AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0389540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389540 MtrunA17_Chr4g0039621 94.002 817 24 4 1 803 1 806 0.0 1537
Msa0389540 MtrunA17_Chr4g0068571 77.728 449 75 4 138 572 6 443 0.0 695
Msa0389540 MtrunA17_Chr4g0068561 84.444 180 27 1 624 803 21 199 1.74e-102 314
Msa0389540 MtrunA17_Chr4g0068581 60.000 180 32 1 1 140 1 180 5.86e-71 231
Msa0389540 MtrunA17_Chr3g0128701 41.057 246 127 3 575 803 144 388 1.44e-44 165
Msa0389540 MtrunA17_Chr1g0212481 25.522 623 337 25 19 595 59 600 1.30e-38 152
Msa0389540 MtrunA17_Chr4g0019821 47.619 168 74 2 645 802 93 256 2.55e-37 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389540 AT4G13780.1 70.049 818 209 10 1 803 1 797 0.0 1168
Msa0389540 AT2G40660.1 50.000 164 81 1 640 803 227 389 3.23e-43 162
Msa0389540 AT3G59980.1 46.746 169 82 2 641 802 105 272 3.29e-37 141
Msa0389540 AT3G55400.1 24.700 583 349 19 13 573 67 581 1.40e-31 131
Msa0389540 AT3G55400.2 26.000 500 289 16 13 494 67 503 3.41e-30 126
Msa0389540 AT5G02680.1 83.333 36 6 0 371 406 54 89 3.63e-11 62.0

Find 234 sgRNAs with CRISPR-Local

Find 936 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGGAGTTGTTTCAGTTTA+TGG 0.110658 3_1:-94416582 Msa0389540:CDS
AATATAAGCTTTGATGAATT+TGG 0.147482 3_1:-94418326 Msa0389540:CDS
AACAAATTCATGGTTCAAAA+TGG 0.185409 3_1:-94416854 Msa0389540:CDS
TTTCCGATCTTCCGTCATTT+TGG 0.191956 3_1:+94419702 None:intergenic
GTCTCCCAAACTTTCTTCTT+TGG 0.208381 3_1:+94407743 None:intergenic
TTGCTCGATATTGTCGTCTT+AGG 0.215733 3_1:-94419431 Msa0389540:CDS
AGTAAAGGCGTCGGGGTATT+TGG 0.251715 3_1:-94412247 Msa0389540:CDS
TTGAAGAAAACTAAAGTTTC+AGG 0.254594 3_1:-94409703 Msa0389540:intron
ATTTCTTGAGCTCCCTCTTT+TGG 0.255185 3_1:-94416947 Msa0389540:CDS
AGCCTTGTGATGGTAATTTC+TGG 0.259177 3_1:+94408858 None:intergenic
TGCTCGATATTGTCGTCTTA+GGG 0.267863 3_1:-94419430 Msa0389540:CDS
GTAAGTGCCGGTCATAAAAT+TGG 0.269958 3_1:-94409943 Msa0389540:CDS
GTATGTAAATTCTACAATTA+TGG 0.279911 3_1:+94407496 None:intergenic
TTCTCCAACAAGAGCAGAAC+TGG 0.292326 3_1:+94407814 None:intergenic
GTGGAGTTGTTTCAGTTTAT+GGG 0.293016 3_1:-94416581 Msa0389540:CDS
CAACAAAGTTGCTGCATATA+TGG 0.295135 3_1:-94411609 Msa0389540:CDS
TGAATCCAAAGAAGAAAGTT+TGG 0.297006 3_1:-94407748 Msa0389540:CDS
ATACTTGTCACAAATCTCTT+TGG 0.301274 3_1:+94419326 None:intergenic
CTTTCACTTTCTGATGATAA+AGG 0.302687 3_1:-94410000 Msa0389540:CDS
AGACTGAAAGATGGCATAAA+AGG 0.304480 3_1:+94410434 None:intergenic
GTATCTTCTTGCTTGTTTGT+TGG 0.305613 3_1:-94410459 Msa0389540:CDS
GGGAGGAAGGTGTGGTAGTG+GGG 0.309052 3_1:-94414729 Msa0389540:CDS
CATATATGCAGCAACTTTGT+TGG 0.315455 3_1:+94411610 None:intergenic
TCATACTCACACCCTGGAAT+TGG 0.326808 3_1:+94417989 None:intergenic
TTGATGCCCCTCATGGTTGC+TGG 0.337669 3_1:+94408558 None:intergenic
TTTGGATTCAAGAGTTCATC+TGG 0.338301 3_1:+94407761 None:intergenic
GAGGGTACCTGCCCAATTCC+AGG 0.340471 3_1:-94418001 Msa0389540:CDS
GAGGGAGGAAGGTGTGGTAG+TGG 0.342056 3_1:-94414731 Msa0389540:CDS
CTAATATTCCGGTTGAAGTA+TGG 0.343710 3_1:-94412207 Msa0389540:CDS
ATCTGCGGTACCGATGAGTA+TGG 0.345827 3_1:-94419390 Msa0389540:CDS
CCGCCCAGTTCTGCTCTTGT+TGG 0.347348 3_1:-94407818 Msa0389540:CDS
ATGAAGAAGTAGAAGTCTTC+AGG 0.354632 3_1:-94409801 Msa0389540:CDS
CAACGCACTCGGGTAAGATT+AGG 0.359678 3_1:+94419877 None:intergenic
GATATTACTTGCTAACAAAT+AGG 0.360848 3_1:-94412183 Msa0389540:CDS
TGTCTTATATCAAGGGTTAT+CGG 0.363141 3_1:-94406967 Msa0389540:three_prime_UTR
AAAATTGCAATGAGCATATC+TGG 0.367625 3_1:-94410688 Msa0389540:CDS
TGGCACACTTCAGTTTGCTC+AGG 0.367664 3_1:+94418290 None:intergenic
ACCCTTGATATAAGACAATT+CGG 0.368501 3_1:+94406973 None:intergenic
CTTTGTAGGAAACTGAGTTT+TGG 0.372999 3_1:-94410544 Msa0389540:intron
TCAATTCTGTCGGATTTAGA+AGG 0.374112 3_1:+94417930 None:intergenic
TGCAACTTATCTTCCAAAAG+AGG 0.374210 3_1:+94416934 None:intergenic
TACTTGTCACAAATCTCTTT+GGG 0.375574 3_1:+94419327 None:intergenic
CTAAAATATGCGATTAGAAT+GGG 0.377181 3_1:+94407445 None:intergenic
AATCTGATAGTCAGATTGTA+AGG 0.377771 3_1:+94407537 None:intergenic
ATCAGGAACAGTGGGAATAA+TGG 0.381536 3_1:+94411673 None:intergenic
TGAAACAACTCCACATTCTC+AGG 0.383989 3_1:+94416590 None:intergenic
ATTGGAAGGTGTTCTATGTT+TGG 0.384669 3_1:-94416685 Msa0389540:intron
GAACACCAAAGCCATTGTTC+AGG 0.386114 3_1:-94409921 Msa0389540:CDS
GCTAAACCAACCTGCAGGTT+TGG 0.387299 3_1:+94411948 None:intergenic
TGCAAAAGATACTAATATTC+CGG 0.387319 3_1:-94412218 Msa0389540:CDS
CTATTCAAACAACAAATTCA+TGG 0.387890 3_1:-94416864 Msa0389540:CDS
GGAGGAAGGTGTGGTAGTGG+GGG 0.389238 3_1:-94414728 Msa0389540:CDS
AGGGAGGAAGGTGTGGTAGT+GGG 0.396916 3_1:-94414730 Msa0389540:CDS
TTTGGTGAGTGATTGAATCT+AGG 0.397266 3_1:+94419720 None:intergenic
TCCCGAATTGTCTTATATCA+AGG 0.405314 3_1:-94406975 Msa0389540:three_prime_UTR
CCTCATCTCGGCAACATCAT+TGG 0.412465 3_1:-94419607 Msa0389540:CDS
GCGCCGAAGCTTCCCGTTGA+AGG 0.417667 3_1:-94419679 Msa0389540:CDS
AACGCACTCGGGTAAGATTA+GGG 0.421961 3_1:+94419878 None:intergenic
TGAGGGGAATGCATATTTGC+AGG 0.426344 3_1:-94410665 Msa0389540:intron
GAATCCAAAGAAGAAAGTTT+GGG 0.428068 3_1:-94407747 Msa0389540:CDS
ACAAATTCATGGTTCAAAAT+GGG 0.429611 3_1:-94416853 Msa0389540:CDS
GTGGGTGTGAGTATAGCTTT+TGG 0.430079 3_1:+94419839 None:intergenic
TCTAAAATATGCGATTAGAA+TGG 0.431533 3_1:+94407444 None:intergenic
TAATATCTCCATACTTCAAC+CGG 0.433672 3_1:+94412199 None:intergenic
CATACTCACACCCTGGAATT+GGG 0.434348 3_1:+94417990 None:intergenic
CGGCAGGCTACACACGTGAT+TGG 0.435417 3_1:-94416631 Msa0389540:CDS
TTTCCTTCAACGGGAAGCTT+CGG 0.440888 3_1:+94419676 None:intergenic
TTTCGAAGAGTAAAGGCGTC+GGG 0.442818 3_1:-94412255 Msa0389540:CDS
TACCGAGCTTCTGAATAACT+TGG 0.443002 3_1:-94412004 Msa0389540:CDS
CGAGGGTATGAATGAGGGTG+TGG 0.444133 3_1:+94419820 None:intergenic
CAAAAGCAATAGCGAGAGAG+AGG 0.444813 3_1:+94419776 None:intergenic
TGGAGAAAGAATCACATTCC+CGG 0.448358 3_1:-94407798 Msa0389540:CDS
TAACAAGGGAGCAGAGAGAT+TGG 0.452678 3_1:+94410504 None:intergenic
AGCTCCCTGAACAATGGCTT+TGG 0.453002 3_1:+94409916 None:intergenic
GGAGGAAATTCGATCGGAAA+GGG 0.458802 3_1:-94414707 Msa0389540:CDS
GTTGTTTCAGTTTATGGGAA+AGG 0.471613 3_1:-94416576 Msa0389540:CDS
TTGAAGGAAGTCAAGCTGAC+AGG 0.471653 3_1:-94409771 Msa0389540:CDS
AGCAGCAAGAACCATTGCTT+GGG 0.478236 3_1:+94408533 None:intergenic
AAAGCCATTGTTCAGGGAGC+TGG 0.479693 3_1:-94409914 Msa0389540:intron
TCCCAAGTTATTCAGAAGCT+CGG 0.482067 3_1:+94412002 None:intergenic
ACACACGTGATTGGGAGAAA+TGG 0.483792 3_1:-94416622 Msa0389540:CDS
CAAATGTTTAAAAGTTTCAA+AGG 0.483891 3_1:+94407018 None:intergenic
TGAGGAACGTTGTTGACATA+GGG 0.485004 3_1:+94419625 None:intergenic
GGCAGGCTACACACGTGATT+GGG 0.487493 3_1:-94416630 Msa0389540:CDS
CCGTATCGTCCCATTGCCTA+TGG 0.487513 3_1:+94407628 None:intergenic
CACGCAGCCGCAACGCACTC+GGG 0.488795 3_1:+94419867 None:intergenic
ATGAGGAACGTTGTTGACAT+AGG 0.488800 3_1:+94419624 None:intergenic
ACACGCAGCCGCAACGCACT+CGG 0.490032 3_1:+94419866 None:intergenic
GGCACACTTCAGTTTGCTCA+GGG 0.495259 3_1:+94418291 None:intergenic
ACATACAGTGAATCTGCATC+AGG 0.495378 3_1:+94408795 None:intergenic
AGATGTCTGTGGTGGGATCA+TGG 0.497749 3_1:-94416897 Msa0389540:CDS
AACACCAAAGCCATTGTTCA+GGG 0.498027 3_1:-94409920 Msa0389540:CDS
TTGGGAATCTTCAATTCTGT+CGG 0.499554 3_1:+94417920 None:intergenic
AAGCAGCAAGAACCATTGCT+TGG 0.500918 3_1:+94408532 None:intergenic
ATGAGGGAGGGAGGAAGGTG+TGG 0.501361 3_1:-94414737 Msa0389540:intron
ACGTTGCGCTTTCCTTCAAC+GGG 0.501448 3_1:+94419667 None:intergenic
ATCACATTCCCGGGGTATGA+AGG 0.502161 3_1:-94407788 Msa0389540:CDS
GGAGAAAGAATCACATTCCC+GGG 0.504503 3_1:-94407797 Msa0389540:CDS
TACCATGGTGTGATCAGCAT+TGG 0.507261 3_1:+94408509 None:intergenic
TATGCCATCTTTCAGTCTTG+AGG 0.507830 3_1:-94410429 Msa0389540:intron
GGAGCAATACATAGAGTCAA+TGG 0.511638 3_1:-94411588 Msa0389540:CDS
GAATGATGAGGGAGGGAGGA+AGG 0.512108 3_1:-94414742 Msa0389540:intron
TTGGGATTTGATGCCCCTCA+TGG 0.513052 3_1:+94408551 None:intergenic
GGAGTTTACTACCTTGCACT+TGG 0.515669 3_1:+94417901 None:intergenic
CCCTGGGATCTTGTAAGTGC+CGG 0.516485 3_1:-94409955 Msa0389540:CDS
GCAACTTATCTTCCAAAAGA+GGG 0.517389 3_1:+94416935 None:intergenic
GTCTTCAGGAAGAAGTTTGA+AGG 0.518322 3_1:-94409787 Msa0389540:CDS
CCCTTGATATAAGACAATTC+GGG 0.520856 3_1:+94406974 None:intergenic
CGGTTCCATCCATAGGCAAT+GGG 0.521640 3_1:-94407637 Msa0389540:CDS
ATTTGCACGGTTCCATCCAT+AGG 0.521790 3_1:-94407644 Msa0389540:CDS
CTTGTTATGAAAACTGCTGC+CGG 0.522580 3_1:-94410488 Msa0389540:CDS
TATACCACTTGATGAAATGC+AGG 0.523988 3_1:-94408712 Msa0389540:intron
GACGTTGCGCTTTCCTTCAA+CGG 0.527064 3_1:+94419666 None:intergenic
TCTGGATTGCCTTCATACCC+CGG 0.527809 3_1:+94407779 None:intergenic
TGTGCACCTTTAGGTTGAGT+TGG 0.528372 3_1:-94407846 Msa0389540:intron
CCCGAATTGTCTTATATCAA+GGG 0.528728 3_1:-94406974 Msa0389540:three_prime_UTR
GAGGAAATTCGATCGGAAAG+GGG 0.530081 3_1:-94414706 Msa0389540:CDS
TTGAATCTAGGTTCGGTCAC+CGG 0.534129 3_1:+94419732 None:intergenic
GTTTGGTTTGATGCTCCGAT+TGG 0.534698 3_1:-94416668 Msa0389540:CDS
CACATCAGCTGGCATTTGCA+CGG 0.536466 3_1:-94407657 Msa0389540:CDS
ACAAGGCTTGATATTCGAGT+TGG 0.537666 3_1:-94408843 Msa0389540:CDS
ATTCCACTGACCACATCAGC+TGG 0.538255 3_1:-94407668 Msa0389540:CDS
TTGTTATGAAAACTGCTGCC+GGG 0.539229 3_1:-94410487 Msa0389540:CDS
CTTAGCCGATCGACTTGTGG+AGG 0.539801 3_1:-94418020 Msa0389540:CDS
GTCAACAACGTTCCTCATCT+CGG 0.540137 3_1:-94419619 Msa0389540:CDS
TTCGATCGGAAAGGGGAAAG+AGG 0.541925 3_1:-94414699 Msa0389540:CDS
GAGTCGCCACTTACATCATC+AGG 0.542575 3_1:+94411656 None:intergenic
ACCGGCACTTACAAGATCCC+AGG 0.545961 3_1:+94409954 None:intergenic
GTTCTTAGCCGATCGACTTG+TGG 0.546717 3_1:-94418023 Msa0389540:CDS
TAGTCCTCGTATTTGTGATA+CGG 0.547604 3_1:-94416977 Msa0389540:CDS
ATCGTCCCATTGCCTATGGA+TGG 0.550835 3_1:+94407632 None:intergenic
CTCTGAGGACACATTACAGC+AGG 0.552010 3_1:-94418231 Msa0389540:intron
TGAAGGAAGTCAAGCTGACA+GGG 0.554340 3_1:-94409770 Msa0389540:CDS
GTGATTGATATATATCCAAT+CGG 0.554368 3_1:+94416653 None:intergenic
CGGTCACCGGCGAGATGAAG+AGG 0.555049 3_1:+94419745 None:intergenic
TCGAATATCAAGCCTTGTGA+TGG 0.555943 3_1:+94408848 None:intergenic
TGAGTGATTGAATCTAGGTT+CGG 0.557092 3_1:+94419725 None:intergenic
TCACCAAAATGACGGAAGAT+CGG 0.557613 3_1:-94419705 Msa0389540:exon
TCGAGTTGGTCTCATAAAGA+AGG 0.557778 3_1:-94408829 Msa0389540:CDS
TGCAACGGAGACTAAAGCAT+TGG 0.558923 3_1:-94419364 Msa0389540:CDS
TTTACTGCGATACATGCAAA+AGG 0.559169 3_1:-94418045 Msa0389540:CDS
GTTCTCACACTGATCCCCTC+TGG 0.559234 3_1:+94417961 None:intergenic
CCAATGATGTTGCCGAGATG+AGG 0.561565 3_1:+94419607 None:intergenic
CCATAGGCAATGGGACGATA+CGG 0.562052 3_1:-94407628 Msa0389540:CDS
ACCGAGCTTCTGAATAACTT+GGG 0.563182 3_1:-94412003 Msa0389540:CDS
CTGGATTGCCTTCATACCCC+GGG 0.563744 3_1:+94407780 None:intergenic
ACGGTTCCATCCATAGGCAA+TGG 0.563965 3_1:-94407638 Msa0389540:CDS
CTCACACCCTGGAATTGGGC+AGG 0.569388 3_1:+94417994 None:intergenic
AGGGTACCTGCCCAATTCCA+GGG 0.570926 3_1:-94418000 Msa0389540:CDS
GCGGAGCCTCTTCATCTCGC+CGG 0.571511 3_1:-94419751 Msa0389540:five_prime_UTR
CGTGCAAATGCCAGCTGATG+TGG 0.574978 3_1:+94407658 None:intergenic
TGACAGGGTTGTTCGTGCAG+AGG 0.576831 3_1:-94409755 Msa0389540:CDS
GAAACAACTCCACATTCTCA+GGG 0.577888 3_1:+94416591 None:intergenic
AAAAGAGAGAATGTGAGCGA+GGG 0.583265 3_1:+94419803 None:intergenic
GGATATATATCAATCACGGC+AGG 0.586570 3_1:-94416647 Msa0389540:CDS
ATACATAGAGTCAATGGAGA+AGG 0.586721 3_1:-94411582 Msa0389540:intron
TGCAATGAGCATATCTGGTG+AGG 0.586994 3_1:-94410683 Msa0389540:CDS
GCAATGAGCATATCTGGTGA+GGG 0.587736 3_1:-94410682 Msa0389540:CDS
GCAGCAAAAGCATCATCAAG+TGG 0.587775 3_1:-94408906 Msa0389540:CDS
TGTGAGCGAGGGTATGAATG+AGG 0.588092 3_1:+94419814 None:intergenic
CAAACCTGCATTTCATCAAG+TGG 0.588160 3_1:+94408708 None:intergenic
CGTTGCAGTCCCATACTCAT+CGG 0.590342 3_1:+94419380 None:intergenic
GCATTACCAGAGATCTGAAG+TGG 0.591467 3_1:-94416816 Msa0389540:CDS
GAGGGTATGAATGAGGGTGT+GGG 0.592442 3_1:+94419821 None:intergenic
CACGTGATTGGGAGAAATGG+TGG 0.593366 3_1:-94416619 Msa0389540:CDS
GTGAGTATGATTCTGCCAGA+GGG 0.593875 3_1:-94417976 Msa0389540:CDS
TATGTGGATGCAGATTGGAT+CGG 0.594562 3_1:+94420005 None:intergenic
ATTACCTCAAGACTGAAAGA+TGG 0.597613 3_1:+94410425 None:intergenic
AGGGGAGAGCGCTAGTGATG+AGG 0.598406 3_1:+94419644 None:intergenic
TGGCAATAAAACTCAAAACT+CGG 0.598920 3_1:+94411968 None:intergenic
GGTACCCTCCACAAGTCGAT+CGG 0.599711 3_1:+94418015 None:intergenic
GCTCGATATTGTCGTCTTAG+GGG 0.599763 3_1:-94419429 Msa0389540:CDS
TTCACAAGGAGGTCTACGAT+TGG 0.599884 3_1:-94418352 Msa0389540:CDS
TCTCCAACAAGAGCAGAACT+GGG 0.601244 3_1:+94407815 None:intergenic
AGCAAGAAGATACACAATCC+CGG 0.602614 3_1:+94410469 None:intergenic
GAGGGAGCTCAAGAAATAAG+TGG 0.603079 3_1:+94416953 None:intergenic
GTAAAGGTTAAACTAAAGCA+AGG 0.605462 3_1:-94410715 Msa0389540:CDS
ACTGTTCCTGATGATGTAAG+TGG 0.610282 3_1:-94411662 Msa0389540:CDS
CGAAAATAATTGGCTCTCTG+AGG 0.610435 3_1:-94418246 Msa0389540:CDS
TCTGCGGTACCGATGAGTAT+GGG 0.610606 3_1:-94419389 Msa0389540:CDS
TCAATCACTCACCAAAATGA+CGG 0.611846 3_1:-94419713 Msa0389540:exon
GATTGGATATATATCAATCA+CGG 0.614894 3_1:-94416651 Msa0389540:CDS
AAAAGCAATAGCGAGAGAGA+GGG 0.615266 3_1:+94419777 None:intergenic
ATTGAAGATTCCCAAGTGCA+AGG 0.615621 3_1:-94417912 Msa0389540:intron
TAAAATATGCGATTAGAATG+GGG 0.621319 3_1:+94407446 None:intergenic
CAAGCAACTAAATTTGTCTG+TGG 0.621913 3_1:-94410031 Msa0389540:intron
GTGAGCGAGGGTATGAATGA+GGG 0.622340 3_1:+94419815 None:intergenic
TAATGACTTACAGTATGGAA+TGG 0.623528 3_1:+94416545 None:intergenic
ACCTAAAACCAGCAACCATG+AGG 0.626255 3_1:-94408566 Msa0389540:CDS
CTTACATCATCAGGAACAGT+GGG 0.627035 3_1:+94411665 None:intergenic
GAGTTTACTACCTTGCACTT+GGG 0.627712 3_1:+94417902 None:intergenic
GGGCATCAAATCCCAAGCAA+TGG 0.628535 3_1:-94408544 Msa0389540:CDS
CCTAAAACCAGCAACCATGA+GGG 0.630105 3_1:-94408565 Msa0389540:CDS
GGGAGGAAATTCGATCGGAA+AGG 0.632757 3_1:-94414708 Msa0389540:CDS
CATACCAGCTCCCTGAACAA+TGG 0.632892 3_1:+94409910 None:intergenic
ATCTGATAGTCAGATTGTAA+GGG 0.633871 3_1:+94407538 None:intergenic
GGAAAGGGGAAAGAGGCTGT+TGG 0.633882 3_1:-94414692 Msa0389540:intron
TTAGCCGATCGACTTGTGGA+GGG 0.636760 3_1:-94418019 Msa0389540:CDS
CATCAATGAGATGTCTGTGG+TGG 0.637086 3_1:-94416905 Msa0389540:CDS
CAGACAAGAACCGTTGTCAG+TGG 0.638105 3_1:-94408747 Msa0389540:CDS
TACAATGCGATTTACATCTG+CGG 0.638497 3_1:-94419405 Msa0389540:CDS
TTACCAGAGATCTGAAGTGG+GGG 0.638758 3_1:-94416813 Msa0389540:CDS
CATTACCAGAGATCTGAAGT+GGG 0.638794 3_1:-94416815 Msa0389540:CDS
TAGATACCATGCTATTCACA+AGG 0.643601 3_1:-94418366 Msa0389540:CDS
AGACCTCCTTGTGAATAGCA+TGG 0.644341 3_1:+94418360 None:intergenic
ACGATCAGGTGTGTTGAGTG+CGG 0.645416 3_1:-94419460 Msa0389540:intron
CTTGACAAGTCCACTGACAA+CGG 0.645824 3_1:+94408737 None:intergenic
ATGCCAGCTGATGTGGTCAG+TGG 0.646227 3_1:+94407665 None:intergenic
AATCTTACCCGAGTGCGTTG+CGG 0.649416 3_1:-94419874 Msa0389540:five_prime_UTR
GCAGAATCATACTCACACCC+TGG 0.653453 3_1:+94417983 None:intergenic
CCGGCACTTACAAGATCCCA+GGG 0.653556 3_1:+94409955 None:intergenic
TGTGAGTATGATTCTGCCAG+AGG 0.653951 3_1:-94417977 Msa0389540:CDS
CTAAAACCAGCAACCATGAG+GGG 0.655884 3_1:-94408564 Msa0389540:CDS
ATCAATGAGATGTCTGTGGT+GGG 0.655945 3_1:-94416904 Msa0389540:CDS
CGATGAGTATGGGACTGCAA+CGG 0.660790 3_1:-94419379 Msa0389540:CDS
CAATGAGCATATCTGGTGAG+GGG 0.667194 3_1:-94410681 Msa0389540:CDS
GAGGAACGTTGTTGACATAG+GGG 0.668721 3_1:+94419626 None:intergenic
AACCAGAAATTACCATCACA+AGG 0.669041 3_1:-94408860 Msa0389540:CDS
CTTGCTAACAAATAGGCCTG+AGG 0.671819 3_1:-94412176 Msa0389540:intron
ACTTACATCATCAGGAACAG+TGG 0.673842 3_1:+94411664 None:intergenic
TTCGAAGAGTAAAGGCGTCG+GGG 0.678180 3_1:-94412254 Msa0389540:CDS
ATTACCAGAGATCTGAAGTG+GGG 0.685797 3_1:-94416814 Msa0389540:CDS
GGGGATCAGTGTGAGAACTG+TGG 0.689601 3_1:-94417956 Msa0389540:CDS
TATGTTGAAGAGATTGATGT+CGG 0.692037 3_1:-94408777 Msa0389540:CDS
TACCAGAGATCTGAAGTGGG+GGG 0.699203 3_1:-94416812 Msa0389540:CDS
GCACACTTCAGTTTGCTCAG+GGG 0.701199 3_1:+94418292 None:intergenic
TTCCAATGCTGATCACACCA+TGG 0.701218 3_1:-94408511 Msa0389540:intron
TGAGTATGATTCTGCCAGAG+GGG 0.701606 3_1:-94417975 Msa0389540:CDS
GCACACGAATGAGAAGCTAG+AGG 0.715856 3_1:-94407705 Msa0389540:CDS
GAGAAAGAATCACATTCCCG+GGG 0.722304 3_1:-94407796 Msa0389540:CDS
ATACATCAATGAGATGTCTG+TGG 0.725592 3_1:-94416908 Msa0389540:CDS
ATACCATGCTATTCACAAGG+AGG 0.735757 3_1:-94418363 Msa0389540:CDS
CCAACAAGAGCAGAACTGGG+CGG 0.760494 3_1:+94407818 None:intergenic
TGGTCCGTATCACAAATACG+AGG 0.816438 3_1:+94416973 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATATTAAAATAATTAT+TGG + chr3_1:94409725-94409744 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTCCTTA+AGG + chr3_1:94407027-94407046 None:intergenic 10.0%
!!! TTTTTGGAATTTAAAAAAAT+TGG - chr3_1:94409399-94409418 Msa0389540:intron 10.0%
!!! TGCATTTTTTATTATTTTAA+AGG - chr3_1:94409662-94409681 Msa0389540:intron 10.0%
!!! TAAAGAATATAGTTTTAAAT+TGG + chr3_1:94410283-94410302 None:intergenic 10.0%
!! TAAAACTATATTCTTTAAAT+TGG - chr3_1:94410286-94410305 Msa0389540:intron 10.0%
!! TGAATTATGATATAAATAAA+TGG + chr3_1:94410887-94410906 None:intergenic 10.0%
!! TTTATAGTAATCAAAATATT+TGG + chr3_1:94413485-94413504 None:intergenic 10.0%
!!! ACAATTGATTTATAAATAAT+AGG - chr3_1:94413602-94413621 Msa0389540:intron 10.0%
!!! TTTTTGTTATAAAAGAAAAA+AGG + chr3_1:94414462-94414481 None:intergenic 10.0%
!! AAATTAAAATTTAATCAAGA+TGG + chr3_1:94419599-94419618 None:intergenic 10.0%
!!! TTAAATTTTAATTTGAACTT+CGG - chr3_1:94419605-94419624 Msa0389540:CDS 10.0%
!!! GTTTATTTTGTTATGTTTAT+CGG - chr3_1:94407731-94407750 Msa0389540:CDS 15.0%
!!! AGTGCATTTAAATATTTTAT+CGG - chr3_1:94408811-94408830 Msa0389540:CDS 15.0%
!!! ACTCAAATTTTCAATTAAAT+TGG + chr3_1:94408858-94408877 None:intergenic 15.0%
!!! AAAAAGTTCTGATATATTTT+TGG - chr3_1:94409336-94409355 Msa0389540:intron 15.0%
!!! AAAAGTTCTGATATATTTTT+GGG - chr3_1:94409337-94409356 Msa0389540:intron 15.0%
!! AAAATATAAATAAATTAGGC+AGG + chr3_1:94410817-94410836 None:intergenic 15.0%
!!! ATTGTTGATTTTCAATTTTT+TGG - chr3_1:94411429-94411448 Msa0389540:intron 15.0%
!!! ATTTTAATAGTCAATACTAT+TGG + chr3_1:94411674-94411693 None:intergenic 15.0%
!!! ATTTTGTTTTTATTTTCATG+TGG - chr3_1:94412202-94412221 Msa0389540:CDS 15.0%
!! CATAATAAAAACTCATTTAT+TGG + chr3_1:94412660-94412679 None:intergenic 15.0%
!! TAAAGTTAATAGTGAAATAT+CGG + chr3_1:94414433-94414452 None:intergenic 15.0%
!! ACTAATTTCTATAGAAATAT+TGG - chr3_1:94414561-94414580 Msa0389540:intron 15.0%
!! AAAGAAACTTTAATAAATAC+AGG + chr3_1:94415231-94415250 None:intergenic 15.0%
!!! AATCTTTGAAAATTACTAAA+GGG - chr3_1:94417106-94417125 Msa0389540:intron 15.0%
!! TTGAAAAAACTAAAATTACT+TGG - chr3_1:94419822-94419841 Msa0389540:five_prime_UTR 15.0%
!!! TTTTATAAGCTTCAAATAAG+AGG - chr3_1:94408204-94408223 Msa0389540:intron 20.0%
!!! AATATAAGCTTTGATGAATT+TGG - chr3_1:94408663-94408682 Msa0389540:intron 20.0%
!!! AAAAAGTACACGAAAATAAT+TGG - chr3_1:94408733-94408752 Msa0389540:CDS 20.0%
!!! AATATTTTATCGGTTATTGT+TGG - chr3_1:94408821-94408840 Msa0389540:CDS 20.0%
!! AGTAATAAAGCAAGAATTTA+GGG + chr3_1:94409118-94409137 None:intergenic 20.0%
!! AAGTAATAAAGCAAGAATTT+AGG + chr3_1:94409119-94409138 None:intergenic 20.0%
!!! AAAGTTCTGATATATTTTTG+GGG - chr3_1:94409338-94409357 Msa0389540:intron 20.0%
!! ACTATATTCTTTAAATTGGA+AGG - chr3_1:94410290-94410309 Msa0389540:intron 20.0%
!!! TTTATGTTGCTATTGTATTT+TGG - chr3_1:94410667-94410686 Msa0389540:CDS 20.0%
!! TGTAGAAAAAGTAAGAAAAT+GGG + chr3_1:94410713-94410732 None:intergenic 20.0%
!! ATGTAGAAAAAGTAAGAAAA+TGG + chr3_1:94410714-94410733 None:intergenic 20.0%
!! ATTGAAAAATACAGTACAAT+AGG + chr3_1:94411146-94411165 None:intergenic 20.0%
!!! ATCTTTAATCTTTGAGATAA+CGG - chr3_1:94411314-94411333 Msa0389540:intron 20.0%
!!! AATAGAATTTTGTTTTTCGT+GGG + chr3_1:94411576-94411595 None:intergenic 20.0%
!!! TAATAGAATTTTGTTTTTCG+TGG + chr3_1:94411577-94411596 None:intergenic 20.0%
!! TAAAAAGTCCTGTAAAAAAA+AGG - chr3_1:94411819-94411838 Msa0389540:intron 20.0%
!!! TTTTAATGCCTTTTTTTTAC+AGG + chr3_1:94411830-94411849 None:intergenic 20.0%
!!! TAGCATTTTTACTTTTAAGT+TGG + chr3_1:94412028-94412047 None:intergenic 20.0%
!! AAGTAATTAGATTCTGTATT+AGG + chr3_1:94412163-94412182 None:intergenic 20.0%
!!! TTTTTATTATGAAACCGAAA+AGG - chr3_1:94412669-94412688 Msa0389540:intron 20.0%
!!! TAAGAAACTTTTCACTTTTT+TGG + chr3_1:94412965-94412984 None:intergenic 20.0%
!!! TATCATTCTAAAATTTCAGT+TGG + chr3_1:94413386-94413405 None:intergenic 20.0%
!!! TGTTTCATCTTTTAGAATTT+CGG - chr3_1:94413553-94413572 Msa0389540:intron 20.0%
!!! CAACACAAAATAAACTTTTA+AGG - chr3_1:94413651-94413670 Msa0389540:intron 20.0%
!!! ATAAAAGGGTGTTTATATAT+AGG - chr3_1:94414268-94414287 Msa0389540:intron 20.0%
!!! TAAAAGGGTGTTTATATATA+GGG - chr3_1:94414269-94414288 Msa0389540:intron 20.0%
!! AAAGTTAATAGTGAAATATC+GGG + chr3_1:94414432-94414451 None:intergenic 20.0%
!!! TATTTCTATAGAAATTAGTG+CGG + chr3_1:94414560-94414579 None:intergenic 20.0%
!! CTATAGAAATATTGGAAAAT+AGG - chr3_1:94414569-94414588 Msa0389540:intron 20.0%
!! ATTACCATTTATTGAATGTT+GGG + chr3_1:94414664-94414683 None:intergenic 20.0%
!!! ATGTTACTTAAATGATTTCT+AGG - chr3_1:94414706-94414725 Msa0389540:CDS 20.0%
!!! TGTTACTTAAATGATTTCTA+GGG - chr3_1:94414707-94414726 Msa0389540:CDS 20.0%
!!! AACAGATTTCAATTTTAAGA+AGG + chr3_1:94415496-94415515 None:intergenic 20.0%
!! AAAACAGAAAGAAAAATATC+TGG - chr3_1:94415550-94415569 Msa0389540:intron 20.0%
!! TGGTTTGAAAACAATTTAAA+TGG - chr3_1:94415664-94415683 Msa0389540:intron 20.0%
!! ATCAATAGTATAAAAATTCG+GGG + chr3_1:94416389-94416408 None:intergenic 20.0%
!! CATCAATAGTATAAAAATTC+GGG + chr3_1:94416390-94416409 None:intergenic 20.0%
!! GCATCAATAGTATAAAAATT+CGG + chr3_1:94416391-94416410 None:intergenic 20.0%
!! TTCTGTTAAGATATAGAAAA+TGG - chr3_1:94416639-94416658 Msa0389540:CDS 20.0%
!! TTGAGAAAATAAGAAAGAAT+AGG + chr3_1:94416849-94416868 None:intergenic 20.0%
!!! CAATCTTTGAAAATTACTAA+AGG - chr3_1:94417105-94417124 Msa0389540:intron 20.0%
!! ACATAAACTCAAATTAGAAA+TGG + chr3_1:94417324-94417343 None:intergenic 20.0%
!! GTTAATATAGTAACCAATAT+AGG - chr3_1:94417658-94417677 Msa0389540:intron 20.0%
!! ATCTTTACAATCATAACATT+CGG + chr3_1:94418600-94418619 None:intergenic 20.0%
!! AGTGAAGTTACAAAAATAAA+TGG + chr3_1:94418875-94418894 None:intergenic 20.0%
!!! GATATTATCAACACTATTTT+TGG + chr3_1:94418901-94418920 None:intergenic 20.0%
!! GTATGTAAATTCTACAATTA+TGG + chr3_1:94419496-94419515 None:intergenic 20.0%
!!! ATTAGCTTTTTCAACTTAAA+TGG + chr3_1:94419715-94419734 None:intergenic 20.0%
!!! AATGATTACAGGAATATTTT+AGG + chr3_1:94419798-94419817 None:intergenic 20.0%
!! CAAATGTTTAAAAGTTTCAA+AGG + chr3_1:94419974-94419993 None:intergenic 20.0%
!!! CTTTGAAACTTTTAAACATT+TGG - chr3_1:94419972-94419991 Msa0389540:intron 20.0%
!!! GTGTTTGTTTCTATTTTATG+TGG + chr3_1:94407003-94407022 None:intergenic 25.0%
! AAGACAATTGTTAACTTAGA+CGG + chr3_1:94408278-94408297 None:intergenic 25.0%
!! AACTATAGATGATGCATTTT+TGG + chr3_1:94408350-94408369 None:intergenic 25.0%
! AATGGAAACATCTCATATTA+GGG + chr3_1:94408499-94408518 None:intergenic 25.0%
! AAATGGAAACATCTCATATT+AGG + chr3_1:94408500-94408519 None:intergenic 25.0%
!!! GTACTTTTTTGAAAATTGCT+TGG + chr3_1:94408722-94408741 None:intergenic 25.0%
!!! CAGAACTTTTTAAAAATGAG+TGG + chr3_1:94409327-94409346 None:intergenic 25.0%
! TGAAATTCAAAGCAACTAAT+AGG + chr3_1:94409511-94409530 None:intergenic 25.0%
! AACTCAAAGAACAATGAAAA+GGG + chr3_1:94409565-94409584 None:intergenic 25.0%
! AAACTCAAAGAACAATGAAA+AGG + chr3_1:94409566-94409585 None:intergenic 25.0%
! TTTCAACAAAGGTAATATGT+GGG + chr3_1:94409603-94409622 None:intergenic 25.0%
! ATTTCAACAAAGGTAATATG+TGG + chr3_1:94409604-94409623 None:intergenic 25.0%
! GCAACAAAATATTTCAACAA+AGG + chr3_1:94409614-94409633 None:intergenic 25.0%
! AGTACAATTCTATAGTTGTT+TGG - chr3_1:94409932-94409951 Msa0389540:CDS 25.0%
! CTATTCAAACAACAAATTCA+TGG - chr3_1:94410125-94410144 Msa0389540:intron 25.0%
! AACAAATTCATGGTTCAAAA+TGG - chr3_1:94410135-94410154 Msa0389540:intron 25.0%
! ACAAATTCATGGTTCAAAAT+GGG - chr3_1:94410136-94410155 Msa0389540:intron 25.0%
! GTGATTGATATATATCCAAT+CGG + chr3_1:94410339-94410358 None:intergenic 25.0%
! GATTGGATATATATCAATCA+CGG - chr3_1:94410338-94410357 Msa0389540:intron 25.0%
! TAAGATAATGACTTACAGTA+TGG + chr3_1:94410452-94410471 None:intergenic 25.0%
! GTAGAAAAAGTAAGAAAATG+GGG + chr3_1:94410712-94410731 None:intergenic 25.0%
! TATCATTTCACTGACATATT+TGG - chr3_1:94410837-94410856 Msa0389540:intron 25.0%
! ATTGAAAAATCGTAAATCGT+AGG - chr3_1:94411528-94411547 Msa0389540:intron 25.0%
! AAAAATAGAGAAATGCTGTT+TGG - chr3_1:94411847-94411866 Msa0389540:intron 25.0%
! TTAGGAAAAATTGGATGTTT+GGG + chr3_1:94412145-94412164 None:intergenic 25.0%
! ATTAGGAAAAATTGGATGTT+TGG + chr3_1:94412146-94412165 None:intergenic 25.0%
! GATTCTGTATTAGGAAAAAT+TGG + chr3_1:94412154-94412173 None:intergenic 25.0%
! TTTAACATTGTTGAATGATG+AGG - chr3_1:94412235-94412254 Msa0389540:CDS 25.0%
! TTAACATTGTTGAATGATGA+GGG - chr3_1:94412236-94412255 Msa0389540:CDS 25.0%
!!! GCTCTGTTTTATTTTTTTCT+TGG - chr3_1:94412412-94412431 Msa0389540:intron 25.0%
!!! TTTTTTCTTGGAGTTTTTAG+CGG - chr3_1:94412424-94412443 Msa0389540:intron 25.0%
!!! TTGTGCGAGTTTTTTTTTAT+TGG - chr3_1:94412459-94412478 Msa0389540:intron 25.0%
!! ACTTTAGTAACGAATTTTCA+CGG + chr3_1:94412517-94412536 None:intergenic 25.0%
!!! TTTTTTAGAGGATTGCTATT+TGG + chr3_1:94412546-94412565 None:intergenic 25.0%
!! AAGTTTCTTACATTTTAGAC+CGG + chr3_1:94412955-94412974 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG - chr3_1:94412990-94413009 Msa0389540:intron 25.0%
! CATTCAATAAATGATGTATG+TGG + chr3_1:94412990-94413009 None:intergenic 25.0%
!!! TTCTCTTTTTTGTATGCAAT+TGG - chr3_1:94413110-94413129 Msa0389540:intron 25.0%
!!! TCTCTTTTTTGTATGCAATT+GGG - chr3_1:94413111-94413130 Msa0389540:intron 25.0%
! AATGAAATAAAATGCAACAG+TGG + chr3_1:94413183-94413202 None:intergenic 25.0%
!! TAATGTTTAGAGTCCAATAT+TGG - chr3_1:94413282-94413301 Msa0389540:intron 25.0%
! CCTTAATACTAGTTATATGT+GGG - chr3_1:94413317-94413336 Msa0389540:intron 25.0%
! TGAAAATGTGATATAAGTGA+GGG + chr3_1:94413687-94413706 None:intergenic 25.0%
! TTAGATATAATTATTTCCCC+TGG - chr3_1:94413837-94413856 Msa0389540:intron 25.0%
!! CTTTTCGATTCTTAATAAAG+TGG - chr3_1:94414065-94414084 Msa0389540:intron 25.0%
! CTTAATAAAGTGGAAAATGA+TGG - chr3_1:94414075-94414094 Msa0389540:intron 25.0%
!! AATGATGGAATTTATTCTTC+AGG - chr3_1:94414090-94414109 Msa0389540:intron 25.0%
!! TATAAACACCCTTTTATTAG+AGG + chr3_1:94414265-94414284 None:intergenic 25.0%
! AAGTTAATAGTGAAATATCG+GGG + chr3_1:94414431-94414450 None:intergenic 25.0%
! TGAAAAAAGTGAAAACAAGA+TGG + chr3_1:94414488-94414507 None:intergenic 25.0%
!! CATTTTCTATTACAAAACAG+CGG + chr3_1:94414612-94414631 None:intergenic 25.0%
! CATTACCATTTATTGAATGT+TGG + chr3_1:94414665-94414684 None:intergenic 25.0%
! TGCAAAAGATACTAATATTC+CGG - chr3_1:94414771-94414790 Msa0389540:intron 25.0%
!! GATATTACTTGCTAACAAAT+AGG - chr3_1:94414806-94414825 Msa0389540:intron 25.0%
!!! TATCAGATACACTTTTTACA+TGG - chr3_1:94414939-94414958 Msa0389540:intron 25.0%
! ATACAGGTAATAATGAAGAA+AGG + chr3_1:94415215-94415234 None:intergenic 25.0%
! ATACTAACTTTGTCTTGTAA+AGG - chr3_1:94415279-94415298 Msa0389540:intron 25.0%
!!! AAATTTTTTGGTTGGATCAT+GGG + chr3_1:94415358-94415377 None:intergenic 25.0%
!!! AACTTTGTTGGCAAATTTTT+TGG + chr3_1:94415370-94415389 None:intergenic 25.0%
!!! ATCCCTATTTTGAAATAACA+TGG - chr3_1:94415436-94415455 Msa0389540:intron 25.0%
!!! TGCCATGTTATTTCAAAATA+GGG + chr3_1:94415441-94415460 None:intergenic 25.0%
!! AGAAAAATATCTGGTAATGT+TGG - chr3_1:94415559-94415578 Msa0389540:intron 25.0%
! TAGAACATTATGCTCTAATT+TGG - chr3_1:94415594-94415613 Msa0389540:intron 25.0%
! GAGATAAAAAAAAAAGCTTG+TGG - chr3_1:94415688-94415707 Msa0389540:intron 25.0%
!!! TGAGATAATGTTTTAGAAAG+TGG - chr3_1:94415720-94415739 Msa0389540:intron 25.0%
! AGAAAAAAACTAACAACACT+AGG - chr3_1:94416070-94416089 Msa0389540:intron 25.0%
!! TTCTTTTTGCAAAACTGTAA+AGG - chr3_1:94416258-94416277 Msa0389540:intron 25.0%
! TCAATAGTATAAAAATTCGG+GGG + chr3_1:94416388-94416407 None:intergenic 25.0%
! AACAGGAATACAAATATGTA+TGG + chr3_1:94416597-94416616 None:intergenic 25.0%
!! TATTTGTATTCCTGTTTTGT+TGG - chr3_1:94416601-94416620 Msa0389540:CDS 25.0%
! AATCAAAATACCAACAAAAC+AGG + chr3_1:94416614-94416633 None:intergenic 25.0%
! TGTTAAGATATAGAAAATGG+AGG - chr3_1:94416642-94416661 Msa0389540:CDS 25.0%
!!! TTTCTTTTGACTTCAATTCT+TGG - chr3_1:94416880-94416899 Msa0389540:CDS 25.0%
!!! TTCTTTTGACTTCAATTCTT+GGG - chr3_1:94416881-94416900 Msa0389540:CDS 25.0%
! TCAAAGTCTTGGAATATAAT+AGG + chr3_1:94416909-94416928 None:intergenic 25.0%
! TTGAAGAAAACTAAAGTTTC+AGG - chr3_1:94417286-94417305 Msa0389540:intron 25.0%
! ATGAATATCTTGACGAAAAA+AGG - chr3_1:94417401-94417420 Msa0389540:intron 25.0%
! TGAATATCTTGACGAAAAAA+GGG - chr3_1:94417402-94417421 Msa0389540:intron 25.0%
! AATAAGCTAAATGACACAAA+CGG - chr3_1:94417533-94417552 Msa0389540:intron 25.0%
!!! ATTTTGATATCTCAGAACTT+CGG + chr3_1:94417747-94417766 None:intergenic 25.0%
!! TTTCAAGTAAAGTGCAATTT+AGG + chr3_1:94417815-94417834 None:intergenic 25.0%
!! AAGGTTGCTTATATTGATTA+GGG - chr3_1:94418021-94418040 Msa0389540:CDS 25.0%
!!! TTACTTTTTTCAGAATCGAA+AGG - chr3_1:94418385-94418404 Msa0389540:intron 25.0%
!! TAGCATTTTAAATTACACCA+TGG - chr3_1:94418556-94418575 Msa0389540:intron 25.0%
!! GGTAGTTGTTTAAGATTTAA+AGG - chr3_1:94418636-94418655 Msa0389540:intron 25.0%
! GCATGTTTATTGCAATATAT+TGG - chr3_1:94418975-94418994 Msa0389540:intron 25.0%
! ATCAAATATAATATAGCAGC+AGG + chr3_1:94419042-94419061 None:intergenic 25.0%
!! GATTTTGTTAAGTTATCCTT+TGG - chr3_1:94419059-94419078 Msa0389540:intron 25.0%
! TAAAATATGCGATTAGAATG+GGG + chr3_1:94419546-94419565 None:intergenic 25.0%
! CTAAAATATGCGATTAGAAT+GGG + chr3_1:94419547-94419566 None:intergenic 25.0%
!! TCTAAAATATGCGATTAGAA+TGG + chr3_1:94419548-94419567 None:intergenic 25.0%
! CTGTCAATACTCAATAATAT+AGG + chr3_1:94419650-94419669 None:intergenic 25.0%
!!! TTTAGGATTTTTAGAAGTTC+TGG + chr3_1:94419781-94419800 None:intergenic 25.0%
!! TTTTCAACTTGAATGATTAC+AGG + chr3_1:94419809-94419828 None:intergenic 25.0%
! TAAAATATCCAACCTATGAA+AGG - chr3_1:94419848-94419867 Msa0389540:five_prime_UTR 25.0%
!!! CCAAAAGTTTCTTTTTTCAA+AGG + chr3_1:94419902-94419921 None:intergenic 25.0%
!!! CCTTTGAAAAAAGAAACTTT+TGG - chr3_1:94419899-94419918 Msa0389540:five_prime_UTR 25.0%
!!! TCTGAAAGTTTTTAGATGTT+CGG - chr3_1:94419942-94419961 Msa0389540:intron 25.0%
! TATTTTATGTGGATGCAGAT+TGG + chr3_1:94406992-94407011 None:intergenic 30.0%
ATAGAAACAAACACTCCTTA+AGG - chr3_1:94407009-94407028 Msa0389540:three_prime_UTR 30.0%
!!! ATTGGTTTGATTTTACGATC+AGG - chr3_1:94407515-94407534 Msa0389540:three_prime_UTR 30.0%
TACTTGTCACAAATCTCTTT+GGG + chr3_1:94407665-94407684 None:intergenic 30.0%
ATACTTGTCACAAATCTCTT+TGG + chr3_1:94407666-94407685 None:intergenic 30.0%
! CTTCTGACTGGTTAAAATTA+GGG + chr3_1:94407796-94407815 None:intergenic 30.0%
AAATATAGGCTTGCAACAAT+TGG + chr3_1:94407822-94407841 None:intergenic 30.0%
!!! TAATTGTTTTAGAGCCTGTT+TGG - chr3_1:94407934-94407953 Msa0389540:intron 30.0%
TCAAATAAGTCATTCCAAAC+AGG + chr3_1:94407951-94407970 None:intergenic 30.0%
TGAGTTTATTTACTGACATG+AGG - chr3_1:94407968-94407987 Msa0389540:intron 30.0%
CCTTATTGACAAGTAAAAGT+AGG + chr3_1:94408245-94408264 None:intergenic 30.0%
!! CCTACTTTTACTTGTCAATA+AGG - chr3_1:94408242-94408261 Msa0389540:intron 30.0%
ATGGAAACATCTCATATTAG+GGG + chr3_1:94408498-94408517 None:intergenic 30.0%
AAACACTGAACTACAAGAAA+TGG + chr3_1:94408517-94408536 None:intergenic 30.0%
AACAGGTGTAATAATATCCT+TGG + chr3_1:94408545-94408564 None:intergenic 30.0%
AGGATATTATTACACCTGTT+TGG - chr3_1:94408545-94408564 Msa0389540:CDS 30.0%
CATCAAACAAATTCTTCTCA+AGG + chr3_1:94408583-94408602 None:intergenic 30.0%
TAAAGCAAGAATTTAGGGAA+GGG + chr3_1:94409113-94409132 None:intergenic 30.0%
ATAAAGCAAGAATTTAGGGA+AGG + chr3_1:94409114-94409133 None:intergenic 30.0%
ATCCAAAACAATCACACATA+TGG + chr3_1:94409182-94409201 None:intergenic 30.0%
!!! TGATTGTTTTGGATGAACTT+AGG - chr3_1:94409188-94409207 Msa0389540:intron 30.0%
TAAAAATGAGTGGATGAGTT+TGG + chr3_1:94409317-94409336 None:intergenic 30.0%
!!! TTCTGATATATTTTTGGGGT+AGG - chr3_1:94409342-94409361 Msa0389540:intron 30.0%
ATTCAAAGCAACTAATAGGT+GGG + chr3_1:94409507-94409526 None:intergenic 30.0%
AATTCAAAGCAACTAATAGG+TGG + chr3_1:94409508-94409527 None:intergenic 30.0%
AAAGGGAAAACAAAATTGCA+AGG + chr3_1:94409548-94409567 None:intergenic 30.0%
! TTGTCACTGTATTTTTCATG+TGG + chr3_1:94410211-94410230 None:intergenic 30.0%
ACATGAAAAATACAGTGACA+AGG - chr3_1:94410210-94410229 Msa0389540:intron 30.0%
TAATGACTTACAGTATGGAA+TGG + chr3_1:94410447-94410466 None:intergenic 30.0%
TTCATTGAATAGTGATTCTC+TGG - chr3_1:94410544-94410563 Msa0389540:intron 30.0%
AGCAACATAAAATCTGCTAA+TGG + chr3_1:94410658-94410677 None:intergenic 30.0%
!! ATGTTGCTATTGTATTTTGG+AGG - chr3_1:94410670-94410689 Msa0389540:CDS 30.0%
TAAGAAAATGGGGTTAAATG+GGG + chr3_1:94410702-94410721 None:intergenic 30.0%
GTAAGAAAATGGGGTTAAAT+GGG + chr3_1:94410703-94410722 None:intergenic 30.0%
AGTAAGAAAATGGGGTTAAA+TGG + chr3_1:94410704-94410723 None:intergenic 30.0%
CACATTAGAAATAAAGTGCA+TGG + chr3_1:94411055-94411074 None:intergenic 30.0%
ACAATGAAAACTTGAGTGAA+CGG + chr3_1:94411187-94411206 None:intergenic 30.0%
!!! TGTTCTGTATTTTTCAAGCA+TGG - chr3_1:94411204-94411223 Msa0389540:intron 30.0%
TAGGAAAAATTGGATGTTTG+GGG + chr3_1:94412144-94412163 None:intergenic 30.0%
AAATGTGTGTACTAATTGCT+TGG + chr3_1:94412582-94412601 None:intergenic 30.0%
! AAGTTTCTTACATTTGAGAC+CGG - chr3_1:94413064-94413083 Msa0389540:intron 30.0%
TGGACTCTAAACATTAACAA+AGG + chr3_1:94413278-94413297 None:intergenic 30.0%
GCCTTAATACTAGTTATATG+TGG - chr3_1:94413316-94413335 Msa0389540:intron 30.0%
CCCACATATAACTAGTATTA+AGG + chr3_1:94413320-94413339 None:intergenic 30.0%
TGATATCAAAGAGTTGTGTA+AGG - chr3_1:94413401-94413420 Msa0389540:intron 30.0%
AAATATTTGGCTGTTTAGAG+TGG + chr3_1:94413472-94413491 None:intergenic 30.0%
TTATAAATGTTCAACAACGC+TGG - chr3_1:94413518-94413537 Msa0389540:intron 30.0%
!!! TCATCTTTTAGAATTTCGGT+TGG - chr3_1:94413557-94413576 Msa0389540:intron 30.0%
!!! CATCTTTTAGAATTTCGGTT+GGG - chr3_1:94413558-94413577 Msa0389540:intron 30.0%
CTGAAAATGTGATATAAGTG+AGG + chr3_1:94413688-94413707 None:intergenic 30.0%
! CTCACTTATATCACATTTTC+AGG - chr3_1:94413686-94413705 Msa0389540:intron 30.0%
CCTAAGTAAATAAACTTCCA+CGG + chr3_1:94413765-94413784 None:intergenic 30.0%
CAGCATACTTGTGTTTATTT+GGG + chr3_1:94413874-94413893 None:intergenic 30.0%
ACAGCATACTTGTGTTTATT+TGG + chr3_1:94413875-94413894 None:intergenic 30.0%
TGCTTCATAATTCAGGTATT+CGG + chr3_1:94414182-94414201 None:intergenic 30.0%
!! GCAAAGGGTGTTTATATATA+GGG + chr3_1:94414243-94414262 None:intergenic 30.0%
GTAATGTGTGAAATGCTTAA+AGG - chr3_1:94414330-94414349 Msa0389540:intron 30.0%
!! CTTAAAGGTTTGCTTTGTTT+CGG - chr3_1:94414345-94414364 Msa0389540:intron 30.0%
AGTTAATAGTGAAATATCGG+GGG + chr3_1:94414430-94414449 None:intergenic 30.0%
TAATATCTCCATACTTCAAC+CGG + chr3_1:94414793-94414812 None:intergenic 30.0%
! GTTCTAAATAGAATTACCTC+AGG + chr3_1:94414832-94414851 None:intergenic 30.0%
CATTCAATGTACTCAATAGA+GGG + chr3_1:94414902-94414921 None:intergenic 30.0%
ACATTCAATGTACTCAATAG+AGG + chr3_1:94414903-94414922 None:intergenic 30.0%
TGAATGTGATATGCATTTGT+AGG - chr3_1:94414916-94414935 Msa0389540:intron 30.0%
TGGCAATAAAACTCAAAACT+CGG + chr3_1:94415024-94415043 None:intergenic 30.0%
CAGGACAATTGTTAATCAAT+AGG + chr3_1:94415163-94415182 None:intergenic 30.0%
TGATTAACAATTGTCCTGTA+TGG - chr3_1:94415165-94415184 Msa0389540:intron 30.0%
GATTAACAATTGTCCTGTAT+GGG - chr3_1:94415166-94415185 Msa0389540:intron 30.0%
!!! CAAATTTTTTGGTTGGATCA+TGG + chr3_1:94415359-94415378 None:intergenic 30.0%
!!! TTGTTGGCAAATTTTTTGGT+TGG + chr3_1:94415366-94415385 None:intergenic 30.0%
!! GTGCCATGTTATTTCAAAAT+AGG + chr3_1:94415442-94415461 None:intergenic 30.0%
GTAAAGGTTAAACTAAAGCA+AGG - chr3_1:94416274-94416293 Msa0389540:intron 30.0%
AAAATTGCAATGAGCATATC+TGG - chr3_1:94416301-94416320 Msa0389540:intron 30.0%
CTATTGATGCTGATGTTAAA+TGG - chr3_1:94416401-94416420 Msa0389540:intron 30.0%
ACTTGTGCAATAAACTTTGT+AGG - chr3_1:94416431-94416450 Msa0389540:intron 30.0%
AGGGAAATTGTTAGTTAATG+AGG - chr3_1:94416692-94416711 Msa0389540:intron 30.0%
GGGAAATTGTTAGTTAATGA+GGG - chr3_1:94416693-94416712 Msa0389540:intron 30.0%
GGAAATTGTTAGTTAATGAG+GGG - chr3_1:94416694-94416713 Msa0389540:intron 30.0%
AGTAGTGACTTAATTCTACA+AGG - chr3_1:94416796-94416815 Msa0389540:CDS 30.0%
GTAGTGACTTAATTCTACAA+GGG - chr3_1:94416797-94416816 Msa0389540:CDS 30.0%
TAGTGACTTAATTCTACAAG+GGG - chr3_1:94416798-94416817 Msa0389540:CDS 30.0%
CTTTCACTTTCTGATGATAA+AGG - chr3_1:94416989-94417008 Msa0389540:CDS 30.0%
TTCAACTAAGACAGATGATA+AGG - chr3_1:94417352-94417371 Msa0389540:intron 30.0%
!! TTGTGTCATTTAGCTTATTG+TGG + chr3_1:94417532-94417551 None:intergenic 30.0%
!! TGGAGTACTGGAATTATAAA+AGG + chr3_1:94417564-94417583 None:intergenic 30.0%
TAAAAACATGCAATGCATTG+CGG + chr3_1:94417593-94417612 None:intergenic 30.0%
TCTTCATTATCTGTGTATGT+TGG - chr3_1:94417889-94417908 Msa0389540:intron 30.0%
TCCATTACTTTAAATGAGAG+TGG - chr3_1:94417945-94417964 Msa0389540:CDS 30.0%
! ACCACTCTCATTTAAAGTAA+TGG + chr3_1:94417949-94417968 None:intergenic 30.0%
TTACTTTAAATGAGAGTGGT+TGG - chr3_1:94417949-94417968 Msa0389540:CDS 30.0%
ACTTACTTGAGTCTAAACAA+GGG + chr3_1:94417976-94417995 None:intergenic 30.0%
AACTTACTTGAGTCTAAACA+AGG + chr3_1:94417977-94417996 None:intergenic 30.0%
ACTCAAGTAAGTTCTATCAA+CGG - chr3_1:94417984-94418003 Msa0389540:CDS 30.0%
AACGGATAAATGAACTTTCA+AGG - chr3_1:94418002-94418021 Msa0389540:CDS 30.0%
! CAAGGTTGCTTATATTGATT+AGG - chr3_1:94418020-94418039 Msa0389540:CDS 30.0%
TATGTTGAAGAGATTGATGT+CGG - chr3_1:94418212-94418231 Msa0389540:intron 30.0%
! ATTCATTTTCCCTTACAACT+AGG - chr3_1:94418515-94418534 Msa0389540:intron 30.0%
! TTCATTTTCCCTTACAACTA+GGG - chr3_1:94418516-94418535 Msa0389540:intron 30.0%
TAATGTCTGTTAGATGAACA+GGG + chr3_1:94418753-94418772 None:intergenic 30.0%
TTAATGTCTGTTAGATGAAC+AGG + chr3_1:94418754-94418773 None:intergenic 30.0%
GAAACTACTTGTAATCAATC+GGG + chr3_1:94418802-94418821 None:intergenic 30.0%
GGAAACTACTTGTAATCAAT+CGG + chr3_1:94418803-94418822 None:intergenic 30.0%
TATGGAGCTCAATTTAATCT+GGG + chr3_1:94418824-94418843 None:intergenic 30.0%
ATATGGAGCTCAATTTAATC+TGG + chr3_1:94418825-94418844 None:intergenic 30.0%
GATTAAATTGAGCTCCATAT+AGG - chr3_1:94418825-94418844 Msa0389540:intron 30.0%
TGAATCCAAAGAAGAAAGTT+TGG - chr3_1:94419241-94419260 Msa0389540:intron 30.0%
GAATCCAAAGAAGAAAGTTT+GGG - chr3_1:94419242-94419261 Msa0389540:intron 30.0%
! CAGAGAGATGCAATTTTAAA+AGG - chr3_1:94419409-94419428 Msa0389540:CDS 30.0%
ATCTGATAGTCAGATTGTAA+GGG + chr3_1:94419454-94419473 None:intergenic 30.0%
AATCTGATAGTCAGATTGTA+AGG + chr3_1:94419455-94419474 None:intergenic 30.0%
TAATCAAGATGGTAACAAGT+TGG + chr3_1:94419588-94419607 None:intergenic 30.0%
! TTGGGGTTACATTTTACTAT+GGG - chr3_1:94419685-94419704 Msa0389540:CDS 30.0%
AAAAATTGCCTTTCATAGGT+TGG + chr3_1:94419859-94419878 None:intergenic 30.0%
!!! ACCTATGAAAGGCAATTTTT+TGG - chr3_1:94419859-94419878 Msa0389540:five_prime_UTR 30.0%
TCCAAAAAATTGCCTTTCAT+AGG + chr3_1:94419863-94419882 None:intergenic 30.0%
!! CTGAAAGTTTTTAGATGTTC+GGG - chr3_1:94419943-94419962 Msa0389540:intron 30.0%
ACCCTTGATATAAGACAATT+CGG + chr3_1:94420019-94420038 None:intergenic 30.0%
TGTCTTATATCAAGGGTTAT+CGG - chr3_1:94420022-94420041 Msa0389540:five_prime_UTR 30.0%
TGAGTGATTGAATCTAGGTT+CGG + chr3_1:94407267-94407286 None:intergenic 35.0%
TTTGGTGAGTGATTGAATCT+AGG + chr3_1:94407272-94407291 None:intergenic 35.0%
TCAATCACTCACCAAAATGA+CGG - chr3_1:94407276-94407295 Msa0389540:intron 35.0%
GTTTCGAAATTCACGTGTAT+TGG - chr3_1:94407497-94407516 Msa0389540:three_prime_UTR 35.0%
TACAATGCGATTTACATCTG+CGG - chr3_1:94407584-94407603 Msa0389540:three_prime_UTR 35.0%
! CCTTCTGACTGGTTAAAATT+AGG + chr3_1:94407797-94407816 None:intergenic 35.0%
!! CCTAATTTTAACCAGTCAGA+AGG - chr3_1:94407794-94407813 Msa0389540:CDS 35.0%
TGCAAGCCTATATTTCATGA+TGG - chr3_1:94407827-94407846 Msa0389540:CDS 35.0%
GCAAGCCTATATTTCATGAT+GGG - chr3_1:94407828-94407847 Msa0389540:CDS 35.0%
ACGTACCCATCATGAAATAT+AGG + chr3_1:94407836-94407855 None:intergenic 35.0%
!! ATGTGGACTAGAGTTGTTAA+GGG - chr3_1:94407877-94407896 Msa0389540:intron 35.0%
! ACTGTTTTCATAAGCAGTCT+TGG + chr3_1:94408080-94408099 None:intergenic 35.0%
! AAGTAAAAGTAGGCACTGTT+TGG + chr3_1:94408235-94408254 None:intergenic 35.0%
!! AGTTCAGTGTTTTTGATCCA+AGG - chr3_1:94408525-94408544 Msa0389540:CDS 35.0%
TAGATACCATGCTATTCACA+AGG - chr3_1:94408623-94408642 Msa0389540:intron 35.0%
!! GTTTCATGCATGAAGTGTTT+TGG - chr3_1:94408879-94408898 Msa0389540:CDS 35.0%
!!! ATGCATGAAGTGTTTTGGAA+AGG - chr3_1:94408884-94408903 Msa0389540:CDS 35.0%
TTTACTGCGATACATGCAAA+AGG - chr3_1:94408944-94408963 Msa0389540:intron 35.0%
TCAATTCTGTCGGATTTAGA+AGG + chr3_1:94409062-94409081 None:intergenic 35.0%
TTGGGAATCTTCAATTCTGT+CGG + chr3_1:94409072-94409091 None:intergenic 35.0%
AAAGCAAGAATTTAGGGAAG+GGG + chr3_1:94409112-94409131 None:intergenic 35.0%
! TGCCATATGTGTGATTGTTT+TGG - chr3_1:94409177-94409196 Msa0389540:intron 35.0%
TGTTTGGAAGTTATGAGAGT+AGG - chr3_1:94409214-94409233 Msa0389540:intron 35.0%
GTTTGGAAGTTATGAGAGTA+GGG - chr3_1:94409215-94409234 Msa0389540:intron 35.0%
AAATATATAGACCTAGCCCT+TGG + chr3_1:94409382-94409401 None:intergenic 35.0%
! GGGCTAGGTCTATATATTTT+TGG - chr3_1:94409383-94409402 Msa0389540:intron 35.0%
!!! CATGTTTTGGCATATGTAAC+AGG - chr3_1:94409979-94409998 Msa0389540:CDS 35.0%
TAGTCCTCGTATTTGTGATA+CGG - chr3_1:94410012-94410031 Msa0389540:CDS 35.0%
GCAACTTATCTTCCAAAAGA+GGG + chr3_1:94410057-94410076 None:intergenic 35.0%
TGCAACTTATCTTCCAAAAG+AGG + chr3_1:94410058-94410077 None:intergenic 35.0%
ATACATCAATGAGATGTCTG+TGG - chr3_1:94410081-94410100 Msa0389540:intron 35.0%
! CTGTATTTTTCATGTGGAAC+AGG + chr3_1:94410205-94410224 None:intergenic 35.0%
! ACAAGGTAAGTTTTCCCTTT+GGG - chr3_1:94410227-94410246 Msa0389540:intron 35.0%
!! GACATTTTGAAAGACCCAAA+GGG + chr3_1:94410244-94410263 None:intergenic 35.0%
CTTTGGGTCTTTCAAAATGT+CGG - chr3_1:94410243-94410262 Msa0389540:intron 35.0%
!! ATTGGAAGGTGTTCTATGTT+TGG - chr3_1:94410304-94410323 Msa0389540:intron 35.0%
! TGTGGAGTTGTTTCAGTTTA+TGG - chr3_1:94410407-94410426 Msa0389540:intron 35.0%
! GTGGAGTTGTTTCAGTTTAT+GGG - chr3_1:94410408-94410427 Msa0389540:intron 35.0%
! GTTGTTTCAGTTTATGGGAA+AGG - chr3_1:94410413-94410432 Msa0389540:intron 35.0%
!! TCTGCTAATGGATGCAATTT+TGG + chr3_1:94410646-94410665 None:intergenic 35.0%
! AAGTACTGTGTGCAATCATT+GGG + chr3_1:94410958-94410977 None:intergenic 35.0%
! AATGGTGGAAAACACTGTAA+CGG + chr3_1:94410999-94411018 None:intergenic 35.0%
GCGCAAATACTATAACATGA+TGG + chr3_1:94411340-94411359 None:intergenic 35.0%
AGAACCATAGTTATCAATCC+CGG + chr3_1:94411381-94411400 None:intergenic 35.0%
!! ATCTCGATTTTGACAACCAT+GGG + chr3_1:94411487-94411506 None:intergenic 35.0%
! TAGAGAAATGCTGTTTGGTA+CGG - chr3_1:94411852-94411871 Msa0389540:intron 35.0%
! TTTATCTCTTTTCCACGTGT+TGG - chr3_1:94411908-94411927 Msa0389540:intron 35.0%
AGCAAAAAGGCTCATCAAAA+GGG + chr3_1:94412059-94412078 None:intergenic 35.0%
ATAGAAAGAATTGGGGAAGA+AGG + chr3_1:94412099-94412118 None:intergenic 35.0%
! TCGAGAGCATAGAAAGAATT+GGG + chr3_1:94412107-94412126 None:intergenic 35.0%
! TTCGAGAGCATAGAAAGAAT+TGG + chr3_1:94412108-94412127 None:intergenic 35.0%
! TGGAGTTAGTTTGAATGATG+AGG - chr3_1:94412333-94412352 Msa0389540:intron 35.0%
! GGAGTTAGTTTGAATGATGA+GGG - chr3_1:94412334-94412353 Msa0389540:intron 35.0%
! TTAGTTTGAATGATGAGGGA+GGG - chr3_1:94412338-94412357 Msa0389540:intron 35.0%
TAAAACAGAGCTATCATGTG+TGG + chr3_1:94412403-94412422 None:intergenic 35.0%
!! TAGAGGATTGCTATTTGGTA+CGG + chr3_1:94412541-94412560 None:intergenic 35.0%
AAGAATACCAAGCAATTAGC+AGG - chr3_1:94412605-94412624 Msa0389540:intron 35.0%
!!! CTGCAAGCTTTTTTCCTTTT+CGG + chr3_1:94412686-94412705 None:intergenic 35.0%
! TTCTTACATTTTAGACCGGA+GGG + chr3_1:94412951-94412970 None:intergenic 35.0%
! TTTCTTACATTTTAGACCGG+AGG + chr3_1:94412952-94412971 None:intergenic 35.0%
GAATAAAGAAATACTCCCTC+CGG + chr3_1:94413086-94413105 None:intergenic 35.0%
AGCAATTTGACAGAGTAGAA+TGG + chr3_1:94413213-94413232 None:intergenic 35.0%
TAGAGTCCAATATTGGATAG+TGG - chr3_1:94413289-94413308 Msa0389540:intron 35.0%
!! TCCAATATTGGATAGTGGAA+TGG - chr3_1:94413294-94413313 Msa0389540:intron 35.0%
! TCAAACCTCATTTTACAACC+CGG - chr3_1:94413340-94413359 Msa0389540:intron 35.0%
!! ATTTTACAACCCGGTTTTGT+AGG - chr3_1:94413349-94413368 Msa0389540:intron 35.0%
!! TTTTACAACCCGGTTTTGTA+GGG - chr3_1:94413350-94413369 Msa0389540:intron 35.0%
ATAACTCAACCCTACAAAAC+CGG + chr3_1:94413362-94413381 None:intergenic 35.0%
TAATAGGTGAAGACAAGTAC+AGG - chr3_1:94413618-94413637 Msa0389540:intron 35.0%
AATAGGTGAAGACAAGTACA+GGG - chr3_1:94413619-94413638 Msa0389540:intron 35.0%
TTTGTGTCAAATTGAAACCG+TGG - chr3_1:94413745-94413764 Msa0389540:intron 35.0%
CCGTGGAAGTTTATTTACTT+AGG - chr3_1:94413762-94413781 Msa0389540:intron 35.0%
AGACATTTAACATGACAAGC+AGG + chr3_1:94413796-94413815 None:intergenic 35.0%
!!! TTTGGGAAAGCTTTTTTCCA+GGG + chr3_1:94413857-94413876 None:intergenic 35.0%
!!! ATTTGGGAAAGCTTTTTTCC+AGG + chr3_1:94413858-94413877 None:intergenic 35.0%
TGACATAATGGCAAAGCAAA+AGG + chr3_1:94413956-94413975 None:intergenic 35.0%
ATGTTTCCATCTACTCTACT+TGG - chr3_1:94414115-94414134 Msa0389540:intron 35.0%
TACTTGGAACTGGTCAAAAT+TGG - chr3_1:94414131-94414150 Msa0389540:intron 35.0%
GAATACCTGAATTATGAAGC+AGG - chr3_1:94414181-94414200 Msa0389540:intron 35.0%
ACTAACCTGCTTCATAATTC+AGG + chr3_1:94414189-94414208 None:intergenic 35.0%
TGTTTATATATAGGGACGGA+GGG + chr3_1:94414277-94414296 None:intergenic 35.0%
! AGGGTGTTTATATATAGGGA+CGG + chr3_1:94414273-94414292 None:intergenic 35.0%
!! GGCAAAGGGTGTTTATATAT+AGG + chr3_1:94414244-94414263 None:intergenic 35.0%
ACCCTTTGCCTCTAATAAAA+GGG - chr3_1:94414254-94414273 Msa0389540:intron 35.0%
! ACCCTTTTATTAGAGGCAAA+GGG + chr3_1:94414258-94414277 None:intergenic 35.0%
! AGGGTGTTTATATATAGGGA+CGG - chr3_1:94414273-94414292 Msa0389540:intron 35.0%
TGTTTATATATAGGGACGGA+GGG - chr3_1:94414277-94414296 Msa0389540:intron 35.0%
CTAATATTCCGGTTGAAGTA+TGG - chr3_1:94414782-94414801 Msa0389540:intron 35.0%
GCTAGTTGCTACAAATGATT+AGG - chr3_1:94415104-94415123 Msa0389540:intron 35.0%
ACTTTGTCTTGTAAAGGTCA+AGG - chr3_1:94415285-94415304 Msa0389540:intron 35.0%
CATATATGCAGCAACTTTGT+TGG + chr3_1:94415382-94415401 None:intergenic 35.0%
CAACAAAGTTGCTGCATATA+TGG - chr3_1:94415380-94415399 Msa0389540:intron 35.0%
ATACATAGAGTCAATGGAGA+AGG - chr3_1:94415407-94415426 Msa0389540:intron 35.0%
TTGAAATAACATGGCACTGT+AGG - chr3_1:94415445-94415464 Msa0389540:intron 35.0%
!! ATAAGGCTTGTTGTTGTTGT+TGG - chr3_1:94415644-94415663 Msa0389540:intron 35.0%
! GTTTAGGATTGCCATAACAA+TGG - chr3_1:94415905-94415924 Msa0389540:intron 35.0%
AAAAACTAACAACACTAGGC+TGG - chr3_1:94416074-94416093 Msa0389540:intron 35.0%
TGCATATTTGCAGGTAACTT+TGG - chr3_1:94416333-94416352 Msa0389540:intron 35.0%
! ATTGCTACGTTCCCTATTTT+TGG - chr3_1:94416357-94416376 Msa0389540:intron 35.0%
AGTATAAAAATTCGGGGGAA+GGG + chr3_1:94416383-94416402 None:intergenic 35.0%
TAGTATAAAAATTCGGGGGA+AGG + chr3_1:94416384-94416403 None:intergenic 35.0%
TTGATGCTGATGTTAAATGG+CGG - chr3_1:94416404-94416423 Msa0389540:intron 35.0%
! CTTTGTAGGAAACTGAGTTT+TGG - chr3_1:94416445-94416464 Msa0389540:intron 35.0%
GTATCTTCTTGCTTGTTTGT+TGG - chr3_1:94416530-94416549 Msa0389540:intron 35.0%
AGACTGAAAGATGGCATAAA+AGG + chr3_1:94416558-94416577 None:intergenic 35.0%
ATTACCTCAAGACTGAAAGA+TGG + chr3_1:94416567-94416586 None:intergenic 35.0%
!! GAGGATTTTGTTATGAGTTG+AGG - chr3_1:94416661-94416680 Msa0389540:CDS 35.0%
! TTTGTTATGAGTTGAGGAGT+TGG - chr3_1:94416667-94416686 Msa0389540:CDS 35.0%
! TTGTTATGAGTTGAGGAGTT+GGG - chr3_1:94416668-94416687 Msa0389540:CDS 35.0%
AATTGTTAGTTAATGAGGGG+AGG - chr3_1:94416697-94416716 Msa0389540:intron 35.0%
AGTGACTTAATTCTACAAGG+GGG - chr3_1:94416799-94416818 Msa0389540:CDS 35.0%
AACAGAGAAGATCAAAGTCT+TGG + chr3_1:94416920-94416939 None:intergenic 35.0%
! CTTTGATCTTCTCTGTTTTC+TGG - chr3_1:94416923-94416942 Msa0389540:CDS 35.0%
TTGATAGAGTAAAAAGACCC+TGG - chr3_1:94417017-94417036 Msa0389540:intron 35.0%
TGATAGAGTAAAAAGACCCT+GGG - chr3_1:94417018-94417037 Msa0389540:intron 35.0%
! TGGTGTTCCAATTTTATGAC+CGG + chr3_1:94417056-94417075 None:intergenic 35.0%
! CTTCTTCATCTTTCTGGTAA+AGG + chr3_1:94417177-94417196 None:intergenic 35.0%
CTTCTACTTCTTCATCTTTC+TGG + chr3_1:94417183-94417202 None:intergenic 35.0%
ATGAAGAAGTAGAAGTCTTC+AGG - chr3_1:94417188-94417207 Msa0389540:intron 35.0%
AGGCAGTTGCTATATTCTTA+AGG + chr3_1:94417464-94417483 None:intergenic 35.0%
GAGGTGAGAGATATTCTTAA+AGG + chr3_1:94417484-94417503 None:intergenic 35.0%
CAAACGAGAAATGCCTATAT+TGG + chr3_1:94417674-94417693 None:intergenic 35.0%
CAATATAGGCATTTCTCGTT+TGG - chr3_1:94417672-94417691 Msa0389540:intron 35.0%
!! GTTCTGAGATATCAAAATCC+TGG - chr3_1:94417749-94417768 Msa0389540:intron 35.0%
TGAGATATCAAAATCCTGGA+CGG - chr3_1:94417753-94417772 Msa0389540:intron 35.0%
!! TTAACAGCTTTAGGCTTGAT+TGG - chr3_1:94417920-94417939 Msa0389540:CDS 35.0%
AACCAGAAATTACCATCACA+AGG - chr3_1:94418129-94418148 Msa0389540:intron 35.0%
TATACCACTTGATGAAATGC+AGG - chr3_1:94418277-94418296 Msa0389540:CDS 35.0%
ATGAAATGCAGGTTTGTGTT+TGG - chr3_1:94418288-94418307 Msa0389540:CDS 35.0%
AATTGTGTTCTTCCTTACCA+TGG + chr3_1:94418498-94418517 None:intergenic 35.0%
! TCATTTTCCCTTACAACTAG+GGG - chr3_1:94418517-94418536 Msa0389540:intron 35.0%
TACTTGTAATCAATCGGGAA+GGG + chr3_1:94418797-94418816 None:intergenic 35.0%
ATAAATGGCAACCTGATTCT+GGG + chr3_1:94418860-94418879 None:intergenic 35.0%
AATAAATGGCAACCTGATTC+TGG + chr3_1:94418861-94418880 None:intergenic 35.0%
TTATCCACATTCAGAAGCTA+GGG + chr3_1:94418936-94418955 None:intergenic 35.0%
ATTATCCACATTCAGAAGCT+AGG + chr3_1:94418937-94418956 None:intergenic 35.0%
TATAATATAGCAGCAGGTGA+TGG + chr3_1:94419036-94419055 None:intergenic 35.0%
TTTCTCTCATCGAAGTATGT+GGG - chr3_1:94419087-94419106 Msa0389540:intron 35.0%
TTTGGATTCAAGAGTTCATC+TGG + chr3_1:94419231-94419250 None:intergenic 35.0%
! GTTGGGGTTACATTTTACTA+TGG - chr3_1:94419684-94419703 Msa0389540:CDS 35.0%
! TGGGGTTACATTTTACTATG+GGG - chr3_1:94419686-94419705 Msa0389540:CDS 35.0%
!!! GGATTTTTAGAAGTTCTGGA+GGG + chr3_1:94419777-94419796 None:intergenic 35.0%
!! AGGATTTTTAGAAGTTCTGG+AGG + chr3_1:94419778-94419797 None:intergenic 35.0%
TCCCGAATTGTCTTATATCA+AGG - chr3_1:94420014-94420033 Msa0389540:intron 35.0%
CCCTTGATATAAGACAATTC+GGG + chr3_1:94420018-94420037 None:intergenic 35.0%
CCCGAATTGTCTTATATCAA+GGG - chr3_1:94420015-94420034 Msa0389540:intron 35.0%
TATGTGGATGCAGATTGGAT+CGG + chr3_1:94406987-94407006 None:intergenic 40.0%
AAAAGAGAGAATGTGAGCGA+GGG + chr3_1:94407189-94407208 None:intergenic 40.0%
AAAAAGAGAGAATGTGAGCG+AGG + chr3_1:94407190-94407209 None:intergenic 40.0%
AAAAGCAATAGCGAGAGAGA+GGG + chr3_1:94407215-94407234 None:intergenic 40.0%
! TCACCAAAATGACGGAAGAT+CGG - chr3_1:94407284-94407303 Msa0389540:intron 40.0%
! TTTCCGATCTTCCGTCATTT+TGG + chr3_1:94407290-94407309 None:intergenic 40.0%
TGAGGAACGTTGTTGACATA+GGG + chr3_1:94407367-94407386 None:intergenic 40.0%
ATGAGGAACGTTGTTGACAT+AGG + chr3_1:94407368-94407387 None:intergenic 40.0%
TTGCTCGATATTGTCGTCTT+AGG - chr3_1:94407558-94407577 Msa0389540:three_prime_UTR 40.0%
TGCTCGATATTGTCGTCTTA+GGG - chr3_1:94407559-94407578 Msa0389540:three_prime_UTR 40.0%
!! TGTTTATCGGCTCTATGCAT+TGG - chr3_1:94407744-94407763 Msa0389540:CDS 40.0%
! TGATGGGTACGTTGTTATGT+TGG - chr3_1:94407844-94407863 Msa0389540:intron 40.0%
ATGTTGGCATGACATTGATG+TGG - chr3_1:94407860-94407879 Msa0389540:intron 40.0%
!! GATGTGGACTAGAGTTGTTA+AGG - chr3_1:94407876-94407895 Msa0389540:intron 40.0%
TGAGGTTTGTGAGACTGTTT+AGG - chr3_1:94407986-94408005 Msa0389540:intron 40.0%
TTATTACACCTGTTTGGCAC+TGG - chr3_1:94408551-94408570 Msa0389540:CDS 40.0%
TATTACACCTGTTTGGCACT+GGG - chr3_1:94408552-94408571 Msa0389540:CDS 40.0%
ATACCATGCTATTCACAAGG+AGG - chr3_1:94408626-94408645 Msa0389540:intron 40.0%
! CGAAAATAATTGGCTCTCTG+AGG - chr3_1:94408743-94408762 Msa0389540:CDS 40.0%
ATTGAAGATTCCCAAGTGCA+AGG - chr3_1:94409077-94409096 Msa0389540:intron 40.0%
GAGTTTACTACCTTGCACTT+GGG + chr3_1:94409090-94409109 None:intergenic 40.0%
AACTGCATTATTCAGATCCC+TGG - chr3_1:94409143-94409162 Msa0389540:intron 40.0%
GGATGAACTTAGGCTATGTT+TGG - chr3_1:94409198-94409217 Msa0389540:intron 40.0%
AAGCAACTAATAGGTGGGAA+GGG + chr3_1:94409502-94409521 None:intergenic 40.0%
AAAGCAACTAATAGGTGGGA+AGG + chr3_1:94409503-94409522 None:intergenic 40.0%
AGTTGTTTGGAAGTCTACAG+AGG - chr3_1:94409945-94409964 Msa0389540:CDS 40.0%
! GGAAGTCTACAGAGGTTTTA+AGG - chr3_1:94409953-94409972 Msa0389540:CDS 40.0%
!!! GGTTTTAAGGCGACATGTTT+TGG - chr3_1:94409966-94409985 Msa0389540:CDS 40.0%
! ATTTCTTGAGCTCCCTCTTT+TGG - chr3_1:94410042-94410061 Msa0389540:intron 40.0%
ATCAATGAGATGTCTGTGGT+GGG - chr3_1:94410085-94410104 Msa0389540:intron 40.0%
! CATTACCAGAGATCTGAAGT+GGG - chr3_1:94410174-94410193 Msa0389540:intron 40.0%
! ATTACCAGAGATCTGAAGTG+GGG - chr3_1:94410175-94410194 Msa0389540:intron 40.0%
! GACAAGGTAAGTTTTCCCTT+TGG - chr3_1:94410226-94410245 Msa0389540:intron 40.0%
!! CGACATTTTGAAAGACCCAA+AGG + chr3_1:94410245-94410264 None:intergenic 40.0%
GGATATATATCAATCACGGC+AGG - chr3_1:94410342-94410361 Msa0389540:intron 40.0%
GAAACAACTCCACATTCTCA+GGG + chr3_1:94410401-94410420 None:intergenic 40.0%
TGAAACAACTCCACATTCTC+AGG + chr3_1:94410402-94410421 None:intergenic 40.0%
AGGCAGGAAAAGTCAGAAAA+TGG + chr3_1:94410801-94410820 None:intergenic 40.0%
!! GAAGTACTGTGTGCAATCAT+TGG + chr3_1:94410959-94410978 None:intergenic 40.0%
CATGGACGATATTGAACAAC+TGG + chr3_1:94411037-94411056 None:intergenic 40.0%
AGTTGCATGCTGCAATATAG+GGG + chr3_1:94411099-94411118 None:intergenic 40.0%
GAGTTGCATGCTGCAATATA+GGG + chr3_1:94411100-94411119 None:intergenic 40.0%
AGAGTTGCATGCTGCAATAT+AGG + chr3_1:94411101-94411120 None:intergenic 40.0%
GAAAACTTGAGTGAACGGAA+AGG + chr3_1:94411182-94411201 None:intergenic 40.0%
! CTATCCGGGATTGATAACTA+TGG - chr3_1:94411374-94411393 Msa0389540:intron 40.0%
!! GATCTCGATTTTGACAACCA+TGG + chr3_1:94411488-94411507 None:intergenic 40.0%
AGATCTCACCTAAGATCGTT+CGG - chr3_1:94411503-94411522 Msa0389540:intron 40.0%
TTCAATACCCGAACGATCTT+AGG + chr3_1:94411514-94411533 None:intergenic 40.0%
! AGAGAAATGCTGTTTGGTAC+GGG - chr3_1:94411853-94411872 Msa0389540:intron 40.0%
!!! CTTTTAAGTTGGAAGCTGCT+AGG + chr3_1:94412017-94412036 None:intergenic 40.0%
GAGCAAAAAGGCTCATCAAA+AGG + chr3_1:94412060-94412079 None:intergenic 40.0%
! CGAGAGCATAGAAAGAATTG+GGG + chr3_1:94412106-94412125 None:intergenic 40.0%
AAATTGGATGTTTGGGGATG+AGG + chr3_1:94412138-94412157 None:intergenic 40.0%
ACATTGTTGAATGATGAGGG+AGG - chr3_1:94412239-94412258 Msa0389540:CDS 40.0%
CATTGTTGAATGATGAGGGA+GGG - chr3_1:94412240-94412259 Msa0389540:CDS 40.0%
! GTTAGTTTGAATGATGAGGG+AGG - chr3_1:94412337-94412356 Msa0389540:intron 40.0%
!! AGAGGATTGCTATTTGGTAC+GGG + chr3_1:94412540-94412559 None:intergenic 40.0%
CGAAAAGGAAAAAAGCTTGC+AGG - chr3_1:94412684-94412703 Msa0389540:intron 40.0%
AAAGGAAAAAAGCTTGCAGG+AGG - chr3_1:94412687-94412706 Msa0389540:intron 40.0%
!!! GCTTTTTTGTGAATCTGGGA+AGG + chr3_1:94412765-94412784 None:intergenic 40.0%
! TTTCTTACATTTGAGACCGG+AGG - chr3_1:94413067-94413086 Msa0389540:intron 40.0%
! TTCTTACATTTGAGACCGGA+GGG - chr3_1:94413068-94413087 Msa0389540:intron 40.0%
TAAGAAACTGGCTGGTATAG+TGG + chr3_1:94413142-94413161 None:intergenic 40.0%
AAGGTAGCATGCTAAGAAAC+TGG + chr3_1:94413154-94413173 None:intergenic 40.0%
ATAAAATGCAACAGTGGCTG+AGG + chr3_1:94413177-94413196 None:intergenic 40.0%
TTGACAGAGTAGAATGGTTG+TGG + chr3_1:94413207-94413226 None:intergenic 40.0%
GCCATTCCACTATCCAATAT+TGG + chr3_1:94413298-94413317 None:intergenic 40.0%
CAAAACCGGGTTGTAAAATG+AGG + chr3_1:94413348-94413367 None:intergenic 40.0%
TAACTCAACCCTACAAAACC+GGG + chr3_1:94413361-94413380 None:intergenic 40.0%
AGTTGTGTAAGGTCCATTGT+GGG - chr3_1:94413412-94413431 Msa0389540:intron 40.0%
CACAAGTTTCTAACCCACAA+TGG + chr3_1:94413428-94413447 None:intergenic 40.0%
AACAACGCTGGCATTATACT+CGG - chr3_1:94413530-94413549 Msa0389540:intron 40.0%
ATAGGTGAAGACAAGTACAG+GGG - chr3_1:94413620-94413639 Msa0389540:intron 40.0%
!!! TTGGGAAAGCTTTTTTCCAG+GGG + chr3_1:94413856-94413875 None:intergenic 40.0%
TGCTGTAAATCCTGATCAAC+AGG - chr3_1:94413889-94413908 Msa0389540:intron 40.0%
GTAATTAGAAGCCAGAGCAT+GGG + chr3_1:94413922-94413941 None:intergenic 40.0%
AGTAATTAGAAGCCAGAGCA+TGG + chr3_1:94413923-94413942 None:intergenic 40.0%
TTGCCATTATGTCATGCCAA+TGG - chr3_1:94413962-94413981 Msa0389540:intron 40.0%
GATCCATTGGCATGACATAA+TGG + chr3_1:94413968-94413987 None:intergenic 40.0%
CTAACACTGAAGAGATCCAT+TGG + chr3_1:94413981-94414000 None:intergenic 40.0%
CAATGGATCTCTTCAGTGTT+AGG - chr3_1:94413979-94413998 Msa0389540:intron 40.0%
CTCTTCAGTGTTAGGAATCT+TGG - chr3_1:94413987-94414006 Msa0389540:intron 40.0%
GTGTTTATATATAGGGACGG+AGG + chr3_1:94414276-94414295 None:intergenic 40.0%
CACCCTTTGCCTCTAATAAA+AGG - chr3_1:94414253-94414272 Msa0389540:intron 40.0%
! CACCCTTTTATTAGAGGCAA+AGG + chr3_1:94414259-94414278 None:intergenic 40.0%
GTGTTTATATATAGGGACGG+AGG - chr3_1:94414276-94414295 Msa0389540:intron 40.0%
! GGGAGTATATGTGAACGAAA+AGG - chr3_1:94414297-94414316 Msa0389540:intron 40.0%
TATTGAATGTTGGGCACGTT+TGG + chr3_1:94414655-94414674 None:intergenic 40.0%
CGTGCCCAACATTCAATAAA+TGG - chr3_1:94414657-94414676 Msa0389540:intron 40.0%
! GGGAAGTTTTCGAAGAGTAA+AGG - chr3_1:94414727-94414746 Msa0389540:CDS 40.0%
!! TTTTCGAAGAGTAAAGGCGT+CGG - chr3_1:94414733-94414752 Msa0389540:intron 40.0%
TACCGAGCTTCTGAATAACT+TGG - chr3_1:94414985-94415004 Msa0389540:intron 40.0%
ACCGAGCTTCTGAATAACTT+GGG - chr3_1:94414986-94415005 Msa0389540:intron 40.0%
TCCCAAGTTATTCAGAAGCT+CGG + chr3_1:94414990-94415009 None:intergenic 40.0%
!!! AGTTTTATTGCCAAACCTGC+AGG - chr3_1:94415031-94415050 Msa0389540:intron 40.0%
CATGATGACTGTGAGTATCT+TGG - chr3_1:94415136-94415155 Msa0389540:intron 40.0%
AATCTTCTGACTTCCCATAC+AGG + chr3_1:94415182-94415201 None:intergenic 40.0%
ATCAGGAACAGTGGGAATAA+TGG + chr3_1:94415319-94415338 None:intergenic 40.0%
CTTACATCATCAGGAACAGT+GGG + chr3_1:94415327-94415346 None:intergenic 40.0%
ACTTACATCATCAGGAACAG+TGG + chr3_1:94415328-94415347 None:intergenic 40.0%
! ACTGTTCCTGATGATGTAAG+TGG - chr3_1:94415327-94415346 Msa0389540:intron 40.0%
GGAGCAATACATAGAGTCAA+TGG - chr3_1:94415401-94415420 Msa0389540:intron 40.0%
CTTATCCCACTAAGTTGCAT+CGG + chr3_1:94415629-94415648 None:intergenic 40.0%
!!! GGTCTTATTTTCAGCAGCAA+TGG - chr3_1:94415877-94415896 Msa0389540:intron 40.0%
AGCAGCAATGGTGAAAGTTT+AGG - chr3_1:94415889-94415908 Msa0389540:intron 40.0%
TAGGATTGCCATAACAATGG+TGG - chr3_1:94415908-94415927 Msa0389540:intron 40.0%
AGGATTGCCATAACAATGGT+GGG - chr3_1:94415909-94415928 Msa0389540:intron 40.0%
! AATGGAGGTGGTAATGACAA+TGG - chr3_1:94415971-94415990 Msa0389540:intron 40.0%
CAAAGTAGACAAGTGCATTC+TGG + chr3_1:94416208-94416227 None:intergenic 40.0%
! GGCAGCAGTTTTCATAACAA+GGG + chr3_1:94416502-94416521 None:intergenic 40.0%
! CTTGTTATGAAAACTGCTGC+CGG - chr3_1:94416501-94416520 Msa0389540:intron 40.0%
TTGTTATGAAAACTGCTGCC+GGG - chr3_1:94416502-94416521 Msa0389540:intron 40.0%
AGCAAGAAGATACACAATCC+CGG + chr3_1:94416523-94416542 None:intergenic 40.0%
TATGCCATCTTTCAGTCTTG+AGG - chr3_1:94416560-94416579 Msa0389540:CDS 40.0%
! TAGTTAATGAGGGGAGGTTT+TGG - chr3_1:94416703-94416722 Msa0389540:intron 40.0%
!! GTAAGTGCCGGTCATAAAAT+TGG - chr3_1:94417046-94417065 Msa0389540:intron 40.0%
AACACCAAAGCCATTGTTCA+GGG - chr3_1:94417069-94417088 Msa0389540:intron 40.0%
GTCTTCAGGAAGAAGTTTGA+AGG - chr3_1:94417202-94417221 Msa0389540:intron 40.0%
! AGCAACATTTTCAGCAGCTT+CGG + chr3_1:94417260-94417279 None:intergenic 40.0%
ACCTCAAAGAATGTGACAAC+TGG - chr3_1:94417499-94417518 Msa0389540:intron 40.0%
AGCTAAATGACACAAACGGT+TGG - chr3_1:94417537-94417556 Msa0389540:intron 40.0%
GTAGCAAGCTTAACAGCTTT+AGG - chr3_1:94417911-94417930 Msa0389540:intron 40.0%
ATCAAGTGGAGCCAAAAACA+AGG - chr3_1:94418097-94418116 Msa0389540:intron 40.0%
! AGCCTTGTGATGGTAATTTC+TGG + chr3_1:94418134-94418153 None:intergenic 40.0%
! TCGAATATCAAGCCTTGTGA+TGG + chr3_1:94418144-94418163 None:intergenic 40.0%
ACAAGGCTTGATATTCGAGT+TGG - chr3_1:94418146-94418165 Msa0389540:intron 40.0%
!! TCGAGTTGGTCTCATAAAGA+AGG - chr3_1:94418160-94418179 Msa0389540:intron 40.0%
ACATACAGTGAATCTGCATC+AGG + chr3_1:94418197-94418216 None:intergenic 40.0%
CAAACCTGCATTTCATCAAG+TGG + chr3_1:94418284-94418303 None:intergenic 40.0%
! CATTTTCCCTTACAACTAGG+GGG - chr3_1:94418518-94418537 Msa0389540:intron 40.0%
ATACTACTACAGTAGCACCA+TGG + chr3_1:94418576-94418595 None:intergenic 40.0%
AAAGATGTAGTATGACCACG+TGG - chr3_1:94418614-94418633 Msa0389540:intron 40.0%
AAGATGTAGTATGACCACGT+GGG - chr3_1:94418615-94418634 Msa0389540:intron 40.0%
ATCTTAAACAACTACCCACG+TGG + chr3_1:94418632-94418651 None:intergenic 40.0%
AAGTGTGTTTGCTTGTGGTT+AGG - chr3_1:94418661-94418680 Msa0389540:intron 40.0%
AGTGTGTTTGCTTGTGGTTA+GGG - chr3_1:94418662-94418681 Msa0389540:intron 40.0%
ACTTGTAATCAATCGGGAAG+GGG + chr3_1:94418796-94418815 None:intergenic 40.0%
CTACTTGTAATCAATCGGGA+AGG + chr3_1:94418798-94418817 None:intergenic 40.0%
TGAGCTCCATATAGGTTAGT+AGG - chr3_1:94418833-94418852 Msa0389540:intron 40.0%
GAGCTCCATATAGGTTAGTA+GGG - chr3_1:94418834-94418853 Msa0389540:intron 40.0%
TATCCACATTCAGAAGCTAG+GGG + chr3_1:94418935-94418954 None:intergenic 40.0%
CTTTCTCTCATCGAAGTATG+TGG - chr3_1:94419086-94419105 Msa0389540:intron 40.0%
! AAAGGTGCACAGCAATAGAA+AGG + chr3_1:94419134-94419153 None:intergenic 40.0%
TTCTATTGCTGTGCACCTTT+AGG - chr3_1:94419134-94419153 Msa0389540:intron 40.0%
GTTCAACCAACTCAACCTAA+AGG + chr3_1:94419152-94419171 None:intergenic 40.0%
TGGAGAAAGAATCACATTCC+CGG - chr3_1:94419191-94419210 Msa0389540:intron 40.0%
GTCTCCCAAACTTTCTTCTT+TGG + chr3_1:94419249-94419268 None:intergenic 40.0%
!! ATCGCATATTTTAGACGAGC+TGG - chr3_1:94419553-94419572 Msa0389540:intron 40.0%
! ACAGTTGATACCTGTGTTGT+TGG - chr3_1:94419666-94419685 Msa0389540:CDS 40.0%
! CAGTTGATACCTGTGTTGTT+GGG - chr3_1:94419667-94419686 Msa0389540:CDS 40.0%
! AGTTGATACCTGTGTTGTTG+GGG - chr3_1:94419668-94419687 Msa0389540:CDS 40.0%
AAATGTAACCCCAACAACAC+AGG + chr3_1:94419679-94419698 None:intergenic 40.0%
! GGGGTTACATTTTACTATGG+GGG - chr3_1:94419687-94419706 Msa0389540:CDS 40.0%
AGGGTGGTAGATATAGATGA+GGG + chr3_1:94419758-94419777 None:intergenic 40.0%
!!! TTTTTAGAAGTTCTGGAGGG+TGG + chr3_1:94419774-94419793 None:intergenic 40.0%
AACGCACTCGGGTAAGATTA+GGG + chr3_1:94407114-94407133 None:intergenic 45.0%
! GTGGGTGTGAGTATAGCTTT+TGG + chr3_1:94407153-94407172 None:intergenic 45.0%
CAAAAGCAATAGCGAGAGAG+AGG + chr3_1:94407216-94407235 None:intergenic 45.0%
!! CTCTCTCGCTATTGCTTTTG+CGG - chr3_1:94407216-94407235 Msa0389540:intron 45.0%
! TTGAATCTAGGTTCGGTCAC+CGG + chr3_1:94407260-94407279 None:intergenic 45.0%
TTTCCTTCAACGGGAAGCTT+CGG + chr3_1:94407316-94407335 None:intergenic 45.0%
GAGGAACGTTGTTGACATAG+GGG + chr3_1:94407366-94407385 None:intergenic 45.0%
GTCAACAACGTTCCTCATCT+CGG - chr3_1:94407370-94407389 Msa0389540:intron 45.0%
GCTCGATATTGTCGTCTTAG+GGG - chr3_1:94407560-94407579 Msa0389540:three_prime_UTR 45.0%
TGCAACGGAGACTAAAGCAT+TGG - chr3_1:94407625-94407644 Msa0389540:CDS 45.0%
AACAATTGGAGCCTTCTGAC+TGG + chr3_1:94407808-94407827 None:intergenic 45.0%
AGACCTCCTTGTGAATAGCA+TGG + chr3_1:94408632-94408651 None:intergenic 45.0%
TTCACAAGGAGGTCTACGAT+TGG - chr3_1:94408637-94408656 Msa0389540:intron 45.0%
CATACTCACACCCTGGAATT+GGG + chr3_1:94409002-94409021 None:intergenic 45.0%
TCATACTCACACCCTGGAAT+TGG + chr3_1:94409003-94409022 None:intergenic 45.0%
TGTGAGTATGATTCTGCCAG+AGG - chr3_1:94409012-94409031 Msa0389540:intron 45.0%
GTGAGTATGATTCTGCCAGA+GGG - chr3_1:94409013-94409032 Msa0389540:intron 45.0%
TGAGTATGATTCTGCCAGAG+GGG - chr3_1:94409014-94409033 Msa0389540:intron 45.0%
GGAGTTTACTACCTTGCACT+TGG + chr3_1:94409091-94409110 None:intergenic 45.0%
ATGGCACACAAATGCTTCCA+GGG + chr3_1:94409163-94409182 None:intergenic 45.0%
TATGGCACACAAATGCTTCC+AGG + chr3_1:94409164-94409183 None:intergenic 45.0%
TGGAAGTTATGAGAGTAGGG+AGG - chr3_1:94409218-94409237 Msa0389540:intron 45.0%
GGAAGTTATGAGAGTAGGGA+GGG - chr3_1:94409219-94409238 Msa0389540:intron 45.0%
! ATCAAAGGACTTTGGAGGAG+AGG - chr3_1:94409242-94409261 Msa0389540:intron 45.0%
! TCAAAGGACTTTGGAGGAGA+GGG - chr3_1:94409243-94409262 Msa0389540:intron 45.0%
AGTAGGTCCTAATTTGGAGG+AGG - chr3_1:94409267-94409286 Msa0389540:intron 45.0%
GTAGGTCCTAATTTGGAGGA+GGG - chr3_1:94409268-94409287 Msa0389540:intron 45.0%
CTAAAGCCCTCCTCCAAATT+AGG + chr3_1:94409277-94409296 None:intergenic 45.0%
! AATTTGGAGGAGGGCTTTAG+AGG - chr3_1:94409277-94409296 Msa0389540:intron 45.0%
AGGCTCACCAAAAATCTCCA+AGG - chr3_1:94409362-94409381 Msa0389540:intron 45.0%
GGCTCACCAAAAATCTCCAA+GGG - chr3_1:94409363-94409382 Msa0389540:intron 45.0%
ACCAAAAATCTCCAAGGGCT+AGG - chr3_1:94409368-94409387 Msa0389540:intron 45.0%
! ACCTAGCCCTTGGAGATTTT+TGG + chr3_1:94409372-94409391 None:intergenic 45.0%
AGCAACTAATAGGTGGGAAG+GGG + chr3_1:94409501-94409520 None:intergenic 45.0%
TGGTCCGTATCACAAATACG+AGG + chr3_1:94410019-94410038 None:intergenic 45.0%
GAGGGAGCTCAAGAAATAAG+TGG + chr3_1:94410039-94410058 None:intergenic 45.0%
CATCAATGAGATGTCTGTGG+TGG - chr3_1:94410084-94410103 Msa0389540:intron 45.0%
GCATTACCAGAGATCTGAAG+TGG - chr3_1:94410173-94410192 Msa0389540:intron 45.0%
! TTACCAGAGATCTGAAGTGG+GGG - chr3_1:94410176-94410195 Msa0389540:intron 45.0%
!! GTTTGGTTTGATGCTCCGAT+TGG - chr3_1:94410321-94410340 Msa0389540:intron 45.0%
ACACACGTGATTGGGAGAAA+TGG - chr3_1:94410367-94410386 Msa0389540:intron 45.0%
GTGGAAAAACCCTGAGAATG+TGG - chr3_1:94410389-94410408 Msa0389540:intron 45.0%
TGGTGTCTGACTACAGAACT+GGG + chr3_1:94410626-94410645 None:intergenic 45.0%
! TTGGTGTCTGACTACAGAAC+TGG + chr3_1:94410627-94410646 None:intergenic 45.0%
ATTGCGTCGTTGTTGCATCA+TGG - chr3_1:94410747-94410766 Msa0389540:intron 45.0%
AACGGACGATACAGAACAAC+TGG + chr3_1:94410981-94411000 None:intergenic 45.0%
TTTCCACCATTACCGATCAG+CGG - chr3_1:94411008-94411027 Msa0389540:intron 45.0%
AACAACTGGAAACCGCTGAT+CGG + chr3_1:94411023-94411042 None:intergenic 45.0%
ATATAGGGGAGTGAACGAAG+AGG + chr3_1:94411085-94411104 None:intergenic 45.0%
CATGACTCTTTGCAGCTATC+CGG - chr3_1:94411359-94411378 Msa0389540:intron 45.0%
ATGACTCTTTGCAGCTATCC+GGG - chr3_1:94411360-94411379 Msa0389540:intron 45.0%
GATCTCACCTAAGATCGTTC+GGG - chr3_1:94411504-94411523 Msa0389540:intron 45.0%
! AGTCGGGCAACGAATTTTCA+CGG - chr3_1:94411876-94411895 Msa0389540:intron 45.0%
GGCATAGAAGAAGAGAGAGA+CGG + chr3_1:94411996-94412015 None:intergenic 45.0%
! GTAGTGTGGGTTGAGCAAAA+AGG + chr3_1:94412072-94412091 None:intergenic 45.0%
GGAAGAAGGAGAAGTAGTGT+GGG + chr3_1:94412085-94412104 None:intergenic 45.0%
GGAGGAAATTCGATCGGAAA+GGG - chr3_1:94412282-94412301 Msa0389540:intron 45.0%
GAGGAAATTCGATCGGAAAG+GGG - chr3_1:94412283-94412302 Msa0389540:intron 45.0%
! CTGTTGGTACTGCTTTGTTG+TGG - chr3_1:94412313-94412332 Msa0389540:intron 45.0%
TCGTTGACCTGCTAATTGCT+TGG + chr3_1:94412615-94412634 None:intergenic 45.0%
GAAAAAAGCTTGCAGGAGGT+GGG - chr3_1:94412691-94412710 Msa0389540:intron 45.0%
!!! CGGCGCTTTTTTGTGAATCT+GGG + chr3_1:94412769-94412788 None:intergenic 45.0%
!!! TCGGCGCTTTTTTGTGAATC+TGG + chr3_1:94412770-94412789 None:intergenic 45.0%
!! TTCACAAAAAAGCGCCGATC+CGG - chr3_1:94412772-94412791 Msa0389540:intron 45.0%
TTGAAGATCGAAAACGACGG+CGG + chr3_1:94412832-94412851 None:intergenic 45.0%
GGGTTGAAGATCGAAAACGA+CGG + chr3_1:94412835-94412854 None:intergenic 45.0%
ATCGCAAGATCGTACGATCT+TGG - chr3_1:94412881-94412900 Msa0389540:intron 45.0%
TCGCAAGATCGTACGATCTT+GGG - chr3_1:94412882-94412901 Msa0389540:intron 45.0%
TAGCATGCTAAGAAACTGGC+TGG + chr3_1:94413150-94413169 None:intergenic 45.0%
GAGTTGTGTAAGGTCCATTG+TGG - chr3_1:94413411-94413430 Msa0389540:intron 45.0%
AGGCTATATCACACTCAACG+TGG - chr3_1:94413706-94413725 Msa0389540:intron 45.0%
GGCTATATCACACTCAACGT+GGG - chr3_1:94413707-94413726 Msa0389540:intron 45.0%
CCAGTTCCAAGTAGAGTAGA+TGG + chr3_1:94414124-94414143 None:intergenic 45.0%
CCATCTACTCTACTTGGAAC+TGG - chr3_1:94414121-94414140 Msa0389540:intron 45.0%
!! TTTCGAAGAGTAAAGGCGTC+GGG - chr3_1:94414734-94414753 Msa0389540:intron 45.0%
CTTGCTAACAAATAGGCCTG+AGG - chr3_1:94414813-94414832 Msa0389540:intron 45.0%
TTATTGCCAAACCTGCAGGT+TGG - chr3_1:94415035-94415054 Msa0389540:intron 45.0%
AAAGAGCTAAACCAACCTGC+AGG + chr3_1:94415049-94415068 None:intergenic 45.0%
!! TGCAGGTTGGTTTAGCTCTT+TGG - chr3_1:94415048-94415067 Msa0389540:intron 45.0%
!! ACTAAGTTGCATCGGCTACA+TGG + chr3_1:94415621-94415640 None:intergenic 45.0%
ATGTAGCCGATGCAACTTAG+TGG - chr3_1:94415620-94415639 Msa0389540:intron 45.0%
TGTAGCCGATGCAACTTAGT+GGG - chr3_1:94415621-94415640 Msa0389540:intron 45.0%
CGATGCAACTTAGTGGGATA+AGG - chr3_1:94415627-94415646 Msa0389540:intron 45.0%
! GTTCTAGATGACAGTGACAG+TGG - chr3_1:94415786-94415805 Msa0389540:intron 45.0%
TAGATGACAGTGACAGTGGA+GGG - chr3_1:94415790-94415809 Msa0389540:intron 45.0%
TTAGGCTGCGACAGTGATAT+AGG - chr3_1:94415855-94415874 Msa0389540:intron 45.0%
TAGGCTGCGACAGTGATATA+GGG - chr3_1:94415856-94415875 Msa0389540:intron 45.0%
! ATTGCCATAACAATGGTGGG+AGG - chr3_1:94415912-94415931 Msa0389540:intron 45.0%
! TTGCCATAACAATGGTGGGA+GGG - chr3_1:94415913-94415932 Msa0389540:intron 45.0%
TACCACCTCCATTATCCTTG+CGG + chr3_1:94415964-94415983 None:intergenic 45.0%
! GTGGTAATGACAATGGTGGA+GGG - chr3_1:94415978-94415997 Msa0389540:intron 45.0%
TGCAATGAGCATATCTGGTG+AGG - chr3_1:94416306-94416325 Msa0389540:intron 45.0%
GCAATGAGCATATCTGGTGA+GGG - chr3_1:94416307-94416326 Msa0389540:intron 45.0%
CAATGAGCATATCTGGTGAG+GGG - chr3_1:94416308-94416327 Msa0389540:intron 45.0%
TGAGGGGAATGCATATTTGC+AGG - chr3_1:94416324-94416343 Msa0389540:intron 45.0%
TAACAAGGGAGCAGAGAGAT+TGG + chr3_1:94416488-94416507 None:intergenic 45.0%
! CGGCAGCAGTTTTCATAACA+AGG + chr3_1:94416503-94416522 None:intergenic 45.0%
!!! GGAGGTTTTGGAGTTAGAGA+GGG - chr3_1:94416715-94416734 Msa0389540:intron 45.0%
GAGAGAAAACTCTCCTCCAA+GGG + chr3_1:94416827-94416846 None:intergenic 45.0%
!! TTCTCTGTTTTCTGGCACGA+AGG - chr3_1:94416931-94416950 Msa0389540:CDS 45.0%
GAACACCAAAGCCATTGTTC+AGG - chr3_1:94417068-94417087 Msa0389540:intron 45.0%
TTGAAGGAAGTCAAGCTGAC+AGG - chr3_1:94417218-94417237 Msa0389540:intron 45.0%
TGAAGGAAGTCAAGCTGACA+GGG - chr3_1:94417219-94417238 Msa0389540:intron 45.0%
GCCAGTTGTCACATTCTTTG+AGG + chr3_1:94417503-94417522 None:intergenic 45.0%
TTGCGGTTAAAGTGGAGTAC+TGG + chr3_1:94417576-94417595 None:intergenic 45.0%
GCAATGCATTGCGGTTAAAG+TGG + chr3_1:94417584-94417603 None:intergenic 45.0%
TCAAAATCCTGGACGGTTGT+TGG - chr3_1:94417760-94417779 Msa0389540:intron 45.0%
CATAATACCAACAACCGTCC+AGG + chr3_1:94417770-94417789 None:intergenic 45.0%
CTGGACGGTTGTTGGTATTA+TGG - chr3_1:94417768-94417787 Msa0389540:intron 45.0%
!!! CTTGATGATGCTTTTGCTGC+TGG + chr3_1:94418083-94418102 None:intergenic 45.0%
!! GCAGCAAAAGCATCATCAAG+TGG - chr3_1:94418083-94418102 Msa0389540:intron 45.0%
!!! TTCAGCAGCAGCCTTGTTTT+TGG + chr3_1:94418111-94418130 None:intergenic 45.0%
CTTGACAAGTCCACTGACAA+CGG + chr3_1:94418255-94418274 None:intergenic 45.0%
ACCTAAAACCAGCAACCATG+AGG - chr3_1:94418423-94418442 Msa0389540:intron 45.0%
CCTAAAACCAGCAACCATGA+GGG - chr3_1:94418424-94418443 Msa0389540:intron 45.0%
CTAAAACCAGCAACCATGAG+GGG - chr3_1:94418425-94418444 Msa0389540:intron 45.0%
AGCAGCAAGAACCATTGCTT+GGG + chr3_1:94418459-94418478 None:intergenic 45.0%
AAGCAGCAAGAACCATTGCT+TGG + chr3_1:94418460-94418479 None:intergenic 45.0%
TTCCAATGCTGATCACACCA+TGG - chr3_1:94418478-94418497 Msa0389540:intron 45.0%
TACCATGGTGTGATCAGCAT+TGG + chr3_1:94418483-94418502 None:intergenic 45.0%
ATGCTGATCACACCATGGTA+AGG - chr3_1:94418483-94418502 Msa0389540:intron 45.0%
ATCCAACCCCCTAGTTGTAA+GGG + chr3_1:94418527-94418546 None:intergenic 45.0%
AGGTGAAGTGTGTTTGCTTG+TGG - chr3_1:94418656-94418675 Msa0389540:intron 45.0%
CAGAAGCTAGGGGAAAATCT+GGG + chr3_1:94418925-94418944 None:intergenic 45.0%
TCAGAAGCTAGGGGAAAATC+TGG + chr3_1:94418926-94418945 None:intergenic 45.0%
TTTCCCCTAGCTTCTGAATG+TGG - chr3_1:94418929-94418948 Msa0389540:intron 45.0%
!! GATGAGAGAAAGCACTCCAA+AGG + chr3_1:94419078-94419097 None:intergenic 45.0%
!! TGTGCACCTTTAGGTTGAGT+TGG - chr3_1:94419143-94419162 Msa0389540:intron 45.0%
TCTCCAACAAGAGCAGAACT+GGG + chr3_1:94419177-94419196 None:intergenic 45.0%
TTCTCCAACAAGAGCAGAAC+TGG + chr3_1:94419178-94419197 None:intergenic 45.0%
GGAGAAAGAATCACATTCCC+GGG - chr3_1:94419192-94419211 Msa0389540:intron 45.0%
GAGAAAGAATCACATTCCCG+GGG - chr3_1:94419193-94419212 Msa0389540:intron 45.0%
ATTTGCACGGTTCCATCCAT+AGG - chr3_1:94419345-94419364 Msa0389540:CDS 45.0%
! GATGGTAACAAGTTGGCACT+TGG + chr3_1:94419581-94419600 None:intergenic 45.0%
GGTGGTAGATATAGATGAGG+GGG + chr3_1:94419756-94419775 None:intergenic 45.0%
GGGTGGTAGATATAGATGAG+GGG + chr3_1:94419757-94419776 None:intergenic 45.0%
GAGGGTGGTAGATATAGATG+AGG + chr3_1:94419759-94419778 None:intergenic 45.0%
!! GATAAAAATATAAATAAATT+AGG + chr3_1:94410821-94410840 None:intergenic 5.0%
!! ATTAAATATAAGATTTATTA+AGG - chr3_1:94411737-94411756 Msa0389540:intron 5.0%
!!! ATTTTTAATTTATTTTTTAG+AGG + chr3_1:94412558-94412577 None:intergenic 5.0%
!!! AAAATGTATTTTTTTTTTAA+CGG - chr3_1:94417425-94417444 Msa0389540:intron 5.0%
CAACGCACTCGGGTAAGATT+AGG + chr3_1:94407115-94407134 None:intergenic 50.0%
AATCTTACCCGAGTGCGTTG+CGG - chr3_1:94407115-94407134 Msa0389540:intron 50.0%
! GAGGGTATGAATGAGGGTGT+GGG + chr3_1:94407171-94407190 None:intergenic 50.0%
! GTGAGCGAGGGTATGAATGA+GGG + chr3_1:94407177-94407196 None:intergenic 50.0%
! TGTGAGCGAGGGTATGAATG+AGG + chr3_1:94407178-94407197 None:intergenic 50.0%
!! TCTCGCTATTGCTTTTGCGG+CGG - chr3_1:94407219-94407238 Msa0389540:intron 50.0%
ACGTTGCGCTTTCCTTCAAC+GGG + chr3_1:94407325-94407344 None:intergenic 50.0%
GACGTTGCGCTTTCCTTCAA+CGG + chr3_1:94407326-94407345 None:intergenic 50.0%
CCAATGATGTTGCCGAGATG+AGG + chr3_1:94407385-94407404 None:intergenic 50.0%
CCTCATCTCGGCAACATCAT+TGG - chr3_1:94407382-94407401 Msa0389540:intron 50.0%
ACGATCAGGTGTGTTGAGTG+CGG - chr3_1:94407529-94407548 Msa0389540:three_prime_UTR 50.0%
!! ATCTGCGGTACCGATGAGTA+TGG - chr3_1:94407599-94407618 Msa0389540:three_prime_UTR 50.0%
!! TCTGCGGTACCGATGAGTAT+GGG - chr3_1:94407600-94407619 Msa0389540:three_prime_UTR 50.0%
CGTTGCAGTCCCATACTCAT+CGG + chr3_1:94407612-94407631 None:intergenic 50.0%
CGATGAGTATGGGACTGCAA+CGG - chr3_1:94407610-94407629 Msa0389540:exon 50.0%
GGAATAACCCAGTGCCAAAC+AGG + chr3_1:94408562-94408581 None:intergenic 50.0%
! GCACACTTCAGTTTGCTCAG+GGG + chr3_1:94408700-94408719 None:intergenic 50.0%
! GGCACACTTCAGTTTGCTCA+GGG + chr3_1:94408701-94408720 None:intergenic 50.0%
! TGGCACACTTCAGTTTGCTC+AGG + chr3_1:94408702-94408721 None:intergenic 50.0%
! CTCTGAGGACACATTACAGC+AGG - chr3_1:94408758-94408777 Msa0389540:CDS 50.0%
!! GTTCTTAGCCGATCGACTTG+TGG - chr3_1:94408966-94408985 Msa0389540:intron 50.0%
!! TTAGCCGATCGACTTGTGGA+GGG - chr3_1:94408970-94408989 Msa0389540:intron 50.0%
GCAGAATCATACTCACACCC+TGG + chr3_1:94409009-94409028 None:intergenic 50.0%
TGAGAGTAGGGAGGGATCAA+AGG - chr3_1:94409227-94409246 Msa0389540:intron 50.0%
AGGGAGGGATCAAAGGACTT+TGG - chr3_1:94409234-94409253 Msa0389540:intron 50.0%
GAGGGATCAAAGGACTTTGG+AGG - chr3_1:94409237-94409256 Msa0389540:intron 50.0%
! CAAAGGACTTTGGAGGAGAG+GGG - chr3_1:94409244-94409263 Msa0389540:intron 50.0%
GAGGGGAGTAGGTCCTAATT+TGG - chr3_1:94409261-94409280 Msa0389540:intron 50.0%
GGGAGTAGGTCCTAATTTGG+AGG - chr3_1:94409264-94409283 Msa0389540:intron 50.0%
!!! AAGGGGGTTTTAGAGGGTAG+GGG + chr3_1:94409484-94409503 None:intergenic 50.0%
!!! GAAGGGGGTTTTAGAGGGTA+GGG + chr3_1:94409485-94409504 None:intergenic 50.0%
GCAACTAATAGGTGGGAAGG+GGG + chr3_1:94409500-94409519 None:intergenic 50.0%
! AGATGTCTGTGGTGGGATCA+TGG - chr3_1:94410092-94410111 Msa0389540:intron 50.0%
! TACCAGAGATCTGAAGTGGG+GGG - chr3_1:94410177-94410196 Msa0389540:intron 50.0%
CACGTGATTGGGAGAAATGG+TGG - chr3_1:94410370-94410389 Msa0389540:intron 50.0%
CATTGGGCTTGAGCTCATGA+CGG + chr3_1:94410942-94410961 None:intergenic 50.0%
! AAACCGCTGATCGGTAATGG+TGG + chr3_1:94411014-94411033 None:intergenic 50.0%
TGGAAACCGCTGATCGGTAA+TGG + chr3_1:94411017-94411036 None:intergenic 50.0%
AGTATACTCTCACCAGCCCA+TGG - chr3_1:94411468-94411487 Msa0389540:intron 50.0%
!! CGATTTTGACAACCATGGGC+TGG + chr3_1:94411483-94411502 None:intergenic 50.0%
! ATGCTGTTTGGTACGGGAGT+CGG - chr3_1:94411859-94411878 Msa0389540:intron 50.0%
GTTCAGAAACTGCCAACACG+TGG + chr3_1:94411923-94411942 None:intergenic 50.0%
GGGAAGAAGGAGAAGTAGTG+TGG + chr3_1:94412086-94412105 None:intergenic 50.0%
TGTTGAATGATGAGGGAGGG+AGG - chr3_1:94412243-94412262 Msa0389540:CDS 50.0%
AGTGGGGGAGGAAATTCGAT+CGG - chr3_1:94412276-94412295 Msa0389540:intron 50.0%
GGGAGGAAATTCGATCGGAA+AGG - chr3_1:94412281-94412300 Msa0389540:intron 50.0%
TTCGATCGGAAAGGGGAAAG+AGG - chr3_1:94412290-94412309 Msa0389540:intron 50.0%
GTTTGAATGATGAGGGAGGG+AGG - chr3_1:94412341-94412360 Msa0389540:intron 50.0%
AATGATGAGGGAGGGAGGAA+GGG - chr3_1:94412248-94412267 Msa0389540:CDS 50.0%
GGAAAAAAGCTTGCAGGAGG+TGG - chr3_1:94412690-94412709 Msa0389540:intron 50.0%
GAGGTGGGTCAAAACAGGAT+CGG - chr3_1:94412706-94412725 Msa0389540:intron 50.0%
AGGTGGGTCAAAACAGGATC+GGG - chr3_1:94412707-94412726 Msa0389540:intron 50.0%
GGTCAAAACAGGATCGGGTT+GGG - chr3_1:94412712-94412731 Msa0389540:intron 50.0%
! ATCTGGGAAGGCTTTTGACC+CGG + chr3_1:94412753-94412772 None:intergenic 50.0%
ATCTTCAACCCGCTCCAGAT+CGG - chr3_1:94412844-94412863 Msa0389540:intron 50.0%
GTACGATCTTGCGATTCCGA+TGG + chr3_1:94412876-94412895 None:intergenic 50.0%
GGAGTAGATAGGATGGTGCA+AGG + chr3_1:94412930-94412949 None:intergenic 50.0%
ACCATCCTATCTACTCCCTC+CGG - chr3_1:94412933-94412952 Msa0389540:intron 50.0%
TTAGACCGGAGGGAGTAGAT+AGG + chr3_1:94412941-94412960 None:intergenic 50.0%
AATGCAACAGTGGCTGAGGA+AGG + chr3_1:94413173-94413192 None:intergenic 50.0%
GGGATGAACACCTGTTGATC+AGG + chr3_1:94413902-94413921 None:intergenic 50.0%
!! TTCGAAGAGTAAAGGCGTCG+GGG - chr3_1:94414735-94414754 Msa0389540:intron 50.0%
!! AGTAAAGGCGTCGGGGTATT+TGG - chr3_1:94414742-94414761 Msa0389540:intron 50.0%
GCTAAACCAACCTGCAGGTT+TGG + chr3_1:94415044-94415063 None:intergenic 50.0%
GAGTCGCCACTTACATCATC+AGG + chr3_1:94415336-94415355 None:intergenic 50.0%
! TGGAGCGTTCTTGCTGATGA+TGG - chr3_1:94415740-94415759 Msa0389540:intron 50.0%
!! AGCGTTCTTGCTGATGATGG+TGG - chr3_1:94415743-94415762 Msa0389540:intron 50.0%
!! GTTCTTGCTGATGATGGTGG+TGG - chr3_1:94415746-94415765 Msa0389540:intron 50.0%
CTAGATGACAGTGACAGTGG+AGG - chr3_1:94415789-94415808 Msa0389540:intron 50.0%
!! TGGAGGGTGTCAAACTGCAA+GGG - chr3_1:94415806-94415825 Msa0389540:intron 50.0%
GCCTAATAACCTCCACTGCT+CGG + chr3_1:94415841-94415860 None:intergenic 50.0%
AGTCCCTCCCACCATTGTTA+TGG + chr3_1:94415919-94415938 None:intergenic 50.0%
! ATAACAATGGTGGGAGGGAC+TGG - chr3_1:94415918-94415937 Msa0389540:intron 50.0%
GAGGTTGTCCGCAAGGATAA+TGG - chr3_1:94415953-94415972 Msa0389540:intron 50.0%
! GTTGTCCGCAAGGATAATGG+AGG - chr3_1:94415956-94415975 Msa0389540:intron 50.0%
! GGAGGTGGTAATGACAATGG+TGG - chr3_1:94415974-94415993 Msa0389540:intron 50.0%
! GGTGGTAATGACAATGGTGG+AGG - chr3_1:94415977-94415996 Msa0389540:intron 50.0%
! GTAATGACAATGGTGGAGGG+TGG - chr3_1:94415981-94416000 Msa0389540:intron 50.0%
TGGCAGTGAATAGTGTCAGG+TGG - chr3_1:94416001-94416020 Msa0389540:intron 50.0%
CAGTGAATAGTGTCAGGTGG+CGG - chr3_1:94416004-94416023 Msa0389540:intron 50.0%
! TATGAGTTGAGGAGTTGGGC+AGG - chr3_1:94416672-94416691 Msa0389540:CDS 50.0%
! ATGAGTTGAGGAGTTGGGCA+GGG - chr3_1:94416673-94416692 Msa0389540:CDS 50.0%
!!! GGGAGGTTTTGGAGTTAGAG+AGG - chr3_1:94416714-94416733 Msa0389540:intron 50.0%
ATTCTACAAGGGGGAACCCT+TGG - chr3_1:94416808-94416827 Msa0389540:CDS 50.0%
GGAGAGAAAACTCTCCTCCA+AGG + chr3_1:94416828-94416847 None:intergenic 50.0%
AGCTCCCTGAACAATGGCTT+TGG + chr3_1:94417076-94417095 None:intergenic 50.0%
AAAGCCATTGTTCAGGGAGC+TGG - chr3_1:94417075-94417094 Msa0389540:intron 50.0%
CATACCAGCTCCCTGAACAA+TGG + chr3_1:94417082-94417101 None:intergenic 50.0%
TTGTTCAGGGAGCTGGTATG+TGG - chr3_1:94417082-94417101 Msa0389540:intron 50.0%
! GGGCTGTTGTTTGCAACAGA+TGG - chr3_1:94418041-94418060 Msa0389540:CDS 50.0%
CAGACAAGAACCGTTGTCAG+TGG - chr3_1:94418242-94418261 Msa0389540:CDS 50.0%
!!! CCCTCATGGTTGCTGGTTTT+AGG + chr3_1:94418427-94418446 None:intergenic 50.0%
TTGGGATTTGATGCCCCTCA+TGG + chr3_1:94418441-94418460 None:intergenic 50.0%
GGGCATCAAATCCCAAGCAA+TGG - chr3_1:94418445-94418464 Msa0389540:intron 50.0%
TTCCCTTACAACTAGGGGGT+TGG - chr3_1:94418522-94418541 Msa0389540:intron 50.0%
GATCCAACCCCCTAGTTGTA+AGG + chr3_1:94418528-94418547 None:intergenic 50.0%
CTGGGCCCTACTAACCTATA+TGG + chr3_1:94418842-94418861 None:intergenic 50.0%
TATATTGGCAGTGCATGCGC+CGG - chr3_1:94418990-94419009 Msa0389540:intron 50.0%
ATCACATTCCCGGGGTATGA+AGG - chr3_1:94419201-94419220 Msa0389540:intron 50.0%
TCTGGATTGCCTTCATACCC+CGG + chr3_1:94419213-94419232 None:intergenic 50.0%
GCACACGAATGAGAAGCTAG+AGG - chr3_1:94419284-94419303 Msa0389540:intron 50.0%
ATTCCACTGACCACATCAGC+TGG - chr3_1:94419321-94419340 Msa0389540:intron 50.0%
CACATCAGCTGGCATTTGCA+CGG - chr3_1:94419332-94419351 Msa0389540:CDS 50.0%
ACGGTTCCATCCATAGGCAA+TGG - chr3_1:94419351-94419370 Msa0389540:CDS 50.0%
CGGTTCCATCCATAGGCAAT+GGG - chr3_1:94419352-94419371 Msa0389540:CDS 50.0%
ATCGTCCCATTGCCTATGGA+TGG + chr3_1:94419360-94419379 None:intergenic 50.0%
CCATAGGCAATGGGACGATA+CGG - chr3_1:94419361-94419380 Msa0389540:CDS 50.0%
! CGAGGGTATGAATGAGGGTG+TGG + chr3_1:94407172-94407191 None:intergenic 55.0%
!! CTTAGCCGATCGACTTGTGG+AGG - chr3_1:94408969-94408988 Msa0389540:intron 55.0%
GGTACCCTCCACAAGTCGAT+CGG + chr3_1:94408977-94408996 None:intergenic 55.0%
! AGGGTACCTGCCCAATTCCA+GGG - chr3_1:94408989-94409008 Msa0389540:intron 55.0%
GTTCTCACACTGATCCCCTC+TGG + chr3_1:94409031-94409050 None:intergenic 55.0%
GGGGATCAGTGTGAGAACTG+TGG - chr3_1:94409033-94409052 Msa0389540:intron 55.0%
! ACTTTGGAGGAGAGGGGAGT+AGG - chr3_1:94409250-94409269 Msa0389540:intron 55.0%
!!! GGAAGGGGGTTTTAGAGGGT+AGG + chr3_1:94409486-94409505 None:intergenic 55.0%
!!! GGTGGGAAGGGGGTTTTAGA+GGG + chr3_1:94409490-94409509 None:intergenic 55.0%
!! AGGTGGGAAGGGGGTTTTAG+AGG + chr3_1:94409491-94409510 None:intergenic 55.0%
AACCCCCCACTTCAGATCTC+TGG + chr3_1:94410182-94410201 None:intergenic 55.0%
GGCAGGCTACACACGTGATT+GGG - chr3_1:94410359-94410378 Msa0389540:intron 55.0%
GCGTCGTTGTTGCATCATGG+AGG - chr3_1:94410750-94410769 Msa0389540:intron 55.0%
! TGCTGTTTGGTACGGGAGTC+GGG - chr3_1:94411860-94411879 Msa0389540:intron 55.0%
GAATGATGAGGGAGGGAGGA+AGG - chr3_1:94412247-94412266 Msa0389540:CDS 55.0%
! AGGGAGGAAGGTGTGGTAGT+GGG - chr3_1:94412259-94412278 Msa0389540:CDS 55.0%
GGAAAGGGGAAAGAGGCTGT+TGG - chr3_1:94412297-94412316 Msa0389540:intron 55.0%
GAATGATGAGGGAGGGAGGA+AGG - chr3_1:94412247-94412266 Msa0389540:CDS 55.0%
TGCAGGAGGTGGGTCAAAAC+AGG - chr3_1:94412701-94412720 Msa0389540:intron 55.0%
GGGTCAAAACAGGATCGGGT+TGG - chr3_1:94412711-94412730 Msa0389540:intron 55.0%
TGGGTCACTCGTTTCCGAAC+CGG - chr3_1:94412731-94412750 Msa0389540:intron 55.0%
! GGAAGGCTTTTGACCCGGTT+CGG + chr3_1:94412748-94412767 None:intergenic 55.0%
! AAAGCGGTGGTTTGCCGGAT+CGG + chr3_1:94412789-94412808 None:intergenic 55.0%
! GAGGAAAAGCGGTGGTTTGC+CGG + chr3_1:94412794-94412813 None:intergenic 55.0%
!! GGCAAACCACCGCTTTTCCT+CGG - chr3_1:94412793-94412812 Msa0389540:intron 55.0%
ATCGAAAACGACGGCGGATC+GGG + chr3_1:94412826-94412845 None:intergenic 55.0%
GATCGAAAACGACGGCGGAT+CGG + chr3_1:94412827-94412846 None:intergenic 55.0%
ACCGGAGGGAGTAGATAGGA+TGG + chr3_1:94412937-94412956 None:intergenic 55.0%
CAGGTGTTCATCCCATGCTC+TGG - chr3_1:94413908-94413927 Msa0389540:intron 55.0%
!! CTTGCTGATGATGGTGGTGG+CGG - chr3_1:94415749-94415768 Msa0389540:intron 55.0%
!! GTGGAGGGTGTCAAACTGCA+AGG - chr3_1:94415805-94415824 Msa0389540:intron 55.0%
TGAAAGATGCCGAGCAGTGG+AGG - chr3_1:94415829-94415848 Msa0389540:intron 55.0%
GCCGAGCAGTGGAGGTTATT+AGG - chr3_1:94415837-94415856 Msa0389540:intron 55.0%
!! GTCCGCAAGGATAATGGAGG+TGG - chr3_1:94415959-94415978 Msa0389540:intron 55.0%
GGGTGGCAGTGAATAGTGTC+AGG - chr3_1:94415998-94416017 Msa0389540:intron 55.0%
GGCTTTCGTGTGGAAGTGAG+TGG - chr3_1:94416025-94416044 Msa0389540:intron 55.0%
CGGGGGAAGGGCCAAAAATA+GGG + chr3_1:94416371-94416390 None:intergenic 55.0%
TCGGGGGAAGGGCCAAAAAT+AGG + chr3_1:94416372-94416391 None:intergenic 55.0%
CCGGCACTTACAAGATCCCA+GGG + chr3_1:94417037-94417056 None:intergenic 55.0%
CCCTGGGATCTTGTAAGTGC+CGG - chr3_1:94417034-94417053 Msa0389540:intron 55.0%
ACCGGCACTTACAAGATCCC+AGG + chr3_1:94417038-94417057 None:intergenic 55.0%
TGACAGGGTTGTTCGTGCAG+AGG - chr3_1:94417234-94417253 Msa0389540:intron 55.0%
TTGATGCCCCTCATGGTTGC+TGG + chr3_1:94418434-94418453 None:intergenic 55.0%
GGTTAGTAGGGCCCAGAATC+AGG - chr3_1:94418846-94418865 Msa0389540:intron 55.0%
ATATTGGCAGTGCATGCGCC+GGG - chr3_1:94418991-94419010 Msa0389540:intron 55.0%
TATGACCACACATGTGCGCC+CGG + chr3_1:94419012-94419031 None:intergenic 55.0%
CCAACAAGAGCAGAACTGGG+CGG + chr3_1:94419174-94419193 None:intergenic 55.0%
CTGGATTGCCTTCATACCCC+GGG + chr3_1:94419212-94419231 None:intergenic 55.0%
ATGCCAGCTGATGTGGTCAG+TGG + chr3_1:94419327-94419346 None:intergenic 55.0%
CGTGCAAATGCCAGCTGATG+TGG + chr3_1:94419334-94419353 None:intergenic 55.0%
CCGTATCGTCCCATTGCCTA+TGG + chr3_1:94419364-94419383 None:intergenic 55.0%
!! AGGGGAGAGCGCTAGTGATG+AGG + chr3_1:94407348-94407367 None:intergenic 60.0%
!! GAGGGTACCTGCCCAATTCC+AGG - chr3_1:94408988-94409007 Msa0389540:intron 60.0%
CTCACACCCTGGAATTGGGC+AGG + chr3_1:94408998-94409017 None:intergenic 60.0%
!!! GGGGTTTTAGAGGGTAGGGG+AGG + chr3_1:94409481-94409500 None:intergenic 60.0%
CGGCAGGCTACACACGTGAT+TGG - chr3_1:94410358-94410377 Msa0389540:intron 60.0%
ATGAGGGAGGGAGGAAGGTG+TGG - chr3_1:94412252-94412271 Msa0389540:CDS 60.0%
! GAGGGAGGAAGGTGTGGTAG+TGG - chr3_1:94412258-94412277 Msa0389540:CDS 60.0%
! GGGAGGAAGGTGTGGTAGTG+GGG - chr3_1:94412260-94412279 Msa0389540:CDS 60.0%
!! GGAGGAAGGTGTGGTAGTGG+GGG - chr3_1:94412261-94412280 Msa0389540:CDS 60.0%
ATGAGGGAGGGAGGAAGGGA+AGG - chr3_1:94412350-94412369 Msa0389540:intron 60.0%
GGGTCACTCGTTTCCGAACC+GGG - chr3_1:94412732-94412751 Msa0389540:intron 60.0%
TTCAACCCGCTCCAGATCGG+TGG - chr3_1:94412847-94412866 Msa0389540:intron 60.0%
!! TGATGATGGTGGTGGCGGCA+TGG - chr3_1:94415754-94415773 Msa0389540:intron 60.0%
GGGTGAAAGATGCCGAGCAG+TGG - chr3_1:94415826-94415845 Msa0389540:intron 60.0%
TTGCGGACAACCTCAACCCG+TGG + chr3_1:94415947-94415966 None:intergenic 60.0%
! ACGGGTTGAGGTTGTCCGCA+AGG - chr3_1:94415946-94415965 Msa0389540:intron 60.0%
CTACAAGGGGGAACCCTTGG+AGG - chr3_1:94416811-94416830 Msa0389540:CDS 60.0%
CCGCCCAGTTCTGCTCTTGT+TGG - chr3_1:94419171-94419190 Msa0389540:intron 60.0%
ACACGCAGCCGCAACGCACT+CGG + chr3_1:94407126-94407145 None:intergenic 65.0%
GCGGAGCCTCTTCATCTCGC+CGG - chr3_1:94407238-94407257 Msa0389540:intron 65.0%
CGGTCACCGGCGAGATGAAG+AGG + chr3_1:94407247-94407266 None:intergenic 65.0%
GCGCCGAAGCTTCCCGTTGA+AGG - chr3_1:94407310-94407329 Msa0389540:intron 65.0%
!! GGAAGGTGTGGTAGTGGGGG+AGG - chr3_1:94412264-94412283 Msa0389540:CDS 65.0%
AGGGAGGGAGGAAGGGAAGG+TGG - chr3_1:94412353-94412372 Msa0389540:intron 65.0%
GGGAGGAAGGGAAGGTGGTG+TGG - chr3_1:94412358-94412377 Msa0389540:intron 65.0%
GAAAACGACGGCGGATCGGG+CGG + chr3_1:94412823-94412842 None:intergenic 65.0%
AACCCGCTCCAGATCGGTGG+CGG - chr3_1:94412850-94412869 Msa0389540:intron 65.0%
! TCCAGATCGGTGGCGGCCAT+CGG - chr3_1:94412857-94412876 Msa0389540:intron 65.0%
!! TGGTGGCGGCATGGCAGCAA+AGG - chr3_1:94415763-94415782 Msa0389540:intron 65.0%
! GGTGGCGGCATGGCAGCAAA+GGG - chr3_1:94415764-94415783 Msa0389540:intron 65.0%
!! GTGGGAGGGACTGGCTTCCA+CGG - chr3_1:94415927-94415946 Msa0389540:intron 65.0%
!! TGGGAGGGACTGGCTTCCAC+GGG - chr3_1:94415928-94415947 Msa0389540:intron 65.0%
!! GGACTGGCTTCCACGGGTTG+AGG - chr3_1:94415934-94415953 Msa0389540:intron 65.0%
! GTCAGGTGGCGGCTTTCGTG+TGG - chr3_1:94416015-94416034 Msa0389540:intron 65.0%
CACGCAGCCGCAACGCACTC+GGG + chr3_1:94407125-94407144 None:intergenic 70.0%
TGGCCGCCACCGATCTGGAG+CGG + chr3_1:94412856-94412875 None:intergenic 70.0%
TCCGATGGCCGCCACCGATC+TGG + chr3_1:94412861-94412880 None:intergenic 70.0%
ATGCGCCGGGCGCACATGTG+TGG - chr3_1:94419004-94419023 Msa0389540:intron 70.0%
GGCGCGCCGAGGAAAAGCGG+TGG + chr3_1:94412802-94412821 None:intergenic 75.0%
GGCGGCGCGCCGAGGAAAAG+CGG + chr3_1:94412805-94412824 None:intergenic 75.0%
! GGCCGCCACCGATCTGGAGC+GGG + chr3_1:94412855-94412874 None:intergenic 75.0%
! GCGGATCGGGCGGCGCGCCG+AGG + chr3_1:94412813-94412832 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 94406963 94420048 94406963 ID=Msa0389540;Name=Msa0389540
chr3_1 mRNA 94406963 94420048 94406963 ID=Msa0389540-mRNA-1;Parent=Msa0389540;Name=Msa0389540-mRNA-1;_AED=0.12;_eAED=0.12;_QI=262|0.77|0.84|0.94|0.88|0.78|19|291|803
chr3_1 exon 94406963 94407073 94406963 ID=Msa0389540-mRNA-1:exon:26816;Parent=Msa0389540-mRNA-1
chr3_1 exon 94407445 94407855 94407445 ID=Msa0389540-mRNA-1:exon:26815;Parent=Msa0389540-mRNA-1
chr3_1 exon 94408512 94408613 94408512 ID=Msa0389540-mRNA-1:exon:26814;Parent=Msa0389540-mRNA-1
chr3_1 exon 94408713 94408951 94408713 ID=Msa0389540-mRNA-1:exon:26813;Parent=Msa0389540-mRNA-1
chr3_1 exon 94409704 94409827 94409704 ID=Msa0389540-mRNA-1:exon:26812;Parent=Msa0389540-mRNA-1
chr3_1 exon 94409915 94410049 94409915 ID=Msa0389540-mRNA-1:exon:26811;Parent=Msa0389540-mRNA-1
chr3_1 exon 94410430 94410558 94410430 ID=Msa0389540-mRNA-1:exon:26810;Parent=Msa0389540-mRNA-1
chr3_1 exon 94410666 94410764 94410666 ID=Msa0389540-mRNA-1:exon:26809;Parent=Msa0389540-mRNA-1
chr3_1 exon 94411583 94411710 94411583 ID=Msa0389540-mRNA-1:exon:26808;Parent=Msa0389540-mRNA-1
chr3_1 exon 94411959 94412073 94411959 ID=Msa0389540-mRNA-1:exon:26807;Parent=Msa0389540-mRNA-1
chr3_1 exon 94412177 94412283 94412177 ID=Msa0389540-mRNA-1:exon:26806;Parent=Msa0389540-mRNA-1
chr3_1 exon 94414693 94414750 94414693 ID=Msa0389540-mRNA-1:exon:26805;Parent=Msa0389540-mRNA-1
chr3_1 exon 94416556 94416699 94416556 ID=Msa0389540-mRNA-1:exon:26804;Parent=Msa0389540-mRNA-1
chr3_1 exon 94416780 94417010 94416780 ID=Msa0389540-mRNA-1:exon:26803;Parent=Msa0389540-mRNA-1
chr3_1 exon 94417913 94418068 94417913 ID=Msa0389540-mRNA-1:exon:26802;Parent=Msa0389540-mRNA-1
chr3_1 exon 94418232 94418385 94418232 ID=Msa0389540-mRNA-1:exon:26801;Parent=Msa0389540-mRNA-1
chr3_1 exon 94419330 94419474 94419330 ID=Msa0389540-mRNA-1:exon:26800;Parent=Msa0389540-mRNA-1
chr3_1 exon 94419605 94419952 94419605 ID=Msa0389540-mRNA-1:exon:26799;Parent=Msa0389540-mRNA-1
chr3_1 exon 94420020 94420048 94420020 ID=Msa0389540-mRNA-1:exon:26798;Parent=Msa0389540-mRNA-1
chr3_1 five_prime_UTR 94420020 94420048 94420020 ID=Msa0389540-mRNA-1:five_prime_utr;Parent=Msa0389540-mRNA-1
chr3_1 five_prime_UTR 94419720 94419952 94419720 ID=Msa0389540-mRNA-1:five_prime_utr;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94419605 94419719 94419605 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94419330 94419474 94419330 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94418232 94418385 94418232 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94417913 94418068 94417913 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94416780 94417010 94416780 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94416556 94416699 94416556 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94414693 94414750 94414693 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94412177 94412283 94412177 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94411959 94412073 94411959 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94411583 94411710 94411583 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94410666 94410764 94410666 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94410430 94410558 94410430 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94409915 94410049 94409915 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94409704 94409827 94409704 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94408713 94408951 94408713 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94408512 94408613 94408512 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 CDS 94407625 94407855 94407625 ID=Msa0389540-mRNA-1:cds;Parent=Msa0389540-mRNA-1
chr3_1 three_prime_UTR 94407445 94407624 94407445 ID=Msa0389540-mRNA-1:three_prime_utr;Parent=Msa0389540-mRNA-1
chr3_1 three_prime_UTR 94406963 94407073 94406963 ID=Msa0389540-mRNA-1:three_prime_utr;Parent=Msa0389540-mRNA-1
Gene Sequence

>Msa0389540

ATGACGGAAGATCGGAAAGCGCCGAAGCTTCCCGTTGAAGGAAAGCGCAACGTCCTCATCACTAGCGCTCTCCCCTATGTCAACAACGTTCCTCATCTCGGCAACATCATTGGATGTGTGTTGAGTGCGGATGTATTTGCTCGATATTGTCGTCTTAGGGGTTACAATGCGATTTACATCTGCGGTACCGATGAGTATGGGACTGCAACGGAGACTAAAGCATTGGAAGAGAATTGTTCTCCCAAAGAGATTTGTGACAAATACCATGCTATTCACAAGGAGGTCTACGATTGGTTCAATATAAGCTTTGATGAATTTGGACGCACTTCTTCCCCTGAGCAAACTGAAGTGTGCCAAGCAATTTTCAAAAAAGTACACGAAAATAATTGGCTCTCTGAGGACACATTACAGCAGCTTTACTGCGATACATGCAAAAGGTTCTTAGCCGATCGACTTGTGGAGGGTACCTGCCCAATTCCAGGGTGTGAGTATGATTCTGCCAGAGGGGATCAGTGTGAGAACTGTGGCAACCTTCTAAATCCGACAGAATTGAAGATTCCCAAGTGCAAGGTTTGTCGAAATAGTCCTCGTATTTGTGATACGGACCACTTATTTCTTGAGCTCCCTCTTTTGGAAGATAAGTTGCAAAAATACATCAATGAGATGTCTGTGGTGGGATCATGGAGTCAGAATGCTATTCAAACAACAAATTCATGGTTCAAAATGGGATTAAAAAAACGTTGCATTACCAGAGATCTGAAGTGGGGGGTTCCTGTTCCACATGAAAAATACAGTGACAAGGTGTTCTATGTTTGGTTTGATGCTCCGATTGGATATATATCAATCACGGCAGGCTACACACGTGATTGGGAGAAATGGTGGAAAAACCCTGAGAATGTGGAGTTGTTTCAGTTTATGGGAAAGGATAATGTGCCATTCCATACTGGAGGAAGGTGTGGTAGTGGGGGAGGAAATTCGATCGGAAAGGGGAAAGAGGCTGTTGGGAAGTTTTCGAAGAGTAAAGGCGTCGGGGTATTTGGTAATGATGCAAAAGATACTAATATTCCGGTTGAAGTATGGAGATATTACTTGCTAACAAATAGGCCTGAGGTATCAGATACACTTTTTACATGGTCTGACTTGCAAGCAAAATTAAATACCGAGCTTCTGAATAACTTGGGAAACTTTGTCAACCGAGTTTTGAGTTTTATTGCCAAACCTGCAGGTCAAGGATATGATTCCATTATTCCCACTGTTCCTGATGATGTAAGTGGCGACTCCCATGATCCAACCAAAAAATTTGCCAACAAAGTTGCTGCATATATGGAGCAATACATAGAGTCAATGGAGAAGTCTGATATTATTTCTTTTTGCAAAACTGTAAAGGTTAAACTAAAGCAAGGATTGAAAATTGCAATGAGCATATCTGGTGAGGGGAATGCATATTTGCAGGAAACTGAGTTTTGGCGTCTTTACAAGCAAAACCAATCTCTCTGCTCCCTTGTTATGAAAACTGCTGCCGGGATTGTGTATCTTCTTGCTTGTTTGTTGGAACCTTTTATGCCATCTTTCAGTCTTGAGCAACTAAATTTGTCTGTGGACACGCATCTTTCACTTTCTGATGATAAAGGAGACGTTGATAGAGTAAAAAGACCCTGGGATCTTGTAAGTGCCGGTCATAAAATTGGAACACCAAAGCCATTGTTCAGGGAGCTGAAAGATGAAGAAGTAGAAGTCTTCAGGAAGAAGTTTGAAGGAAGTCAAGCTGACAGGGTTGTTCGTGCAGAGGCCGAAGCTGCTGAAAATGTTGCTGAGCAATTGAAGAAAACTAAAGTTTCAGATGGAACTGAGAAGAAAAAACCAGCAGCAAAAGCATCATCAAGTGGAGCCAAAAACAAGGCTGCTGCTGAACCAGAAATTACCATCACAAGGCTTGATATTCGAGTTGGTCTCATAAAGAAGGCTGAAAAGCATCCTGATGCAGATTCACTGTATGTTGAAGAGATTGATGTCGGTGAAGAACAGACAAGAACCGTTGTCAGTGGACTTGTCAAGTATATACCACTTGATGAAATGCAGAATCGAAAGGTCTGTGTTCTTTGCAACCTAAAACCAGCAACCATGAGGGGCATCAAATCCCAAGCAATGGTTCTTGCTGCTTCCAATGCTGATCACACCATGGTTGAGTTGGTTGAACCGCCCAGTTCTGCTCTTGTTGGAGAAAGAATCACATTCCCGGGGTATGAAGGCAATCCAGATGAACTCTTGAATCCAAAGAAGAAAGTTTGGGAGACATTGCAAGCTGATCTGCACACGAATGAGAAGCTAGAGGCATGCTACAAAGACATTCCACTGACCACATCAGCTGGCATTTGCACGGTTCCATCCATAGGCAATGGGACGATACGGTAG
Protein sequence

>Msa0389540

MTEDRKAPKLPVEGKRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKALEENCSPKEICDKYHAIHKEVYDWFNISFDEFGRTSSPEQTEVCQAIFKKVHENNWLSEDTLQQLYCDTCKRFLADRLVEGTCPIPGCEYDSARGDQCENCGNLLNPTELKIPKCKVCRNSPRICDTDHLFLELPLLEDKLQKYINEMSVVGSWSQNAIQTTNSWFKMGLKKRCITRDLKWGVPVPHEKYSDKVFYVWFDAPIGYISITAGYTRDWEKWWKNPENVELFQFMGKDNVPFHTGGRCGSGGGNSIGKGKEAVGKFSKSKGVGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWSDLQAKLNTELLNNLGNFVNRVLSFIAKPAGQGYDSIIPTVPDDVSGDSHDPTKKFANKVAAYMEQYIESMEKSDIISFCKTVKVKLKQGLKIAMSISGEGNAYLQETEFWRLYKQNQSLCSLVMKTAAGIVYLLACLLEPFMPSFSLEQLNLSVDTHLSLSDDKGDVDRVKRPWDLVSAGHKIGTPKPLFRELKDEEVEVFRKKFEGSQADRVVRAEAEAAENVAEQLKKTKVSDGTEKKKPAAKASSSGAKNKAAAEPEITITRLDIRVGLIKKAEKHPDADSLYVEEIDVGEEQTRTVVSGLVKYIPLDEMQNRKVCVLCNLKPATMRGIKSQAMVLAASNADHTMVELVEPPSSALVGERITFPGYEGNPDELLNPKKKVWETLQADLHTNEKLEACYKDIPLTTSAGICTVPSIGNGTIR*