0.410536 3_1:-91621546 Msa0387590:CDS
GCGGTGTGCGTGAAGTTTGA+TGG 0.412456 3_1:+91626610 None:intergenic
GCCTTCTCAGTGGAAGCTTC+AGG 0.413370 3_1:-91626553 Msa0387590:intron
GAATTCATACTTCTCTTGTA+TGG 0.413612 3_1:+91622338 None:intergenic
AACTTCACGCACACCGCAAC+AGG 0.416021 3_1:-91626604 Msa0387590:CDS
TCCACCTAAACCTACATTGA+TGG 0.416098 3_1:+91620129 None:intergenic
GTTAGGAAAGAAGTGTAGAT+TGG 0.416911 3_1:-91620227 Msa0387590:CDS
TGTGTTTGTGTCACTGATAT+TGG 0.418037 3_1:-91621731 Msa0387590:CDS
TCCGAGTAAGCGTATATTCA+TGG 0.424739 3_1:+91614568 None:intergenic
TAATTTCAATGGCTCTTCCT+TGG 0.425453 3_1:-91620765 Msa0387590:CDS
CTTTCCATACGCAGGGCCTT+GGG 0.432276 3_1:-91615921 Msa0387590:intron
AGATGTTATTTGCGGACAAT+TGG 0.433112 3_1:+91622455 None:intergenic
TTCTATAATCCTCCTTTGCA+TGG 0.438366 3_1:+91622386 None:intergenic
GATAAAACTGTAACTGATGC+TGG 0.438648 3_1:+91622078 None:intergenic
TGGTGAAGGAAAGGCTTTAG+TGG 0.445904 3_1:-91614807 Msa0387590:exon
GGTACCGGTGGTATCACAAC+AGG 0.445991 3_1:+91622048 None:intergenic
AAATCATCATTTGTCATCCA+TGG 0.447737 3_1:+91618022 None:intergenic
CTGCATATGGGTGGCTGCAT+GGG 0.449484 3_1:-91621533 Msa0387590:intron
TTGCCTTTGTGGTTTGCTGC+AGG 0.451776 3_1:-91623816 Msa0387590:intron
GAAGAAATTGAATTTGGTTG+GGG 0.452274 3_1:-91620205 Msa0387590:CDS
TTTACTAGTGGTTCAGTTGA+AGG 0.458292 3_1:-91614762 Msa0387590:three_prime_UTR
GTCTTTAATGACGTCAATGC+AGG 0.458958 3_1:+91620151 None:intergenic
TGGTCTGTGATACTTCATTT+GGG 0.459634 3_1:-91621664 Msa0387590:CDS
ATTAATTTACTACCTCGTAA+AGG 0.461833 3_1:+91626332 None:intergenic
CTGCTTTATATTCAAGACTT+GGG 0.463614 3_1:+91622016 None:intergenic
CTTTGCTCAGCTATTTCTGA+TGG 0.463690 3_1:-91621623 Msa0387590:CDS
CCATTTACAACTGTCCTTGA+GGG 0.464316 3_1:+91620998 None:intergenic
AGATGCATAGCGACCAAGCC+TGG 0.464385 3_1:+91617555 None:intergenic
TTGCGTTGTTTCGATCGATC+TGG 0.464429 3_1:+91626842 None:intergenic
TTCACGTGCATGGCCAGGCT+TGG 0.465502 3_1:-91617568 Msa0387590:CDS
AAATATCAAGTGAACCAATA+GGG 0.471343 3_1:+91623620 None:intergenic
AGTATTGCAGATGTTATTTG+CGG 0.473450 3_1:+91622447 None:intergenic
CCATGGCAGATTTGAGCCTC+CGG 0.477171 3_1:-91621802 Msa0387590:intron
TGTGGAGAAATAACAGCAAA+TGG 0.478471 3_1:-91617064 Msa0387590:CDS
CTTTGAAGCAGTTCAGGAGG+TGG 0.479277 3_1:-91622289 Msa0387590:CDS
AATCATCATTTGTCATCCAT+GGG 0.483482 3_1:+91618023 None:intergenic
AATTCATACTTCTCTTGTAT+GGG 0.483939 3_1:+91622339 None:intergenic
TCAGGACAATCAGTTTCCTT+CGG 0.485615 3_1:-91622164 Msa0387590:CDS
GGCTGTCCTCTTCTTAACTC+AGG 0.486200 3_1:-91617950 Msa0387590:intron
AGCTTCCACTGAGAAGGCCT+CGG 0.487850 3_1:+91626558 None:intergenic
GTTATTGGAGAAGTGCTCTC+TGG 0.489266 3_1:-91622142 Msa0387590:CDS
CGTCTACGAGTCCCTGGAGG+GGG 0.491552 3_1:+91614889 None:intergenic
TTATCGTAAAATGTGAGGAT+TGG 0.492119 3_1:-91626080 Msa0387590:CDS
ATTCCATTCCATTCCATCCA+TGG 0.492590 3_1:-91626777 Msa0387590:CDS
ATAATTTCACGTGCATGGCC+AGG 0.492640 3_1:-91617573 Msa0387590:CDS
TTCGTAACATAAGAAATTTG+AGG 0.493709 3_1:+91621964 None:intergenic
CAACCAGGTATGTCCCTCTC+AGG 0.494819 3_1:+91620801 None:intergenic
AGCATGCAGTTCTTCATGTA+AGG 0.494895 3_1:+91620252 None:intergenic
TAATTATTACCTGAAAATGA+AGG 0.495822 3_1:+91620044 None:intergenic
ACTGCTTTATATTCAAGACT+TGG 0.496374 3_1:+91622015 None:intergenic
ATAGTGACTTGCAACATCTC+AGG 0.496965 3_1:-91623591 Msa0387590:CDS
TGCTCAGCTATTTCTGATGG+TGG 0.499452 3_1:-91621620 Msa0387590:CDS
TAAGATTCTTAAGGAAGGAA+AGG 0.500351 3_1:+91622209 None:intergenic
CGAAGTTTCTTTGTAGCCCA+AGG 0.502818 3_1:+91615905 None:intergenic
CCCATGAATATACGCTTACT+CGG 0.503884 3_1:-91614569 Msa0387590:three_prime_UTR
CAAAGAATTTGGAGATGTAC+CGG 0.504794 3_1:+91621783 None:intergenic
TCTGCATATGGGTGGCTGCA+TGG 0.507578 3_1:-91621534 Msa0387590:CDS
ACCCTCATTTGACTGTTGAC+AGG 0.512484 3_1:-91625489 Msa0387590:intron
AAGGATTATTGTTTCTAGCA+AGG 0.512864 3_1:+91620063 None:intergenic
TCTATAATCCTCCTTTGCAT+GGG 0.516021 3_1:+91622387 None:intergenic
TCGATCTGGCGCATGGATAC+CGG 0.517125 3_1:+91626856 None:intergenic
ATGCCTATTGTTTAGGAATG+TGG 0.521253 3_1:-91617082 Msa0387590:intron
AGGATTATTGTTTCTAGCAA+GGG 0.521348 3_1:+91620064 None:intergenic
GTTTCGATCGATCTGGCGCA+TGG 0.522288 3_1:+91626849 None:intergenic
TCATTAAAGACCATCAATGT+AGG 0.522914 3_1:-91620139 Msa0387590:CDS
TGAAACCTCCATGGATGGAA+TGG 0.522979 3_1:+91626769 None:intergenic
CTTGGTCGCTATGCATCTTG+AGG 0.526453 3_1:-91617550 Msa0387590:intron
CTTGGGGTCTTCTCTGGTAC+CGG 0.528541 3_1:+91622033 None:intergenic
ACCATCAATGTAGGTTTAGG+TGG 0.530655 3_1:-91620130 Msa0387590:CDS
CATATCTCTAGAATGTAAAG+AGG 0.533522 3_1:+91621589 None:intergenic
CACCACTCTTTGTATTTCCG+AGG 0.534005 3_1:-91626575 Msa0387590:CDS
AATCTTCAAGCTCTGCATAT+GGG 0.534611 3_1:-91621545 Msa0387590:CDS
ATGATAATTAAATTGAATAC+CGG 0.534755 3_1:-91626875 Msa0387590:CDS
AACCTGTCAACAGTCAAATG+AGG 0.536573 3_1:+91625487 None:intergenic
CAGGCACTATATAATTTCAA+TGG 0.536668 3_1:-91620776 Msa0387590:CDS
TTCTTACATAAGAATTTAGG+TGG 0.539686 3_1:-91626946 Msa0387590:five_prime_UTR
CTAGAACAGTGGTGAAGGAA+AGG 0.542613 3_1:-91614816 Msa0387590:CDS
TGTTACGAAACTCACCTTGG+AGG 0.542704 3_1:-91621950 Msa0387590:CDS
CATTGAAATTATATAGTGCC+TGG 0.544010 3_1:+91620777 None:intergenic
AACAGATAATTTCACGTGCA+TGG 0.545210 3_1:-91617578 Msa0387590:CDS
TGCTTTATATTCAAGACTTG+GGG 0.545456 3_1:+91622017 None:intergenic
ATCGTCTACGAGTCCCTGGA+GGG 0.545605 3_1:+91614887 None:intergenic
GGTGGATAGTTAGTTTATGG+AGG 0.545727 3_1:-91626928 Msa0387590:five_prime_UTR
TAACAAACTTAATTCGATTG+TGG 0.547906 3_1:-91621684 Msa0387590:CDS
TATATAGTGCCTGGTCAACC+AGG 0.548488 3_1:+91620786 None:intergenic
CATTTACAACTGTCCTTGAG+GGG 0.549394 3_1:+91620999 None:intergenic
GAGAGTGAAACCTCCATGGA+TGG 0.550388 3_1:+91626764 None:intergenic
ATTGCTTCGAAAATTGTCAC+TGG 0.552444 3_1:-91615764 Msa0387590:CDS
GTTACGAAACTCACCTTGGA+GGG 0.552444 3_1:-91621949 Msa0387590:CDS
TCTCACTAGAACAGTGGTGA+AGG 0.553269 3_1:-91614821 Msa0387590:CDS
ATGCTGTTAATTGCTTCAGC+CGG 0.556977 3_1:-91622233 Msa0387590:CDS
AGGGACATACCTGGTTGACC+AGG 0.557140 3_1:-91620795 Msa0387590:CDS
ACCATTTACAACTGTCCTTG+AGG 0.557294 3_1:+91620997 None:intergenic
CCTCGTTTGCACTAACAGCT+CGG 0.558772 3_1:-91626723 Msa0387590:CDS
CAGATTCCAATTGACAGTGA+TGG 0.560531 3_1:+91626426 None:intergenic
TTCCAAAGCACTTAGAGAGA+AGG 0.567121 3_1:+91620174 None:intergenic
GATATATGTGATGCAATTGA+AGG 0.567593 3_1:-91615742 Msa0387590:CDS
GTCTGAGAGTGAAACCTCCA+TGG 0.569180 3_1:+91626760 None:intergenic
TCTTTGGCTTGAAAGTAACA+TGG 0.575310 3_1:-91625353 Msa0387590:CDS
TTATTTGCGGACAATTGGAA+AGG 0.576652 3_1:+91622460 None:intergenic
ACCTGAAGCTTCCACTGAGA+AGG 0.577463 3_1:+91626552 None:intergenic
GACATCAGTTCTTCCCTCCA+AGG 0.577580 3_1:+91621936 None:intergenic
CCTCCATGGATGGAATGGAA+TGG 0.578095 3_1:+91626774 None:intergenic
ACCGATCGTCTACGAGTCCC+TGG 0.579235 3_1:+91614883 None:intergenic
CCGAGTAAGCGTATATTCAT+GGG 0.581968 3_1:+91614569 None:intergenic
ATGGATGGAATGGAATGGAA+TGG 0.583519 3_1:+91626779 None:intergenic
TTCTTAAGGAAGGAAAGGAC+CGG 0.583884 3_1:+91622214 None:intergenic
TGAAGAATCTATGCCTGAGA+GGG 0.584891 3_1:-91620814 Msa0387590:CDS
TAGAAACACTGGTGCTTGTG+TGG 0.590512 3_1:-91614855 Msa0387590:CDS
TGCAAAATCTAAGAAAGTTG+AGG 0.590585 3_1:-91618060 Msa0387590:CDS
TTATGTTACGAAACTCACCT+TGG 0.591743 3_1:-91621953 Msa0387590:CDS
TTGAAGAGTCTGAAAATCAG+AGG 0.592916 3_1:-91620334 Msa0387590:CDS
TCCAGGGACTCGTAGACGAT+CGG 0.595135 3_1:-91614884 Msa0387590:CDS
ACAACTCAGTGGTAACCTCA+AGG 0.595138 3_1:-91621036 Msa0387590:CDS
ATGCCTGAGAGGGACATACC+TGG 0.595563 3_1:-91620804 Msa0387590:CDS
GGGGAATTTGAAGCTTGACA+TGG 0.599635 3_1:+91618084 None:intergenic
TCCTAACCTGAGTTAAGAAG+AGG 0.599786 3_1:+91617944 None:intergenic
CATACCTGCATCATATCTAA+CGG 0.600693 3_1:-91622412 Msa0387590:CDS
TTGAAGAATCTATGCCTGAG+AGG 0.600725 3_1:-91620815 Msa0387590:CDS
GGATCCGTTAGATATGATGC+AGG 0.602978 3_1:+91622408 None:intergenic
TGGTATCACAACAGGGCTAG+AGG 0.605973 3_1:+91622056 None:intergenic
TCGAGTTACAGAATATTCAA+AGG 0.606067 3_1:-91623566 Msa0387590:intron
ACCACTGAGTTGTCCCCACA+AGG 0.611919 3_1:+91621046 None:intergenic
GCTTGATGTGTCAGACACCA+AGG 0.612531 3_1:-91620738 Msa0387590:intron
TGACACATCAAGCATTTCCA+AGG 0.613832 3_1:+91620748 None:intergenic
ATGCCTACAAAATTAAAGAA+CGG 0.613991 3_1:-91614599 Msa0387590:three_prime_UTR
GAGGAAATTAGCGTAGTTTG+GGG 0.614356 3_1:-91626909 Msa0387590:five_prime_UTR
TTAAGAATTTGCATAAACAC+AGG 0.614638 3_1:+91626403 None:intergenic
TCATGTAAGGAGGAAAAGCA+AGG 0.615273 3_1:+91620265 None:intergenic
ATTCCAATTGACAGTGATGG+AGG 0.615540 3_1:+91626429 None:intergenic
TAATTTACTACCTCGTAAAG+GGG 0.615660 3_1:+91626334 None:intergenic
CCAATTGACAGTGATGGAGG+CGG 0.615834 3_1:+91626432 None:intergenic
TGGTTCTTAACAGATTCATG+TGG 0.616006 3_1:-91623844 Msa0387590:intron
TATCTTTGAAGCAGTTCAGG+AGG 0.616607 3_1:-91622292 Msa0387590:CDS
TAATACTTGTAAGTTCATCA+AGG 0.617024 3_1:+91618135 None:intergenic
ACCTGTCAACAGTCAAATGA+GGG 0.617095 3_1:+91625488 None:intergenic
CCGAGCTGTTAGTGCAAACG+AGG 0.618777 3_1:+91626723 None:intergenic
CAGCTGGCTGAGGAAAGCCT+TGG 0.619317 3_1:-91623670 Msa0387590:CDS
GGCCTCGGAAATACAAAGAG+TGG 0.619732 3_1:+91626573 None:intergenic
TAACGGATCCCATGCAAAGG+AGG 0.620071 3_1:-91622395 Msa0387590:CDS
ATCGGTGCATGTAGAAACAC+TGG 0.621119 3_1:-91614866 Msa0387590:CDS
AGATATGCATTTGAATTCTG+TGG 0.624699 3_1:-91621573 Msa0387590:CDS
TACACTTATCGTAAAATGTG+AGG 0.624911 3_1:-91626085 Msa0387590:CDS
ATATGTGATGCAATTGAAGG+TGG 0.625068 3_1:-91615739 Msa0387590:CDS
ATCTAACGGATCCCATGCAA+AGG 0.625544 3_1:-91622398 Msa0387590:CDS
GTGCTCTGAAAATTGAACCA+AGG 0.626621 3_1:+91623653 None:intergenic
ATATCTCTAGAATGTAAAGA+GGG 0.628839 3_1:+91621590 None:intergenic
CCATTCCATTCCATCCATGG+AGG 0.632094 3_1:-91626774 Msa0387590:CDS
GATTTGAACACCATCCCTTG+AGG 0.634984 3_1:+91621021 None:intergenic
ATGCAGTTCTTCATGTAAGG+AGG 0.640640 3_1:+91620255 None:intergenic
AAGTCTTGAATATAAAGCAG+TGG 0.643072 3_1:-91622013 Msa0387590:CDS
TCGTCTACGAGTCCCTGGAG+GGG 0.644338 3_1:+91614888 None:intergenic
GTCTACGAGTCCCTGGAGGG+GGG 0.644425 3_1:+91614890 None:intergenic
GGCTTGAAAGAGTAACCCCA+TGG 0.644533 3_1:-91618039 Msa0387590:CDS
CGAAAATCTCACTAGAACAG+TGG 0.645693 3_1:-91614827 Msa0387590:CDS
TAGCCCTGTTGTGATACCAC+CGG 0.645971 3_1:-91622052 Msa0387590:CDS
AGGAAATTAGCGTAGTTTGG+GGG 0.646303 3_1:-91626908 Msa0387590:five_prime_UTR
GAAGCAGAAGACAACTGCAA+TGG 0.646503 3_1:-91625310 Msa0387590:CDS
TATTTCCGAGGCCTTCTCAG+TGG 0.647025 3_1:-91626563 Msa0387590:CDS
AAAGCACTTAGAGAGAAGGA+AGG 0.647316 3_1:+91620178 None:intergenic
GGGGTCTTCTCTGGTACCGG+TGG 0.648417 3_1:+91622036 None:intergenic
AGCACTTCTCCAATAACCGA+AGG 0.649851 3_1:+91622148 None:intergenic
GAGGGAAGAACTGATGTCAG+TGG 0.651083 3_1:-91621931 Msa0387590:intron
CAACTCAGTGGTAACCTCAA+GGG 0.652097 3_1:-91621035 Msa0387590:CDS
ATGGTGTTCAAATCCCCTCA+AGG 0.652754 3_1:-91621012 Msa0387590:CDS
CTTCAAGCTCTGCATATGGG+TGG 0.656850 3_1:-91621542 Msa0387590:CDS
GATCGTCTACGAGTCCCTGG+AGG 0.661205 3_1:+91614886 None:intergenic
AGCTGTTAGTGCAAACGAGG+AGG 0.661571 3_1:+91626726 None:intergenic
AATTTACTACCTCGTAAAGG+GGG 0.664518 3_1:+91626335 None:intergenic
TCCTTGTGGGGACAACTCAG+TGG 0.667251 3_1:-91621047 Msa0387590:CDS
TCTAGATTCATGAAATGACA+AGG 0.670840 3_1:+91621987 None:intergenic
ACATGGAAAATTTGGAGACG+CGG 0.672233 3_1:-91625336 Msa0387590:CDS
ATCATCATTTGTCATCCATG+GGG 0.674002 3_1:+91618024 None:intergenic
TCAGTGGTAACCTCAAGGGA+TGG 0.674816 3_1:-91621031 Msa0387590:CDS
AGTGGTGAATGAGCCTGTTG+CGG 0.677929 3_1:+91626591 None:intergenic
TAAATCAGAAACGATGACAT+CGG 0.679192 3_1:+91626655 None:intergenic
TAATATCTGACATCATTGTG+AGG 0.696853 3_1:-91618171 Msa0387590:CDS
TTACCTGCAGCAAACCACAA+AGG 0.721235 3_1:+91623813 None:intergenic
AGAATTTGGAGATGTACCGG+AGG 0.726563 3_1:+91621786 None:intergenic
GTACCGGTGGTATCACAACA+GGG 0.763736 3_1:+91622049 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAAAAAAAAAAAAGA+TGG + chr3_1:91615649-91615668 None:intergenic 10.0%
!!! TATTAGACTTAATTTTTTTT+AGG + chr3_1:91616782-91616801 None:intergenic 10.0%
!!! ATAGTTTTATTTATTTAAGT+GGG + chr3_1:91616812-91616831 None:intergenic 10.0%
!!! TATAGTTTTATTTATTTAAG+TGG + chr3_1:91616813-91616832 None:intergenic 10.0%
!! AATAAAAAAATTCAATTTGT+TGG + chr3_1:91618313-91618332 None:intergenic 10.0%
!!! ATTGAATTTTTTTATTAAGT+TGG - chr3_1:91618317-91618336 Msa0387590:intron 10.0%
!!! TTTTGTTGAAATTTTAATAT+TGG - chr3_1:91620917-91620936 Msa0387590:intron 10.0%
!! ATAATAATTCTACATAAATT+GGG + chr3_1:91625921-91625940 None:intergenic 10.0%
!! TATAATAATTCTACATAAAT+TGG + chr3_1:91625922-91625941 None:intergenic 10.0%
!!! GAAATTTTTATTAACTAAAA+TGG + chr3_1:91626233-91626252 None:intergenic 10.0%
!! ATGATAATTAAATTGAATAC+CGG - chr3_1:91614674-91614693 Msa0387590:three_prime_UTR 15.0%
!! AATTAATTAGACTAGAATAA+AGG + chr3_1:91615279-91615298 None:intergenic 15.0%
!!! TTTTTTTTTCTTTTCACTTT+TGG - chr3_1:91615655-91615674 Msa0387590:intron 15.0%
!! AAGATTATAATATAGAACTA+TGG + chr3_1:91616580-91616599 None:intergenic 15.0%
!! TTAATAATAATATTGCTCTT+GGG + chr3_1:91616641-91616660 None:intergenic 15.0%
!!! TAGTTTTATTTATTTAAGTG+GGG + chr3_1:91616811-91616830 None:intergenic 15.0%
!! AAAAAATAAAAATGAAAGAG+AGG + chr3_1:91617083-91617102 None:intergenic 15.0%
!!! AAAGAAACTCTTTTTATTTT+AGG - chr3_1:91617856-91617875 Msa0387590:intron 15.0%
!!! TACTTTTAAATTTTACTACT+TGG - chr3_1:91618006-91618025 Msa0387590:CDS 15.0%
!! AAATAATGGTTAAATCAATT+TGG + chr3_1:91618038-91618057 None:intergenic 15.0%
!! GTTAATGAATATTTAATGAA+AGG + chr3_1:91618171-91618190 None:intergenic 15.0%
!! ATAATTATGTGTGTATATTT+AGG - chr3_1:91618194-91618213 Msa0387590:intron 15.0%
!! AAGAATTAAATTATTCCTAA+TGG + chr3_1:91619037-91619056 None:intergenic 15.0%
!! TTCTATTAAAAATTTATACG+AGG + chr3_1:91620106-91620125 None:intergenic 15.0%
!!! TCGTATAAATTTTTAATAGA+AGG - chr3_1:91620105-91620124 Msa0387590:CDS 15.0%
!! TGAACAATAATTAATCTAAT+AGG + chr3_1:91620433-91620452 None:intergenic 15.0%
!! GAAATTATCATTAAATAAAG+GGG + chr3_1:91620586-91620605 None:intergenic 15.0%
!! GGAAATTATCATTAAATAAA+GGG + chr3_1:91620587-91620606 None:intergenic 15.0%
!! TGGAAATTATCATTAAATAA+AGG + chr3_1:91620588-91620607 None:intergenic 15.0%
!!! TCCCTTTTTTAAAAAAAAAT+GGG + chr3_1:91620616-91620635 None:intergenic 15.0%
!!! ATCCCTTTTTTAAAAAAAAA+TGG + chr3_1:91620617-91620636 None:intergenic 15.0%
!!! TATACTTTTAGTTAACATTA+TGG - chr3_1:91621034-91621053 Msa0387590:CDS 15.0%
!! ACAAGTTAATAAAATTGAAA+GGG + chr3_1:91621140-91621159 None:intergenic 15.0%
!!! ACATTTTTGCATTTTTTTTT+TGG - chr3_1:91621786-91621805 Msa0387590:CDS 15.0%
!!! CATTTTTGCATTTTTTTTTT+GGG - chr3_1:91621787-91621806 Msa0387590:CDS 15.0%
!!! ATTTTTGCATTTTTTTTTTG+GGG - chr3_1:91621788-91621807 Msa0387590:CDS 15.0%
!! AAACAATATACTTATCTTTA+GGG + chr3_1:91622210-91622229 None:intergenic 15.0%
!! AAAACAATATACTTATCTTT+AGG + chr3_1:91622211-91622230 None:intergenic 15.0%
!!! TATATTGTTTTGTAATTTGT+AGG - chr3_1:91622220-91622239 Msa0387590:CDS 15.0%
!!! ATATTGTTTTGTAATTTGTA+GGG - chr3_1:91622221-91622240 Msa0387590:CDS 15.0%
!! AAACTATAAGATAAACTATT+AGG + chr3_1:91622375-91622394 None:intergenic 15.0%
!!! GTTTATCTTATAGTTTTTTT+AGG - chr3_1:91622379-91622398 Msa0387590:CDS 15.0%
!!! ATAGAATATAATTTTTCTAC+TGG - chr3_1:91624250-91624269 Msa0387590:intron 15.0%
!!! TAGAATATAATTTTTCTACT+GGG - chr3_1:91624251-91624270 Msa0387590:intron 15.0%
!!! AATAAGTTTATGTATTTTTC+AGG - chr3_1:91624593-91624612 Msa0387590:intron 15.0%
!!! ATTTTACAATTATAATGTGA+GGG + chr3_1:91624793-91624812 None:intergenic 15.0%
!! AAAATTTATGAAGAACTTAA+AGG - chr3_1:91625024-91625043 Msa0387590:intron 15.0%
!! AAATTTATGAAGAACTTAAA+GGG - chr3_1:91625025-91625044 Msa0387590:intron 15.0%
!!! TTTAAGTTTGACAAAAATAT+CGG + chr3_1:91625090-91625109 None:intergenic 15.0%
!! TCATTCTTACATAAGAATTT+AGG - chr3_1:91614600-91614619 Msa0387590:three_prime_UTR 20.0%
!!! ATTATACAGCCATTTTAAAA+AGG + chr3_1:91615857-91615876 None:intergenic 20.0%
!! GTTAATAATAATATTGCTCT+TGG + chr3_1:91616642-91616661 None:intergenic 20.0%
!!! AGTTTTATTTATTTAAGTGG+GGG + chr3_1:91616810-91616829 None:intergenic 20.0%
!! TAAGTGATTATACAAATTGA+GGG + chr3_1:91616928-91616947 None:intergenic 20.0%
!! TTAAGTGATTATACAAATTG+AGG + chr3_1:91616929-91616948 None:intergenic 20.0%
!!! AAATTGCGTTTTTATTTTAC+TGG - chr3_1:91617171-91617190 Msa0387590:intron 20.0%
!!! AATTGCGTTTTTATTTTACT+GGG - chr3_1:91617172-91617191 Msa0387590:intron 20.0%
!!! CAAATTTTTCCATTAAATTC+TGG - chr3_1:91617597-91617616 Msa0387590:intron 20.0%
!!! ATTGCATAACCTTTTATTAT+TGG - chr3_1:91617685-91617704 Msa0387590:intron 20.0%
!! TGTTAAGAACCAATAATAAA+AGG + chr3_1:91617697-91617716 None:intergenic 20.0%
!! AATGAAAGGAAATTAATGAA+AGG + chr3_1:91618157-91618176 None:intergenic 20.0%
!!! ATTTGTTAAATTCATGTACA+AGG - chr3_1:91618458-91618477 Msa0387590:intron 20.0%
!!! TATTATTTCTTTTGATGAGA+GGG - chr3_1:91618612-91618631 Msa0387590:intron 20.0%
!!! TCTTATTTCACTTTTGTTAT+TGG - chr3_1:91618663-91618682 Msa0387590:intron 20.0%
!!! CTTATTTCACTTTTGTTATT+GGG - chr3_1:91618664-91618683 Msa0387590:intron 20.0%
!!! TTATTTCACTTTTGTTATTG+GGG - chr3_1:91618665-91618684 Msa0387590:intron 20.0%
!!! GACATTACTACATTTTATTT+AGG + chr3_1:91618779-91618798 None:intergenic 20.0%
!!! TTCAAAAAACTTTGATTTCT+TGG + chr3_1:91618883-91618902 None:intergenic 20.0%
!!! AGTTTTTTGAATGTATCTAT+TGG - chr3_1:91618892-91618911 Msa0387590:intron 20.0%
!!! TTTCTTTCTATTAGTTTGTT+TGG - chr3_1:91620048-91620067 Msa0387590:intron 20.0%
!! AGATGGTTTAAATAAAACAA+AGG - chr3_1:91620155-91620174 Msa0387590:CDS 20.0%
!! ATTATTGTTCAAGCATAATA+AGG - chr3_1:91620442-91620461 Msa0387590:intron 20.0%
!! TTATTGTTCAAGCATAATAA+GGG - chr3_1:91620443-91620462 Msa0387590:intron 20.0%
!!! TCCCCATTTTTTTTTAAAAA+AGG - chr3_1:91620611-91620630 Msa0387590:intron 20.0%
!!! CCCTTTTTTAAAAAAAAATG+GGG + chr3_1:91620615-91620634 None:intergenic 20.0%
!!! CCCCATTTTTTTTTAAAAAA+GGG - chr3_1:91620612-91620631 Msa0387590:intron 20.0%
!!! CTTTTAATAGAAGATGTTAA+TGG - chr3_1:91620880-91620899 Msa0387590:intron 20.0%
!!! TAATATTGGTTAGAGTTTTA+AGG - chr3_1:91620931-91620950 Msa0387590:intron 20.0%
!! CACAAGTTAATAAAATTGAA+AGG + chr3_1:91621141-91621160 None:intergenic 20.0%
!!! GGTTGTAAAAATTTGTTAAA+AGG - chr3_1:91621236-91621255 Msa0387590:intron 20.0%
!! TAATTATTACCTGAAAATGA+AGG + chr3_1:91621508-91621527 None:intergenic 20.0%
!!! TTTTTGCATTTTTTTTTTGG+GGG - chr3_1:91621789-91621808 Msa0387590:CDS 20.0%
!!! GATTATTTTCTTTTTGTCAA+TGG + chr3_1:91622008-91622027 None:intergenic 20.0%
!! TAATTAGTTGTATCCAAATA+TGG + chr3_1:91622338-91622357 None:intergenic 20.0%
!!! GATGTAAATATCTCAAATTT+TGG + chr3_1:91622636-91622655 None:intergenic 20.0%
!! TTTATCACATTTCTAAACTT+TGG - chr3_1:91623049-91623068 Msa0387590:intron 20.0%
!!! TATTGTTAAATAGGTTGATT+GGG + chr3_1:91623121-91623140 None:intergenic 20.0%
!!! TCAAATTTTAAGTTATTCCT+TGG - chr3_1:91623251-91623270 Msa0387590:intron 20.0%
!! TTGCAATTAATTTAATTCCT+TGG - chr3_1:91623652-91623671 Msa0387590:CDS 20.0%
!! TTATTGATATTCTGATCATA+TGG + chr3_1:91623724-91623743 None:intergenic 20.0%
!!! TAAATTTTCAGCATTTGATA+AGG + chr3_1:91623918-91623937 None:intergenic 20.0%
!!! TAATTTCATTAGTTTACAAG+GGG + chr3_1:91624047-91624066 None:intergenic 20.0%
!!! GTAATTTCATTAGTTTACAA+GGG + chr3_1:91624048-91624067 None:intergenic 20.0%
!! TCATGTTATAAACATGAATA+AGG + chr3_1:91624070-91624089 None:intergenic 20.0%
!!! AGAATATAATTTTTCTACTG+GGG - chr3_1:91624252-91624271 Msa0387590:intron 20.0%
!! AAACTTATTTGCAGAAAAAA+GGG + chr3_1:91624582-91624601 None:intergenic 20.0%
!! TAAACTTATTTGCAGAAAAA+AGG + chr3_1:91624583-91624602 None:intergenic 20.0%
!!! ATTTTACAATTCTAATGTGA+GGG + chr3_1:91624709-91624728 None:intergenic 20.0%
!! AAAATCTAAATCATGAATGA+TGG - chr3_1:91624724-91624743 Msa0387590:intron 20.0%
!!! GATTTTACAATTATAATGTG+AGG + chr3_1:91624794-91624813 None:intergenic 20.0%
!! AAAATCTAAATCATGAATGA+TGG - chr3_1:91624724-91624743 Msa0387590:intron 20.0%
!! TTAAGTTTGACAAAAATATC+GGG + chr3_1:91625089-91625108 None:intergenic 20.0%
!!! GATATTTTTGTCAAACTTAA+AGG - chr3_1:91625089-91625108 Msa0387590:intron 20.0%
!! ATTTCATTAGATGATTATGT+AGG - chr3_1:91625282-91625301 Msa0387590:intron 20.0%
!!! TATTTGTTAATTGTAGGTTA+AGG + chr3_1:91625336-91625355 None:intergenic 20.0%
! TTCTTACATAAGAATTTAGG+TGG - chr3_1:91614603-91614622 Msa0387590:three_prime_UTR 25.0%
! TTAAGAATTTGCATAAACAC+AGG + chr3_1:91615149-91615168 None:intergenic 25.0%
! TTAATTTACTACCTCGTAAA+GGG + chr3_1:91615219-91615238 None:intergenic 25.0%
! ATTAATTTACTACCTCGTAA+AGG + chr3_1:91615220-91615239 None:intergenic 25.0%
! TCTAGTCTAATTAATTCTCT+TGG - chr3_1:91615283-91615302 Msa0387590:intron 25.0%
! AAAAACAGTTAGAATGAACT+TGG + chr3_1:91615692-91615711 None:intergenic 25.0%
! TTCATTCTTCACTTATGTAT+CGG - chr3_1:91615735-91615754 Msa0387590:CDS 25.0%
!! TTTTCTTTCTGTTATAGATG+TGG - chr3_1:91615976-91615995 Msa0387590:intron 25.0%
! TTTCTTTCTGTTATAGATGT+GGG - chr3_1:91615977-91615996 Msa0387590:intron 25.0%
! GAAGATAACAGTAAGTTATA+TGG + chr3_1:91616032-91616051 None:intergenic 25.0%
! ACATGCAAAGTAAAATACAA+CGG + chr3_1:91616112-91616131 None:intergenic 25.0%
! TGAAAGTAACATGGAAAATT+TGG - chr3_1:91616205-91616224 Msa0387590:intron 25.0%
! TATAAATAACACATCACTGA+TGG + chr3_1:91616451-91616470 None:intergenic 25.0%
!!! ATCAGTGATGTGTTATTTAT+AGG - chr3_1:91616450-91616469 Msa0387590:intron 25.0%
!!! GTTTTATTTATTTAAGTGGG+GGG + chr3_1:91616809-91616828 None:intergenic 25.0%
!!! ATTGCGTTTTTATTTTACTG+GGG - chr3_1:91617173-91617192 Msa0387590:intron 25.0%
! GTATAAATGACATGTTAAGT+TGG + chr3_1:91617659-91617678 None:intergenic 25.0%
! AAATATCAAGTGAACCAATA+GGG + chr3_1:91617932-91617951 None:intergenic 25.0%
! GCAAACAAGCATATAAATAA+TGG + chr3_1:91618052-91618071 None:intergenic 25.0%
!! TACTAATTGATAAGCTTTGA+AGG + chr3_1:91618086-91618105 None:intergenic 25.0%
!!! AATCAATTTTTTTTCCTCTC+TGG + chr3_1:91618130-91618149 None:intergenic 25.0%
! GTTTGTAGTATACCTAAATT+TGG - chr3_1:91618395-91618414 Msa0387590:intron 25.0%
! TTATCATGCATACCAAATTT+AGG + chr3_1:91618410-91618429 None:intergenic 25.0%
! TAATCATGTTAATGCTTCAT+TGG - chr3_1:91618427-91618446 Msa0387590:intron 25.0%
!! GATAGTATTTTCTGACATTA+TGG + chr3_1:91618592-91618611 None:intergenic 25.0%
!!! CTATTATTTCTTTTGATGAG+AGG - chr3_1:91618611-91618630 Msa0387590:intron 25.0%
! AATATAATACAAACACTGTG+AGG - chr3_1:91618640-91618659 Msa0387590:intron 25.0%
!!! CATTTTATTTAGGCAAAGAT+TGG + chr3_1:91618769-91618788 None:intergenic 25.0%
! GAACAGTTCTTTATTAATTC+TGG - chr3_1:91619183-91619202 Msa0387590:intron 25.0%
! AATTCATACTTCTCTTGTAT+GGG + chr3_1:91619213-91619232 None:intergenic 25.0%
!!! AGGTTTCTAACATTTTTTGT+GGG + chr3_1:91619236-91619255 None:intergenic 25.0%
!!! AAGGTTTCTAACATTTTTTG+TGG + chr3_1:91619237-91619256 None:intergenic 25.0%
!! CAGCTTATCTTTTAAATATC+AGG - chr3_1:91619367-91619386 Msa0387590:intron 25.0%
! TTCGTAACATAAGAAATTTG+AGG + chr3_1:91619588-91619607 None:intergenic 25.0%
! TGGATAATATGAAGAAATTG+TGG + chr3_1:91619730-91619749 None:intergenic 25.0%
! CAATTTCTTCATATTATCCA+TGG - chr3_1:91619730-91619749 Msa0387590:intron 25.0%
! ACACAATGAAACAAAGAATT+TGG + chr3_1:91619780-91619799 None:intergenic 25.0%
! AAACACATCCTTTAATATTC+AGG + chr3_1:91619805-91619824 None:intergenic 25.0%
! TAACAAACTTAATTCGATTG+TGG - chr3_1:91619865-91619884 Msa0387590:intron 25.0%
!!! ATATCTCTAGAATGTAAAGA+GGG + chr3_1:91619962-91619981 None:intergenic 25.0%
! CAAAATGAATTTGTAAATCC+TGG - chr3_1:91620080-91620099 Msa0387590:CDS 25.0%
! ATCTTTATGAAACATGAAGA+TGG + chr3_1:91620139-91620158 None:intergenic 25.0%
! ATCTTCATGTTTCATAAAGA+TGG - chr3_1:91620138-91620157 Msa0387590:CDS 25.0%
! TCAATATACTACACAAAACT+AGG + chr3_1:91620208-91620227 None:intergenic 25.0%
! TCCATAGTATCAATATTTGA+AGG + chr3_1:91620321-91620340 None:intergenic 25.0%
! GAAAATTAAACCCAAAAAAC+TGG + chr3_1:91620363-91620382 None:intergenic 25.0%
! TTAAAAAAAAATGGGGAAGA+TGG + chr3_1:91620608-91620627 None:intergenic 25.0%
! TTGGAATGTTTGTTTACATT+CGG - chr3_1:91620962-91620981 Msa0387590:intron 25.0%
!!! GCATTAAGTTTTGTTATTCA+TGG - chr3_1:91621182-91621201 Msa0387590:intron 25.0%
! AGATTGGAAGAAATTGAATT+TGG - chr3_1:91621338-91621357 Msa0387590:intron 25.0%
!! AACAATAATCCTTCATTTTC+AGG - chr3_1:91621496-91621515 Msa0387590:intron 25.0%
!! TTTCTCTAGTGTTTTCTATA+CGG + chr3_1:91621599-91621618 None:intergenic 25.0%
! TTGTATCTTAGAGTAAGTTA+GGG + chr3_1:91621752-91621771 None:intergenic 25.0%
! ATTGTATCTTAGAGTAAGTT+AGG + chr3_1:91621753-91621772 None:intergenic 25.0%
! GAATCTATGAATTCTGATAT+AGG - chr3_1:91621913-91621932 Msa0387590:intron 25.0%
! TGACAAAAAGAAAATAATCG+TGG - chr3_1:91622009-91622028 Msa0387590:CDS 25.0%
!! ATTTTGCTAGGATTAAAAAG+TGG + chr3_1:91622166-91622185 None:intergenic 25.0%
!!! ATGTAGTTTTGTATTTTGCT+AGG + chr3_1:91622178-91622197 None:intergenic 25.0%
! GTTCTATCATAATCCATATT+TGG - chr3_1:91622322-91622341 Msa0387590:CDS 25.0%
!! GAAATAATGATGGAACTTAA+TGG + chr3_1:91622746-91622765 None:intergenic 25.0%
! GAAAAGATTTAATGATGTCT+TGG + chr3_1:91622784-91622803 None:intergenic 25.0%
!!! TAAACTTTGGTTTGTTGTTA+TGG - chr3_1:91623062-91623081 Msa0387590:intron 25.0%
!!! GTATTGTTAAATAGGTTGAT+TGG + chr3_1:91623122-91623141 None:intergenic 25.0%
! CTTGACATGTATTGTTAAAT+AGG + chr3_1:91623130-91623149 None:intergenic 25.0%
! CTATTTAACAATACATGTCA+AGG - chr3_1:91623128-91623147 Msa0387590:intron 25.0%
! TAATACTTGTAAGTTCATCA+AGG + chr3_1:91623417-91623436 None:intergenic 25.0%
!! AACTTTCTTAGATTTTGCAT+GGG + chr3_1:91623488-91623507 None:intergenic 25.0%
! ATTATCAAAATGGCGTATAT+TGG + chr3_1:91623758-91623777 None:intergenic 25.0%
! GGACAAAACAATTATCAAAA+TGG + chr3_1:91623768-91623787 None:intergenic 25.0%
! AACAAAGAGAAAAAGTAACA+GGG - chr3_1:91623827-91623846 Msa0387590:CDS 25.0%
!! AATTTCATTAGTTTACAAGG+GGG + chr3_1:91624046-91624065 None:intergenic 25.0%
!! GGTAATTTCATTAGTTTACA+AGG + chr3_1:91624049-91624068 None:intergenic 25.0%
! TAGTTTAGATTATGCATATG+TGG - chr3_1:91624353-91624372 Msa0387590:intron 25.0%
! AGTTTAGATTATGCATATGT+GGG - chr3_1:91624354-91624373 Msa0387590:intron 25.0%
! TAATGTGTTAATGAGATAGA+AGG - chr3_1:91624395-91624414 Msa0387590:intron 25.0%
! AATGTGTTAATGAGATAGAA+GGG - chr3_1:91624396-91624415 Msa0387590:intron 25.0%
!! GATTTTACAATTCTAATGTG+AGG + chr3_1:91624710-91624729 None:intergenic 25.0%
!!! TTTTCTAGTCAGATTCTTTT+GGG - chr3_1:91624863-91624882 Msa0387590:intron 25.0%
!! TATTTTGCCAAGAAACTTAA+AGG - chr3_1:91625058-91625077 Msa0387590:intron 25.0%
!! GCAACAATATCATATTTTCT+TGG + chr3_1:91625133-91625152 None:intergenic 25.0%
! TCTGTTGTGAATTTATTGAT+TGG - chr3_1:91625206-91625225 Msa0387590:intron 25.0%
! TTGATTCTCATGATCAAATA+AGG - chr3_1:91625308-91625327 Msa0387590:CDS 25.0%
!!! AGCTCTTTTTTTTTTCTGAT+GGG + chr3_1:91625436-91625455 None:intergenic 25.0%
!!! AAGCTCTTTTTTTTTTCTGA+TGG + chr3_1:91625437-91625456 None:intergenic 25.0%
! CTTATGATTCAAAAATCAAG+AGG + chr3_1:91625494-91625513 None:intergenic 25.0%
! ATGAATTGTAATGATAATCC+TGG + chr3_1:91625603-91625622 None:intergenic 25.0%
! TTTGTAATCTGTGGTAAAAT+TGG - chr3_1:91626005-91626024 Msa0387590:intron 25.0%
! TTTAAACCTTTAGTTGAATC+AGG - chr3_1:91626087-91626106 Msa0387590:CDS 25.0%
! TTAAACCTTTAGTTGAATCA+GGG - chr3_1:91626088-91626107 Msa0387590:CDS 25.0%
! TTAAAAAAAATTGCGGAAGA+GGG + chr3_1:91626255-91626274 None:intergenic 25.0%
! ATTAAAAAAAATTGCGGAAG+AGG + chr3_1:91626256-91626275 None:intergenic 25.0%
! AGTAACATGTTAAATCAAGT+GGG - chr3_1:91626315-91626334 Msa0387590:intron 25.0%
!!! CGAAATTTTAACAATTTGCA+CGG - chr3_1:91626902-91626921 Msa0387590:five_prime_UTR 25.0%
! ATGCCTACAAAATTAAAGAA+CGG - chr3_1:91626950-91626969 Msa0387590:five_prime_UTR 25.0%
!!! ATTCCGTTCTTTAATTTTGT+AGG + chr3_1:91626956-91626975 None:intergenic 25.0%
! TTAGGTGGATAGTTAGTTTA+TGG - chr3_1:91614618-91614637 Msa0387590:three_prime_UTR 30.0%
ATCTCATTCTCTTCTTCAAT+TGG + chr3_1:91614860-91614879 None:intergenic 30.0%
TAAATCAGAAACGATGACAT+CGG + chr3_1:91614897-91614916 None:intergenic 30.0%
TAATTTACTACCTCGTAAAG+GGG + chr3_1:91615218-91615237 None:intergenic 30.0%
AAATCAGAACACTACGTTAA+TGG + chr3_1:91615341-91615360 None:intergenic 30.0%
!! CTGATTTTCACTTTTATCCA+AGG - chr3_1:91615354-91615373 Msa0387590:intron 30.0%
!! ACTTTGGAATTTAAACTCCT+TGG + chr3_1:91615374-91615393 None:intergenic 30.0%
!! GACGAATATAGTTCTAACTT+TGG + chr3_1:91615390-91615409 None:intergenic 30.0%
TACACTTATCGTAAAATGTG+AGG - chr3_1:91615464-91615483 Msa0387590:intron 30.0%
TTATCGTAAAATGTGAGGAT+TGG - chr3_1:91615469-91615488 Msa0387590:intron 30.0%
GTATTTGCGTTAATGGAAAT+TGG + chr3_1:91615518-91615537 None:intergenic 30.0%
TCCATTAACGCAAATACAAA+TGG - chr3_1:91615521-91615540 Msa0387590:intron 30.0%
TCCATTTGTATTTGCGTTAA+TGG + chr3_1:91615525-91615544 None:intergenic 30.0%
ATTAACGCAAATACAAATGG+AGG - chr3_1:91615524-91615543 Msa0387590:intron 30.0%
AAATGTGTATGTACCATGAT+CGG + chr3_1:91615577-91615596 None:intergenic 30.0%
TACATACAAAATTCCTTGCT+AGG + chr3_1:91615764-91615783 None:intergenic 30.0%
!! GAATTTCCGCCTTTTTAAAA+TGG - chr3_1:91615845-91615864 Msa0387590:intron 30.0%
!! ATACAGCCATTTTAAAAAGG+CGG + chr3_1:91615854-91615873 None:intergenic 30.0%
AGATGCAAGAGAATAAAAAG+GGG + chr3_1:91616383-91616402 None:intergenic 30.0%
GAGATGCAAGAGAATAAAAA+GGG + chr3_1:91616384-91616403 None:intergenic 30.0%
AGAGATGCAAGAGAATAAAA+AGG + chr3_1:91616385-91616404 None:intergenic 30.0%
TTGTGCTAAACTAGTATTTG+AGG + chr3_1:91616603-91616622 None:intergenic 30.0%
CATCAGATTTATGTCCAAAA+AGG + chr3_1:91616894-91616913 None:intergenic 30.0%
ATGCATTATGTTGTCATATG+TGG - chr3_1:91617250-91617269 Msa0387590:intron 30.0%
ATTATGTTGTCATATGTGGT+TGG - chr3_1:91617254-91617273 Msa0387590:intron 30.0%
CATTAGATGCAAAGTTTATG+AGG + chr3_1:91617317-91617336 None:intergenic 30.0%
CTCATAAACTTTGCATCTAA+TGG - chr3_1:91617315-91617334 Msa0387590:intron 30.0%
!! ACTTTGAAGTGGTATTAGAA+GGG + chr3_1:91617428-91617447 None:intergenic 30.0%
!! AACTTTGAAGTGGTATTAGA+AGG + chr3_1:91617429-91617448 None:intergenic 30.0%
! ATGAGTACAAAACTTTGAAG+TGG + chr3_1:91617439-91617458 None:intergenic 30.0%
TAAATACTTTGCAATGCTTC+AGG + chr3_1:91617782-91617801 None:intergenic 30.0%
TTACATCATCTAGGAATTTG+TGG + chr3_1:91617813-91617832 None:intergenic 30.0%
ACAAATTCCTAGATGATGTA+AGG - chr3_1:91617812-91617831 Msa0387590:intron 30.0%
AAAGTTACCTTACATCATCT+AGG + chr3_1:91617822-91617841 None:intergenic 30.0%
! AAGGTAACTTTTGTGTTAAC+AGG - chr3_1:91617831-91617850 Msa0387590:intron 30.0%
GAAATATCAAGTGAACCAAT+AGG + chr3_1:91617933-91617952 None:intergenic 30.0%
! ATTGGTTCACTTGATATTTC+TGG - chr3_1:91617933-91617952 Msa0387590:intron 30.0%
TTGGTTCACTTGATATTTCT+GGG - chr3_1:91617934-91617953 Msa0387590:intron 30.0%
TCGAGTTACAGAATATTCAA+AGG - chr3_1:91617983-91618002 Msa0387590:CDS 30.0%
TAGGTATACTACAAACTCAT+AGG + chr3_1:91618391-91618410 None:intergenic 30.0%
AAGAGATCCAAAAAAACCTA+TGG - chr3_1:91618799-91618818 Msa0387590:intron 30.0%
AGAGATCCAAAAAAACCTAT+GGG - chr3_1:91618800-91618819 Msa0387590:intron 30.0%
!!! TTATCACCCATAGGTTTTTT+TGG + chr3_1:91618809-91618828 None:intergenic 30.0%
AAAAAAACCTATGGGTGATA+AGG - chr3_1:91618808-91618827 Msa0387590:intron 30.0%
ATAAAAACCTTATCACCCAT+AGG + chr3_1:91618818-91618837 None:intergenic 30.0%
! CTGTTTAACTTTCATGTCTT+TGG - chr3_1:91618848-91618867 Msa0387590:intron 30.0%
TATCAAAACCAAAAACCAGA+AGG + chr3_1:91618919-91618938 None:intergenic 30.0%
! AGTATTGCAGATGTTATTTG+CGG + chr3_1:91619105-91619124 None:intergenic 30.0%
GAATTCATACTTCTCTTGTA+TGG + chr3_1:91619214-91619233 None:intergenic 30.0%
TAAGATTCTTAAGGAAGGAA+AGG + chr3_1:91619343-91619362 None:intergenic 30.0%
!!! GCTTTTAAGATTCTTAAGGA+AGG + chr3_1:91619348-91619367 None:intergenic 30.0%
!!! AGCTGCTTTTAAGATTCTTA+AGG + chr3_1:91619352-91619371 None:intergenic 30.0%
TGCTTTATATTCAAGACTTG+GGG + chr3_1:91619535-91619554 None:intergenic 30.0%
CTGCTTTATATTCAAGACTT+GGG + chr3_1:91619536-91619555 None:intergenic 30.0%
ACTGCTTTATATTCAAGACT+TGG + chr3_1:91619537-91619556 None:intergenic 30.0%
AAGTCTTGAATATAAAGCAG+TGG - chr3_1:91619536-91619555 Msa0387590:intron 30.0%
TTGTGTCACCTGAATATTAA+AGG - chr3_1:91619794-91619813 Msa0387590:intron 30.0%
!! CATATCTCTAGAATGTAAAG+AGG + chr3_1:91619963-91619982 None:intergenic 30.0%
AGATATGCATTTGAATTCTG+TGG - chr3_1:91619976-91619995 Msa0387590:intron 30.0%
TTAAAAATTTATACGAGGCC+AGG + chr3_1:91620101-91620120 None:intergenic 30.0%
GCCTTCAAATATTGATACTA+TGG - chr3_1:91620317-91620336 Msa0387590:CDS 30.0%
!!! AGTTCTAATCACCAGTTTTT+TGG - chr3_1:91620349-91620368 Msa0387590:CDS 30.0%
!!! GTTCTAATCACCAGTTTTTT+GGG - chr3_1:91620350-91620369 Msa0387590:CDS 30.0%
TGATAAATTAGTTGCTTCAC+AGG - chr3_1:91620665-91620684 Msa0387590:intron 30.0%
CATTGAAATTATATAGTGCC+TGG + chr3_1:91620775-91620794 None:intergenic 30.0%
CAGGCACTATATAATTTCAA+TGG - chr3_1:91620773-91620792 Msa0387590:CDS 30.0%
ACAAATATGACAACAAACCT+TGG + chr3_1:91620831-91620850 None:intergenic 30.0%
GTTGTCATATTTGTGAAGTT+TGG - chr3_1:91620837-91620856 Msa0387590:CDS 30.0%
AATGTTTGTTTACATTCGGT+TGG - chr3_1:91620966-91620985 Msa0387590:intron 30.0%
AGGTTATAGATGAAGAAAGA+AGG - chr3_1:91620997-91621016 Msa0387590:intron 30.0%
GGTTATAGATGAAGAAAGAA+GGG - chr3_1:91620998-91621017 Msa0387590:intron 30.0%
CATTATGGTTTGACATAATG+AGG - chr3_1:91621049-91621068 Msa0387590:CDS 30.0%
! ATGCATTTTCAAAGTGCAAT+AGG - chr3_1:91621093-91621112 Msa0387590:intron 30.0%
! ATTTTCAGACTCTTCAAACT+TGG + chr3_1:91621212-91621231 None:intergenic 30.0%
TGGAAGAAATTGAATTTGGT+TGG - chr3_1:91621342-91621361 Msa0387590:intron 30.0%
GGAAGAAATTGAATTTGGTT+GGG - chr3_1:91621343-91621362 Msa0387590:intron 30.0%
GAAGAAATTGAATTTGGTTG+GGG - chr3_1:91621344-91621363 Msa0387590:intron 30.0%
TCATTAAAGACCATCAATGT+AGG - chr3_1:91621410-91621429 Msa0387590:intron 30.0%
!! AGGATTATTGTTTCTAGCAA+GGG + chr3_1:91621488-91621507 None:intergenic 30.0%
!! AAGGATTATTGTTTCTAGCA+AGG + chr3_1:91621489-91621508 None:intergenic 30.0%
GGTAATAATTATTTCCCATG+TGG - chr3_1:91621517-91621536 Msa0387590:intron 30.0%
TAATTATTTCCCATGTGGAT+TGG - chr3_1:91621522-91621541 Msa0387590:intron 30.0%
AACACTAGAGAAACTCTTAT+TGG - chr3_1:91621606-91621625 Msa0387590:CDS 30.0%
!! AGAAACTCTTATTGGTCTTT+AGG - chr3_1:91621614-91621633 Msa0387590:CDS 30.0%
ATGAATTCTGATATAGGTTG+TGG - chr3_1:91621919-91621938 Msa0387590:intron 30.0%
!! CTTCATGTTCTCTTTTTAGT+TGG + chr3_1:91621961-91621980 None:intergenic 30.0%
TATAATAGTCCTAAGACCAT+CGG - chr3_1:91622047-91622066 Msa0387590:CDS 30.0%
!!! AACACTTTTGGAACAAGTTA+TGG - chr3_1:91622084-91622103 Msa0387590:CDS 30.0%
TGTTGTTGTACCTACTTTAT+CGG + chr3_1:91622248-91622267 None:intergenic 30.0%
TAAAGTAGGTACAACAACAA+AGG - chr3_1:91622249-91622268 Msa0387590:CDS 30.0%
AAAATAGGCTTAGGAAGTTT+GGG + chr3_1:91622461-91622480 None:intergenic 30.0%
!! TAGAAAAGATGGTGGAAAAT+AGG + chr3_1:91622476-91622495 None:intergenic 30.0%
! ATTCCAGTCAATTATTTTCC+CGG - chr3_1:91622697-91622716 Msa0387590:intron 30.0%
TCCATCATTATTTCCTTCTT+TGG - chr3_1:91622752-91622771 Msa0387590:intron 30.0%
CCATCATTATTTCCTTCTTT+GGG - chr3_1:91622753-91622772 Msa0387590:intron 30.0%
TCTTGTTAAATAGGACGATT+GGG + chr3_1:91622870-91622889 None:intergenic 30.0%
!! CTTGACTTGTCTTGTTAAAT+AGG + chr3_1:91622879-91622898 None:intergenic 30.0%
CTATTTAACAAGACAAGTCA+AGG - chr3_1:91622877-91622896 Msa0387590:intron 30.0%
!! TTGTTGTTATGGTTTTCTAC+AGG - chr3_1:91623073-91623092 Msa0387590:intron 30.0%
!! TAGAAGTATAAGCATTGACA+TGG + chr3_1:91623171-91623190 None:intergenic 30.0%
!! GTTGCTTATCTTTGTTGTTA+CGG - chr3_1:91623344-91623363 Msa0387590:intron 30.0%
TAATATCTGACATCATTGTG+AGG - chr3_1:91623378-91623397 Msa0387590:intron 30.0%
!! TTAGCTATGTGCTATTGTTT+TGG - chr3_1:91623434-91623453 Msa0387590:intron 30.0%
! ACTTTCTTAGATTTTGCATG+GGG + chr3_1:91623487-91623506 None:intergenic 30.0%
! CAACTTTCTTAGATTTTGCA+TGG + chr3_1:91623489-91623508 None:intergenic 30.0%
TGCAAAATCTAAGAAAGTTG+AGG - chr3_1:91623489-91623508 Msa0387590:intron 30.0%
AATCATCATTTGTCATCCAT+GGG + chr3_1:91623529-91623548 None:intergenic 30.0%
AAATCATCATTTGTCATCCA+TGG + chr3_1:91623530-91623549 None:intergenic 30.0%
ATGGATGACAAATGATGATT+TGG - chr3_1:91623529-91623548 Msa0387590:intron 30.0%
GTCTCAAAACTGTAGAAATT+TGG - chr3_1:91623559-91623578 Msa0387590:intron 30.0%
GTTACACTTAATCAAATTGC+AGG + chr3_1:91623698-91623717 None:intergenic 30.0%
TGATATTCTGATCATATGGA+AGG + chr3_1:91623720-91623739 None:intergenic 30.0%
CAACAAAGAGAAAAAGTAAC+AGG - chr3_1:91623826-91623845 Msa0387590:CDS 30.0%
ACAAAGAGAAAAAGTAACAG+GGG - chr3_1:91623828-91623847 Msa0387590:CDS 30.0%
! ATTTTCAGCATTTGATAAGG+TGG + chr3_1:91623915-91623934 None:intergenic 30.0%
! ATTTCATTAGTTTACAAGGG+GGG + chr3_1:91624045-91624064 None:intergenic 30.0%
! ATATAATTTTTCTACTGGGG+AGG - chr3_1:91624255-91624274 Msa0387590:intron 30.0%
! TATAATTTTTCTACTGGGGA+GGG - chr3_1:91624256-91624275 Msa0387590:intron 30.0%
AACTGAATAGCCATTATTCA+CGG + chr3_1:91624301-91624320 None:intergenic 30.0%
AACATTGATGCCTATTGTTT+AGG - chr3_1:91624460-91624479 Msa0387590:intron 30.0%
!!! GTTCAACAAGTTTTTGAGTT+TGG - chr3_1:91624615-91624634 Msa0387590:intron 30.0%
AAATCATGAATGATGGTCAA+TGG - chr3_1:91624731-91624750 Msa0387590:intron 30.0%
!! GTTTTCTAGTCAGATTCTTT+TGG - chr3_1:91624862-91624881 Msa0387590:intron 30.0%
ATGCTAATCTAAACAATCAC+TGG + chr3_1:91624933-91624952 None:intergenic 30.0%
! GACAGCTATTTGTTAATTGT+AGG + chr3_1:91625342-91625361 None:intergenic 30.0%
AGCTGTCATTCTTCTATATT+TGG - chr3_1:91625355-91625374 Msa0387590:CDS 30.0%
!!! TTTTTTTTTTCTGATGGGTG+GGG + chr3_1:91625431-91625450 None:intergenic 30.0%
!!! CTTTTTTTTTTCTGATGGGT+GGG + chr3_1:91625432-91625451 None:intergenic 30.0%
!!! TCTTTTTTTTTTCTGATGGG+TGG + chr3_1:91625433-91625452 None:intergenic 30.0%
GATATATGTGATGCAATTGA+AGG - chr3_1:91625807-91625826 Msa0387590:intron 30.0%
TGACATTCCAAATGTAAGTT+AGG - chr3_1:91625836-91625855 Msa0387590:intron 30.0%
GACATTCCAAATGTAAGTTA+GGG - chr3_1:91625837-91625856 Msa0387590:intron 30.0%
ATGTAAAAGCAAAGGAAAGA+GGG + chr3_1:91625971-91625990 None:intergenic 30.0%
TAAACATTAGCACATCTTCT+AGG - chr3_1:91626040-91626059 Msa0387590:intron 30.0%
AACATCTCTTACATTCCATA+TGG + chr3_1:91626069-91626088 None:intergenic 30.0%
TAAACCTTTAGTTGAATCAG+GGG - chr3_1:91626089-91626108 Msa0387590:CDS 30.0%
TTTCCTCCTCCAAAATATAT+CGG - chr3_1:91626289-91626308 Msa0387590:intron 30.0%
GAGTAACATGTTAAATCAAG+TGG - chr3_1:91626314-91626333 Msa0387590:intron 30.0%
GTAACATGTTAAATCAAGTG+GGG - chr3_1:91626316-91626335 Msa0387590:intron 30.0%
TTATCAGTACATCTTCAACA+AGG + chr3_1:91626388-91626407 None:intergenic 30.0%
!! GGTACTCAAAAAGTATCTAT+CGG + chr3_1:91626589-91626608 None:intergenic 30.0%
!! TTTGCATTTTGCTATCTTCA+AGG + chr3_1:91626610-91626629 None:intergenic 30.0%
!!! AGAAGAATTGGTTTTACTAG+TGG - chr3_1:91626775-91626794 Msa0387590:CDS 30.0%
GCATATATATCGCTGTTCTT+TGG - chr3_1:91615169-91615188 Msa0387590:intron 35.0%
AATTTACTACCTCGTAAAGG+GGG + chr3_1:91615217-91615236 None:intergenic 35.0%
!!! TCTTAGGGAGCACTTTATTT+TGG - chr3_1:91615435-91615454 Msa0387590:intron 35.0%
TGCGTTAATGGAAATTGGTT+GGG + chr3_1:91615513-91615532 None:intergenic 35.0%
TTGCGTTAATGGAAATTGGT+TGG + chr3_1:91615514-91615533 None:intergenic 35.0%
TGGAGGATTTCATCCAAATT+TGG - chr3_1:91615541-91615560 Msa0387590:intron 35.0%
AAGGCGGAAATTCATAACTA+AGG + chr3_1:91615838-91615857 None:intergenic 35.0%
!!! GCAAAGCAGAGCAATTTTTT+TGG - chr3_1:91615999-91616018 Msa0387590:intron 35.0%
!! TCTTTGGCTTGAAAGTAACA+TGG - chr3_1:91616196-91616215 Msa0387590:intron 35.0%
TTGCGTAGAAAGGATATACA+GGG - chr3_1:91616334-91616353 Msa0387590:intron 35.0%
AGAATAAAAAGGGGCTTCAT+AGG + chr3_1:91616374-91616393 None:intergenic 35.0%
! TGTTACTCTTCGAAAGCATA+TGG - chr3_1:91616476-91616495 Msa0387590:intron 35.0%
CTGTCAGACAGTTGAATATT+AGG + chr3_1:91616697-91616716 None:intergenic 35.0%
!!! TTTTTTAGGCCCATAGCTTT+TGG + chr3_1:91616768-91616787 None:intergenic 35.0%
TATTTATTTAAGTGGGGGGT+GGG + chr3_1:91616805-91616824 None:intergenic 35.0%
TTATTTATTTAAGTGGGGGG+TGG + chr3_1:91616806-91616825 None:intergenic 35.0%
! TAGACTCAAGTTCTCCTTTT+TGG - chr3_1:91616877-91616896 Msa0387590:intron 35.0%
GTGATTATACAAATTGAGGG+TGG + chr3_1:91616925-91616944 None:intergenic 35.0%
! ATTTACCTAACAGTGTCGTT+TGG + chr3_1:91617056-91617075 None:intergenic 35.0%
!!! CTCGGCTCTCTTTTTAAAAT+AGG + chr3_1:91617199-91617218 None:intergenic 35.0%
TTGTCATATGTGGTTGGATA+TGG - chr3_1:91617260-91617279 Msa0387590:intron 35.0%
TAGAAAACTTGCCATCAATG+AGG + chr3_1:91617629-91617648 None:intergenic 35.0%
TGGTTCTTAACAGATTCATG+TGG - chr3_1:91617705-91617724 Msa0387590:intron 35.0%
!!! CTCTTTTTATTTTAGGCAGC+TGG - chr3_1:91617863-91617882 Msa0387590:intron 35.0%
ATATGCTTGTTTGCTTGACA+AGG - chr3_1:91618058-91618077 Msa0387590:CDS 35.0%
TGTACAAGGAAGTTATTACG+TGG - chr3_1:91618472-91618491 Msa0387590:intron 35.0%
AACTGACATCCCAAATATGT+TGG + chr3_1:91618722-91618741 None:intergenic 35.0%
AATGTATCTATTGGTCCTTC+TGG - chr3_1:91618901-91618920 Msa0387590:intron 35.0%
TGCTATTCAAGCACATCATT+TGG - chr3_1:91618948-91618967 Msa0387590:intron 35.0%
CAGACAAATGAAAGACAAGT+TGG + chr3_1:91618996-91619015 None:intergenic 35.0%
GTAGATTGTGATTGTCCATT+AGG - chr3_1:91619019-91619038 Msa0387590:intron 35.0%
! GTCTATTTTCTGCATGCAAT+GGG + chr3_1:91619070-91619089 None:intergenic 35.0%
TTATTTGCGGACAATTGGAA+AGG + chr3_1:91619092-91619111 None:intergenic 35.0%
! AGATGTTATTTGCGGACAAT+TGG + chr3_1:91619097-91619116 None:intergenic 35.0%
CATACCTGCATCATATCTAA+CGG - chr3_1:91619137-91619156 Msa0387590:intron 35.0%
TCTATAATCCTCCTTTGCAT+GGG + chr3_1:91619165-91619184 None:intergenic 35.0%
TTCTATAATCCTCCTTTGCA+TGG + chr3_1:91619166-91619185 None:intergenic 35.0%
CTGAACTGCTTCAAAGATAA+AGG + chr3_1:91619256-91619275 None:intergenic 35.0%
!! CTTTATCTTTGAAGCAGTTC+AGG - chr3_1:91619254-91619273 Msa0387590:intron 35.0%
AATCAGTTTCCTTCGGTTAT+TGG - chr3_1:91619392-91619411 Msa0387590:intron 35.0%
GATAAAACTGTAACTGATGC+TGG + chr3_1:91619474-91619493 None:intergenic 35.0%
TTATGTTACGAAACTCACCT+TGG - chr3_1:91619596-91619615 Msa0387590:intron 35.0%
CAAAGAATTTGGAGATGTAC+CGG + chr3_1:91619769-91619788 None:intergenic 35.0%
! TGTGTTTGTGTCACTGATAT+TGG - chr3_1:91619818-91619837 Msa0387590:intron 35.0%
TGGTCTGTGATACTTCATTT+GGG - chr3_1:91619885-91619904 Msa0387590:intron 35.0%
TAATCTTCAAGCTCTGCATA+TGG - chr3_1:91620003-91620022 Msa0387590:intron 35.0%
AATCTTCAAGCTCTGCATAT+GGG - chr3_1:91620004-91620023 Msa0387590:intron 35.0%
AAAGGAGTGATACATGAAGA+TGG - chr3_1:91620173-91620192 Msa0387590:CDS 35.0%
AGTGATACATGAAGATGGTT+TGG - chr3_1:91620178-91620197 Msa0387590:CDS 35.0%
! ATATGATGCTACTGTTGCTT+TGG - chr3_1:91620265-91620284 Msa0387590:CDS 35.0%
AAAACTTTCTCTCACTCTTG+AGG - chr3_1:91620383-91620402 Msa0387590:intron 35.0%
AAGGGACCAAGTTATTCTTT+AGG - chr3_1:91620461-91620480 Msa0387590:intron 35.0%
AGGGACCAAGTTATTCTTTA+GGG - chr3_1:91620462-91620481 Msa0387590:intron 35.0%
CTAGACCCTAAAGAATAACT+TGG + chr3_1:91620470-91620489 None:intergenic 35.0%
TAATTTCAATGGCTCTTCCT+TGG - chr3_1:91620784-91620803 Msa0387590:CDS 35.0%
!!! TGGTTAGAGTTTTAAGGAAG+TGG - chr3_1:91620937-91620956 Msa0387590:intron 35.0%
!!! GGTTAGAGTTTTAAGGAAGT+GGG - chr3_1:91620938-91620957 Msa0387590:intron 35.0%
!!! GTTAGAGTTTTAAGGAAGTG+GGG - chr3_1:91620939-91620958 Msa0387590:intron 35.0%
ACATTCGGTTGGAAGTTATA+AGG - chr3_1:91620977-91620996 Msa0387590:intron 35.0%
TTGAAGAGTCTGAAAATCAG+AGG - chr3_1:91621215-91621234 Msa0387590:intron 35.0%
! GTTAGGAAAGAAGTGTAGAT+TGG - chr3_1:91621322-91621341 Msa0387590:intron 35.0%
AAGACCATCAATGTAGGTTT+AGG - chr3_1:91621416-91621435 Msa0387590:intron 35.0%
!! CTTTAGGTACTGACAATAGA+AGG - chr3_1:91621630-91621649 Msa0387590:CDS 35.0%
! TAGTGACGTGAGTGATATTT+TGG - chr3_1:91621690-91621709 Msa0387590:CDS 35.0%
TTGTCAATGGCCATGAATTT+AGG + chr3_1:91621995-91622014 None:intergenic 35.0%
! AGTTGGCAGTAAAACACTTT+TGG - chr3_1:91622072-91622091 Msa0387590:CDS 35.0%
GAAAATAGGCTTAGGAAGTT+TGG + chr3_1:91622462-91622481 None:intergenic 35.0%
! TCCACCATCTTTTCTACTAT+AGG - chr3_1:91622480-91622499 Msa0387590:intron 35.0%
ACCTATAGTAGAAAAGATGG+TGG + chr3_1:91622484-91622503 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGA+TGG + chr3_1:91622487-91622506 None:intergenic 35.0%
ACAGCATTAGAAAGAGAGTT+GGG + chr3_1:91622512-91622531 None:intergenic 35.0%
GATGTGTAGTAAGACTAGAT+GGG + chr3_1:91622549-91622568 None:intergenic 35.0%
AGAGATGATGAATGTTGTGT+TGG + chr3_1:91622571-91622590 None:intergenic 35.0%
TTTCCGGGAAAATAATTGAC+TGG + chr3_1:91622703-91622722 None:intergenic 35.0%
!! AACTTAATGGATTGCAGATG+AGG + chr3_1:91622733-91622752 None:intergenic 35.0%
CCCAAAGAAGGAAATAATGA+TGG + chr3_1:91622756-91622775 None:intergenic 35.0%
CGATTGGGAAAATTCAAAAC+TGG + chr3_1:91622855-91622874 None:intergenic 35.0%
! GTCTTGTTAAATAGGACGAT+TGG + chr3_1:91622871-91622890 None:intergenic 35.0%
AGCATACATCTCATATGCAT+AGG + chr3_1:91622953-91622972 None:intergenic 35.0%
CAATGATGTCAGATATTACC+TGG + chr3_1:91623376-91623395 None:intergenic 35.0%
ATCATCATTTGTCATCCATG+GGG + chr3_1:91623528-91623547 None:intergenic 35.0%
TCAGGTTAGGATCAAATAGT+TGG - chr3_1:91623617-91623636 Msa0387590:CDS 35.0%
TGATTACAAAGTCATGTCCA+AGG + chr3_1:91623672-91623691 None:intergenic 35.0%
ATCAAAATGGCGTATATTGG+CGG + chr3_1:91623755-91623774 None:intergenic 35.0%
CAAAGAGAAAAAGTAACAGG+GGG - chr3_1:91623829-91623848 Msa0387590:CDS 35.0%
AACAGATAATTTCACGTGCA+TGG - chr3_1:91623971-91623990 Msa0387590:intron 35.0%
TCATTTATAGTCATACCGAG+AGG - chr3_1:91624114-91624133 Msa0387590:intron 35.0%
TTGAGGTAAACAACACACTA+AGG + chr3_1:91624168-91624187 None:intergenic 35.0%
!! TAGTGTGTTGTTTACCTCAA+AGG - chr3_1:91624168-91624187 Msa0387590:intron 35.0%
TTAATGAGATAGAAGGGTCA+TGG - chr3_1:91624402-91624421 Msa0387590:intron 35.0%
ATGCCTATTGTTTAGGAATG+TGG - chr3_1:91624467-91624486 Msa0387590:intron 35.0%
TCTCCACATTCCTAAACAAT+AGG + chr3_1:91624473-91624492 None:intergenic 35.0%
TGTGGAGAAATAACAGCAAA+TGG - chr3_1:91624485-91624504 Msa0387590:intron 35.0%
AAATCATGAATGATGGTCAG+TGG - chr3_1:91624815-91624834 Msa0387590:intron 35.0%
! TCTTGGCAAAATAGCTCTTT+TGG + chr3_1:91625051-91625070 None:intergenic 35.0%
! GGTTAGTCCTTTAAGTTTCT+TGG + chr3_1:91625068-91625087 None:intergenic 35.0%
CAAACTTAAAGGACCAAAAG+AGG - chr3_1:91625100-91625119 Msa0387590:intron 35.0%
! TCTTGGCAAAATACCTCTTT+TGG + chr3_1:91625116-91625135 None:intergenic 35.0%
! TTAGTATTTTCTCCTTTGCC+AGG - chr3_1:91625582-91625601 Msa0387590:intron 35.0%
TGTAATGATAATCCTGGCAA+AGG + chr3_1:91625597-91625616 None:intergenic 35.0%
! AGTGACAATTTTCGAAGCAA+TGG + chr3_1:91625786-91625805 None:intergenic 35.0%
ATTGCTTCGAAAATTGTCAC+TGG - chr3_1:91625785-91625804 Msa0387590:intron 35.0%
ATATGTGATGCAATTGAAGG+TGG - chr3_1:91625810-91625829 Msa0387590:intron 35.0%
AAATTGGGATGACAACTCAA+AGG + chr3_1:91625906-91625925 None:intergenic 35.0%
GATGTAAAAGCAAAGGAAAG+AGG + chr3_1:91625972-91625991 None:intergenic 35.0%
GATTACAAACATGTCACGAT+CGG + chr3_1:91625994-91626013 None:intergenic 35.0%
! CATTTTACAACCATCTCTGA+GGG + chr3_1:91626200-91626219 None:intergenic 35.0%
CTCAGAGATGGTTGTAAAAT+GGG - chr3_1:91626199-91626218 Msa0387590:intron 35.0%
TTCCTCCTCCAAAATATATC+GGG - chr3_1:91626290-91626309 Msa0387590:intron 35.0%
GGATGCATATCTAGAAGAAT+TGG - chr3_1:91626763-91626782 Msa0387590:CDS 35.0%
TTTACTAGTGGTTCAGTTGA+AGG - chr3_1:91626787-91626806 Msa0387590:CDS 35.0%
! GGTGGATAGTTAGTTTATGG+AGG - chr3_1:91614621-91614640 Msa0387590:three_prime_UTR 40.0%
TGGAGGAAATTAGCGTAGTT+TGG - chr3_1:91614638-91614657 Msa0387590:three_prime_UTR 40.0%
GGAGGAAATTAGCGTAGTTT+GGG - chr3_1:91614639-91614658 Msa0387590:three_prime_UTR 40.0%
GAGGAAATTAGCGTAGTTTG+GGG - chr3_1:91614640-91614659 Msa0387590:three_prime_UTR 40.0%
AGGAAATTAGCGTAGTTTGG+GGG - chr3_1:91614641-91614660 Msa0387590:three_prime_UTR 40.0%
GATCGAAACAACGCAAAACT+TGG - chr3_1:91614714-91614733 Msa0387590:three_prime_UTR 40.0%
ATGGATGGAATGGAATGGAA+TGG + chr3_1:91614773-91614792 None:intergenic 40.0%
ATTCCATTCCATTCCATCCA+TGG - chr3_1:91614772-91614791 Msa0387590:three_prime_UTR 40.0%
ATTCCAATTGACAGTGATGG+AGG + chr3_1:91615123-91615142 None:intergenic 40.0%
CAGATTCCAATTGACAGTGA+TGG + chr3_1:91615126-91615145 None:intergenic 40.0%
!!! ATGTGAGGATTGGTTTTCTG+AGG - chr3_1:91615479-91615498 Msa0387590:intron 40.0%
CGGAGGCAAATTTCCAAATT+TGG + chr3_1:91615557-91615576 None:intergenic 40.0%
TGCACAATTATGCTTGTCTG+TGG - chr3_1:91615886-91615905 Msa0387590:CDS 40.0%
ACCTGTCAACAGTCAAATGA+GGG + chr3_1:91616064-91616083 None:intergenic 40.0%
AACCTGTCAACAGTCAAATG+AGG + chr3_1:91616065-91616084 None:intergenic 40.0%
TCTCTGATGCACTTCTTCTT+TGG - chr3_1:91616180-91616199 Msa0387590:intron 40.0%
ACATGGAAAATTTGGAGACG+CGG - chr3_1:91616213-91616232 Msa0387590:intron 40.0%
CGCAAGATTCAGCTAAACAA+TGG + chr3_1:91616319-91616338 None:intergenic 40.0%
TAGCTGAATCTTGCGTAGAA+AGG - chr3_1:91616324-91616343 Msa0387590:intron 40.0%
CTTGCGTAGAAAGGATATAC+AGG - chr3_1:91616333-91616352 Msa0387590:intron 40.0%
AAAAAGGGGCTTCATAGGAT+AGG + chr3_1:91616369-91616388 None:intergenic 40.0%
CTCTTGCATCTCTAAACAAC+AGG - chr3_1:91616392-91616411 Msa0387590:intron 40.0%
GTTAGGTTTCGGTAATATGG+TGG + chr3_1:91616426-91616445 None:intergenic 40.0%
GCAGTTAGGTTTCGGTAATA+TGG + chr3_1:91616429-91616448 None:intergenic 40.0%
TATTCAACTGTCTGACAGTC+AGG - chr3_1:91616699-91616718 Msa0387590:intron 40.0%
CAAATCCAAACGACACTGTT+AGG - chr3_1:91617048-91617067 Msa0387590:CDS 40.0%
! AAAGTCTTGTGGTAACTGTG+AGG + chr3_1:91617222-91617241 None:intergenic 40.0%
TCACAGTTACCACAAGACTT+TGG - chr3_1:91617221-91617240 Msa0387590:intron 40.0%
ATATGTGGTTGGATATGGCA+GGG - chr3_1:91617265-91617284 Msa0387590:intron 40.0%
AGGATTGCGAGTTAAGAAGT+AGG + chr3_1:91617297-91617316 None:intergenic 40.0%
! ACTTTGCATCTAATGGACAC+AGG - chr3_1:91617322-91617341 Msa0387590:intron 40.0%
TAGAAGGGTAGAAGGAGATT+GGG + chr3_1:91617413-91617432 None:intergenic 40.0%
TTAGAAGGGTAGAAGGAGAT+TGG + chr3_1:91617414-91617433 None:intergenic 40.0%
AGTGGTATTAGAAGGGTAGA+AGG + chr3_1:91617421-91617440 None:intergenic 40.0%
AGGACAGAGCCAGAATTTAA+TGG + chr3_1:91617609-91617628 None:intergenic 40.0%
! ATGTGGAACTTTTGCCTTTG+TGG - chr3_1:91617722-91617741 Msa0387590:intron 40.0%
!! GTGCTCTGAAAATTGAACCA+AGG + chr3_1:91617899-91617918 None:intergenic 40.0%
GCACTGAATATTCTCCCTAT+TGG - chr3_1:91617915-91617934 Msa0387590:intron 40.0%
! ATAGTGACTTGCAACATCTC+AGG - chr3_1:91617958-91617977 Msa0387590:CDS 40.0%
AGTAAGAATCCACTTACTCC+AGG - chr3_1:91618220-91618239 Msa0387590:intron 40.0%
! GAAAAGCTTAAACTTGCTCC+TGG + chr3_1:91618241-91618260 None:intergenic 40.0%
AGACTTACTCTCAGAGTAAG+TGG - chr3_1:91618507-91618526 Msa0387590:intron 40.0%
GCAGACACTACATATTGTTG+GGG + chr3_1:91618535-91618554 None:intergenic 40.0%
CGCAGACACTACATATTGTT+GGG + chr3_1:91618536-91618555 None:intergenic 40.0%
GTCTGCGCAAAATGAATAGA+CGG - chr3_1:91618549-91618568 Msa0387590:intron 40.0%
GACATTATGGAAAGCTACGA+AGG + chr3_1:91618579-91618598 None:intergenic 40.0%
!! GGGTGCTGCATTTGATTTTT+GGG - chr3_1:91618685-91618704 Msa0387590:intron 40.0%
!! TGCTGCATTTGATTTTTGGG+AGG - chr3_1:91618688-91618707 Msa0387590:intron 40.0%
!! CATTTGATTTTTGGGAGGCT+GGG - chr3_1:91618693-91618712 Msa0387590:intron 40.0%
!! ATTTGATTTTTGGGAGGCTG+GGG - chr3_1:91618694-91618713 Msa0387590:intron 40.0%
!!! CTATTGGTCCTTCTGGTTTT+TGG - chr3_1:91618908-91618927 Msa0387590:intron 40.0%
TGATGTGCTTGAATAGCAGT+AGG + chr3_1:91618946-91618965 None:intergenic 40.0%
! GGTCTATTTTCTGCATGCAA+TGG + chr3_1:91619071-91619090 None:intergenic 40.0%
!! TATCTTTGAAGCAGTTCAGG+AGG - chr3_1:91619257-91619276 Msa0387590:intron 40.0%
ATGCTGTTAATTGCTTCAGC+CGG - chr3_1:91619316-91619335 Msa0387590:intron 40.0%
TTCTTAAGGAAGGAAAGGAC+CGG + chr3_1:91619338-91619357 None:intergenic 40.0%
TCAGGACAATCAGTTTCCTT+CGG - chr3_1:91619385-91619404 Msa0387590:intron 40.0%
GTAACTGATGCTGGAATTAG+AGG + chr3_1:91619465-91619484 None:intergenic 40.0%
GTGGTCTGTGATACTTCATT+TGG - chr3_1:91619884-91619903 Msa0387590:intron 40.0%
!! CTTTGCTCAGCTATTTCTGA+TGG - chr3_1:91619926-91619945 Msa0387590:intron 40.0%
AAACATGTCAAGGGATCACA+AGG + chr3_1:91620296-91620315 None:intergenic 40.0%
TTGTGATCCCTTGACATGTT+TGG - chr3_1:91620295-91620314 Msa0387590:CDS 40.0%
TTGAAGGCCAAACATGTCAA+GGG + chr3_1:91620305-91620324 None:intergenic 40.0%
TTTGAAGGCCAAACATGTCA+AGG + chr3_1:91620306-91620325 None:intergenic 40.0%
!!! AGAGCTACTTTTTGTCCTTG+TGG - chr3_1:91620488-91620507 Msa0387590:intron 40.0%
!!! GAGCTACTTTTTGTCCTTGT+GGG - chr3_1:91620489-91620508 Msa0387590:intron 40.0%
!!! AGCTACTTTTTGTCCTTGTG+GGG - chr3_1:91620490-91620509 Msa0387590:intron 40.0%
CATTTACAACTGTCCTTGAG+GGG + chr3_1:91620553-91620572 None:intergenic 40.0%
CCATTTACAACTGTCCTTGA+GGG + chr3_1:91620554-91620573 None:intergenic 40.0%
ACCATTTACAACTGTCCTTG+AGG + chr3_1:91620555-91620574 None:intergenic 40.0%
TTGAAGAATCTATGCCTGAG+AGG - chr3_1:91620734-91620753 Msa0387590:intron 40.0%
TGAAGAATCTATGCCTGAGA+GGG - chr3_1:91620735-91620754 Msa0387590:intron 40.0%
TGACACATCAAGCATTTCCA+AGG + chr3_1:91620804-91620823 None:intergenic 40.0%
TGGTTTGACATAATGAGGAC+AGG - chr3_1:91621054-91621073 Msa0387590:CDS 40.0%
GGTTTGACATAATGAGGACA+GGG - chr3_1:91621055-91621074 Msa0387590:CDS 40.0%
TCATGTAAGGAGGAAAAGCA+AGG + chr3_1:91621287-91621306 None:intergenic 40.0%
ATGCAGTTCTTCATGTAAGG+AGG + chr3_1:91621297-91621316 None:intergenic 40.0%
AGCATGCAGTTCTTCATGTA+AGG + chr3_1:91621300-91621319 None:intergenic 40.0%
! AAAGCACTTAGAGAGAAGGA+AGG + chr3_1:91621374-91621393 None:intergenic 40.0%
TTCCTTCTCTCTAAGTGCTT+TGG - chr3_1:91621373-91621392 Msa0387590:intron 40.0%
! TTCCAAAGCACTTAGAGAGA+AGG + chr3_1:91621378-91621397 None:intergenic 40.0%
GTCTTTAATGACGTCAATGC+AGG + chr3_1:91621401-91621420 None:intergenic 40.0%
ACCATCAATGTAGGTTTAGG+TGG - chr3_1:91621419-91621438 Msa0387590:intron 40.0%
TCCACCTAAACCTACATTGA+TGG + chr3_1:91621423-91621442 None:intergenic 40.0%
GTAGGTTTAGGTGGAATGTT+AGG - chr3_1:91621428-91621447 Msa0387590:intron 40.0%
TAAGAAGCTCCAATCCACAT+GGG + chr3_1:91621534-91621553 None:intergenic 40.0%
ATAAGAAGCTCCAATCCACA+TGG + chr3_1:91621535-91621554 None:intergenic 40.0%
!! TGTGGATTGGAGCTTCTTAT+TGG - chr3_1:91621535-91621554 Msa0387590:CDS 40.0%
AGCTTCTTATTGGTCGCTAA+GGG - chr3_1:91621545-91621564 Msa0387590:CDS 40.0%
AAAGAGAACATGAAGCGAGA+AGG - chr3_1:91621966-91621985 Msa0387590:CDS 40.0%
! TTTTACTGCCAACTTTCCGA+TGG + chr3_1:91622066-91622085 None:intergenic 40.0%
TTTGTAGGGACCGATAAAGT+AGG - chr3_1:91622235-91622254 Msa0387590:CDS 40.0%
AAAGGCTTATCCCACTAAGT+GGG - chr3_1:91622267-91622286 Msa0387590:CDS 40.0%
CGTAATTTGATCCATGTAGC+TGG + chr3_1:91622294-91622313 None:intergenic 40.0%
GTCCTTGCTACATAATCTAC+AGG - chr3_1:91622420-91622439 Msa0387590:CDS 40.0%
GACCTGTAGATTATGTAGCA+AGG + chr3_1:91622425-91622444 None:intergenic 40.0%
!! AGATGGTGGAAAATAGGCTT+AGG + chr3_1:91622470-91622489 None:intergenic 40.0%
CAGCATTAGAAAGAGAGTTG+GGG + chr3_1:91622511-91622530 None:intergenic 40.0%
GACAGCATTAGAAAGAGAGT+TGG + chr3_1:91622513-91622532 None:intergenic 40.0%
GGATGTGTAGTAAGACTAGA+TGG + chr3_1:91622550-91622569 None:intergenic 40.0%
GCTTACTTTATTCTCGCGTT+GGG - chr3_1:91622596-91622615 Msa0387590:intron 40.0%
TTTATTCTCGCGTTGGGTAT+AGG - chr3_1:91622602-91622621 Msa0387590:intron 40.0%
TTATTCTCGCGTTGGGTATA+GGG - chr3_1:91622603-91622622 Msa0387590:intron 40.0%
!! AATGGATTGCAGATGAGGAA+TGG + chr3_1:91622728-91622747 None:intergenic 40.0%
!! TTGTTGTTACGGTTTTCTCC+AGG - chr3_1:91623355-91623374 Msa0387590:intron 40.0%
TTTGGTTGAGCTTTCATTGC+TGG - chr3_1:91623577-91623596 Msa0387590:CDS 40.0%
TTGGTTGAGCTTTCATTGCT+GGG - chr3_1:91623578-91623597 Msa0387590:CDS 40.0%
TCCTCTTCTTAACTCAGGTT+AGG - chr3_1:91623604-91623623 Msa0387590:CDS 40.0%
TCCTAACCTGAGTTAAGAAG+AGG + chr3_1:91623608-91623627 None:intergenic 40.0%
! TACTGCTACTTAGTACTCCT+CGG - chr3_1:91623790-91623809 Msa0387590:intron 40.0%
! GTTGCTAGTATTTGTTACCG+AGG + chr3_1:91623810-91623829 None:intergenic 40.0%
GTCAGCAATCAATCACTGTA+AGG + chr3_1:91623893-91623912 None:intergenic 40.0%
! ATTAGTTTACAAGGGGGGAT+GGG + chr3_1:91624040-91624059 None:intergenic 40.0%
ATACATAGAAGACAGCCTCT+CGG + chr3_1:91624132-91624151 None:intergenic 40.0%
AATAGCCATTATTCACGGAG+AGG + chr3_1:91624296-91624315 None:intergenic 40.0%
TGCAGTTGCAAGCAAAAGTA+AGG + chr3_1:91624437-91624456 None:intergenic 40.0%
! TGAGACGCTAACATTTTCTG+TGG - chr3_1:91625465-91625484 Msa0387590:intron 40.0%
ATTTGACCTTTCCATACGCA+GGG - chr3_1:91625621-91625640 Msa0387590:intron 40.0%
GTACTGCCCTAACTTACATT+TGG + chr3_1:91625846-91625865 None:intergenic 40.0%
AGGGCAGTACTATCTTTCTT+CGG - chr3_1:91625856-91625875 Msa0387590:intron 40.0%
ACGATCGGATGTAAAAGCAA+AGG + chr3_1:91625979-91625998 None:intergenic 40.0%
CGTGACATGTTTGTAATCTG+TGG - chr3_1:91625996-91626015 Msa0387590:intron 40.0%
!! ACATCTTCTAGGACACCATA+TGG - chr3_1:91626051-91626070 Msa0387590:intron 40.0%
CTAACACCTCAAGTGTACTT+TGG + chr3_1:91626127-91626146 None:intergenic 40.0%
!! AGCTTAGTCTTGTAACCTCA+AGG - chr3_1:91626159-91626178 Msa0387590:intron 40.0%
AATTTGAACTCAGTGCCTTG+AGG + chr3_1:91626177-91626196 None:intergenic 40.0%
AGTTCAAATTCCCTCAGAGA+TGG - chr3_1:91626187-91626206 Msa0387590:intron 40.0%
! CCATTTTACAACCATCTCTG+AGG + chr3_1:91626201-91626220 None:intergenic 40.0%
CCTCAGAGATGGTTGTAAAA+TGG - chr3_1:91626198-91626217 Msa0387590:intron 40.0%
TCCTCCTCCAAAATATATCG+GGG - chr3_1:91626291-91626310 Msa0387590:intron 40.0%
! GTTACTCCCCCGATATATTT+TGG + chr3_1:91626301-91626320 None:intergenic 40.0%
! GTGGGGCATTTATTTGAACA+TGG - chr3_1:91626333-91626352 Msa0387590:intron 40.0%
ATAAGCAGAGATCATCGAGT+GGG + chr3_1:91626363-91626382 None:intergenic 40.0%
TATTTCATGCGCATAAGCCT+TGG - chr3_1:91626445-91626464 Msa0387590:CDS 40.0%
!!! CGCATAAGCCTTGGTTTTTT+GGG - chr3_1:91626454-91626473 Msa0387590:intron 40.0%
!!! ATAAGCCTTGGTTTTTTGGG+AGG - chr3_1:91626457-91626476 Msa0387590:intron 40.0%
!!! TAAGCCTTGGTTTTTTGGGA+GGG - chr3_1:91626458-91626477 Msa0387590:intron 40.0%
AAAACCCTCCCAAAAAACCA+AGG + chr3_1:91626465-91626484 None:intergenic 40.0%
TTCTGTTTCACGTTGTCTAC+AGG - chr3_1:91626526-91626545 Msa0387590:intron 40.0%
CGAAAATCTCACTAGAACAG+TGG - chr3_1:91626722-91626741 Msa0387590:CDS 40.0%
CCGAGTAAGCGTATATTCAT+GGG + chr3_1:91626983-91627002 None:intergenic 40.0%
CCCATGAATATACGCTTACT+CGG - chr3_1:91626980-91626999 Msa0387590:five_prime_UTR 40.0%
TCCGAGTAAGCGTATATTCA+TGG + chr3_1:91626984-91627003 None:intergenic 40.0%
! TTGCGTTGTTTCGATCGATC+TGG + chr3_1:91614710-91614729 None:intergenic 45.0%
TGAAACCTCCATGGATGGAA+TGG + chr3_1:91614783-91614802 None:intergenic 45.0%
CACCACTCTTTGTATTTCCG+AGG - chr3_1:91614974-91614993 Msa0387590:intron 45.0%
TTGCTCTCTATGTCGCTCTT+AGG - chr3_1:91615419-91615438 Msa0387590:intron 45.0%
TGCTCTCTATGTCGCTCTTA+GGG - chr3_1:91615420-91615439 Msa0387590:intron 45.0%
!!! GGGAGCACTTTATTTTGGAG+TGG - chr3_1:91615440-91615459 Msa0387590:intron 45.0%
TGGAAATTTGCCTCCGATCA+TGG - chr3_1:91615561-91615580 Msa0387590:intron 45.0%
TGTGTATGTACCATGATCGG+AGG + chr3_1:91615574-91615593 None:intergenic 45.0%
!! TATGTATCGGCTACCTAGCA+AGG - chr3_1:91615748-91615767 Msa0387590:CDS 45.0%
ACCCTCATTTGACTGTTGAC+AGG - chr3_1:91616060-91616079 Msa0387590:intron 45.0%
GAAGCAGAAGACAACTGCAA+TGG - chr3_1:91616239-91616258 Msa0387590:intron 45.0%
CACTGATGGCAGTTAGGTTT+CGG + chr3_1:91616437-91616456 None:intergenic 45.0%
ACACATCACTGATGGCAGTT+AGG + chr3_1:91616443-91616462 None:intergenic 45.0%
! TCGAAAGCATATGGCACAGA+TGG - chr3_1:91616485-91616504 Msa0387590:intron 45.0%
! TTTAGGCCCATAGCTTTTGG+AGG + chr3_1:91616765-91616784 None:intergenic 45.0%
GTGGAAAAGGGGAAAACGAA+TGG + chr3_1:91617015-91617034 None:intergenic 45.0%
! CGTTTTCCCCTTTTCCACAA+CGG - chr3_1:91617017-91617036 Msa0387590:CDS 45.0%
CAGTTACCACAAGACTTTGG+TGG - chr3_1:91617224-91617243 Msa0387590:intron 45.0%
CATATGTGGTTGGATATGGC+AGG - chr3_1:91617264-91617283 Msa0387590:intron 45.0%
! AGAAGGAGATTGGGGCATTA+GGG + chr3_1:91617404-91617423 None:intergenic 45.0%
! TAGAAGGAGATTGGGGCATT+AGG + chr3_1:91617405-91617424 None:intergenic 45.0%
AGAAGGGTAGAAGGAGATTG+GGG + chr3_1:91617412-91617431 None:intergenic 45.0%
TTACCTGCAGCAAACCACAA+AGG + chr3_1:91617739-91617758 None:intergenic 45.0%
!!! TTATTTTAGGCAGCTGGCTG+AGG - chr3_1:91617869-91617888 Msa0387590:intron 45.0%
ATTGCTTGCTTTCTCCAGAG+AGG - chr3_1:91618113-91618132 Msa0387590:CDS 45.0%
! AAACTTGCTCCTGGAGTAAG+TGG + chr3_1:91618232-91618251 None:intergenic 45.0%
GCGCAGACACTACATATTGT+TGG + chr3_1:91618537-91618556 None:intergenic 45.0%
!!! GGGGTGCTGCATTTGATTTT+TGG - chr3_1:91618684-91618703 Msa0387590:intron 45.0%
!! GCATTTGATTTTTGGGAGGC+TGG - chr3_1:91618692-91618711 Msa0387590:intron 45.0%
!! GAAGTGCAGAGGCATCATTA+TGG + chr3_1:91618747-91618766 None:intergenic 45.0%
GGATCCGTTAGATATGATGC+AGG + chr3_1:91619144-91619163 None:intergenic 45.0%
! ATCTAACGGATCCCATGCAA+AGG - chr3_1:91619151-91619170 Msa0387590:intron 45.0%
AGCACTTCTCCAATAACCGA+AGG + chr3_1:91619404-91619423 None:intergenic 45.0%
!! GTTATTGGAGAAGTGCTCTC+TGG - chr3_1:91619407-91619426 Msa0387590:intron 45.0%
TGTTACGAAACTCACCTTGG+AGG - chr3_1:91619599-91619618 Msa0387590:intron 45.0%
GTTACGAAACTCACCTTGGA+GGG - chr3_1:91619600-91619619 Msa0387590:intron 45.0%
GAAGAACTGATGTCAGTGGT+AGG - chr3_1:91619622-91619641 Msa0387590:intron 45.0%
! GTCAGTGGTAGGTGTTTTCA+TGG - chr3_1:91619633-91619652 Msa0387590:intron 45.0%
AGAATTTGGAGATGTACCGG+AGG + chr3_1:91619766-91619785 None:intergenic 45.0%
!! TGCTCAGCTATTTCTGATGG+TGG - chr3_1:91619929-91619948 Msa0387590:intron 45.0%
ACAACTCAGTGGTAACCTCA+AGG - chr3_1:91620513-91620532 Msa0387590:intron 45.0%
CAACTCAGTGGTAACCTCAA+GGG - chr3_1:91620514-91620533 Msa0387590:intron 45.0%
GATTTGAACACCATCCCTTG+AGG + chr3_1:91620531-91620550 None:intergenic 45.0%
ATGGTGTTCAAATCCCCTCA+AGG - chr3_1:91620537-91620556 Msa0387590:intron 45.0%
CCCTCAAGGACAGTTGTAAA+TGG - chr3_1:91620551-91620570 Msa0387590:intron 45.0%
TATATAGTGCCTGGTCAACC+AGG + chr3_1:91620766-91620785 None:intergenic 45.0%
!!! GAGTTTTAAGGAAGTGGGGT+TGG - chr3_1:91620943-91620962 Msa0387590:intron 45.0%
GAAGAACTGCATGCTGAGTT+AGG - chr3_1:91621305-91621324 Msa0387590:intron 45.0%
GAGCTTCTTATTGGTCGCTA+AGG - chr3_1:91621544-91621563 Msa0387590:CDS 45.0%
GAGAAGGCAGCCTAAATTCA+TGG - chr3_1:91621982-91622001 Msa0387590:CDS 45.0%
TCCTAAGACCATCGGAAAGT+TGG - chr3_1:91622055-91622074 Msa0387590:CDS 45.0%
CAAAGGCTTATCCCACTAAG+TGG - chr3_1:91622266-91622285 Msa0387590:CDS 45.0%
AAGGCTTATCCCACTAAGTG+GGG - chr3_1:91622268-91622287 Msa0387590:CDS 45.0%
TGTAGCAAGGACAGTAGATG+TGG + chr3_1:91622412-91622431 None:intergenic 45.0%
CGCTTACTTTATTCTCGCGT+TGG - chr3_1:91622595-91622614 Msa0387590:intron 45.0%
AGATGAGGAATGGCATTTCC+GGG + chr3_1:91622718-91622737 None:intergenic 45.0%
CAGATGAGGAATGGCATTTC+CGG + chr3_1:91622719-91622738 None:intergenic 45.0%
AAGAGCTATGCAAGAGCTGT+TGG - chr3_1:91622819-91622838 Msa0387590:intron 45.0%
CCAACGAACAGCTGGAAAAT+TGG + chr3_1:91622977-91622996 None:intergenic 45.0%
! CCAATTTTCCAGCTGTTCGT+TGG - chr3_1:91622974-91622993 Msa0387590:intron 45.0%
! GGGGAATTTGAAGCTTGACA+TGG + chr3_1:91623468-91623487 None:intergenic 45.0%
AATGGCGTATATTGGCGGTT+TGG + chr3_1:91623750-91623769 None:intergenic 45.0%
! GGAGTACTAAGTAGCAGTAG+AGG + chr3_1:91623789-91623808 None:intergenic 45.0%
AGAGAAAAAGTAACAGGGGG+TGG - chr3_1:91623832-91623851 Msa0387590:CDS 45.0%
GAGAAAAAGTAACAGGGGGT+GGG - chr3_1:91623833-91623852 Msa0387590:CDS 45.0%
AGAAAAAGTAACAGGGGGTG+GGG - chr3_1:91623834-91623853 Msa0387590:CDS 45.0%
ATAATTTCACGTGCATGGCC+AGG - chr3_1:91623976-91623995 Msa0387590:intron 45.0%
! CATTAGTTTACAAGGGGGGA+TGG + chr3_1:91624041-91624060 None:intergenic 45.0%
TTGCTCAGTTTCAGCCTTTG+AGG + chr3_1:91624185-91624204 None:intergenic 45.0%
GTCTTGCAACTGTCATCTTC+TGG - chr3_1:91624213-91624232 Msa0387590:intron 45.0%
CATTTGACCTTTCCATACGC+AGG - chr3_1:91625620-91625639 Msa0387590:intron 45.0%
CGAAGTTTCTTTGTAGCCCA+AGG + chr3_1:91625647-91625666 None:intergenic 45.0%
!! CGTTTTACATGCTGCTTCAG+AGG - chr3_1:91625665-91625684 Msa0387590:intron 45.0%
GTGTCCCCTGATTCAACTAA+AGG + chr3_1:91626096-91626115 None:intergenic 45.0%
ACTCCTCCAAAGTACACTTG+AGG - chr3_1:91626118-91626137 Msa0387590:intron 45.0%
ACACCTCAAGTGTACTTTGG+AGG + chr3_1:91626124-91626143 None:intergenic 45.0%
CCTCCTCCAAAATATATCGG+GGG - chr3_1:91626292-91626311 Msa0387590:intron 45.0%
!! ACTCCCCCGATATATTTTGG+AGG + chr3_1:91626298-91626317 None:intergenic 45.0%
TAAGCAGAGATCATCGAGTG+GGG + chr3_1:91626362-91626381 None:intergenic 45.0%
CATAAGCAGAGATCATCGAG+TGG + chr3_1:91626364-91626383 None:intergenic 45.0%
!!! GCGCATAAGCCTTGGTTTTT+TGG - chr3_1:91626453-91626472 Msa0387590:intron 45.0%
!! AGGGTTTTAGTCCTACCACT+GGG - chr3_1:91626477-91626496 Msa0387590:intron 45.0%
ATCGGTGCATGTAGAAACAC+TGG - chr3_1:91626683-91626702 Msa0387590:CDS 45.0%
TAGAAACACTGGTGCTTGTG+TGG - chr3_1:91626694-91626713 Msa0387590:CDS 45.0%
TCTCACTAGAACAGTGGTGA+AGG - chr3_1:91626728-91626747 Msa0387590:CDS 45.0%
CTAGAACAGTGGTGAAGGAA+AGG - chr3_1:91626733-91626752 Msa0387590:CDS 45.0%
! TGGTGAAGGAAAGGCTTTAG+TGG - chr3_1:91626742-91626761 Msa0387590:CDS 45.0%
!!! CAATATAATTTTATTATTTT+GGG + chr3_1:91621669-91621688 None:intergenic 5.0%
!!! TCAATATAATTTTATTATTT+TGG + chr3_1:91621670-91621689 None:intergenic 5.0%
!!! TATTTTATTTTATTTTTGAA+TGG - chr3_1:91625532-91625551 Msa0387590:CDS 5.0%
!! AAAAATATTAAAAAAAATTG+CGG + chr3_1:91626262-91626281 None:intergenic 5.0%
CCTCCATGGATGGAATGGAA+TGG + chr3_1:91614778-91614797 None:intergenic 50.0%
CCATTCCATTCCATCCATGG+AGG - chr3_1:91614775-91614794 Msa0387590:three_prime_UTR 50.0%
GAGAGTGAAACCTCCATGGA+TGG + chr3_1:91614788-91614807 None:intergenic 50.0%
GTCTGAGAGTGAAACCTCCA+TGG + chr3_1:91614792-91614811 None:intergenic 50.0%
AGCTGTTAGTGCAAACGAGG+AGG + chr3_1:91614826-91614845 None:intergenic 50.0%
CCTCGTTTGCACTAACAGCT+CGG - chr3_1:91614826-91614845 Msa0387590:CDS 50.0%
AGTGGTGAATGAGCCTGTTG+CGG + chr3_1:91614961-91614980 None:intergenic 50.0%
GGCCTCGGAAATACAAAGAG+TGG + chr3_1:91614979-91614998 None:intergenic 50.0%
TATTTCCGAGGCCTTCTCAG+TGG - chr3_1:91614986-91615005 Msa0387590:intron 50.0%
ACCTGAAGCTTCCACTGAGA+AGG + chr3_1:91615000-91615019 None:intergenic 50.0%
! CCAATTGACAGTGATGGAGG+CGG + chr3_1:91615120-91615139 None:intergenic 50.0%
! AAGGGGGAGGACATTTTGAG+TGG + chr3_1:91615201-91615220 None:intergenic 50.0%
AAATGTCCTCCCCCTTTACG+AGG - chr3_1:91615205-91615224 Msa0387590:intron 50.0%
TTACTACCTCGTAAAGGGGG+AGG + chr3_1:91615214-91615233 None:intergenic 50.0%
! TTTCCCCTTTTCCACAACGG+AGG - chr3_1:91617020-91617039 Msa0387590:CDS 50.0%
ACTCCTCCGTTGTGGAAAAG+GGG + chr3_1:91617026-91617045 None:intergenic 50.0%
CACTCCTCCGTTGTGGAAAA+GGG + chr3_1:91617027-91617046 None:intergenic 50.0%
TCACTCCTCCGTTGTGGAAA+AGG + chr3_1:91617028-91617047 None:intergenic 50.0%
GATTTGTCACTCCTCCGTTG+TGG + chr3_1:91617034-91617053 None:intergenic 50.0%
CTTGTGGTAACTGTGAGGCT+CGG + chr3_1:91617217-91617236 None:intergenic 50.0%
CATGCTCCACCAAAGTCTTG+TGG + chr3_1:91617233-91617252 None:intergenic 50.0%
!! TCTGGCTCTGTCCTCATTGA+TGG - chr3_1:91617615-91617634 Msa0387590:intron 50.0%
!! TTGCCTTTGTGGTTTGCTGC+AGG - chr3_1:91617733-91617752 Msa0387590:intron 50.0%
! GCTGGGGTGCCAACATATTT+GGG - chr3_1:91618710-91618729 Msa0387590:intron 50.0%
! GGCAAAGATTGGAAGTGCAG+AGG + chr3_1:91618758-91618777 None:intergenic 50.0%
! TAACGGATCCCATGCAAAGG+AGG - chr3_1:91619154-91619173 Msa0387590:intron 50.0%
!! CTTTGAAGCAGTTCAGGAGG+TGG - chr3_1:91619260-91619279 Msa0387590:intron 50.0%
TGGTATCACAACAGGGCTAG+AGG + chr3_1:91619496-91619515 None:intergenic 50.0%
TAGCCCTGTTGTGATACCAC+CGG - chr3_1:91619497-91619516 Msa0387590:intron 50.0%
! GTACCGGTGGTATCACAACA+GGG + chr3_1:91619503-91619522 None:intergenic 50.0%
TCAAGACTTGGGGTCTTCTC+TGG + chr3_1:91619525-91619544 None:intergenic 50.0%
GACATCAGTTCTTCCCTCCA+AGG + chr3_1:91619616-91619635 None:intergenic 50.0%
GAGGGAAGAACTGATGTCAG+TGG - chr3_1:91619618-91619637 Msa0387590:intron 50.0%
CTTCAAGCTCTGCATATGGG+TGG - chr3_1:91620007-91620026 Msa0387590:intron 50.0%
TCAGTGGTAACCTCAAGGGA+TGG - chr3_1:91620518-91620537 Msa0387590:intron 50.0%
GCTTGATGTGTCAGACACCA+AGG - chr3_1:91620811-91620830 Msa0387590:CDS 50.0%
TCTAGCAAGGGACAGATTGC+TGG + chr3_1:91621476-91621495 None:intergenic 50.0%
TGGGGGAAAGATGCTTCTCT+GGG - chr3_1:91621849-91621868 Msa0387590:intron 50.0%
! GGAAAGATGCTTCTCTGGGA+TGG - chr3_1:91621853-91621872 Msa0387590:intron 50.0%
!! TGCTTCTCTGGGATGGTTGA+AGG - chr3_1:91621860-91621879 Msa0387590:intron 50.0%
GCCAACTTTCCGATGGTCTT+AGG + chr3_1:91622059-91622078 None:intergenic 50.0%
AGCAAGGACAGTAGATGTGG+AGG + chr3_1:91622409-91622428 None:intergenic 50.0%
GTCTTGGCTTAGCCCAAAGA+AGG + chr3_1:91622768-91622787 None:intergenic 50.0%
GCTATGCAAGAGCTGTTGGT+CGG - chr3_1:91622823-91622842 Msa0387590:intron 50.0%
ACAGAAGACCAACGAACAGC+TGG + chr3_1:91622985-91623004 None:intergenic 50.0%
ACACACAGAGCAGAAGACCA+AGG + chr3_1:91623271-91623290 None:intergenic 50.0%
GGCTTGAAAGAGTAACCCCA+TGG - chr3_1:91623510-91623529 Msa0387590:intron 50.0%
GGCTGTCCTCTTCTTAACTC+AGG - chr3_1:91623599-91623618 Msa0387590:CDS 50.0%
CTTGGTCGCTATGCATCTTG+AGG - chr3_1:91623999-91624018 Msa0387590:intron 50.0%
GGGTACCTCTCCGTGAATAA+TGG - chr3_1:91624288-91624307 Msa0387590:intron 50.0%
GATAGAAGGGTCATGGAGAG+TGG - chr3_1:91624409-91624428 Msa0387590:intron 50.0%
! CACTTGAGGTGTTAGCTCAG+TGG - chr3_1:91626132-91626151 Msa0387590:intron 50.0%
!! CCCCCGATATATTTTGGAGG+AGG + chr3_1:91626295-91626314 None:intergenic 50.0%
AAGCAGAGATCATCGAGTGG+GGG + chr3_1:91626361-91626380 None:intergenic 50.0%
!! GAGGGTTTTAGTCCTACCAC+TGG - chr3_1:91626476-91626495 Msa0387590:intron 50.0%
ATCAGAGTACACCCAGTGGT+AGG + chr3_1:91626491-91626510 None:intergenic 50.0%
TCACATCAGAGTACACCCAG+TGG + chr3_1:91626495-91626514 None:intergenic 50.0%
TCGATCTGGCGCATGGATAC+CGG + chr3_1:91614696-91614715 None:intergenic 55.0%
GTTTCGATCGATCTGGCGCA+TGG + chr3_1:91614703-91614722 None:intergenic 55.0%
CCGAGCTGTTAGTGCAAACG+AGG + chr3_1:91614829-91614848 None:intergenic 55.0%
GCGGTGTGCGTGAAGTTTGA+TGG + chr3_1:91614942-91614961 None:intergenic 55.0%
AACTTCACGCACACCGCAAC+AGG - chr3_1:91614945-91614964 Msa0387590:CDS 55.0%
AGCTTCCACTGAGAAGGCCT+CGG + chr3_1:91614994-91615013 None:intergenic 55.0%
GCCTTCTCAGTGGAAGCTTC+AGG - chr3_1:91614996-91615015 Msa0387590:intron 55.0%
CCGCCTCCATCACTGTCAAT+TGG - chr3_1:91615117-91615136 Msa0387590:intron 55.0%
AACTGTCTGACAGTCAGGCC+TGG - chr3_1:91616704-91616723 Msa0387590:intron 55.0%
! TGCAAGGTGCTCAACCAAGC+CGG - chr3_1:91616738-91616757 Msa0387590:intron 55.0%
! GGCTGGGGTGCCAACATATT+TGG - chr3_1:91618709-91618728 Msa0387590:intron 55.0%
!! GGTACCGGTGGTATCACAAC+AGG + chr3_1:91619504-91619523 None:intergenic 55.0%
CTTGGGGTCTTCTCTGGTAC+CGG + chr3_1:91619519-91619538 None:intergenic 55.0%
CCATGGCAGATTTGAGCCTC+CGG - chr3_1:91619747-91619766 Msa0387590:intron 55.0%
TCTGCATATGGGTGGCTGCA+TGG - chr3_1:91620015-91620034 Msa0387590:intron 55.0%
CTGCATATGGGTGGCTGCAT+GGG - chr3_1:91620016-91620035 Msa0387590:intron 55.0%
TCCTTGTGGGGACAACTCAG+TGG - chr3_1:91620502-91620521 Msa0387590:intron 55.0%
ACCACTGAGTTGTCCCCACA+AGG + chr3_1:91620506-91620525 None:intergenic 55.0%
ATGCCTGAGAGGGACATACC+TGG - chr3_1:91620745-91620764 Msa0387590:CDS 55.0%
CAACCAGGTATGTCCCTCTC+AGG + chr3_1:91620751-91620770 None:intergenic 55.0%
AGGGACATACCTGGTTGACC+AGG - chr3_1:91620754-91620773 Msa0387590:CDS 55.0%
!!! TTTTTGGGGGTGCTGCTGTC+TGG - chr3_1:91621802-91621821 Msa0387590:intron 55.0%
CCCACGACAGTCCCAAGAAA+CGG + chr3_1:91621833-91621852 None:intergenic 55.0%
CCGTTTCTTGGGACTGTCGT+GGG - chr3_1:91621830-91621849 Msa0387590:intron 55.0%
CGTTTCTTGGGACTGTCGTG+GGG - chr3_1:91621831-91621850 Msa0387590:intron 55.0%
GTTTCTTGGGACTGTCGTGG+GGG - chr3_1:91621832-91621851 Msa0387590:intron 55.0%
GTGGGGGAAAGATGCTTCTC+TGG - chr3_1:91621848-91621867 Msa0387590:intron 55.0%
TGTAGCTGGCCCCACTTAGT+GGG + chr3_1:91622280-91622299 None:intergenic 55.0%
ATGTAGCTGGCCCCACTTAG+TGG + chr3_1:91622281-91622300 None:intergenic 55.0%
ACTAAGTGGGGCCAGCTACA+TGG - chr3_1:91622280-91622299 Msa0387590:CDS 55.0%
AGATGCATAGCGACCAAGCC+TGG + chr3_1:91623997-91624016 None:intergenic 55.0%
TACTGGGGAGGGATGAGACA+TGG - chr3_1:91624267-91624286 Msa0387590:intron 55.0%
ACTGGGGAGGGATGAGACAT+GGG - chr3_1:91624268-91624287 Msa0387590:intron 55.0%
CTTTCCATACGCAGGGCCTT+GGG - chr3_1:91625628-91625647 Msa0387590:intron 55.0%
ATCGTCTACGAGTCCCTGGA+GGG + chr3_1:91626665-91626684 None:intergenic 55.0%
TCCAGGGACTCGTAGACGAT+CGG - chr3_1:91626665-91626684 Msa0387590:CDS 55.0%
! TGACAGTCAGGCCTGGCCTT+GGG - chr3_1:91616711-91616730 Msa0387590:intron 60.0%
! GCAAGGTGCTCAACCAAGCC+GGG - chr3_1:91616739-91616758 Msa0387590:intron 60.0%
!! TAGCTTTTGGAGGCCCGGCT+TGG + chr3_1:91616755-91616774 None:intergenic 60.0%
AGCCGGGCCTCCAAAAGCTA+TGG - chr3_1:91616755-91616774 Msa0387590:intron 60.0%
GCCGGGCCTCCAAAAGCTAT+GGG - chr3_1:91616756-91616775 Msa0387590:intron 60.0%
!! GCCCATAGCTTTTGGAGGCC+CGG + chr3_1:91616760-91616779 None:intergenic 60.0%
CAGCTGGCTGAGGAAAGCCT+TGG - chr3_1:91617879-91617898 Msa0387590:intron 60.0%
CCGGAGGCTCAAATCTGCCA+TGG + chr3_1:91619750-91619769 None:intergenic 60.0%
TGTCTGGCCAGGCCGTTTCT+TGG - chr3_1:91621818-91621837 Msa0387590:intron 60.0%
GTCTGGCCAGGCCGTTTCTT+GGG - chr3_1:91621819-91621838 Msa0387590:intron 60.0%
GACAGTCCCAAGAAACGGCC+TGG + chr3_1:91621828-91621847 None:intergenic 60.0%
GCCGTTTCTTGGGACTGTCG+TGG - chr3_1:91621829-91621848 Msa0387590:intron 60.0%
CAGGGGGTGGGGTTGCAATA+TGG - chr3_1:91623845-91623864 Msa0387590:intron 60.0%
TTCACGTGCATGGCCAGGCT+TGG - chr3_1:91623981-91624000 Msa0387590:intron 60.0%
CCAAGGCCCTGCGTATGGAA+AGG + chr3_1:91625630-91625649 None:intergenic 60.0%
CCTTTCCATACGCAGGGCCT+TGG - chr3_1:91625627-91625646 Msa0387590:intron 60.0%
TCGTCTACGAGTCCCTGGAG+GGG + chr3_1:91626664-91626683 None:intergenic 60.0%
GATCGTCTACGAGTCCCTGG+AGG + chr3_1:91626666-91626685 None:intergenic 60.0%
ACCGATCGTCTACGAGTCCC+TGG + chr3_1:91626669-91626688 None:intergenic 60.0%
CTGACAGTCAGGCCTGGCCT+TGG - chr3_1:91616710-91616729 Msa0387590:intron 65.0%
!! GACAGTCAGGCCTGGCCTTG+GGG - chr3_1:91616712-91616731 Msa0387590:intron 65.0%
!! ACAGTCAGGCCTGGCCTTGG+GGG - chr3_1:91616713-91616732 Msa0387590:intron 65.0%
GAGCACCTTGCACTCCCCCA+AGG + chr3_1:91616730-91616749 None:intergenic 65.0%
! GGGGTCTTCTCTGGTACCGG+TGG + chr3_1:91619516-91619535 None:intergenic 65.0%
GTAGCCCAAGGCCCTGCGTA+TGG + chr3_1:91625635-91625654 None:intergenic 65.0%
AATCTCCCAGTCCCCCCTCC+AGG - chr3_1:91626648-91626667 Msa0387590:CDS 65.0%
ATCTCCCAGTCCCCCCTCCA+GGG - chr3_1:91626649-91626668 Msa0387590:CDS 65.0%
GTCTACGAGTCCCTGGAGGG+GGG + chr3_1:91626662-91626681 None:intergenic 65.0%
CGTCTACGAGTCCCTGGAGG+GGG + chr3_1:91626663-91626682 None:intergenic 65.0%
CCTTGCACTCCCCCAAGGCC+AGG + chr3_1:91616725-91616744 None:intergenic 70.0%
!! CCTGGCCTTGGGGGAGTGCA+AGG - chr3_1:91616722-91616741 Msa0387590:intron 70.0%
GAGTCCCTGGAGGGGGGACT+GGG + chr3_1:91626656-91626675 None:intergenic 70.0%
!! GGGGGTGCTGCTGTCTGGCC+AGG - chr3_1:91621807-91621826 Msa0387590:intron 75.0%
CGAGTCCCTGGAGGGGGGAC+TGG + chr3_1:91626657-91626676 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 91614567 91627004 91614567 ID=Msa0387590;Name=Msa0387590
chr3_1 mRNA 91614567 91627004 91614567 ID=Msa0387590-mRNA-1;Parent=Msa0387590;Name=Msa0387590-mRNA-1;_AED=0.17;_eAED=0.17;_QI=107|0.82|0.88|1|1|1|18|243|1002
chr3_1 exon 91614567 91614989 91614567 ID=Msa0387590-mRNA-1:exon:25555;Parent=Msa0387590-mRNA-1
chr3_1 exon 91615723 91615791 91615723 ID=Msa0387590-mRNA-1:exon:25554;Parent=Msa0387590-mRNA-1
chr3_1 exon 91615885 91615929 91615885 ID=Msa0387590-mRNA-1:exon:25553;Parent=Msa0387590-mRNA-1
chr3_1 exon 91617009 91617089 91617009 ID=Msa0387590-mRNA-1:exon:25552;Parent=Msa0387590-mRNA-1
chr3_1 exon 91617551 91617606 91617551 ID=Msa0387590-mRNA-1:exon:25551;Parent=Msa0387590-mRNA-1
chr3_1 exon 91617951 91618194 91617951 ID=Msa0387590-mRNA-1:exon:25550;Parent=Msa0387590-mRNA-1
chr3_1 exon 91620054 91620401 91620054 ID=Msa0387590-mRNA-1:exon:25549;Parent=Msa0387590-mRNA-1
chr3_1 exon 91620739 91620884 91620739 ID=Msa0387590-mRNA-1:exon:25548;Parent=Msa0387590-mRNA-1
chr3_1 exon 91620999 91621088 91620999 ID=Msa0387590-mRNA-1:exon:25547;Parent=Msa0387590-mRNA-1
chr3_1 exon 91621534 91621815 91621534 ID=Msa0387590-mRNA-1:exon:25546;Parent=Msa0387590-mRNA-1
chr3_1 exon 91621932 91622490 91621932 ID=Msa0387590-mRNA-1:exon:25545;Parent=Msa0387590-mRNA-1
chr3_1 exon 91623567 91623718 91623567 ID=Msa0387590-mRNA-1:exon:25544;Parent=Msa0387590-mRNA-1
chr3_1 exon 91623817 91623853 91623817 ID=Msa0387590-mRNA-1:exon:25543;Parent=Msa0387590-mRNA-1
chr3_1 exon 91625297 91625402 91625297 ID=Msa0387590-mRNA-1:exon:25542;Parent=Msa0387590-mRNA-1
chr3_1 exon 91625490 91625578 91625490 ID=Msa0387590-mRNA-1:exon:25541;Parent=Msa0387590-mRNA-1
chr3_1 exon 91626071 91626130 91626071 ID=Msa0387590-mRNA-1:exon:25540;Parent=Msa0387590-mRNA-1
chr3_1 exon 91626345 91626465 91626345 ID=Msa0387590-mRNA-1:exon:25539;Parent=Msa0387590-mRNA-1
chr3_1 exon 91626554 91627004 91626554 ID=Msa0387590-mRNA-1:exon:25538;Parent=Msa0387590-mRNA-1
chr3_1 five_prime_UTR 91626898 91627004 91626898 ID=Msa0387590-mRNA-1:five_prime_utr;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91626554 91626897 91626554 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91626345 91626465 91626345 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91626071 91626130 91626071 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91625490 91625578 91625490 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91625297 91625402 91625297 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91623817 91623853 91623817 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91623567 91623718 91623567 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91621932 91622490 91621932 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91621534 91621815 91621534 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91620999 91621088 91620999 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91620739 91620884 91620739 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91620054 91620401 91620054 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91617951 91618194 91617951 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91617551 91617606 91617551 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91617009 91617089 91617009 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91615885 91615929 91615885 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91615723 91615791 91615723 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 CDS 91614810 91614989 91614810 ID=Msa0387590-mRNA-1:cds;Parent=Msa0387590-mRNA-1
chr3_1 three_prime_UTR 91614567 91614809 91614567 ID=Msa0387590-mRNA-1:three_prime_utr;Parent=Msa0387590-mRNA-1
Gene Sequence

>Msa0387590

ATGATAATTAAATTGAATACCGGTATCCATGCGCCAGATCGATCGAAACAACGCAAAACTTGGCAAACTAGCTCAGACTCTAGTAAAGCAAATAGTCCATTCCATTCCATTCCATCCATGGAGGTTTCACTCTCAGACGATCAACTTATCCTCCTCGTTTGCACTAACAGCTCGGATCATCATCCAATTGAAGAAGAGAATGAGATTCTTCTTTCAATCACCGATGTCATCGTTTCTGATTTATCAACATTTCTCAATTTTCACACCATCAAACTTCACGCACACCGCAACAGGCTCATTCACCACTCTTTGTATTTCCGAGGCCTTCTCAGTGGAAGCTTCAGTGAATCATGCTCCGCCTCCATCACTGTCAATTGGAATCTGCCTGTGTTTATGCAAATTCTTAAGCATATATATCGCTGTTCTTTGGATATTACCACTCAAAATGTCCTCCCCCTTTACGAGGGAGCACTTTATTTTGGAGTGGATACACTTATCGTAAAATGTGAGGATTGGTTTTCTGAGATGTGGGCAAAGCAGAGCAATTTTTTTGGAGAAGTTCCATATAACTTACTGTTATCTTCAGTAAAGCACCCTCATTTGACTGTTGACAGTGAGATGCATCTCTCTGATGCACTTCTTCTTTGGCTTGAAAGTAACATGGAAAATTTGGAGACGCGGAGCGAAGCAGAAGACAACTGCAATGGAATTTTAAAACAAATTCATGTGGAACTTTTGCCTTTGTGGTTTGCTGCAGGAAAAAGAAACTCTTTTTATTTTAGGCAGCTGGCTGAGGAAAGCCTTGGTTCAATTTTCAGAGCACTGAATATTCTCCCTATTGGTTCACTTGATATTTCTGGGTATAGTGACTTGCAACATCTCAGGATTCGAGTTACAGAATATTCAAAGAAAATAGACCTTTCCAATTGTCCGCAAATAACATCTGCAATACTGCTTCTGTCACTCATACCTGCATCATATCTAACGGATCCCATGCAAAGGAGGATTATAGAACAGTTCTTTATTAATTCTGGACATCCCATACAAGAGAAGTATGAATTCCCACAAAAAATGTTAGAAACCTTTATCTTTGAAGCAGTTCAGGAGGTGGATATCTCGAAGTGTCGAAGACTGTTTATTGAACATGCTGTTAATTGCTTCAGCCGGTCCTTTCCTTCCTTAAGAATCTTAAAAGCAGCTTATCTTTTAAATATCAGGACAATCAGTTTCCTTCGGTTATTGGAGAAGTGCTCTCTGGTCAACGAAGTTGACTTGACTGTCGATGTTACACCTCTAATTCCAGCATCAGTTACAGTTTTATCCTCTAGCCCTGTTGTGATACCACCGGTACCAGAGAAGACCCCAAGTCTTGAATATAAAGCAGTGGAAACCTTGTCATTTCATGAATCTAGACCTCAAATTTCTTATGTTACGAAACTCACCTTGGAGGGAAGAACTGATGTCAGTGATTTGAGCCTCCGGTACATCTCCAAATTCTTTGTTTCATTGTGTCACCTGAATATTAAAGGATGTGTTTGTGTCACTGATATTGGCATATCAGATCTCATACACAGATGTAACAAACTTAATTCGATTGTGGTCTGTGATACTTCATTTGGGATAAATTCAGTTCAAGCTCTTTGCTCAGCTATTTCTGATGGTGGCAACTTTCCCTCTTTACATTCTAGAGATATGCATTTGAATTCTGTGGTGTCTAATCTTCAAGCTCTGCATATGGGTGGCTGCATGGGGTCTAGAGCTACTTTTTGTCCTTGTGGGGACAACTCAGTGGTAACCTCAAGGGATGGTGTTCAAATCCCCTCAAGGACAGTTGTAAATGGTATTTCTGAGTTATCTCTACAAGAGCTTATGTCTCAAACACAAGTTTTGAAGAATCTATGCCTGAGAGGGACATACCTGGTTGACCAGGCACTATATAATTTCAATGGCTCTTCCTTGGAAATGCTTGATGTGTCAGACACCAAGATTTCTGAAGCTGCATTAAGTTTTGTTATTCATGGAAATCCAAGTTTGAAGAGTCTGAAAATCAGAGGTTGTAAAAATTTGTTAAAAGGAGATAGTTCTATTGAAAAGAGAGAACCTTGCTTTTCCTCCTTACATGAAGAACTGCATGCTGAGTTAGGAAAGAAGTGTAGATTGGAAGAAATTGAATTTGGTTGGGGTTTTCCTTCCTTCTCTCTAAGTGCTTTGGAACCTGCATTGACGTCATTAAAGACCATCAATGTAGGTTTAGGTGGAATGTTAGGTGAAGATGCATTGAGACAATTACCAGCAATCTGTCCCTTGCTAGAAACAATAATCCTTCATTTTCAGGTAATATCTGACATCATTGTGAGGAAATTAGTTACGTCCTTGATGAACTTACAAGTATTAGCTATGTGCTATTGTTTTGGTGATATATCCATGTCAAGCTTCAAATTCCCCATGCAAAATCTAAGAAAGTTGAGGCTTGAAAGAGTAACCCCATGGATGACAAATGATGATTTGGTTATTTTGTCTCAAAACTGTAGAAATTTGGTTGAGCTTTCATTGCTGGGCTGTCCTCTTCTTAACTCAGATTCTCAACAGATAATTTCACGTGCATGGCCAGGCTTGGTCGCTATGCATCTTGAGGAATGTGGAGAAATAACAGCAAATGGTGTCTCTGCTCTTCTTGACTGCAGAGCTCTAGAAGATCTTTTGTTGCGTCATAATGGCCTTGGGCTACAAAGAAACTTCGTTTTACATGCTGCTTCAGAGTTGCCATTGCTTCGAAAATTGTCACTGGATATATGTGATGCAATTGAAGGTGGTTTTGACATTCCAAATTATGCCGATAGATACTTTTTGAGTACCTTGAAGATAGCAAAATGCAAATCTCAAAGATGTGCATTTAATCTCCCAGTCCCCCCTCCAGGGACTCGTAGACGATCGGTGCATGTAGAAACACTGGTGCTTGTGTGGAACAGCGAAAATCTCACTAGAACAGTGGTGAAGGAAAGGCTTTAG
Protein sequence

>Msa0387590

MIIKLNTGIHAPDRSKQRKTWQTSSDSSKANSPFHSIPSMEVSLSDDQLILLVCTNSSDHHPIEEENEILLSITDVIVSDLSTFLNFHTIKLHAHRNRLIHHSLYFRGLLSGSFSESCSASITVNWNLPVFMQILKHIYRCSLDITTQNVLPLYEGALYFGVDTLIVKCEDWFSEMWAKQSNFFGEVPYNLLLSSVKHPHLTVDSEMHLSDALLLWLESNMENLETRSEAEDNCNGILKQIHVELLPLWFAAGKRNSFYFRQLAEESLGSIFRALNILPIGSLDISGYSDLQHLRIRVTEYSKKIDLSNCPQITSAILLLSLIPASYLTDPMQRRIIEQFFINSGHPIQEKYEFPQKMLETFIFEAVQEVDISKCRRLFIEHAVNCFSRSFPSLRILKAAYLLNIRTISFLRLLEKCSLVNEVDLTVDVTPLIPASVTVLSSSPVVIPPVPEKTPSLEYKAVETLSFHESRPQISYVTKLTLEGRTDVSDLSLRYISKFFVSLCHLNIKGCVCVTDIGISDLIHRCNKLNSIVVCDTSFGINSVQALCSAISDGGNFPSLHSRDMHLNSVVSNLQALHMGGCMGSRATFCPCGDNSVVTSRDGVQIPSRTVVNGISELSLQELMSQTQVLKNLCLRGTYLVDQALYNFNGSSLEMLDVSDTKISEAALSFVIHGNPSLKSLKIRGCKNLLKGDSSIEKREPCFSSLHEELHAELGKKCRLEEIEFGWGFPSFSLSALEPALTSLKTINVGLGGMLGEDALRQLPAICPLLETIILHFQVISDIIVRKLVTSLMNLQVLAMCYCFGDISMSSFKFPMQNLRKLRLERVTPWMTNDDLVILSQNCRNLVELSLLGCPLLNSDSQQIISRAWPGLVAMHLEECGEITANGVSALLDCRALEDLLLRHNGLGLQRNFVLHAASELPLLRKLSLDICDAIEGGFDIPNYADRYFLSTLKIAKCKSQRCAFNLPVPPPGTRRRSVHVETLVLVWNSENLTRTVVKERL*