AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0387860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387860 MtrunA17_Chr3g0121411 96.133 543 21 0 1 543 1 543 0.0 1075
Msa0387860 MtrunA17_Chr3g0121431 93.135 539 37 0 1 539 56 594 0.0 1042
Msa0387860 MtrunA17_Chr7g0236041 76.436 505 119 0 29 533 28 532 0.0 845
Msa0387860 MtrunA17_Chr6g0453731 60.456 526 202 5 11 532 10 533 0.0 662
Msa0387860 MtrunA17_Chr1g0178831 39.869 459 182 10 71 525 46 414 6.76e-97 301
Msa0387860 MtrunA17_Chr3g0098721 39.606 457 187 9 71 526 43 411 2.20e-94 294
Msa0387860 MtrunA17_Chr7g0266131 38.478 460 189 10 70 525 53 422 1.52e-92 290
Msa0387860 MtrunA17_Chr5g0443881 38.950 457 190 9 71 526 49 417 3.32e-89 281
Msa0387860 MtrunA17_Chr7g0266151 38.126 459 191 10 71 525 47 416 1.27e-87 276
Msa0387860 MtrunA17_Chr4g0019091 38.987 395 166 9 143 521 109 444 1.00e-76 249
Msa0387860 MtrunA17_Chr4g0064541 34.476 496 225 12 52 528 36 450 9.07e-74 242
Msa0387860 MtrunA17_Chr1g0211041 37.722 395 171 9 143 521 111 446 4.07e-72 238
Msa0387860 MtrunA17_Chr4g0019071 37.101 345 146 7 200 528 39 328 3.52e-64 213
Msa0387860 MtrunA17_Chr4g0022251 26.076 395 221 12 77 442 223 575 6.47e-25 108
Msa0387860 MtrunA17_Chr5g0419621 28.049 328 167 11 147 432 245 545 1.50e-24 107
Msa0387860 MtrunA17_Chr4g0043021 27.363 402 197 16 69 422 142 496 1.57e-23 104
Msa0387860 MtrunA17_Chr8g0364481 28.049 328 167 12 147 432 238 538 4.69e-23 103
Msa0387860 MtrunA17_Chr1g0173511 25.654 382 196 16 77 415 86 422 5.05e-22 99.4
Msa0387860 MtrunA17_Chr4g0057551 27.027 333 166 12 147 433 253 554 1.57e-21 98.6
Msa0387860 MtrunA17_Chr4g0043001 27.861 402 201 15 66 422 139 496 3.26e-21 97.4
Msa0387860 MtrunA17_Chr3g0116051 25.982 331 172 11 147 433 249 550 3.19e-20 94.4
Msa0387860 MtrunA17_Chr3g0116091 22.760 413 184 13 147 527 90 399 6.38e-16 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387860 AT3G07130.1 75.446 505 121 1 29 533 22 523 0.0 810
Msa0387860 AT3G07130.2 70.818 538 121 2 29 533 22 556 0.0 793
Msa0387860 AT2G32770.3 59.158 546 200 10 5 532 1 541 0.0 625
Msa0387860 AT2G32770.1 55.311 546 192 11 5 532 1 512 0.0 571
Msa0387860 AT4G13700.1 57.494 447 181 4 4 448 3 442 0.0 531
Msa0387860 AT2G32770.2 59.767 430 154 7 85 499 2 427 7.53e-175 500
Msa0387860 AT4G13700.2 55.309 405 172 4 4 406 3 400 8.14e-158 456
Msa0387860 AT3G52820.1 39.232 469 191 10 61 525 37 415 3.96e-99 307
Msa0387860 AT3G52810.1 38.495 465 196 9 61 523 41 417 1.93e-96 300
Msa0387860 AT3G52780.1 39.869 459 186 10 71 525 44 416 2.15e-93 292
Msa0387860 AT3G20500.1 37.657 478 200 11 71 542 47 432 1.35e-91 288
Msa0387860 AT2G27190.1 33.889 540 244 17 10 528 9 456 2.39e-75 246
Msa0387860 AT1G56360.1 32.270 533 258 14 9 525 3 448 2.81e-75 246
Msa0387860 AT2G16430.2 33.456 544 251 16 1 525 1 452 3.13e-74 243
Msa0387860 AT5G34850.1 33.266 493 235 14 52 528 35 449 1.39e-69 231
Msa0387860 AT3G52780.2 41.691 343 146 9 71 409 44 336 7.21e-69 226
Msa0387860 AT2G16430.1 36.340 388 172 9 157 528 7 335 6.37e-68 223
Msa0387860 AT4G36350.1 36.409 401 179 10 141 525 108 448 6.68e-68 227
Msa0387860 AT2G18130.1 34.328 402 168 10 143 528 111 432 6.16e-59 202
Msa0387860 AT3G46120.1 33.016 315 115 8 213 514 130 361 1.01e-37 143
Msa0387860 AT5G50400.2 25.679 405 215 16 76 433 101 466 9.74e-25 108
Msa0387860 AT5G50400.1 25.679 405 215 16 76 433 173 538 1.22e-24 108
Msa0387860 AT2G03450.1 26.667 420 207 16 70 433 142 516 1.26e-21 99.4
Msa0387860 AT1G13900.1 25.542 415 212 15 71 432 145 515 1.59e-21 99.0
Msa0387860 AT4G24890.1 25.220 341 182 11 137 433 231 542 6.01e-20 94.0
Msa0387860 AT1G52940.1 32.474 194 103 6 143 332 72 241 1.90e-18 85.5
Msa0387860 AT1G13750.1 27.517 298 163 11 147 415 239 512 8.87e-18 87.0

Find 157 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAACCACGTTGGGATTAT+TGG 0.135113 3_1:+91979483 Msa0387860:CDS
ATGACTCTGTTTGGATTTCT+TGG 0.152123 3_1:+91975944 Msa0387860:CDS
CCAACTGTTTCAGGATTTAA+TGG 0.159057 3_1:-91978532 None:intergenic
GTTCTATATTCTCCCCAATT+TGG 0.189329 3_1:-91978510 None:intergenic
AATTTATCTGGTGTAGTTAA+TGG 0.192467 3_1:-91980325 None:intergenic
ACTATGCTACCAACTGTTTC+AGG 0.206870 3_1:-91978541 None:intergenic
GTTTGGATTTCTTGGATTAC+AGG 0.213185 3_1:+91975952 Msa0387860:CDS
TTCAGAACAATGCCAGTTTC+AGG 0.221017 3_1:+91979251 Msa0387860:CDS
TGTACCTCCTCTGGCTTAAC+TGG 0.252345 3_1:-91980648 None:intergenic
AGTGAGAGAGAGATTTGTTC+AGG 0.264796 3_1:-91975910 None:intergenic
AAACTCATGCATTATGGATT+TGG 0.267207 3_1:+91980553 Msa0387860:CDS
TTTGCAGGAGAATTCCAAAT+TGG 0.267563 3_1:+91978496 Msa0387860:intron
TTAACTGGTGGACACTTATC+AGG 0.273283 3_1:-91980633 None:intergenic
CAAATGGTTGGAAAAGGATT+TGG 0.284128 3_1:+91979925 Msa0387860:CDS
TCAACCACGTTGGGATTATT+GGG 0.287498 3_1:+91979484 Msa0387860:CDS
TCATCCTGATCTTATTCTAT+TGG 0.289686 3_1:+91979364 Msa0387860:CDS
CTATGTTCAATCCTTGTTCA+TGG 0.306978 3_1:+91975757 Msa0387860:CDS
AGGAAAGTACATTAAAGAAT+TGG 0.311178 3_1:-91975526 None:intergenic
AGAATGAAACTCATGCATTA+TGG 0.316248 3_1:+91980547 Msa0387860:CDS
CTACCTCTCATGACTCTGTT+TGG 0.320154 3_1:+91975935 Msa0387860:CDS
TGATATTGATATAGTGTGTT+AGG 0.341924 3_1:-91979185 None:intergenic
ATTCCCTTCTATTACCATTA+CGG 0.348130 3_1:-91979630 None:intergenic
TCTGGTGTAGTTAATGGTTC+AGG 0.348384 3_1:-91980319 None:intergenic
TTCCCTTCTATTACCATTAC+GGG 0.355427 3_1:-91979629 None:intergenic
GAAGATTTACTATATAAATA+TGG 0.358061 3_1:+91980058 Msa0387860:CDS
TAACTCTTGGGGCCTGAAAC+TGG 0.358748 3_1:-91979263 None:intergenic
GGACTTCACAACTATACTTC+TGG 0.360812 3_1:+91978646 Msa0387860:CDS
CAGTTGGTGACGGTGGTAAT+CGG 0.364627 3_1:+91980254 Msa0387860:CDS
AAGCCTCTCATAAATTTATC+TGG 0.365817 3_1:-91980337 None:intergenic
AATGGTTCAGGACAGTTTCC+TGG 0.369240 3_1:-91980307 None:intergenic
GTGATGAAATTTACATTGTT+AGG 0.371981 3_1:+91980607 Msa0387860:CDS
GTCCCCGTAATGGTAATAGA+AGG 0.374867 3_1:+91979626 Msa0387860:CDS
CAACAGAATTTACCTGTTGC+TGG 0.382998 3_1:-91980385 None:intergenic
GGTGTTGACATTGTCTTTAA+CGG 0.387443 3_1:+91980079 Msa0387860:CDS
ATTCTGCTAGGGTAACTCTT+GGG 0.401449 3_1:-91979275 None:intergenic
TTGCAGGAGAATTCCAAATT+GGG 0.404952 3_1:+91978497 Msa0387860:intron
AGGATTTGGCTTCTCTTGAC+AGG 0.407338 3_1:+91979939 Msa0387860:CDS
ATAGTTCAATATGGAAGGTT+TGG 0.408192 3_1:+91978559 Msa0387860:CDS
TTATATTATTCTTTCAATGC+TGG 0.411394 3_1:+91979746 Msa0387860:CDS
GTTGGTAGCATAGTTCAATA+TGG 0.412379 3_1:+91978550 Msa0387860:CDS
GCTAACATGTATCTTACTAA+TGG 0.431678 3_1:+91979404 Msa0387860:CDS
AACGTGGTTGATATGTTTCA+TGG 0.437111 3_1:-91979472 None:intergenic
TATTTATTTATTCAGGTACA+TGG 0.440064 3_1:+91979586 Msa0387860:intron
TTGTCAAGAGGAACTGTCAC+TGG 0.441474 3_1:-91975814 None:intergenic
TAACTATGGAGTGAGCTAAA+TGG 0.442033 3_1:-91975657 None:intergenic
TGATGAAGTGTTGTGAATTC+CGG 0.442390 3_1:-91975409 None:intergenic
AGGTACATAAAACATGAATC+TGG 0.446772 3_1:+91980664 Msa0387860:exon
GATTCTGCTAGGGTAACTCT+TGG 0.450391 3_1:-91979276 None:intergenic
AGTTGGTGACGGTGGTAATC+GGG 0.450621 3_1:+91980255 Msa0387860:CDS
TCACCAACTGTGATATAAAC+AGG 0.450798 3_1:-91980241 None:intergenic
CCTGATCTTATTCTATTGGT+TGG 0.452498 3_1:+91979368 Msa0387860:CDS
CGCGAAAGCAGCTTCGGTCA+TGG 0.456698 3_1:+91980436 Msa0387860:CDS
AACCGCAATCAAGACTTGTA+TGG 0.458850 3_1:+91980576 Msa0387860:CDS
TCGCGAAAAGCACTATAATC+AGG 0.460017 3_1:-91980418 None:intergenic
GAATTTACCTGTTGCTGGAC+CGG 0.464464 3_1:-91980380 None:intergenic
TCAATACAAATGGTTGGAAA+AGG 0.467825 3_1:+91979919 Msa0387860:CDS
ATAGAGAAGCGGAGTGTATG+AGG 0.471491 3_1:+91980026 Msa0387860:CDS
ATTTATTAAATTAAATGTAA+AGG 0.474733 3_1:-91975468 None:intergenic
AGGAACTGTCACTGGCTTGA+AGG 0.474736 3_1:-91975806 None:intergenic
TACATATCATACGACAAATC+AGG 0.480296 3_1:+91979797 Msa0387860:CDS
ATTAAATTAAATGTAAAGGA+AGG 0.483345 3_1:-91975464 None:intergenic
GATTTCTAGTGTCCCCGTAA+TGG 0.483412 3_1:+91979616 Msa0387860:CDS
ATGTATCTTACTAATGGTAC+TGG 0.488834 3_1:+91979410 Msa0387860:CDS
GCGAAAGCAGCTTCGGTCAT+GGG 0.495435 3_1:+91980437 Msa0387860:CDS
TGAACAAGAGGATCTGTGTC+TGG 0.496265 3_1:-91975865 None:intergenic
TTGCAGGGGATCAATACAAA+TGG 0.501518 3_1:+91979909 Msa0387860:intron
CGGTGGTAATCGGGAAAAGA+TGG 0.501818 3_1:+91980264 Msa0387860:CDS
CCAACCACCGCGATTCTGCT+AGG 0.502397 3_1:-91979287 None:intergenic
TGAAACATATCAACCACGTT+GGG 0.509239 3_1:+91979475 Msa0387860:CDS
AATGTGAAGTTAGATAACTA+TGG 0.513211 3_1:-91975671 None:intergenic
TACACGGTTTGATCTCTCAT+AGG 0.516734 3_1:-91980191 None:intergenic
CCTAGCAGAATCGCGGTGGT+TGG 0.516976 3_1:+91979287 Msa0387860:CDS
CAGCAACAGGTAAATTCTGT+TGG 0.517767 3_1:+91980386 Msa0387860:CDS
TCGACATTTCTTTGAACAAG+AGG 0.519125 3_1:-91975877 None:intergenic
TGATTTGTCGTATGATATGT+AGG 0.519583 3_1:-91979795 None:intergenic
ATCGCGGTGGTTGGAGACTT+AGG 0.520583 3_1:+91979296 Msa0387860:CDS
AGCAACAGGTAAATTCTGTT+GGG 0.525098 3_1:+91980387 Msa0387860:CDS
CAAGACTTGTATGGGACCGC+TGG 0.527642 3_1:+91980585 Msa0387860:CDS
TAGAGAAGCGGAGTGTATGA+GGG 0.528854 3_1:+91980027 Msa0387860:CDS
GGAACTGTCACTGGCTTGAA+GGG 0.529676 3_1:-91975805 None:intergenic
TCACTCATTGCTGACAAAGA+AGG 0.529974 3_1:-91979218 None:intergenic
GTAGCATAGTTCAATATGGA+AGG 0.530620 3_1:+91978554 Msa0387860:CDS
TAGTTGTGAAGTCCTTCAAA+AGG 0.534388 3_1:-91978637 None:intergenic
CAGGGAAGTAACTCCGTGGC+TGG 0.534766 3_1:+91979958 Msa0387860:CDS
CTTGTTCAAAGAAATGTCGA+AGG 0.547208 3_1:+91975880 Msa0387860:CDS
CCAACCAATAGAATAAGATC+AGG 0.548082 3_1:-91979368 None:intergenic
GGAGTGTATGAGGGTTGAGA+TGG 0.551714 3_1:+91980036 Msa0387860:CDS
GTAGTTCCAACCACATTGGA+TGG 0.551797 3_1:+91975781 Msa0387860:CDS
GTTTATATCACAGTTGGTGA+CGG 0.553418 3_1:+91980244 Msa0387860:CDS
ATCTGTGTCTGGTATGTCCA+CGG 0.553698 3_1:-91975854 None:intergenic
CCTCTTGACAAAAGCTTCCG+TGG 0.555326 3_1:+91975826 Msa0387860:CDS
TATTATTCTTTCAATGCTGG+AGG 0.555597 3_1:+91979749 Msa0387860:CDS
CATTTCCGTCGGAAGAGAGT+GGG 0.556408 3_1:+91979711 Msa0387860:CDS
ATTGGTGTGAAATTTGAGTC+CGG 0.557241 3_1:+91975390 Msa0387860:intron
ACCTCCTCTGGCTTAACTGG+TGG 0.558777 3_1:-91980645 None:intergenic
AAGGGTCCATCCAATGTGGT+TGG 0.560663 3_1:-91975787 None:intergenic
CAACCACCGCGATTCTGCTA+GGG 0.562235 3_1:-91979286 None:intergenic
TGAGTCATAACACAACATGA+AGG 0.562445 3_1:-91974399 None:intergenic
ATACATCATGTTCGTATCAC+AGG 0.563183 3_1:+91978673 Msa0387860:CDS
TCAATGAATGGTCAAGCTGT+TGG 0.563511 3_1:+91978586 Msa0387860:CDS
AAATGTAAAGGAAGGACAAG+TGG 0.564445 3_1:-91975456 None:intergenic
ACCGCAATCAAGACTTGTAT+GGG 0.564499 3_1:+91980577 Msa0387860:CDS
TTCTGCTAGGGTAACTCTTG+GGG 0.564752 3_1:-91979274 None:intergenic
GTATGTCCACGGCGTTTCCA+CGG 0.565443 3_1:-91975843 None:intergenic
CATATGATTGACAGTGGATG+TGG 0.567960 3_1:-91979333 None:intergenic
TGCAGGAGAATTCCAAATTG+GGG 0.570640 3_1:+91978498 Msa0387860:intron
GGTTGATATGTTTCATGGAT+GGG 0.571689 3_1:-91979467 None:intergenic
AAGCACTATAATCAGGCTGT+TGG 0.574180 3_1:-91980411 None:intergenic
TGGTTGATATGTTTCATGGA+TGG 0.574734 3_1:-91979468 None:intergenic
GCATTTCCGTCGGAAGAGAG+TGG 0.574813 3_1:+91979710 Msa0387860:CDS
CCATTAAATCCTGAAACAGT+TGG 0.578013 3_1:+91978532 Msa0387860:CDS
CACGTTGGGATTATTGGGGA+AGG 0.579789 3_1:+91979489 Msa0387860:CDS
ATTACTCATGCAGATGAACC+AGG 0.587346 3_1:+91980289 Msa0387860:CDS
GGTCCTGTTTATATCACAGT+TGG 0.588794 3_1:+91980238 Msa0387860:CDS
CAAGTCACATTATAGAGAAG+CGG 0.590594 3_1:+91980015 Msa0387860:CDS
ACGGGGACACTAGAAATCAA+TGG 0.590984 3_1:-91979611 None:intergenic
AATGTAAAGGAAGGACAAGT+GGG 0.593465 3_1:-91975455 None:intergenic
TGTGATATAAACAGGACCGC+AGG 0.599420 3_1:-91980233 None:intergenic
TGCCACGTAGCTACCAGCCA+CGG 0.601862 3_1:-91979971 None:intergenic
AGGTTTGGAAGATCAATGAA+TGG 0.603059 3_1:+91978574 Msa0387860:CDS
AGGGGATCAATACAAATGGT+TGG 0.605512 3_1:+91979913 Msa0387860:intron
TGGTGTAGTTCCAACCACAT+TGG 0.610664 3_1:+91975777 Msa0387860:CDS
CCAATGTGTAGTTATATACA+CGG 0.612057 3_1:-91980207 None:intergenic
TTCTCGATTTGCATTTCCGT+CGG 0.613715 3_1:+91979700 Msa0387860:CDS
TAGCTACGTGGCATGCACCT+TGG 0.617237 3_1:+91979981 Msa0387860:CDS
TCCCCGTAATGGTAATAGAA+GGG 0.617941 3_1:+91979627 Msa0387860:CDS
GTGATATAAACAGGACCGCA+GGG 0.618037 3_1:-91980232 None:intergenic
GGATTTGGCTTCTCTTGACA+GGG 0.619928 3_1:+91979940 Msa0387860:CDS
ACACCAGATAAATTTATGAG+AGG 0.624521 3_1:+91980334 Msa0387860:CDS
TCCCATACAAGTCTTGATTG+CGG 0.630219 3_1:-91980578 None:intergenic
CAACCACGTTGGGATTATTG+GGG 0.631636 3_1:+91979485 Msa0387860:CDS
GATGACCCACTCTCTTCCGA+CGG 0.633166 3_1:-91979716 None:intergenic
ATGAAACATATCAACCACGT+TGG 0.640282 3_1:+91979474 Msa0387860:CDS
AGAGACAGTGTAACAACATG+AGG 0.641265 3_1:-91975721 None:intergenic
TATATCACAGTTGGTGACGG+TGG 0.644765 3_1:+91980247 Msa0387860:CDS
AATCCAAACAGAGTCATGAG+AGG 0.649296 3_1:-91975938 None:intergenic
GTGTCCACCAGTTAAGCCAG+AGG 0.649880 3_1:+91980641 Msa0387860:CDS
AAGCTTCCGTGGAAACGCCG+TGG 0.655590 3_1:+91975837 Msa0387860:CDS
TTGGAACTACACCATGAACA+AGG 0.656568 3_1:-91975768 None:intergenic
CCGTGTATATAACTACACAT+TGG 0.657117 3_1:+91980207 Msa0387860:CDS
TCCCTTCTATTACCATTACG+GGG 0.657757 3_1:-91979628 None:intergenic
CTCCGTGGCTGGTAGCTACG+TGG 0.661238 3_1:+91979969 Msa0387860:CDS
TCCACCAGTTAAGCCAGAGG+AGG 0.663790 3_1:+91980644 Msa0387860:CDS
GATATAGCTGACTATACACA+AGG 0.671588 3_1:-91978615 None:intergenic
AATGTAAATTTCATCACCAG+CGG 0.671664 3_1:-91980601 None:intergenic
CTTGAAGGGTCCATCCAATG+TGG 0.677219 3_1:-91975791 None:intergenic
GATAATAGTTGTGCAAAACG+AGG 0.681404 3_1:-91975593 None:intergenic
TTACCCTAGCAGAATCGCGG+TGG 0.701240 3_1:+91979283 Msa0387860:CDS
GAGTTACCCTAGCAGAATCG+CGG 0.703295 3_1:+91979280 Msa0387860:CDS
GCTGATCATATGATTGACAG+TGG 0.709409 3_1:-91979339 None:intergenic
CTTCGGTCATGGGATCCTAG+AGG 0.710224 3_1:+91980447 Msa0387860:CDS
GACTTGTAAGTGCTGTACCA+AGG 0.729494 3_1:-91979998 None:intergenic
CTTCCCCAATAATCCCAACG+TGG 0.733997 3_1:-91979488 None:intergenic
AACTACACATTGGATCCCTG+CGG 0.737988 3_1:+91980217 Msa0387860:CDS
ACACTATATCAATATCAATG+CGG 0.747009 3_1:+91979191 Msa0387860:CDS
ATATAGCTGACTATACACAA+GGG 0.747493 3_1:-91978614 None:intergenic
TTGACAGGGAAGTAACTCCG+TGG 0.756383 3_1:+91979954 Msa0387860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATTTTTATTTTATTA+GGG - chr3_1:91976348-91976367 None:intergenic 0.0%
!!! AAAAATATTTTTATTTTATT+AGG - chr3_1:91976349-91976368 None:intergenic 0.0%
!!! AATATTTTTATTTTATTAGG+GGG - chr3_1:91976346-91976365 None:intergenic 10.0%
!! ATATTAATTATAGAAGAAAA+AGG + chr3_1:91976884-91976903 Msa0387860:intron 10.0%
!! TTGAATAATTTCTAATAAAT+AGG + chr3_1:91977489-91977508 Msa0387860:intron 10.0%
!! ATTAAATTAAATGTAAAGGA+AGG - chr3_1:91975467-91975486 None:intergenic 15.0%
!!! AGAATTGGATTTTTATTTAT+GGG - chr3_1:91975514-91975533 None:intergenic 15.0%
!!! AAGAATTGGATTTTTATTTA+TGG - chr3_1:91975515-91975534 None:intergenic 15.0%
!!! TAAACTAGTTTATCAATTAT+CGG - chr3_1:91976167-91976186 None:intergenic 15.0%
!!! GATCTTATTTTCAATTTAAA+TGG - chr3_1:91976389-91976408 None:intergenic 15.0%
!!! TATCATAAACCTTTTATTTT+TGG - chr3_1:91976548-91976567 None:intergenic 15.0%
!! TATTAATTATAGTAGCAAAA+AGG + chr3_1:91976842-91976861 Msa0387860:intron 15.0%
!! ATCTATGTAATATTAAATAG+AGG + chr3_1:91977321-91977340 Msa0387860:intron 15.0%
!! GTGAATGATTTATTATAAAT+AGG - chr3_1:91977457-91977476 None:intergenic 15.0%
!! TAATTTCTAATAAATAGGAT+CGG + chr3_1:91977494-91977513 Msa0387860:intron 15.0%
!! GGTTATTAAATAATATTTGT+GGG - chr3_1:91977966-91977985 None:intergenic 15.0%
!! TGGTTATTAAATAATATTTG+TGG - chr3_1:91977967-91977986 None:intergenic 15.0%
!!! TATTTTAATAAAAAGTGATG+TGG + chr3_1:91977997-91978016 Msa0387860:intron 15.0%
!!! ATTTTAATAAAAAGTGATGT+GGG + chr3_1:91977998-91978017 Msa0387860:intron 15.0%
!! TCTTGATTATTTATTTATTC+AGG + chr3_1:91979579-91979598 Msa0387860:intron 15.0%
!! GAAGATTTACTATATAAATA+TGG + chr3_1:91980058-91980077 Msa0387860:CDS 15.0%
!!! ATTTTATTTTTAGTCATGAG+AGG - chr3_1:91975573-91975592 None:intergenic 20.0%
!! TAACTTCACATTTGAAAAAT+GGG + chr3_1:91975682-91975701 Msa0387860:exon 20.0%
!! AGATAATATAAGTGAAAGAA+GGG - chr3_1:91975980-91975999 None:intergenic 20.0%
!! AAGATAATATAAGTGAAAGA+AGG - chr3_1:91975981-91976000 None:intergenic 20.0%
!!! CATTTTTTTTTTTCTTGTTG+TGG + chr3_1:91976056-91976075 Msa0387860:intron 20.0%
!! ATAACTTATAAACTAACTCA+TGG + chr3_1:91976209-91976228 Msa0387860:intron 20.0%
!! AATATCTTTATCAATCTTCT+AGG + chr3_1:91976495-91976514 Msa0387860:intron 20.0%
!!! AGAACACTTATTGTAATTTT+TGG - chr3_1:91976668-91976687 None:intergenic 20.0%
!! CAAATATATTAAGGAGAATT+TGG + chr3_1:91976742-91976761 Msa0387860:intron 20.0%
!!! GACTTAGACATTATTTTTTA+TGG - chr3_1:91976801-91976820 None:intergenic 20.0%
!! AATTATAGAAGAAAAAGGAA+AGG + chr3_1:91976889-91976908 Msa0387860:intron 20.0%
!! AAATCATGTTATATAAGACT+AGG + chr3_1:91976913-91976932 Msa0387860:intron 20.0%
!! AATTCAATCATTATACATTC+AGG - chr3_1:91977083-91977102 None:intergenic 20.0%
!!! TTTTTCAAATAAGATAACGT+AGG + chr3_1:91977146-91977165 Msa0387860:intron 20.0%
!!! TATCAAATAAGTCTTTTTTG+TGG + chr3_1:91977204-91977223 Msa0387860:intron 20.0%
!!! TAAGTCATAAGTTTAAAATC+TGG + chr3_1:91977243-91977262 Msa0387860:intron 20.0%
!! AAAGTGACATTAATTGTATT+TGG - chr3_1:91978210-91978229 None:intergenic 20.0%
!! AATATTAATGAAATTGGTGA+CGG - chr3_1:91978407-91978426 None:intergenic 20.0%
!!! CATTTTTGAATTATATTTGC+AGG + chr3_1:91978481-91978500 Msa0387860:intron 20.0%
!!! CTAATTTTTAATGAATGTTC+AGG - chr3_1:91978996-91979015 None:intergenic 20.0%
!! TATTTATTTATTCAGGTACA+TGG + chr3_1:91979586-91979605 Msa0387860:intron 20.0%
!! TTATATTATTCTTTCAATGC+TGG + chr3_1:91979746-91979765 Msa0387860:CDS 20.0%
!! ATACTAAAAGTGAATCAATA+AGG - chr3_1:91979874-91979893 None:intergenic 20.0%
! TGACTCAAAAATTGAAGATT+TGG + chr3_1:91974415-91974434 Msa0387860:intron 25.0%
!!! TTTAGGGTTTTAGATACTAA+AGG + chr3_1:91974735-91974754 Msa0387860:intron 25.0%
!! TTTTAGATACTAAAGGTTGA+GGG + chr3_1:91974742-91974761 Msa0387860:intron 25.0%
! TCTTACAAAGAGATACAAAT+GGG - chr3_1:91975124-91975143 None:intergenic 25.0%
! TTCTTACAAAGAGATACAAA+TGG - chr3_1:91975125-91975144 None:intergenic 25.0%
!! TCTTTATCTTGTTTATTCCT+TGG + chr3_1:91975248-91975267 Msa0387860:intron 25.0%
!! AGGAAAGTACATTAAAGAAT+TGG - chr3_1:91975529-91975548 None:intergenic 25.0%
!!! TGGAAAGTACATTGTTTTTT+AGG - chr3_1:91975549-91975568 None:intergenic 25.0%
! AATGTGAAGTTAGATAACTA+TGG - chr3_1:91975674-91975693 None:intergenic 25.0%
! CTAACTTCACATTTGAAAAA+TGG + chr3_1:91975681-91975700 Msa0387860:exon 25.0%
!!! TTGAAAAATGGGTTTTGTTT+TGG + chr3_1:91975693-91975712 Msa0387860:exon 25.0%
! AGCCTAATATATCACTTATT+GGG - chr3_1:91976126-91976145 None:intergenic 25.0%
!!! TTTAGTTTAGAGTATTGTAG+TGG + chr3_1:91976183-91976202 Msa0387860:intron 25.0%
! AATCTGATTGAATGTATACA+GGG + chr3_1:91976276-91976295 Msa0387860:intron 25.0%
! GATCGTTAAAGACTAAAAAA+AGG + chr3_1:91976405-91976424 Msa0387860:intron 25.0%
! TGTACAAAGCCAAAAATAAA+AGG + chr3_1:91976536-91976555 Msa0387860:intron 25.0%
! ACTATCTTATACAATAAGCA+TGG + chr3_1:91976641-91976660 Msa0387860:intron 25.0%
! CTATCTTATACAATAAGCAT+GGG + chr3_1:91976642-91976661 Msa0387860:intron 25.0%
! ATATAACATGTTAGTTGAAG+TGG - chr3_1:91976947-91976966 None:intergenic 25.0%
!! GGGCTATAAATTTTTATATG+AGG + chr3_1:91977000-91977019 Msa0387860:intron 25.0%
! AATAAAACTAATCCTCCTTT+CGG + chr3_1:91977430-91977449 Msa0387860:intron 25.0%
! TTATTATAAATAGGACCGAA+AGG - chr3_1:91977448-91977467 None:intergenic 25.0%
!! ATTTAAGACCTCAAAATTGA+GGG - chr3_1:91977838-91977857 None:intergenic 25.0%
!!! TCAATTTTGAGGTCTTAAAT+GGG + chr3_1:91977838-91977857 Msa0387860:intron 25.0%
! ATAACCTATAGCTACTAATT+TGG - chr3_1:91978740-91978759 None:intergenic 25.0%
! TTTCACATTAGATAACTACA+TGG + chr3_1:91978970-91978989 Msa0387860:intron 25.0%
!! TAGACAACTCAAATTTTAAG+AGG + chr3_1:91979013-91979032 Msa0387860:intron 25.0%
!! TTAGTTCTTCAAAAATAACC+AGG - chr3_1:91979129-91979148 None:intergenic 25.0%
! TGATATTGATATAGTGTGTT+AGG - chr3_1:91979188-91979207 None:intergenic 25.0%
! ACACTATATCAATATCAATG+CGG + chr3_1:91979191-91979210 Msa0387860:CDS 25.0%
!!! AATTTTGACTTGAGATTTCT+TGG + chr3_1:91979532-91979551 Msa0387860:intron 25.0%
!! GGAATACATTTTATAATGCT+CGG + chr3_1:91979770-91979789 Msa0387860:CDS 25.0%
! AATTTATCTGGTGTAGTTAA+TGG - chr3_1:91980328-91980347 None:intergenic 25.0%
! CTTACTTATATCTTACTAAG+TGG + chr3_1:91980501-91980520 Msa0387860:intron 25.0%
! GTGATGAAATTTACATTGTT+AGG + chr3_1:91980607-91980626 Msa0387860:CDS 25.0%
! ATTCTTTGACCCATTTTGTT+GGG + chr3_1:91974673-91974692 Msa0387860:intron 30.0%
!! GTTTTAGATACTAAAGGTTG+AGG + chr3_1:91974741-91974760 Msa0387860:intron 30.0%
! TTAGCCTTTGATTTCACTAA+GGG - chr3_1:91974939-91974958 None:intergenic 30.0%
TTAGTGAAATCAAAGGCTAA+GGG + chr3_1:91974939-91974958 Msa0387860:intron 30.0%
GAAACAATTGTAAACACCTT+GGG + chr3_1:91974997-91975016 Msa0387860:intron 30.0%
TTGTAAGAACTCATTGATAG+TGG + chr3_1:91975136-91975155 Msa0387860:intron 30.0%
! TATCTTGTTTATTCCTTGGT+TGG + chr3_1:91975252-91975271 Msa0387860:intron 30.0%
! TATATTGTTGTTGTTGCTTG+TGG + chr3_1:91975314-91975333 Msa0387860:intron 30.0%
!! TTGTTGCTTGTGGTTAATTT+TGG + chr3_1:91975324-91975343 Msa0387860:intron 30.0%
!!! TTGTGGTTAATTTTGGTTGT+TGG + chr3_1:91975331-91975350 Msa0387860:intron 30.0%
!! TACAAGTGCTTTGAAATAAC+AGG + chr3_1:91976007-91976026 Msa0387860:intron 30.0%
GCCTAATATATCACTTATTG+GGG - chr3_1:91976125-91976144 None:intergenic 30.0%
GAGCCTAATATATCACTTAT+TGG - chr3_1:91976127-91976146 None:intergenic 30.0%
AGGCTCTCTTTAACATAAAA+TGG + chr3_1:91976141-91976160 Msa0387860:intron 30.0%
CAATCTGATTGAATGTATAC+AGG + chr3_1:91976275-91976294 Msa0387860:intron 30.0%
!!! TTTTGGCTTTGTACAAACTA+AGG - chr3_1:91976531-91976550 None:intergenic 30.0%
TTTCTAATAAATAGGATCGG+AGG + chr3_1:91977497-91977516 Msa0387860:intron 30.0%
TTCTAATAAATAGGATCGGA+GGG + chr3_1:91977498-91977517 Msa0387860:intron 30.0%
!! ACTTTAAAATGGACACTCAA+AGG + chr3_1:91977764-91977783 Msa0387860:intron 30.0%
! CATTTAAGACCTCAAAATTG+AGG - chr3_1:91977839-91977858 None:intergenic 30.0%
!!! CTCAATTTTGAGGTCTTAAA+TGG + chr3_1:91977837-91977856 Msa0387860:intron 30.0%
AAAAAATGATGTGTCCATGT+GGG - chr3_1:91977865-91977884 None:intergenic 30.0%
TAAAAAATGATGTGTCCATG+TGG - chr3_1:91977866-91977885 None:intergenic 30.0%
CTCTAACAAAGAGTCTAATA+GGG + chr3_1:91977939-91977958 Msa0387860:intron 30.0%
ACCTAATAGATACTTCCATT+GGG - chr3_1:91978088-91978107 None:intergenic 30.0%
TACCTAATAGATACTTCCAT+TGG - chr3_1:91978089-91978108 None:intergenic 30.0%
ATTGTAAATGCTAGAATGGA+GGG + chr3_1:91978137-91978156 Msa0387860:intron 30.0%
! CTGACAAATTTTGTCAATAG+TGG - chr3_1:91978317-91978336 None:intergenic 30.0%
ATAGTTCAATATGGAAGGTT+TGG + chr3_1:91978559-91978578 Msa0387860:CDS 30.0%
ATATAGCTGACTATACACAA+GGG - chr3_1:91978617-91978636 None:intergenic 30.0%
! TTAACACTTTGACTTAGTAC+AGG + chr3_1:91978700-91978719 Msa0387860:intron 30.0%
ACACTTCAGAGATTTAGTTA+TGG + chr3_1:91978928-91978947 Msa0387860:intron 30.0%
CACTTCAGAGATTTAGTTAT+GGG + chr3_1:91978929-91978948 Msa0387860:intron 30.0%
!! CAACTCAAATTTTAAGAGGA+AGG + chr3_1:91979017-91979036 Msa0387860:intron 30.0%
TCATCCTGATCTTATTCTAT+TGG + chr3_1:91979364-91979383 Msa0387860:CDS 30.0%
GCTAACATGTATCTTACTAA+TGG + chr3_1:91979404-91979423 Msa0387860:CDS 30.0%
ATGTATCTTACTAATGGTAC+TGG + chr3_1:91979410-91979429 Msa0387860:CDS 30.0%
ATTCCCTTCTATTACCATTA+CGG - chr3_1:91979633-91979652 None:intergenic 30.0%
TATTATTCTTTCAATGCTGG+AGG + chr3_1:91979749-91979768 Msa0387860:CDS 30.0%
! TGATTTGTCGTATGATATGT+AGG - chr3_1:91979798-91979817 None:intergenic 30.0%
TACATATCATACGACAAATC+AGG + chr3_1:91979797-91979816 Msa0387860:CDS 30.0%
!!! TCATCCCTTTTTTTTATTGC+AGG + chr3_1:91979893-91979912 Msa0387860:intron 30.0%
!!! CATCCCTTTTTTTTATTGCA+GGG + chr3_1:91979894-91979913 Msa0387860:intron 30.0%
!!! ATCCCTTTTTTTTATTGCAG+GGG + chr3_1:91979895-91979914 Msa0387860:intron 30.0%
ATCCCCTGCAATAAAAAAAA+GGG - chr3_1:91979900-91979919 None:intergenic 30.0%
TCAATACAAATGGTTGGAAA+AGG + chr3_1:91979919-91979938 Msa0387860:CDS 30.0%
TTCTTACGAGAAAATTGAAC+AGG + chr3_1:91980162-91980181 Msa0387860:intron 30.0%
CCAATGTGTAGTTATATACA+CGG - chr3_1:91980210-91980229 None:intergenic 30.0%
ACACCAGATAAATTTATGAG+AGG + chr3_1:91980334-91980353 Msa0387860:CDS 30.0%
AAGCCTCTCATAAATTTATC+TGG - chr3_1:91980340-91980359 None:intergenic 30.0%
ATAATTGTGTAGACTAGAGA+AGG - chr3_1:91980481-91980500 None:intergenic 30.0%
AGAATGAAACTCATGCATTA+TGG + chr3_1:91980547-91980566 Msa0387860:CDS 30.0%
AAACTCATGCATTATGGATT+TGG + chr3_1:91980553-91980572 Msa0387860:CDS 30.0%
AATGTAAATTTCATCACCAG+CGG - chr3_1:91980604-91980623 None:intergenic 30.0%
AGGTACATAAAACATGAATC+TGG + chr3_1:91980664-91980683 Msa0387860:exon 30.0%
TGAGTCATAACACAACATGA+AGG - chr3_1:91974402-91974421 None:intergenic 35.0%
! GGAAAATGTGACACGATTTT+CGG + chr3_1:91974534-91974553 Msa0387860:intron 35.0%
! CATTCTTTGACCCATTTTGT+TGG + chr3_1:91974672-91974691 Msa0387860:intron 35.0%
AAGCTTCAAGATGTGAATCT+TGG + chr3_1:91974782-91974801 Msa0387860:intron 35.0%
AATCTTGGAGAACCAAAAGA+GGG + chr3_1:91974797-91974816 Msa0387860:intron 35.0%
! AGAGTCTTTTGTAAGCAACA+TGG + chr3_1:91974885-91974904 Msa0387860:intron 35.0%
! GAGTCTTTTGTAAGCAACAT+GGG + chr3_1:91974886-91974905 Msa0387860:intron 35.0%
AAGACCCTTAGTGAAATCAA+AGG + chr3_1:91974932-91974951 Msa0387860:intron 35.0%
! CTTAGCCTTTGATTTCACTA+AGG - chr3_1:91974940-91974959 None:intergenic 35.0%
CTTAGTGAAATCAAAGGCTA+AGG + chr3_1:91974938-91974957 Msa0387860:intron 35.0%
GGAAACAATTGTAAACACCT+TGG + chr3_1:91974996-91975015 Msa0387860:intron 35.0%
! TTCATGAGTGTCTTGTTCAT+TGG + chr3_1:91975030-91975049 Msa0387860:intron 35.0%
TCTTGTTCATTGGTGAGATT+GGG + chr3_1:91975040-91975059 Msa0387860:intron 35.0%
ATTGGTGAGATTGGGAAAAT+GGG + chr3_1:91975048-91975067 Msa0387860:intron 35.0%
TGGGAAAATGGGTAGAAATT+AGG + chr3_1:91975059-91975078 Msa0387860:intron 35.0%
GGGAAAATGGGTAGAAATTA+GGG + chr3_1:91975060-91975079 Msa0387860:intron 35.0%
!! AGAACTCATTGATAGTGGAT+TGG + chr3_1:91975141-91975160 Msa0387860:intron 35.0%
TTTATTCCTTGGTTGGATTG+TGG + chr3_1:91975259-91975278 Msa0387860:intron 35.0%
ATGCACTTGGTTTATAGACT+AGG + chr3_1:91975289-91975308 Msa0387860:intron 35.0%
CCAATACAAACTATGATGTG+TGG - chr3_1:91975375-91975394 None:intergenic 35.0%
! CCACACATCATAGTTTGTAT+TGG + chr3_1:91975372-91975391 Msa0387860:intron 35.0%
ATTGGTGTGAAATTTGAGTC+CGG + chr3_1:91975390-91975409 Msa0387860:intron 35.0%
!! TGATGAAGTGTTGTGAATTC+CGG - chr3_1:91975412-91975431 None:intergenic 35.0%
AATGTAAAGGAAGGACAAGT+GGG - chr3_1:91975458-91975477 None:intergenic 35.0%
AAATGTAAAGGAAGGACAAG+TGG - chr3_1:91975459-91975478 None:intergenic 35.0%
!!! TATTTTTAGTCATGAGAGGC+TGG - chr3_1:91975569-91975588 None:intergenic 35.0%
GATAATAGTTGTGCAAAACG+AGG - chr3_1:91975596-91975615 None:intergenic 35.0%
TAACTATGGAGTGAGCTAAA+TGG - chr3_1:91975660-91975679 None:intergenic 35.0%
CTATGTTCAATCCTTGTTCA+TGG + chr3_1:91975757-91975776 Msa0387860:CDS 35.0%
TCGACATTTCTTTGAACAAG+AGG - chr3_1:91975880-91975899 None:intergenic 35.0%
CTTGTTCAAAGAAATGTCGA+AGG + chr3_1:91975880-91975899 Msa0387860:CDS 35.0%
ATGACTCTGTTTGGATTTCT+TGG + chr3_1:91975944-91975963 Msa0387860:CDS 35.0%
GTTTGGATTTCTTGGATTAC+AGG + chr3_1:91975952-91975971 Msa0387860:CDS 35.0%
!! TTTTTCTTGTTGTGGTTCGT+TGG + chr3_1:91976064-91976083 Msa0387860:intron 35.0%
GCCCCAATAAGTGATATATT+AGG + chr3_1:91976121-91976140 Msa0387860:intron 35.0%
AATCATTATACATTCAGGCC+CGG - chr3_1:91977078-91977097 None:intergenic 35.0%
TTATAAATAGGACCGAAAGG+AGG - chr3_1:91977445-91977464 None:intergenic 35.0%
AAATGGACACTCAAAGGAAA+AGG + chr3_1:91977770-91977789 Msa0387860:intron 35.0%
CCTATTAGACTCTTTGTTAG+AGG - chr3_1:91977941-91977960 None:intergenic 35.0%
CCTCTAACAAAGAGTCTAAT+AGG + chr3_1:91977938-91977957 Msa0387860:intron 35.0%
ATGTGGGCCTATTTAAGAAT+GGG + chr3_1:91978014-91978033 Msa0387860:intron 35.0%
TAAGACCCCCATTCTTAAAT+AGG - chr3_1:91978024-91978043 None:intergenic 35.0%
ATTGGGGGAAAAAAAATTGG+AGG - chr3_1:91978071-91978090 None:intergenic 35.0%
!!! TCCAATTTTTTTTCCCCCAA+TGG + chr3_1:91978070-91978089 Msa0387860:intron 35.0%
TCCATTGGGGGAAAAAAAAT+TGG - chr3_1:91978074-91978093 None:intergenic 35.0%
CTAATAGATACTTCCATTGG+GGG - chr3_1:91978086-91978105 None:intergenic 35.0%
CCTAATAGATACTTCCATTG+GGG - chr3_1:91978087-91978106 None:intergenic 35.0%
ATTAGGTACCAGGTCTTAAA+TGG + chr3_1:91978101-91978120 Msa0387860:intron 35.0%
TTCTAGCATTTACAATCGTG+AGG - chr3_1:91978133-91978152 None:intergenic 35.0%
CACGATTGTAAATGCTAGAA+TGG + chr3_1:91978133-91978152 Msa0387860:intron 35.0%
GATTGTAAATGCTAGAATGG+AGG + chr3_1:91978136-91978155 Msa0387860:intron 35.0%
CTGAATGGAAGAATTGATAG+AGG + chr3_1:91978238-91978257 Msa0387860:intron 35.0%
TTTGCAGGAGAATTCCAAAT+TGG + chr3_1:91978496-91978515 Msa0387860:intron 35.0%
TTGCAGGAGAATTCCAAATT+GGG + chr3_1:91978497-91978516 Msa0387860:intron 35.0%
GTTCTATATTCTCCCCAATT+TGG - chr3_1:91978513-91978532 None:intergenic 35.0%
CCAACTGTTTCAGGATTTAA+TGG - chr3_1:91978535-91978554 None:intergenic 35.0%
CCATTAAATCCTGAAACAGT+TGG + chr3_1:91978532-91978551 Msa0387860:CDS 35.0%
!! GTTGGTAGCATAGTTCAATA+TGG + chr3_1:91978550-91978569 Msa0387860:CDS 35.0%
GTAGCATAGTTCAATATGGA+AGG + chr3_1:91978554-91978573 Msa0387860:CDS 35.0%
AGGTTTGGAAGATCAATGAA+TGG + chr3_1:91978574-91978593 Msa0387860:CDS 35.0%
GATATAGCTGACTATACACA+AGG - chr3_1:91978618-91978637 None:intergenic 35.0%
! AGTCAGCTATATCCTTTTGA+AGG + chr3_1:91978625-91978644 Msa0387860:CDS 35.0%
TAGTTGTGAAGTCCTTCAAA+AGG - chr3_1:91978640-91978659 None:intergenic 35.0%
ATACATCATGTTCGTATCAC+AGG + chr3_1:91978673-91978692 Msa0387860:CDS 35.0%
TAGTACAGGTACTAGTCATA+TGG + chr3_1:91978714-91978733 Msa0387860:intron 35.0%
ATGGCCAAATTAGTAGCTAT+AGG + chr3_1:91978733-91978752 Msa0387860:intron 35.0%
TTATGTACACCGATACTTCA+GGG + chr3_1:91978756-91978775 Msa0387860:intron 35.0%
TGTCTGTGTCAATATGTGTT+TGG + chr3_1:91978894-91978913 Msa0387860:intron 35.0%
GAGGAAGGAAAGATTTGAAA+AGG + chr3_1:91979032-91979051 Msa0387860:intron 35.0%
! TGAGTTGACTTAGAATGACT+AGG - chr3_1:91979089-91979108 None:intergenic 35.0%
CCAACCAATAGAATAAGATC+AGG - chr3_1:91979371-91979390 None:intergenic 35.0%
CCTGATCTTATTCTATTGGT+TGG + chr3_1:91979368-91979387 Msa0387860:CDS 35.0%
! GGTTGATATGTTTCATGGAT+GGG - chr3_1:91979470-91979489 None:intergenic 35.0%
! TGGTTGATATGTTTCATGGA+TGG - chr3_1:91979471-91979490 None:intergenic 35.0%
! AACGTGGTTGATATGTTTCA+TGG - chr3_1:91979475-91979494 None:intergenic 35.0%
ATGAAACATATCAACCACGT+TGG + chr3_1:91979474-91979493 Msa0387860:CDS 35.0%
TGAAACATATCAACCACGTT+GGG + chr3_1:91979475-91979494 Msa0387860:CDS 35.0%
TTCCCTTCTATTACCATTAC+GGG - chr3_1:91979632-91979651 None:intergenic 35.0%
! CTTGGTTCATCATTTTCTTC+TGG + chr3_1:91979826-91979845 Msa0387860:intron 35.0%
GATCCCCTGCAATAAAAAAA+AGG - chr3_1:91979901-91979920 None:intergenic 35.0%
CAAATGGTTGGAAAAGGATT+TGG + chr3_1:91979925-91979944 Msa0387860:CDS 35.0%
CAAGTCACATTATAGAGAAG+CGG + chr3_1:91980015-91980034 Msa0387860:CDS 35.0%
!! GGTGTTGACATTGTCTTTAA+CGG + chr3_1:91980079-91980098 Msa0387860:CDS 35.0%
CCGTGTATATAACTACACAT+TGG + chr3_1:91980207-91980226 Msa0387860:CDS 35.0%
TCACCAACTGTGATATAAAC+AGG - chr3_1:91980244-91980263 None:intergenic 35.0%
!! GTTTATATCACAGTTGGTGA+CGG + chr3_1:91980244-91980263 Msa0387860:CDS 35.0%
AGCAACAGGTAAATTCTGTT+GGG + chr3_1:91980387-91980406 Msa0387860:CDS 35.0%
GAGAAGGAAATATTACCTCT+AGG - chr3_1:91980465-91980484 None:intergenic 35.0%
!! TGGTAGAGTAATTAACTTGC+AGG + chr3_1:91980521-91980540 Msa0387860:intron 35.0%
TGAAGAAACGTGACACGATT+TGG + chr3_1:91974443-91974462 Msa0387860:intron 40.0%
CTCCAAGACAAACATGCATT+CGG - chr3_1:91974493-91974512 None:intergenic 40.0%
GAATGCATGTTTGTCTTGGA+GGG + chr3_1:91974492-91974511 Msa0387860:intron 40.0%
! GGAAAACGTGACACGATTTT+GGG + chr3_1:91974513-91974532 Msa0387860:intron 40.0%
CCAAGCTTACCCAACAAAAT+GGG - chr3_1:91974685-91974704 None:intergenic 40.0%
ACCAAGCTTACCCAACAAAA+TGG - chr3_1:91974686-91974705 None:intergenic 40.0%
GTGAATCTCATGGAAACCAA+AGG + chr3_1:91974704-91974723 Msa0387860:intron 40.0%
AATCTCATGGAAACCAAAGG+AGG + chr3_1:91974707-91974726 Msa0387860:intron 40.0%
ATCTCATGGAAACCAAAGGA+GGG + chr3_1:91974708-91974727 Msa0387860:intron 40.0%
! AACCAAAGGAGGGAACTTTT+AGG + chr3_1:91974718-91974737 Msa0387860:intron 40.0%
! ACCAAAGGAGGGAACTTTTA+GGG + chr3_1:91974719-91974738 Msa0387860:intron 40.0%
TACTAAAGGTTGAGGGTCTT+TGG + chr3_1:91974749-91974768 Msa0387860:intron 40.0%
ACTAAAGGTTGAGGGTCTTT+GGG + chr3_1:91974750-91974769 Msa0387860:intron 40.0%
GAATCTTGGAGAACCAAAAG+AGG + chr3_1:91974796-91974815 Msa0387860:intron 40.0%
ATCTTGGAGAACCAAAAGAG+GGG + chr3_1:91974798-91974817 Msa0387860:intron 40.0%
!! GAAAATGGTTGGTGCCTTTT+GGG + chr3_1:91974829-91974848 Msa0387860:intron 40.0%
!! AAAATGGTTGGTGCCTTTTG+GGG + chr3_1:91974830-91974849 Msa0387860:intron 40.0%
! TCACTAAGGGTCTTCTCTTT+TGG - chr3_1:91974926-91974945 None:intergenic 40.0%
TGAAATCAAAGGCTAAGGGT+TGG + chr3_1:91974943-91974962 Msa0387860:intron 40.0%
!!! CTAAGGGTTGGTTCTCTTTT+GGG + chr3_1:91974955-91974974 Msa0387860:intron 40.0%
!!! TAAGGGTTGGTTCTCTTTTG+GGG + chr3_1:91974956-91974975 Msa0387860:intron 40.0%
! CATGAATTTTCACTCTCCCA+AGG - chr3_1:91975016-91975035 None:intergenic 40.0%
! GTCTTGTTCATTGGTGAGAT+TGG + chr3_1:91975039-91975058 Msa0387860:intron 40.0%
CATTGGTGAGATTGGGAAAA+TGG + chr3_1:91975047-91975066 Msa0387860:intron 40.0%
CAAGAAATGTTCACCCAGTT+CGG - chr3_1:91975204-91975223 None:intergenic 40.0%
!! TTGTGGTTTTGCTATGCACT+TGG + chr3_1:91975276-91975295 Msa0387860:intron 40.0%
ATGTGTGGAGCAAGTATCAA+TGG - chr3_1:91975360-91975379 None:intergenic 40.0%
AGAGACAGTGTAACAACATG+AGG - chr3_1:91975724-91975743 None:intergenic 40.0%
TTGGAACTACACCATGAACA+AGG - chr3_1:91975771-91975790 None:intergenic 40.0%
! AGTGAGAGAGAGATTTGTTC+AGG - chr3_1:91975913-91975932 None:intergenic 40.0%
AATCCAAACAGAGTCATGAG+AGG - chr3_1:91975941-91975960 None:intergenic 40.0%
CTCGGCTCTCATGTAAAAAT+AGG + chr3_1:91976320-91976339 Msa0387860:intron 40.0%
TGTTAGTTGAAGTGGTCTAG+TGG - chr3_1:91976939-91976958 None:intergenic 40.0%
TTTATATGAGGCCCATACCT+TGG + chr3_1:91977012-91977031 Msa0387860:intron 40.0%
TTATATGAGGCCCATACCTT+GGG + chr3_1:91977013-91977032 Msa0387860:intron 40.0%
GACACTCAAAGGAAAAGGAA+AGG + chr3_1:91977775-91977794 Msa0387860:intron 40.0%
! TACTCTTAGAGCATCCACAA+TGG + chr3_1:91977809-91977828 Msa0387860:intron 40.0%
AAAATTGAGGGTCTCCATTG+TGG - chr3_1:91977826-91977845 None:intergenic 40.0%
! AATGGAGACCCTCAATTTTG+AGG + chr3_1:91977827-91977846 Msa0387860:intron 40.0%
TAGATACTCAACCACTCCAA+TGG + chr3_1:91977911-91977930 Msa0387860:intron 40.0%
CTTTGTTAGAGGATCTCCAT+TGG - chr3_1:91977930-91977949 None:intergenic 40.0%
GATGTGGGCCTATTTAAGAA+TGG + chr3_1:91978013-91978032 Msa0387860:intron 40.0%
TGTGGGCCTATTTAAGAATG+GGG + chr3_1:91978015-91978034 Msa0387860:intron 40.0%
TGGAGGTCTTAAAAGATCCA+AGG - chr3_1:91978054-91978073 None:intergenic 40.0%
!! CCCCAATGGAAGTATCTATT+AGG + chr3_1:91978084-91978103 Msa0387860:intron 40.0%
!! GGAAGTATCTATTAGGTACC+AGG + chr3_1:91978091-91978110 Msa0387860:intron 40.0%
TCACTTTCACATGCACTGAA+TGG + chr3_1:91978223-91978242 Msa0387860:intron 40.0%
TGACTCACTCTATACTCTCT+AGG + chr3_1:91978269-91978288 Msa0387860:intron 40.0%
ACTCTATACTCTCTAGGTGT+CGG + chr3_1:91978275-91978294 Msa0387860:intron 40.0%
TGCAGGAGAATTCCAAATTG+GGG + chr3_1:91978498-91978517 Msa0387860:intron 40.0%
ACTATGCTACCAACTGTTTC+AGG - chr3_1:91978544-91978563 None:intergenic 40.0%
TCAATGAATGGTCAAGCTGT+TGG + chr3_1:91978586-91978605 Msa0387860:CDS 40.0%
GGACTTCACAACTATACTTC+TGG + chr3_1:91978646-91978665 Msa0387860:CDS 40.0%
GTTATGTACACCGATACTTC+AGG + chr3_1:91978755-91978774 Msa0387860:intron 40.0%
AAGTCAAGCTTACATATGCC+TGG + chr3_1:91979108-91979127 Msa0387860:intron 40.0%
TCACTCATTGCTGACAAAGA+AGG - chr3_1:91979221-91979240 None:intergenic 40.0%
TTCAGAACAATGCCAGTTTC+AGG + chr3_1:91979251-91979270 Msa0387860:CDS 40.0%
ATTCTGCTAGGGTAACTCTT+GGG - chr3_1:91979278-91979297 None:intergenic 40.0%
CATATGATTGACAGTGGATG+TGG - chr3_1:91979336-91979355 None:intergenic 40.0%
GCTGATCATATGATTGACAG+TGG - chr3_1:91979342-91979361 None:intergenic 40.0%
ATCAACCACGTTGGGATTAT+TGG + chr3_1:91979483-91979502 Msa0387860:CDS 40.0%
TCAACCACGTTGGGATTATT+GGG + chr3_1:91979484-91979503 Msa0387860:CDS 40.0%
TCCCCGTAATGGTAATAGAA+GGG + chr3_1:91979627-91979646 Msa0387860:CDS 40.0%
TCCCTTCTATTACCATTACG+GGG - chr3_1:91979631-91979650 None:intergenic 40.0%
! TTCTCGATTTGCATTTCCGT+CGG + chr3_1:91979700-91979719 Msa0387860:CDS 40.0%
CGACAAATCAGGTTAACTCT+TGG + chr3_1:91979808-91979827 Msa0387860:intron 40.0%
TTGCAGGGGATCAATACAAA+TGG + chr3_1:91979909-91979928 Msa0387860:intron 40.0%
AGGGGATCAATACAAATGGT+TGG + chr3_1:91979913-91979932 Msa0387860:intron 40.0%
TACACGGTTTGATCTCTCAT+AGG - chr3_1:91980194-91980213 None:intergenic 40.0%
GGTCCTGTTTATATCACAGT+TGG + chr3_1:91980238-91980257 Msa0387860:CDS 40.0%
ATTACTCATGCAGATGAACC+AGG + chr3_1:91980289-91980308 Msa0387860:CDS 40.0%
TCTGGTGTAGTTAATGGTTC+AGG - chr3_1:91980322-91980341 None:intergenic 40.0%
! TGCGCCTTCAATTTTTCTTC+CGG + chr3_1:91980361-91980380 Msa0387860:CDS 40.0%
TGGACCGGAAGAAAAATTGA+AGG - chr3_1:91980368-91980387 None:intergenic 40.0%
CAACAGAATTTACCTGTTGC+TGG - chr3_1:91980388-91980407 None:intergenic 40.0%
CAGCAACAGGTAAATTCTGT+TGG + chr3_1:91980386-91980405 Msa0387860:CDS 40.0%
AAGCACTATAATCAGGCTGT+TGG - chr3_1:91980414-91980433 None:intergenic 40.0%
!! TCGCGAAAAGCACTATAATC+AGG - chr3_1:91980421-91980440 None:intergenic 40.0%
AACCGCAATCAAGACTTGTA+TGG + chr3_1:91980576-91980595 Msa0387860:CDS 40.0%
ACCGCAATCAAGACTTGTAT+GGG + chr3_1:91980577-91980596 Msa0387860:CDS 40.0%
TCCCATACAAGTCTTGATTG+CGG - chr3_1:91980581-91980600 None:intergenic 40.0%
! TTAACTGGTGGACACTTATC+AGG - chr3_1:91980636-91980655 None:intergenic 40.0%
! CATGTTTTATGTACCTCCTC+TGG - chr3_1:91980660-91980679 None:intergenic 40.0%
AACCGTGTCACGATTTCTGA+GGG + chr3_1:91974467-91974486 Msa0387860:intron 45.0%
CGAATGCATGTTTGTCTTGG+AGG + chr3_1:91974491-91974510 Msa0387860:intron 45.0%
! GGGAAAACGTGACACGATTT+TGG + chr3_1:91974512-91974531 Msa0387860:intron 45.0%
!! GCACGTTTTCAGGATAAGGT+TGG + chr3_1:91974565-91974584 Msa0387860:intron 45.0%
! GATAAGGTTGGTCGTACCTT+GGG + chr3_1:91974577-91974596 Msa0387860:intron 45.0%
GTATCAATCGTGGCACGATT+TGG + chr3_1:91974606-91974625 Msa0387860:intron 45.0%
! CCCATTTTGTTGGGTAAGCT+TGG + chr3_1:91974682-91974701 Msa0387860:intron 45.0%
! GGTAAGCTTGGTGAATCTCA+TGG + chr3_1:91974694-91974713 Msa0387860:intron 45.0%
ACCCTAAAAGTTCCCTCCTT+TGG - chr3_1:91974723-91974742 None:intergenic 45.0%
TCTTGGAGAACCAAAAGAGG+GGG + chr3_1:91974799-91974818 Msa0387860:intron 45.0%
!! GGAAAATGGTTGGTGCCTTT+TGG + chr3_1:91974828-91974847 Msa0387860:intron 45.0%
!! TGCCTTTTGGGGAAGATTCA+TGG + chr3_1:91974841-91974860 Msa0387860:intron 45.0%
!! GCCTTTTGGGGAAGATTCAT+GGG + chr3_1:91974842-91974861 Msa0387860:intron 45.0%
!! CCTTTTGGGGAAGATTCATG+GGG + chr3_1:91974843-91974862 Msa0387860:intron 45.0%
!!! GCTAAGGGTTGGTTCTCTTT+TGG + chr3_1:91974954-91974973 Msa0387860:intron 45.0%
!!! AAGGGTTGGTTCTCTTTTGG+GGG + chr3_1:91974957-91974976 Msa0387860:intron 45.0%
TGGGGGTTAGATTCTAGTGT+TGG + chr3_1:91974974-91974993 Msa0387860:intron 45.0%
GGGGGTTAGATTCTAGTGTT+GGG + chr3_1:91974975-91974994 Msa0387860:intron 45.0%
CGAACTGGGTGAACATTTCT+TGG + chr3_1:91975202-91975221 Msa0387860:intron 45.0%
GCAAAACCACAATCCAACCA+AGG - chr3_1:91975268-91975287 None:intergenic 45.0%
TGGTGTAGTTCCAACCACAT+TGG + chr3_1:91975777-91975796 Msa0387860:CDS 45.0%
GTAGTTCCAACCACATTGGA+TGG + chr3_1:91975781-91975800 Msa0387860:CDS 45.0%
TTGTCAAGAGGAACTGTCAC+TGG - chr3_1:91975817-91975836 None:intergenic 45.0%
ATCTGTGTCTGGTATGTCCA+CGG - chr3_1:91975857-91975876 None:intergenic 45.0%
TGAACAAGAGGATCTGTGTC+TGG - chr3_1:91975868-91975887 None:intergenic 45.0%
CTACCTCTCATGACTCTGTT+TGG + chr3_1:91975935-91975954 Msa0387860:CDS 45.0%
TATATGAGGCCCATACCTTG+GGG + chr3_1:91977014-91977033 Msa0387860:intron 45.0%
GCAAACAGCTCAATGGATCT+GGG - chr3_1:91977043-91977062 None:intergenic 45.0%
TGCAAACAGCTCAATGGATC+TGG - chr3_1:91977044-91977063 None:intergenic 45.0%
TTAGAGGATCTCCATTGGAG+TGG - chr3_1:91977925-91977944 None:intergenic 45.0%
GTGGGCCTATTTAAGAATGG+GGG + chr3_1:91978016-91978035 Msa0387860:intron 45.0%
! GGTCTTCACCATTTAAGACC+TGG - chr3_1:91978112-91978131 None:intergenic 45.0%
TGCCTTCAACCCTGAAGTAT+CGG - chr3_1:91978768-91978787 None:intergenic 45.0%
ACACCAAGGACTGACATGTT+GGG - chr3_1:91978797-91978816 None:intergenic 45.0%
AACACCAAGGACTGACATGT+TGG - chr3_1:91978798-91978817 None:intergenic 45.0%
GATTTAGTTATGGGCGCGAA+AGG + chr3_1:91978938-91978957 Msa0387860:intron 45.0%
AATCCTGCAGCAAAGAGAGT+AGG - chr3_1:91979161-91979180 None:intergenic 45.0%
TTCTGCTAGGGTAACTCTTG+GGG - chr3_1:91979277-91979296 None:intergenic 45.0%
GATTCTGCTAGGGTAACTCT+TGG - chr3_1:91979279-91979298 None:intergenic 45.0%
CAACCACGTTGGGATTATTG+GGG + chr3_1:91979485-91979504 Msa0387860:CDS 45.0%
ACGGGGACACTAGAAATCAA+TGG - chr3_1:91979614-91979633 None:intergenic 45.0%
!! GATTTCTAGTGTCCCCGTAA+TGG + chr3_1:91979616-91979635 Msa0387860:CDS 45.0%
GTCCCCGTAATGGTAATAGA+AGG + chr3_1:91979626-91979645 Msa0387860:CDS 45.0%
! AGGATTTGGCTTCTCTTGAC+AGG + chr3_1:91979939-91979958 Msa0387860:CDS 45.0%
! GGATTTGGCTTCTCTTGACA+GGG + chr3_1:91979940-91979959 Msa0387860:CDS 45.0%
! GACTTGTAAGTGCTGTACCA+AGG - chr3_1:91980001-91980020 None:intergenic 45.0%
ATAGAGAAGCGGAGTGTATG+AGG + chr3_1:91980026-91980045 Msa0387860:CDS 45.0%
TAGAGAAGCGGAGTGTATGA+GGG + chr3_1:91980027-91980046 Msa0387860:CDS 45.0%
AACTACACATTGGATCCCTG+CGG + chr3_1:91980217-91980236 Msa0387860:CDS 45.0%
GTGATATAAACAGGACCGCA+GGG - chr3_1:91980235-91980254 None:intergenic 45.0%
TGTGATATAAACAGGACCGC+AGG - chr3_1:91980236-91980255 None:intergenic 45.0%
!! TATATCACAGTTGGTGACGG+TGG + chr3_1:91980247-91980266 Msa0387860:CDS 45.0%
AATGGTTCAGGACAGTTTCC+TGG - chr3_1:91980310-91980329 None:intergenic 45.0%
GAATTTACCTGTTGCTGGAC+CGG - chr3_1:91980383-91980402 None:intergenic 45.0%
!! ATTTATTAAATTAAATGTAA+AGG - chr3_1:91975471-91975490 None:intergenic 5.0%
!!! AAATATTTTTATTTTATTAG+GGG - chr3_1:91976347-91976366 None:intergenic 5.0%
!! ATATATAATCAAATATATTA+AGG + chr3_1:91976733-91976752 Msa0387860:intron 5.0%
!! ATATATTTATTATTATTTAC+TGG + chr3_1:91976979-91976998 Msa0387860:intron 5.0%
!! TATATTTATTATTATTTACT+GGG + chr3_1:91976980-91976999 Msa0387860:intron 5.0%
!!! TATTTTTTTTTACTTTAAAA+TGG + chr3_1:91977753-91977772 Msa0387860:intron 5.0%
!!! TATTAAAATAATAATTTTCA+TGG - chr3_1:91977987-91978006 None:intergenic 5.0%
!! TAAAAAAATATTAATGAAAT+TGG - chr3_1:91978413-91978432 None:intergenic 5.0%
CAACCGTGTCACGATTTCTG+AGG + chr3_1:91974466-91974485 Msa0387860:intron 50.0%
GGCCGAATGCATGTTTGTCT+TGG + chr3_1:91974488-91974507 Msa0387860:intron 50.0%
!! TGACACGATTTTCGGCTTGC+TGG + chr3_1:91974542-91974561 Msa0387860:intron 50.0%
!! GACACGATTTTCGGCTTGCT+GGG + chr3_1:91974543-91974562 Msa0387860:intron 50.0%
!! CTGGGCACGTTTTCAGGATA+AGG + chr3_1:91974561-91974580 Msa0387860:intron 50.0%
! GGATAAGGTTGGTCGTACCT+TGG + chr3_1:91974576-91974595 Msa0387860:intron 50.0%
CGATTGATACGTACGACCCA+AGG - chr3_1:91974596-91974615 None:intergenic 50.0%
TGGGTCGTACGTATCAATCG+TGG + chr3_1:91974596-91974615 Msa0387860:intron 50.0%
AACCAAAAGAGGGGGCTCTT+GGG + chr3_1:91974807-91974826 Msa0387860:intron 50.0%
CCCCATGAATCTTCCCCAAA+AGG - chr3_1:91974846-91974865 None:intergenic 50.0%
TTGGGGAAGATTCATGGGGT+TGG + chr3_1:91974847-91974866 Msa0387860:intron 50.0%
TGGGGAAGATTCATGGGGTT+GGG + chr3_1:91974848-91974867 Msa0387860:intron 50.0%
ATCAATCTCTCCCCCAGAGT+AGG + chr3_1:91975168-91975187 Msa0387860:intron 50.0%
TCCAACTTGACCTACTCTGG+GGG - chr3_1:91975181-91975200 None:intergenic 50.0%
GTCCAACTTGACCTACTCTG+GGG - chr3_1:91975182-91975201 None:intergenic 50.0%
GGTCCAACTTGACCTACTCT+GGG - chr3_1:91975183-91975202 None:intergenic 50.0%
!! TAGGTCAAGTTGGACCGAAC+TGG + chr3_1:91975187-91975206 Msa0387860:intron 50.0%
!! AGGTCAAGTTGGACCGAACT+GGG + chr3_1:91975188-91975207 Msa0387860:intron 50.0%
AAGGGTCCATCCAATGTGGT+TGG - chr3_1:91975790-91975809 None:intergenic 50.0%
CTTGAAGGGTCCATCCAATG+TGG - chr3_1:91975794-91975813 None:intergenic 50.0%
!! GGAACTGTCACTGGCTTGAA+GGG - chr3_1:91975808-91975827 None:intergenic 50.0%
!! AGGAACTGTCACTGGCTTGA+AGG - chr3_1:91975809-91975828 None:intergenic 50.0%
! CCACGGAAGCTTTTGTCAAG+AGG - chr3_1:91975829-91975848 None:intergenic 50.0%
CCTCTTGACAAAAGCTTCCG+TGG + chr3_1:91975826-91975845 Msa0387860:CDS 50.0%
AGCCTCCAATTACCTAGGGA+CGG - chr3_1:91976302-91976321 None:intergenic 50.0%
TCCCTAGGTAATTGGAGGCT+CGG + chr3_1:91976302-91976321 Msa0387860:intron 50.0%
GGTCTTAAATGGGTCCCACA+TGG + chr3_1:91977848-91977867 Msa0387860:intron 50.0%
GGGGGTCTTAAGTTAGACCT+TGG + chr3_1:91978034-91978053 Msa0387860:intron 50.0%
CACCGATACTTCAGGGTTGA+AGG + chr3_1:91978763-91978782 Msa0387860:intron 50.0%
!! CGCATGAGTGTTGAACACCA+AGG - chr3_1:91978811-91978830 None:intergenic 50.0%
ACTCCTACTCTCTTTGCTGC+AGG + chr3_1:91979155-91979174 Msa0387860:intron 50.0%
TAACTCTTGGGGCCTGAAAC+TGG - chr3_1:91979266-91979285 None:intergenic 50.0%
GAGTTACCCTAGCAGAATCG+CGG + chr3_1:91979280-91979299 Msa0387860:CDS 50.0%
CTTCCCCAATAATCCCAACG+TGG - chr3_1:91979491-91979510 None:intergenic 50.0%
CACGTTGGGATTATTGGGGA+AGG + chr3_1:91979489-91979508 Msa0387860:CDS 50.0%
CATTTCCGTCGGAAGAGAGT+GGG + chr3_1:91979711-91979730 Msa0387860:CDS 50.0%
TTGACAGGGAAGTAACTCCG+TGG + chr3_1:91979954-91979973 Msa0387860:CDS 50.0%
GGAGTGTATGAGGGTTGAGA+TGG + chr3_1:91980036-91980055 Msa0387860:CDS 50.0%
!! CAGTTGGTGACGGTGGTAAT+CGG + chr3_1:91980254-91980273 Msa0387860:CDS 50.0%
!! AGTTGGTGACGGTGGTAATC+GGG + chr3_1:91980255-91980274 Msa0387860:CDS 50.0%
CGGTGGTAATCGGGAAAAGA+TGG + chr3_1:91980264-91980283 Msa0387860:CDS 50.0%
! TTTTCTTCCGGTCCAGCAAC+AGG + chr3_1:91980373-91980392 Msa0387860:CDS 50.0%
! GCTTTTCGCGAAAGCAGCTT+CGG + chr3_1:91980430-91980449 Msa0387860:CDS 50.0%
! TGTACCTCCTCTGGCTTAAC+TGG - chr3_1:91980651-91980670 None:intergenic 50.0%
GGCCCTCAGAAATCGTGACA+CGG - chr3_1:91974472-91974491 None:intergenic 55.0%
AGGTTGAGGGTCTTTGGGTG+AGG + chr3_1:91974755-91974774 Msa0387860:intron 55.0%
GAACCAAAAGAGGGGGCTCT+TGG + chr3_1:91974806-91974825 Msa0387860:intron 55.0%
! TTCCCAAGAGCCCCCTCTTT+TGG - chr3_1:91974812-91974831 None:intergenic 55.0%
AGAGGGGGCTCTTGGGAAAA+TGG + chr3_1:91974814-91974833 Msa0387860:intron 55.0%
GGGGCTCTTGGGAAAATGGT+TGG + chr3_1:91974818-91974837 Msa0387860:intron 55.0%
TCCCCCAGAGTAGGTCAAGT+TGG + chr3_1:91975177-91975196 Msa0387860:intron 55.0%
CGGTCCAACTTGACCTACTC+TGG - chr3_1:91975184-91975203 None:intergenic 55.0%
GTATGTCCACGGCGTTTCCA+CGG - chr3_1:91975846-91975865 None:intergenic 55.0%
ATGTATACAGGGCCGTCCCT+AGG + chr3_1:91976287-91976306 Msa0387860:intron 55.0%
GCCGAGCCTCCAATTACCTA+GGG - chr3_1:91976306-91976325 None:intergenic 55.0%
AGCCGAGCCTCCAATTACCT+AGG - chr3_1:91976307-91976326 None:intergenic 55.0%
TACATTCAGGCCCGGCTCTT+GGG - chr3_1:91977070-91977089 None:intergenic 55.0%
ATACATTCAGGCCCGGCTCT+TGG - chr3_1:91977071-91977090 None:intergenic 55.0%
TTACCCTAGCAGAATCGCGG+TGG + chr3_1:91979283-91979302 Msa0387860:CDS 55.0%
CAACCACCGCGATTCTGCTA+GGG - chr3_1:91979289-91979308 None:intergenic 55.0%
ATCGCGGTGGTTGGAGACTT+AGG + chr3_1:91979296-91979315 Msa0387860:CDS 55.0%
GCATTTCCGTCGGAAGAGAG+TGG + chr3_1:91979710-91979729 Msa0387860:CDS 55.0%
GATGACCCACTCTCTTCCGA+CGG - chr3_1:91979719-91979738 None:intergenic 55.0%
TAGCTACGTGGCATGCACCT+TGG + chr3_1:91979981-91980000 Msa0387860:CDS 55.0%
GCGAAAGCAGCTTCGGTCAT+GGG + chr3_1:91980437-91980456 Msa0387860:CDS 55.0%
CTTCGGTCATGGGATCCTAG+AGG + chr3_1:91980447-91980466 Msa0387860:CDS 55.0%
CAAGACTTGTATGGGACCGC+TGG + chr3_1:91980585-91980604 Msa0387860:CDS 55.0%
GTGTCCACCAGTTAAGCCAG+AGG + chr3_1:91980641-91980660 Msa0387860:CDS 55.0%
TCCACCAGTTAAGCCAGAGG+AGG + chr3_1:91980644-91980663 Msa0387860:CDS 55.0%
! ACCTCCTCTGGCTTAACTGG+TGG - chr3_1:91980648-91980667 None:intergenic 55.0%
!!! GGCTTGCTGGGCACGTTTTC+AGG + chr3_1:91974555-91974574 Msa0387860:intron 60.0%
AAGCTTCCGTGGAAACGCCG+TGG + chr3_1:91975837-91975856 Msa0387860:CDS 60.0%
CAGGGCCGTCCCTAGGTAAT+TGG + chr3_1:91976294-91976313 Msa0387860:intron 60.0%
GGCCGTCCCTAGGTAATTGG+AGG + chr3_1:91976297-91976316 Msa0387860:intron 60.0%
ATGAGGCCCATACCTTGGGG+AGG + chr3_1:91977017-91977036 Msa0387860:intron 60.0%
TCTGGGCCTCCCCAAGGTAT+GGG - chr3_1:91977026-91977045 None:intergenic 60.0%
ATCTGGGCCTCCCCAAGGTA+TGG - chr3_1:91977027-91977046 None:intergenic 60.0%
AATGGATCTGGGCCTCCCCA+AGG - chr3_1:91977032-91977051 None:intergenic 60.0%
! GGGGGGTGCAAACAGCTCAA+TGG - chr3_1:91977050-91977069 None:intergenic 60.0%
TGTTTGCACCCCCCAAGAGC+CGG + chr3_1:91977056-91977075 Msa0387860:intron 60.0%
ACATTCAGGCCCGGCTCTTG+GGG - chr3_1:91977069-91977088 None:intergenic 60.0%
GCGCCCAACATGTCAGTCCT+TGG + chr3_1:91978791-91978810 Msa0387860:intron 60.0%
CCAACCACCGCGATTCTGCT+AGG - chr3_1:91979290-91979309 None:intergenic 60.0%
CCTAGCAGAATCGCGGTGGT+TGG + chr3_1:91979287-91979306 Msa0387860:CDS 60.0%
CAGGGAAGTAACTCCGTGGC+TGG + chr3_1:91979958-91979977 Msa0387860:CDS 60.0%
TGCCACGTAGCTACCAGCCA+CGG - chr3_1:91979974-91979993 None:intergenic 60.0%
CGCGAAAGCAGCTTCGGTCA+TGG + chr3_1:91980436-91980455 Msa0387860:CDS 60.0%
GTTTGCACCCCCCAAGAGCC+GGG + chr3_1:91977057-91977076 Msa0387860:intron 65.0%
ATTCAGGCCCGGCTCTTGGG+GGG - chr3_1:91977067-91977086 None:intergenic 65.0%
CATTCAGGCCCGGCTCTTGG+GGG - chr3_1:91977068-91977087 None:intergenic 65.0%
CTCCGTGGCTGGTAGCTACG+TGG + chr3_1:91979969-91979988 Msa0387860:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 91974385 91980717 91974385 ID=Msa0387860;Name=Msa0387860
chr3_1 mRNA 91974385 91980717 91974385 ID=Msa0387860-mRNA-1;Parent=Msa0387860;Name=Msa0387860-mRNA-1;_AED=0.28;_eAED=0.28;_QI=328|1|1|1|0.85|0.75|8|37|543
chr3_1 exon 91974385 91974406 91974385 ID=Msa0387860-mRNA-1:exon:25751;Parent=Msa0387860-mRNA-1
chr3_1 exon 91975394 91975973 91975394 ID=Msa0387860-mRNA-1:exon:25752;Parent=Msa0387860-mRNA-1
chr3_1 exon 91978503 91978694 91978503 ID=Msa0387860-mRNA-1:exon:25753;Parent=Msa0387860-mRNA-1
chr3_1 exon 91979177 91979510 91979177 ID=Msa0387860-mRNA-1:exon:25754;Parent=Msa0387860-mRNA-1
chr3_1 exon 91979601 91979818 91979601 ID=Msa0387860-mRNA-1:exon:25755;Parent=Msa0387860-mRNA-1
chr3_1 exon 91979915 91980105 91979915 ID=Msa0387860-mRNA-1:exon:25756;Parent=Msa0387860-mRNA-1
chr3_1 exon 91980184 91980468 91980184 ID=Msa0387860-mRNA-1:exon:25757;Parent=Msa0387860-mRNA-1
chr3_1 exon 91980543 91980717 91980543 ID=Msa0387860-mRNA-1:exon:25758;Parent=Msa0387860-mRNA-1
chr3_1 five_prime_UTR 91974385 91974406 91974385 ID=Msa0387860-mRNA-1:five_prime_utr;Parent=Msa0387860-mRNA-1
chr3_1 five_prime_UTR 91975394 91975699 91975394 ID=Msa0387860-mRNA-1:five_prime_utr;Parent=Msa0387860-mRNA-1
chr3_1 CDS 91975700 91975973 91975700 ID=Msa0387860-mRNA-1:cds;Parent=Msa0387860-mRNA-1
chr3_1 CDS 91978503 91978694 91978503 ID=Msa0387860-mRNA-1:cds;Parent=Msa0387860-mRNA-1
chr3_1 CDS 91979177 91979510 91979177 ID=Msa0387860-mRNA-1:cds;Parent=Msa0387860-mRNA-1
chr3_1 CDS 91979601 91979818 91979601 ID=Msa0387860-mRNA-1:cds;Parent=Msa0387860-mRNA-1
chr3_1 CDS 91979915 91980105 91979915 ID=Msa0387860-mRNA-1:cds;Parent=Msa0387860-mRNA-1
chr3_1 CDS 91980184 91980468 91980184 ID=Msa0387860-mRNA-1:cds;Parent=Msa0387860-mRNA-1
chr3_1 CDS 91980543 91980680 91980543 ID=Msa0387860-mRNA-1:cds;Parent=Msa0387860-mRNA-1
chr3_1 three_prime_UTR 91980681 91980717 91980681 ID=Msa0387860-mRNA-1:three_prime_utr;Parent=Msa0387860-mRNA-1
Gene Sequence

>Msa0387860

ATGGGTTTTGTTTTGGTGTCTCCTCATGTTGTTACACTGTCTCTGTTGTTATTTTCACTATGTTCAATCCTTGTTCATGGTGTAGTTCCAACCACATTGGATGGACCCTTCAAGCCAGTGACAGTTCCTCTTGACAAAAGCTTCCGTGGAAACGCCGTGGACATACCAGACACAGATCCTCTTGTTCAAAGAAATGTCGAAGGTTTTCAACCTGAACAAATCTCTCTCTCACTCTCTACCTCTCATGACTCTGTTTGGATTTCTTGGATTACAGGAGAATTCCAAATTGGGGAGAATATAGAACCATTAAATCCTGAAACAGTTGGTAGCATAGTTCAATATGGAAGGTTTGGAAGATCAATGAATGGTCAAGCTGTTGGTTATTCCCTTGTGTATAGTCAGCTATATCCTTTTGAAGGACTTCACAACTATACTTCTGGAATTATACATCATGTTCGTATCACAGGATTAAAACCTAACACACTATATCAATATCAATGCGGAGATCCTTCTTTGTCAGCAATGAGTGATGTTCATTATTTCAGAACAATGCCAGTTTCAGGCCCCAAGAGTTACCCTAGCAGAATCGCGGTGGTTGGAGACTTAGGTCTTACATACAATACCACATCCACTGTCAATCATATGATCAGCAATCATCCTGATCTTATTCTATTGGTTGGAGATGCTAGTTATGCTAACATGTATCTTACTAATGGTACTGGTTCAGATTGCTACTCTTGTTCATTTTCAAATACTCCCATCCATGAAACATATCAACCACGTTGGGATTATTGGGGAAGGTACATGGAACCATTGATTTCTAGTGTCCCCGTAATGGTAATAGAAGGGAATCATGAGATAGAAGAACAAGCTGAAAACAAGACATTTGTTGCTTATAGTTCTCGATTTGCATTTCCGTCGGAAGAGAGTGGGTCATCTTCAACTTTATATTATTCTTTCAATGCTGGAGGAATACATTTTATAATGCTCGGTTCCTACATATCATACGACAAATCAGGGGATCAATACAAATGGTTGGAAAAGGATTTGGCTTCTCTTGACAGGGAAGTAACTCCGTGGCTGGTAGCTACGTGGCATGCACCTTGGTACAGCACTTACAAGTCACATTATAGAGAAGCGGAGTGTATGAGGGTTGAGATGGAAGATTTACTATATAAATATGGTGTTGACATTGTCTTTAACGGACATGTTCATGCCTATGAGAGATCAAACCGTGTATATAACTACACATTGGATCCCTGCGGTCCTGTTTATATCACAGTTGGTGACGGTGGTAATCGGGAAAAGATGGCAATTACTCATGCAGATGAACCAGGAAACTGTCCTGAACCATTAACTACACCAGATAAATTTATGAGAGGCTTCTGCGCCTTCAATTTTTCTTCCGGTCCAGCAACAGGTAAATTCTGTTGGGACCAACAGCCTGATTATAGTGCTTTTCGCGAAAGCAGCTTCGGTCATGGGATCCTAGAGGTGAAGAATGAAACTCATGCATTATGGATTTGGAACCGCAATCAAGACTTGTATGGGACCGCTGGTGATGAAATTTACATTGTTAGGCAACCTGATAAGTGTCCACCAGTTAAGCCAGAGGAGGTACATAAAACATGA
Protein sequence

>Msa0387860

MGFVLVSPHVVTLSLLLFSLCSILVHGVVPTTLDGPFKPVTVPLDKSFRGNAVDIPDTDPLVQRNVEGFQPEQISLSLSTSHDSVWISWITGEFQIGENIEPLNPETVGSIVQYGRFGRSMNGQAVGYSLVYSQLYPFEGLHNYTSGIIHHVRITGLKPNTLYQYQCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLTYNTTSTVNHMISNHPDLILLVGDASYANMYLTNGTGSDCYSCSFSNTPIHETYQPRWDYWGRYMEPLISSVPVMVIEGNHEIEEQAENKTFVAYSSRFAFPSEESGSSSTLYYSFNAGGIHFIMLGSYISYDKSGDQYKWLEKDLASLDREVTPWLVATWHAPWYSTYKSHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEPGNCPEPLTTPDKFMRGFCAFNFSSGPATGKFCWDQQPDYSAFRESSFGHGILEVKNETHALWIWNRNQDLYGTAGDEIYIVRQPDKCPPVKPEEVHKT*