Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0388880 | Msa0388890 | 0.878374 | 2.958394e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 20 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAACTTAGAACAGAATT+TGG | 0.242473 | 3_1:-93351022 | None:intergenic |
| AAATGATATTAGCAATCATT+TGG | 0.401830 | 3_1:+93351149 | None:intergenic |
| GAGTGGCAACATAAGATTCA+TGG | 0.443820 | 3_1:-93351275 | Msa0388880:CDS |
| AAGCTTCTTTGGAACTCTGA+AGG | 0.525980 | 3_1:-93353464 | Msa0388880:intron |
| CATTTGGAGTGCAATCAGAA+AGG | 0.530740 | 3_1:+93351165 | None:intergenic |
| TCAATCACAACCTTGGTGGC+AGG | 0.533781 | 3_1:+93351115 | None:intergenic |
| CATGAGCTGAGCAAAACTAC+TGG | 0.538533 | 3_1:-93352857 | Msa0388880:CDS |
| AGCAAAACTACTGGAAATGC+AGG | 0.541389 | 3_1:-93352848 | Msa0388880:CDS |
| AGTGGCAACATAAGATTCAT+GGG | 0.563520 | 3_1:-93351274 | Msa0388880:CDS |
| ATCAACAACGACCTTGGTGG+CGG | 0.572454 | 3_1:-93351238 | Msa0388880:CDS |
| CATATCAATCACAACCTTGG+TGG | 0.578162 | 3_1:+93351111 | None:intergenic |
| CATATCAACAACGACCTTGG+TGG | 0.587061 | 3_1:-93351241 | Msa0388880:CDS |
| AGACATATCAACAACGACCT+TGG | 0.591658 | 3_1:-93351244 | Msa0388880:CDS |
| TCTTGTAGCAAGATCATCAA+AGG | 0.594386 | 3_1:-93351472 | Msa0388880:intron |
| TGGCGGTTACATCATCATGA+AGG | 0.595175 | 3_1:-93351221 | Msa0388880:CDS |
| AGACATATCAATCACAACCT+TGG | 0.611500 | 3_1:+93351108 | None:intergenic |
| TGATAATGTACCTGCCACCA+AGG | 0.660264 | 3_1:-93351125 | Msa0388880:CDS |
| TGATGATGTAACCGCCACCA+AGG | 0.665434 | 3_1:+93351227 | None:intergenic |
| ACGGACAACTACATCAAGAG+TGG | 0.672547 | 3_1:-93351292 | Msa0388880:CDS |
| GCAGGTGCAAGAGTAGCATG+CGG | 0.736736 | 3_1:-93352830 | Msa0388880:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTATTTATAATTTAATAC+CGG | - | chr3_1:93351271-93351290 | Msa0388880:CDS | 10.0% |
| !! | CGGTATTAAATTATAAATAA+AGG | + | chr3_1:93351273-93351292 | None:intergenic | 15.0% |
| !! | ATAGAAAAAATAAGAATGAA+AGG | - | chr3_1:93351387-93351406 | Msa0388880:intron | 15.0% |
| !! | TAAAAAAAAAGCTCAAAAAT+TGG | + | chr3_1:93351610-93351629 | None:intergenic | 15.0% |
| !!! | TTTGAGCTTTTTTTTTATAA+TGG | - | chr3_1:93351613-93351632 | Msa0388880:intron | 15.0% |
| !! | TTCATCAATAATATGAATAA+TGG | + | chr3_1:93351707-93351726 | None:intergenic | 15.0% |
| !! | TTCTTATCAAAATATTAGAT+TGG | - | chr3_1:93351818-93351837 | Msa0388880:intron | 15.0% |
| !!! | TTTATAATTTAATACCGGTT+AGG | - | chr3_1:93351276-93351295 | Msa0388880:CDS | 20.0% |
| !! | ATTTAAGAAGTTTGTATGAA+AGG | - | chr3_1:93351423-93351442 | Msa0388880:intron | 20.0% |
| !! | TTTATTGAATGATTGAGAAT+AGG | + | chr3_1:93351492-93351511 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTATAATGGAAC+AGG | - | chr3_1:93351619-93351638 | Msa0388880:intron | 20.0% |
| !! | AGTAGATTATGATTTATTAC+TGG | + | chr3_1:93351739-93351758 | None:intergenic | 20.0% |
| !! | TGAATTATTGAAATGTTGTA+TGG | + | chr3_1:93351904-93351923 | None:intergenic | 20.0% |
| !!! | GTTGGATTAATATTTTATCT+CGG | - | chr3_1:93351984-93352003 | Msa0388880:intron | 20.0% |
| !!! | ACATGATTGTAATTTTCATA+GGG | + | chr3_1:93352353-93352372 | None:intergenic | 20.0% |
| !!! | AACATGATTGTAATTTTCAT+AGG | + | chr3_1:93352354-93352373 | None:intergenic | 20.0% |
| !! | TTTGATCTTATACAAATTTC+AGG | - | chr3_1:93352495-93352514 | Msa0388880:intron | 20.0% |
| !! | ACGAAGAAAATAAAAGTTAA+TGG | - | chr3_1:93352874-93352893 | Msa0388880:intron | 20.0% |
| !! | AAAGTTAATGGAAATCTAAA+AGG | - | chr3_1:93352886-93352905 | Msa0388880:intron | 20.0% |
| !! | AAGTTAATGGAAATCTAAAA+GGG | - | chr3_1:93352887-93352906 | Msa0388880:intron | 20.0% |
| !! | AAATGATATTAGCAATCATT+TGG | + | chr3_1:93353357-93353376 | None:intergenic | 20.0% |
| !!! | TTTTTTTATAATGGAACAGG+TGG | - | chr3_1:93351622-93351641 | Msa0388880:intron | 25.0% |
| ! | ATTCAGTAAGTAAATGAAGT+AGG | - | chr3_1:93351919-93351938 | Msa0388880:intron | 25.0% |
| ! | TAATCTTAATATGAGAGGAA+TGG | - | chr3_1:93352073-93352092 | Msa0388880:intron | 25.0% |
| !! | CTTTGAAGATCTATTATTTG+TGG | + | chr3_1:93352304-93352323 | None:intergenic | 25.0% |
| ! | TTTGGGTCGTAATTAAATAT+TGG | - | chr3_1:93352736-93352755 | Msa0388880:intron | 25.0% |
| !! | TTCTTCTTTTGATATGAAGA+CGG | - | chr3_1:93353192-93353211 | Msa0388880:intron | 25.0% |
| !!! | GAAGGATTTTAACAATCATT+TGG | - | chr3_1:93353300-93353319 | Msa0388880:intron | 25.0% |
| !! | TTCTTCTTTTGATATGAAGA+CGG | + | chr3_1:93353192-93353211 | None:intergenic | 25.0% |
| AACACAACTAACATGTCAAT+GGG | + | chr3_1:93351097-93351116 | None:intergenic | 30.0% | |
| TTGAATATAATCACACGTGT+TGG | + | chr3_1:93351161-93351180 | None:intergenic | 30.0% | |
| AGAGAAGCTATATAGTTAGA+AGG | - | chr3_1:93351358-93351377 | Msa0388880:intron | 30.0% | |
| GAGAAGCTATATAGTTAGAA+GGG | - | chr3_1:93351359-93351378 | Msa0388880:intron | 30.0% | |
| AAAGGAAAAATCCTTTGTGA+AGG | - | chr3_1:93351441-93351460 | Msa0388880:intron | 30.0% | |
| AATTTACTACTTCCTCTCTT+TGG | - | chr3_1:93351541-93351560 | Msa0388880:intron | 30.0% | |
| CATCATGACATAAACTCAAA+CGG | + | chr3_1:93351860-93351879 | None:intergenic | 30.0% | |
| CAGTACCATGATTAATCTAA+AGG | + | chr3_1:93352010-93352029 | None:intergenic | 30.0% | |
| TTAGATTAATCATGGTACTG+AGG | - | chr3_1:93352010-93352029 | Msa0388880:intron | 30.0% | |
| CCTCTCATATTAAGATTATC+CGG | + | chr3_1:93352071-93352090 | None:intergenic | 30.0% | |
| ACATTTCTGTCTTATGCTAA+CGG | + | chr3_1:93352173-93352192 | None:intergenic | 30.0% | |
| CAAATGTTGAAACTACTCAA+GGG | + | chr3_1:93352479-93352498 | None:intergenic | 30.0% | |
| TCAAATGTTGAAACTACTCA+AGG | + | chr3_1:93352480-93352499 | None:intergenic | 30.0% | |
| TACAATACACCAAAAATGGT+GGG | + | chr3_1:93352613-93352632 | None:intergenic | 30.0% | |
| TGTGTACAATACACCAAAAA+TGG | + | chr3_1:93352617-93352636 | None:intergenic | 30.0% | |
| GATGATCGAAACATGTATTT+CGG | - | chr3_1:93352837-93352856 | Msa0388880:CDS | 30.0% | |
| TGAAAGACTTTCTTCTTCAA+AGG | + | chr3_1:93353123-93353142 | None:intergenic | 30.0% | |
| ! | GCTTTTCTTCTAAGCTTCTT+TGG | - | chr3_1:93351028-93351047 | Msa0388880:CDS | 35.0% |
| CAACACAACTAACATGTCAA+TGG | + | chr3_1:93351098-93351117 | None:intergenic | 35.0% | |
| ACATCTTCAATGTGAAGTGT+CGG | + | chr3_1:93351123-93351142 | None:intergenic | 35.0% | |
| ATTGAAGATGTATCCAATGC+CGG | - | chr3_1:93351132-93351151 | Msa0388880:CDS | 35.0% | |
| ! | TTTAATACCGGTTAGGATAG+AGG | - | chr3_1:93351283-93351302 | Msa0388880:CDS | 35.0% |
| ! | TTAATACCGGTTAGGATAGA+GGG | - | chr3_1:93351284-93351303 | Msa0388880:CDS | 35.0% |
| CAATAATTCCACCTTCACAA+AGG | + | chr3_1:93351455-93351474 | None:intergenic | 35.0% | |
| TGTGAAGGTGGAATTATTGA+AGG | - | chr3_1:93351456-93351475 | Msa0388880:intron | 35.0% | |
| TGAATGATTGAGAATAGGAG+AGG | + | chr3_1:93351487-93351506 | None:intergenic | 35.0% | |
| GTTGTTATGAATCCAAAGAG+AGG | + | chr3_1:93351556-93351575 | None:intergenic | 35.0% | |
| ATGTTGTATGGTATGAGTCA+AGG | + | chr3_1:93351892-93351911 | None:intergenic | 35.0% | |
| ! | GTAAATGAAGTAGGTTGACT+TGG | - | chr3_1:93351928-93351947 | Msa0388880:intron | 35.0% |
| CCGGATAATCTTAATATGAG+AGG | - | chr3_1:93352068-93352087 | Msa0388880:intron | 35.0% | |
| CAGCTATAGAGAAATCAACT+TGG | + | chr3_1:93352134-93352153 | None:intergenic | 35.0% | |
| AACTATCCTAAACAGATGAC+TGG | + | chr3_1:93352278-93352297 | None:intergenic | 35.0% | |
| ! | AGTCATCTGTTTAGGATAGT+TGG | - | chr3_1:93352277-93352296 | Msa0388880:intron | 35.0% |
| ! | TCAAGTTGTTCTATGCGTAA+TGG | - | chr3_1:93352424-93352443 | Msa0388880:intron | 35.0% |
| TGTTCTATGCGTAATGGTTT+CGG | - | chr3_1:93352430-93352449 | Msa0388880:intron | 35.0% | |
| ! | AAGAATAGAAAAGTGCAACC+CGG | - | chr3_1:93352547-93352566 | Msa0388880:intron | 35.0% |
| GTACAATACACCAAAAATGG+TGG | + | chr3_1:93352614-93352633 | None:intergenic | 35.0% | |
| !!! | TACCCTGTTTTTGACATAAG+AGG | - | chr3_1:93352641-93352660 | Msa0388880:intron | 35.0% |
| AGCCTCTTATGTCAAAAACA+GGG | + | chr3_1:93352646-93352665 | None:intergenic | 35.0% | |
| AAATTTAACCTTGGCACAAC+TGG | + | chr3_1:93352719-93352738 | None:intergenic | 35.0% | |
| AGTTGTGCCAAGGTTAAATT+TGG | - | chr3_1:93352718-93352737 | Msa0388880:intron | 35.0% | |
| GTTGTGCCAAGGTTAAATTT+GGG | - | chr3_1:93352719-93352738 | Msa0388880:intron | 35.0% | |
| TTACGACCCAAATTTAACCT+TGG | + | chr3_1:93352728-93352747 | None:intergenic | 35.0% | |
| GTTTCTCAAATCTCACTTGT+CGG | + | chr3_1:93352762-93352781 | None:intergenic | 35.0% | |
| AGAATACTTGAGACAAGCAT+GGG | + | chr3_1:93352925-93352944 | None:intergenic | 35.0% | |
| AAGAATACTTGAGACAAGCA+TGG | + | chr3_1:93352926-93352945 | None:intergenic | 35.0% | |
| TCTTGTAGCAAGATCATCAA+AGG | - | chr3_1:93353031-93353050 | Msa0388880:intron | 35.0% | |
| ! | TCAAAGGAGAGTTTTCAACA+TGG | + | chr3_1:93353107-93353126 | None:intergenic | 35.0% |
| AGTGGCAACATAAGATTCAT+GGG | - | chr3_1:93353229-93353248 | Msa0388880:intron | 35.0% | |
| AGACATATCAATCACAACCT+TGG | + | chr3_1:93353398-93353417 | None:intergenic | 35.0% | |
| !! | AAGCTTCTTTGGAACTCTGA+AGG | - | chr3_1:93351039-93351058 | Msa0388880:CDS | 40.0% |
| CGACATTGACACATTAACAC+TGG | + | chr3_1:93351207-93351226 | None:intergenic | 40.0% | |
| GGAAAAATCCTTTGTGAAGG+TGG | - | chr3_1:93351444-93351463 | Msa0388880:intron | 40.0% | |
| AGCAAAACTACTGGAAATGC+AGG | - | chr3_1:93351655-93351674 | Msa0388880:intron | 40.0% | |
| TTGTATGGTATGAGTCAAGG+AGG | + | chr3_1:93351889-93351908 | None:intergenic | 40.0% | |
| CAGCCTCTCAAGTCAAATTT+CGG | - | chr3_1:93351959-93351978 | Msa0388880:intron | 40.0% | |
| TCAAGTCAAATTTCGGCTGT+TGG | - | chr3_1:93351966-93351985 | Msa0388880:intron | 40.0% | |
| CTCGGCCTTTAGATTAATCA+TGG | - | chr3_1:93352002-93352021 | Msa0388880:intron | 40.0% | |
| ! | TTAATCATGGTACTGAGGTG+TGG | - | chr3_1:93352015-93352034 | Msa0388880:intron | 40.0% |
| ACAATTGCTAATTGCTGACC+AGG | - | chr3_1:93352240-93352259 | Msa0388880:intron | 40.0% | |
| AATTGCTGACCAGGTATCAT+TGG | - | chr3_1:93352249-93352268 | Msa0388880:intron | 40.0% | |
| TGTTGAAACTACTCAAGGGA+AGG | + | chr3_1:93352475-93352494 | None:intergenic | 40.0% | |
| CAGCCTCTTATGTCAAAAAC+AGG | + | chr3_1:93352647-93352666 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr3_1:93352692-93352711 | None:intergenic | 40.0% | |
| CTAGCAAATGGAAGATTTGG+AGG | + | chr3_1:93352964-93352983 | None:intergenic | 40.0% | |
| CGACTAGCAAATGGAAGATT+TGG | + | chr3_1:93352967-93352986 | None:intergenic | 40.0% | |
| TTCTGATCTCGACTAGCAAA+TGG | + | chr3_1:93352976-93352995 | None:intergenic | 40.0% | |
| TCAACATGGTAGGACATAGA+AGG | + | chr3_1:93353093-93353112 | None:intergenic | 40.0% | |
| ! | AGGAGAGTTTTCAACATGGT+AGG | + | chr3_1:93353103-93353122 | None:intergenic | 40.0% |
| GAGTGGCAACATAAGATTCA+TGG | - | chr3_1:93353228-93353247 | Msa0388880:intron | 40.0% | |
| AGACATATCAACAACGACCT+TGG | - | chr3_1:93353259-93353278 | Msa0388880:intron | 40.0% | |
| ! | CATTTGGAGTGCAATCAGAA+AGG | + | chr3_1:93353341-93353360 | None:intergenic | 40.0% |
| CATATCAATCACAACCTTGG+TGG | + | chr3_1:93353395-93353414 | None:intergenic | 40.0% | |
| ! | TAATCACACGTGTTGGTGTC+CGG | + | chr3_1:93351154-93351173 | None:intergenic | 45.0% |
| GATTCTCCCTCTATCCTAAC+CGG | + | chr3_1:93351293-93351312 | None:intergenic | 45.0% | |
| CATGAGCTGAGCAAAACTAC+TGG | - | chr3_1:93351646-93351665 | Msa0388880:intron | 45.0% | |
| ! | TTGACTTGAGAGGCTGCATA+GGG | + | chr3_1:93351955-93351974 | None:intergenic | 45.0% |
| !! | TTTGACTTGAGAGGCTGCAT+AGG | + | chr3_1:93351956-93351975 | None:intergenic | 45.0% |
| !! | CAGCCGAAATTTGACTTGAG+AGG | + | chr3_1:93351965-93351984 | None:intergenic | 45.0% |
| CTTATGCTAACGGTCTACAG+CGG | + | chr3_1:93352163-93352182 | None:intergenic | 45.0% | |
| TGGACTCCAGTCATCTGTTT+AGG | - | chr3_1:93352269-93352288 | Msa0388880:intron | 45.0% | |
| AAGGCAAACTAAGGTTGCCT+TGG | + | chr3_1:93352456-93352475 | None:intergenic | 45.0% | |
| ACTCAAGGGAAGGCAAACTA+AGG | + | chr3_1:93352465-93352484 | None:intergenic | 45.0% | |
| ! | TGACATAAGAGGCTGTTTCC+AGG | - | chr3_1:93352652-93352671 | Msa0388880:intron | 45.0% |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr3_1:93352685-93352704 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr3_1:93352686-93352705 | None:intergenic | 45.0% | |
| CAACTTTACCAGTTGTGCCA+AGG | - | chr3_1:93352708-93352727 | Msa0388880:intron | 45.0% | |
| ACGGACAACTACATCAAGAG+TGG | - | chr3_1:93353211-93353230 | Msa0388880:intron | 45.0% | |
| CATATCAACAACGACCTTGG+TGG | - | chr3_1:93353262-93353281 | Msa0388880:intron | 45.0% | |
| TGGCGGTTACATCATCATGA+AGG | - | chr3_1:93353282-93353301 | Msa0388880:intron | 45.0% | |
| ! | TGATAATGTACCTGCCACCA+AGG | - | chr3_1:93353378-93353397 | Msa0388880:intron | 45.0% |
| !! | CTTTGGAACTCTGAAGGTCC+AGG | - | chr3_1:93351045-93351064 | Msa0388880:CDS | 50.0% |
| AACAGAGCAGTAGTCCATCC+TGG | + | chr3_1:93351066-93351085 | None:intergenic | 50.0% | |
| TCCGATGTCCATGTCTGCAT+CGG | - | chr3_1:93351229-93351248 | Msa0388880:CDS | 50.0% | |
| ACCGATGCAGACATGGACAT+CGG | + | chr3_1:93351233-93351252 | None:intergenic | 50.0% | |
| AGATTATCCGGCTTCCACAC+TGG | + | chr3_1:93352059-93352078 | None:intergenic | 50.0% | |
| GACTGGAGTCCAATGATACC+TGG | + | chr3_1:93352261-93352280 | None:intergenic | 50.0% | |
| ATGCGTAATGGTTTCGGCCA+AGG | - | chr3_1:93352436-93352455 | Msa0388880:intron | 50.0% | |
| ATCAACAACGACCTTGGTGG+CGG | - | chr3_1:93353265-93353284 | Msa0388880:intron | 50.0% | |
| ! | TGATGATGTAACCGCCACCA+AGG | + | chr3_1:93353279-93353298 | None:intergenic | 50.0% |
| ! | TCAATCACAACCTTGGTGGC+AGG | + | chr3_1:93353391-93353410 | None:intergenic | 50.0% |
| ! | GGAACTCTGAAGGTCCAGGA+TGG | - | chr3_1:93351049-93351068 | Msa0388880:CDS | 55.0% |
| !! | ACGAAGCACCGATGCAGACA+TGG | + | chr3_1:93351240-93351259 | None:intergenic | 55.0% |
| GCAGGTGCAAGAGTAGCATG+CGG | - | chr3_1:93351673-93351692 | Msa0388880:intron | 55.0% | |
| TTCCACACTGGATCCTCTGC+AGG | + | chr3_1:93352047-93352066 | None:intergenic | 55.0% | |
| AGAGGATCCAGTGTGGAAGC+CGG | - | chr3_1:93352049-93352068 | Msa0388880:intron | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr3_1:93352569-93352588 | None:intergenic | 55.0% |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr3_1:93352573-93352592 | Msa0388880:intron | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr3_1:93352574-93352593 | Msa0388880:intron | 55.0% | |
| ! | AAAATGGTGGGACCCCTTCC+CGG | + | chr3_1:93352601-93352620 | None:intergenic | 55.0% |
| ! | GGAAGGGGTCCCACCATTTT+TGG | - | chr3_1:93352601-93352620 | Msa0388880:intron | 55.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr3_1:93352673-93352692 | None:intergenic | 55.0% | |
| ! | CACGTGTTGGTGTCCGGCAT+TGG | + | chr3_1:93351148-93351167 | None:intergenic | 60.0% |
| AGCCTGCAGAGGATCCAGTG+TGG | - | chr3_1:93352042-93352061 | Msa0388880:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr3_1:93352568-93352587 | None:intergenic | 60.0% |
| GGTGTGGCTAGAGCCTGCAG+AGG | - | chr3_1:93352031-93352050 | Msa0388880:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr3_1:93352585-93352604 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr3_1:93352586-93352605 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr3_1:93352585-93352604 | Msa0388880:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr3_1:93352586-93352605 | Msa0388880:intron | 65.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr3_1:93352579-93352598 | Msa0388880:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr3_1:93352580-93352599 | Msa0388880:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr3_1:93352584-93352603 | Msa0388880:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 93351024 | 93353501 | 93351024 | ID=Msa0388880;Name=Msa0388880 |
| chr3_1 | mRNA | 93351024 | 93353501 | 93351024 | ID=Msa0388880-mRNA-1;Parent=Msa0388880;Name=Msa0388880-mRNA-1;_AED=0.91;_eAED=0.91;_QI=0|0|0.25|0.25|0.66|0.5|4|0|132 |
| chr3_1 | exon | 93353465 | 93353501 | 93353465 | ID=Msa0388880-mRNA-1:exon:26430;Parent=Msa0388880-mRNA-1 |
| chr3_1 | exon | 93352831 | 93352884 | 93352831 | ID=Msa0388880-mRNA-1:exon:26429;Parent=Msa0388880-mRNA-1 |
| chr3_1 | exon | 93351473 | 93351486 | 93351473 | ID=Msa0388880-mRNA-1:exon:26428;Parent=Msa0388880-mRNA-1 |
| chr3_1 | exon | 93351024 | 93351314 | 93351024 | ID=Msa0388880-mRNA-1:exon:26427;Parent=Msa0388880-mRNA-1 |
| chr3_1 | CDS | 93353465 | 93353501 | 93353465 | ID=Msa0388880-mRNA-1:cds;Parent=Msa0388880-mRNA-1 |
| chr3_1 | CDS | 93352831 | 93352884 | 93352831 | ID=Msa0388880-mRNA-1:cds;Parent=Msa0388880-mRNA-1 |
| chr3_1 | CDS | 93351473 | 93351486 | 93351473 | ID=Msa0388880-mRNA-1:cds;Parent=Msa0388880-mRNA-1 |
| chr3_1 | CDS | 93351024 | 93351314 | 93351024 | ID=Msa0388880-mRNA-1:cds;Parent=Msa0388880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
