Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0390420 | RYR07039.1 | 40.206 | 388 | 176 | 11 | 9 | 348 | 396 | 775 | 7.84e-68 | 244 |
Msa0390420 | RYR07039.1 | 42.954 | 589 | 264 | 15 | 17 | 547 | 16 | 590 | 3.05e-132 | 414 |
Msa0390420 | RYR07039.1 | 43.874 | 604 | 254 | 13 | 20 | 550 | 200 | 791 | 2.74e-145 | 448 |
Msa0390420 | RYR07039.1 | 44.444 | 198 | 94 | 4 | 9 | 196 | 596 | 787 | 1.60e-36 | 157 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0390420 | sp|P13087|MIRA_SYNDU | 43.719 | 199 | 92 | 5 | 361 | 550 | 30 | 217 | 2.97e-43 | 156 |
Msa0390420 | sp|P13087|MIRA_SYNDU | 51.852 | 135 | 57 | 4 | 67 | 193 | 76 | 210 | 1.16e-33 | 130 |
Msa0390420 | sp|P13087|MIRA_SYNDU | 44.805 | 154 | 72 | 6 | 216 | 356 | 57 | 210 | 1.01e-29 | 119 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0390420 | A0A444YYM6 | 40.206 | 388 | 176 | 11 | 9 | 348 | 396 | 775 | 3.75e-68 | 244 |
Msa0390420 | A0A444YYM6 | 42.954 | 589 | 264 | 15 | 17 | 547 | 16 | 590 | 1.46e-132 | 414 |
Msa0390420 | A0A444YYM6 | 43.874 | 604 | 254 | 13 | 20 | 550 | 200 | 791 | 1.31e-145 | 448 |
Msa0390420 | A0A444YYM6 | 44.444 | 198 | 94 | 4 | 9 | 196 | 596 | 787 | 7.63e-37 | 157 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0390420 | Msa0962100 | 0.863893 | 1.797642e-64 | -8.615850e-47 |
Msa0390420 | Msa1142850 | 0.809762 | 1.612036e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0390420 | MtrunA17_Chr6g0481961 | 96.517 | 201 | 6 | 1 | 350 | 550 | 14 | 213 | 5.93e-139 | 400 |
Msa0390420 | MtrunA17_Chr6g0481961 | 81.340 | 209 | 26 | 2 | 1 | 196 | 1 | 209 | 2.31e-103 | 310 |
Msa0390420 | MtrunA17_Chr6g0481961 | 85.119 | 168 | 21 | 2 | 193 | 356 | 39 | 206 | 1.16e-96 | 292 |
Msa0390420 | MtrunA17_Chr6g0481951 | 96.020 | 201 | 7 | 1 | 350 | 550 | 14 | 213 | 9.32e-138 | 397 |
Msa0390420 | MtrunA17_Chr6g0481951 | 80.861 | 209 | 27 | 2 | 1 | 196 | 1 | 209 | 2.96e-102 | 307 |
Msa0390420 | MtrunA17_Chr6g0481951 | 84.524 | 168 | 22 | 2 | 193 | 356 | 39 | 206 | 1.28e-87 | 269 |
Msa0390420 | MtrunA17_Chr6g0482031 | 62.500 | 200 | 68 | 4 | 354 | 550 | 17 | 212 | 1.73e-78 | 246 |
Msa0390420 | MtrunA17_Chr6g0482031 | 50.515 | 194 | 79 | 5 | 18 | 196 | 17 | 208 | 3.67e-55 | 185 |
Msa0390420 | MtrunA17_Chr6g0482031 | 58.865 | 141 | 52 | 4 | 206 | 342 | 52 | 190 | 1.07e-48 | 167 |
Msa0390420 | MtrunA17_Chr6g0482041 | 58.706 | 201 | 80 | 3 | 351 | 550 | 14 | 212 | 1.36e-72 | 230 |
Msa0390420 | MtrunA17_Chr6g0482041 | 51.429 | 210 | 86 | 5 | 1 | 196 | 1 | 208 | 3.74e-59 | 195 |
Msa0390420 | MtrunA17_Chr6g0482041 | 56.250 | 144 | 58 | 3 | 209 | 348 | 54 | 196 | 2.41e-45 | 159 |
Msa0390420 | MtrunA17_Chr6g0482011 | 56.633 | 196 | 76 | 2 | 352 | 547 | 15 | 201 | 5.35e-68 | 218 |
Msa0390420 | MtrunA17_Chr6g0482011 | 50.262 | 191 | 80 | 3 | 16 | 196 | 15 | 200 | 1.59e-55 | 186 |
Msa0390420 | MtrunA17_Chr6g0482011 | 58.156 | 141 | 56 | 1 | 211 | 348 | 48 | 188 | 2.06e-50 | 172 |
Msa0390420 | MtrunA17_Chr6g0482021 | 49.261 | 203 | 80 | 6 | 352 | 550 | 16 | 199 | 1.56e-53 | 180 |
Msa0390420 | MtrunA17_Chr6g0482021 | 42.786 | 201 | 104 | 6 | 1 | 196 | 1 | 195 | 6.28e-38 | 138 |
Msa0390420 | MtrunA17_Chr6g0482021 | 48.507 | 134 | 61 | 5 | 217 | 345 | 50 | 180 | 1.49e-32 | 124 |
Msa0390420 | MtrunA17_Chr7g0228581 | 48.128 | 187 | 85 | 4 | 365 | 550 | 27 | 202 | 3.08e-51 | 174 |
Msa0390420 | MtrunA17_Chr7g0228581 | 50.340 | 147 | 67 | 3 | 54 | 196 | 54 | 198 | 2.87e-41 | 147 |
Msa0390420 | MtrunA17_Chr7g0228581 | 50.355 | 141 | 63 | 4 | 221 | 356 | 57 | 195 | 9.70e-38 | 138 |
Msa0390420 | MtrunA17_Chr6g0481911 | 42.132 | 197 | 92 | 8 | 362 | 550 | 21 | 203 | 2.18e-35 | 131 |
Msa0390420 | MtrunA17_Chr6g0481911 | 45.890 | 146 | 71 | 5 | 52 | 190 | 47 | 191 | 6.66e-31 | 119 |
Msa0390420 | MtrunA17_Chr6g0481911 | 44.218 | 147 | 73 | 6 | 216 | 354 | 47 | 192 | 1.10e-27 | 110 |
Msa0390420 | MtrunA17_Chr6g0481941 | 42.000 | 200 | 90 | 9 | 362 | 550 | 21 | 205 | 3.95e-34 | 128 |
Msa0390420 | MtrunA17_Chr6g0481941 | 48.837 | 129 | 60 | 5 | 66 | 190 | 67 | 193 | 1.56e-29 | 115 |
Msa0390420 | MtrunA17_Chr6g0481941 | 46.923 | 130 | 62 | 6 | 230 | 354 | 67 | 194 | 4.66e-26 | 105 |
Msa0390420 | MtrunA17_Chr3g0137441 | 29.381 | 194 | 108 | 6 | 365 | 550 | 27 | 199 | 3.99e-16 | 77.4 |
Msa0390420 | MtrunA17_Chr3g0137421 | 29.665 | 209 | 113 | 8 | 350 | 550 | 15 | 197 | 7.92e-15 | 73.6 |
Msa0390420 | MtrunA17_Chr3g0137411 | 33.333 | 210 | 104 | 11 | 350 | 549 | 15 | 198 | 1.46e-14 | 72.8 |
Msa0390420 | MtrunA17_Chr3g0137411 | 35.714 | 140 | 73 | 6 | 58 | 190 | 56 | 185 | 3.25e-11 | 63.2 |
Msa0390420 | MtrunA17_Chr8g0359111 | 29.952 | 207 | 123 | 8 | 350 | 549 | 10 | 201 | 3.46e-14 | 71.6 |
Msa0390420 | MtrunA17_Chr2g0314441 | 32.995 | 197 | 103 | 9 | 360 | 550 | 25 | 198 | 4.92e-14 | 71.2 |
Msa0390420 | MtrunA17_Chr6g0476921 | 30.102 | 196 | 112 | 11 | 362 | 549 | 23 | 201 | 3.74e-13 | 68.9 |
Msa0390420 | MtrunA17_Chr6g0476921 | 32.222 | 180 | 105 | 9 | 26 | 194 | 23 | 196 | 7.83e-12 | 65.1 |
Msa0390420 | MtrunA17_Chr6g0476921 | 32.877 | 146 | 86 | 8 | 217 | 354 | 51 | 192 | 2.15e-11 | 63.5 |
Msa0390420 | MtrunA17_Chr2g0314431 | 32.143 | 196 | 109 | 9 | 359 | 550 | 24 | 199 | 4.07e-12 | 65.5 |
Msa0390420 | MtrunA17_Chr8g0359161 | 28.947 | 190 | 113 | 8 | 367 | 549 | 29 | 203 | 1.45e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0390420 | AT1G17860.1 | 43.878 | 196 | 85 | 7 | 359 | 550 | 21 | 195 | 2.83e-41 | 147 |
Msa0390420 | AT1G17860.1 | 39.604 | 202 | 103 | 8 | 1 | 195 | 1 | 190 | 1.29e-32 | 124 |
Msa0390420 | AT1G17860.1 | 37.368 | 190 | 100 | 8 | 174 | 356 | 11 | 188 | 2.28e-27 | 109 |
Msa0390420 | AT1G73260.1 | 37.129 | 202 | 105 | 7 | 357 | 550 | 18 | 205 | 6.15e-27 | 108 |
Msa0390420 | AT1G73260.1 | 37.748 | 151 | 83 | 5 | 52 | 193 | 50 | 198 | 2.88e-20 | 90.1 |
Msa0390420 | AT1G73260.1 | 36.184 | 152 | 85 | 6 | 216 | 357 | 50 | 199 | 1.29e-17 | 82.4 |
Msa0390420 | AT1G73325.1 | 35.859 | 198 | 104 | 9 | 359 | 550 | 23 | 203 | 5.23e-23 | 98.2 |
Find 125 sgRNAs with CRISPR-Local
Find 1027 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCTTGAACCAATTATTAA+TGG | 0.190104 | 3_2:+1230863 | None:intergenic |
AATCTTGAACCAATTATTAA+TGG | 0.190104 | 3_2:+1239450 | None:intergenic |
AATCTTGAACCAATTATTAA+TGG | 0.190104 | 3_2:+1244124 | None:intergenic |
ACACGAATAACACCCTTCTT+AGG | 0.207105 | 3_2:+1244290 | None:intergenic |
TTGAGCACACAACCACTTCT+TGG | 0.247520 | 3_2:-1244545 | Msa0390420:CDS |
CTTGTTGAAATTTAACTTTA+AGG | 0.254449 | 3_2:+1230709 | None:intergenic |
TTAAGTTCACAACCACTTCT+TGG | 0.258897 | 3_2:-1231284 | Msa0390420:CDS |
GATGGGAAACCATTAATAAT+TGG | 0.274442 | 3_2:-1230872 | Msa0390420:CDS |
GATGGGAAACCATTAATAAT+TGG | 0.274442 | 3_2:-1239459 | Msa0390420:CDS |
GATGGGAAACCATTAATAAT+TGG | 0.274442 | 3_2:-1244133 | Msa0390420:CDS |
GGAGTGTTTGTTGATGAAAA+TGG | 0.277827 | 3_2:-1230762 | Msa0390420:CDS |
GGAGTGTTTGTTGATGAAAA+TGG | 0.277827 | 3_2:-1239349 | Msa0390420:CDS |
GGAGTGTTTGTTGATGAAAA+TGG | 0.277827 | 3_2:-1244023 | Msa0390420:CDS |
CACCTGTGAATGGGTATAAC+CGG | 0.336556 | 3_2:+1231182 | None:intergenic |
AGACAATGGTTTATTACTAT+TGG | 0.339490 | 3_2:-1230915 | Msa0390420:CDS |
AGACAATGGTTTATTACTAT+TGG | 0.339490 | 3_2:-1239502 | Msa0390420:CDS |
AGACAATGGTTTATTACTAT+TGG | 0.339490 | 3_2:-1244176 | Msa0390420:CDS |
TGTTGAAATTTAACTTTAAG+AGG | 0.341900 | 3_2:+1243972 | None:intergenic |
TTGTTGAAATTTAACTTTAA+GGG | 0.352360 | 3_2:+1230710 | None:intergenic |
ACACCCTTCTTAGGGTTAAC+AGG | 0.353495 | 3_2:+1244299 | None:intergenic |
ATTCACAGGTGTGGACCTTA+TGG | 0.370571 | 3_2:-1231170 | Msa0390420:CDS |
ATTCACAGGTGTGGACCTTA+TGG | 0.370571 | 3_2:-1239757 | Msa0390420:intron |
ATTCACAGGTGTGGACCTTA+TGG | 0.370571 | 3_2:-1244431 | Msa0390420:intron |
TGAAAATGGGAATAAACGTT+TGG | 0.383026 | 3_2:-1244009 | Msa0390420:CDS |
TGGTTCAAGATTGAGAAGTA+TGG | 0.396705 | 3_2:-1230852 | Msa0390420:CDS |
TGGTTCAAGATTGAGAAGTA+TGG | 0.396705 | 3_2:-1239439 | Msa0390420:CDS |
TGGTTCAAGATTGAGAAGTA+TGG | 0.396705 | 3_2:-1244113 | Msa0390420:CDS |
TGGTGGTGTTGTTGGAAATC+CGG | 0.404788 | 3_2:-1230895 | Msa0390420:CDS |
TGGTGGTGTTGTTGGAAATC+CGG | 0.404788 | 3_2:-1239482 | Msa0390420:CDS |
TGGTGGTGTTGTTGGAAATC+CGG | 0.404788 | 3_2:-1244156 | Msa0390420:CDS |
GATCAAGTGGTCGACACATT+AGG | 0.407221 | 3_2:-1231242 | Msa0390420:CDS |
GAGTGTTTGTTGATGAAAAT+GGG | 0.410318 | 3_2:-1230761 | Msa0390420:CDS |
GAGTGTTTGTTGATGAAAAT+GGG | 0.410318 | 3_2:-1239348 | Msa0390420:CDS |
GAGTGTTTGTTGATGAAAAT+GGG | 0.410318 | 3_2:-1244022 | Msa0390420:CDS |
TGAAAATGGGAATAAGCGTT+TGG | 0.412010 | 3_2:-1230748 | Msa0390420:CDS |
ATTACTATTGGTGGTGTTGT+TGG | 0.423355 | 3_2:-1230903 | Msa0390420:CDS |
ATTACTATTGGTGGTGTTGT+TGG | 0.423355 | 3_2:-1239490 | Msa0390420:CDS |
ATTACTATTGGTGGTGTTGT+TGG | 0.423355 | 3_2:-1244164 | Msa0390420:CDS |
TATGCCTGTTAACCCTAAGA+AGG | 0.446168 | 3_2:-1244303 | Msa0390420:CDS |
CACGAATAACACCCTTCTTA+GGG | 0.454923 | 3_2:+1244291 | None:intergenic |
CTACTTCTACATTTACCATA+AGG | 0.458135 | 3_2:+1231155 | None:intergenic |
CTACTTCTACATTTACCATA+AGG | 0.458135 | 3_2:+1239742 | None:intergenic |
TTGAAAGACTGCACCACACT+AGG | 0.459638 | 3_2:+1230804 | None:intergenic |
TTGAAAGACTGCACCACACT+AGG | 0.459638 | 3_2:+1244065 | None:intergenic |
GTACTTCTACATTTACCATA+AGG | 0.462600 | 3_2:+1244416 | None:intergenic |
AGTCTTGCCCTAGCAAGTAT+TGG | 0.463122 | 3_2:-1231125 | Msa0390420:CDS |
AGTCTTGCCCTAGCAAGTAT+TGG | 0.463122 | 3_2:-1239712 | Msa0390420:CDS |
AGTCTTGCCCTAGCAAGTAT+TGG | 0.463122 | 3_2:-1244386 | Msa0390420:CDS |
GTCTTTCAAGCATATGTGTA+AGG | 0.466167 | 3_2:-1230790 | Msa0390420:CDS |
GTCTTTCAAGCATATGTGTA+AGG | 0.466167 | 3_2:-1244051 | Msa0390420:CDS |
AACTTGCCCTCTTGATGTTG+TGG | 0.473079 | 3_2:-1231099 | Msa0390420:CDS |
AACTTGCCCTCTTGATGTTG+TGG | 0.473079 | 3_2:-1239686 | Msa0390420:CDS |
AACTTGCCCTCTTGATGTTG+TGG | 0.473079 | 3_2:-1244360 | Msa0390420:CDS |
CAATGGTTTATTACTATTGG+TGG | 0.475905 | 3_2:-1230912 | Msa0390420:CDS |
CAATGGTTTATTACTATTGG+TGG | 0.475905 | 3_2:-1239499 | Msa0390420:CDS |
CAATGGTTTATTACTATTGG+TGG | 0.475905 | 3_2:-1244173 | Msa0390420:CDS |
TATGGTAAATGTAGAAGTAC+TGG | 0.482361 | 3_2:-1244413 | Msa0390420:CDS |
TTATTAATGGTTTCCCATCC+CGG | 0.501459 | 3_2:+1230876 | None:intergenic |
TTATTAATGGTTTCCCATCC+CGG | 0.501459 | 3_2:+1239463 | None:intergenic |
TTATTAATGGTTTCCCATCC+CGG | 0.501459 | 3_2:+1244137 | None:intergenic |
AAGCATATGTGTAAGGATGT+TGG | 0.504444 | 3_2:-1230783 | Msa0390420:CDS |
AAGCATATGTGTAAGGATGT+TGG | 0.504444 | 3_2:-1244044 | Msa0390420:CDS |
TTCAAAGACTGCACCACACT+AGG | 0.506900 | 3_2:+1239391 | None:intergenic |
AAGCATATGTGTAAGGATGT+TGG | 0.510678 | 3_2:-1239370 | Msa0390420:CDS |
ATAAGGTCCACACCTGTGAA+TGG | 0.514083 | 3_2:+1231172 | None:intergenic |
GTCTTTGAAGCATATGTGTA+AGG | 0.517598 | 3_2:-1239377 | Msa0390420:CDS |
TAAGGTCCACACCTGTGAAT+GGG | 0.519817 | 3_2:+1231173 | None:intergenic |
TTAACGGGTGTAAAGGTTAG+TGG | 0.525966 | 3_2:+1231053 | None:intergenic |
TTAACGGGTGTAAAGGTTAG+TGG | 0.525966 | 3_2:+1239640 | None:intergenic |
AAGTGGTTGTGAACTTAAGA+TGG | 0.528274 | 3_2:+1231289 | None:intergenic |
TGTTGAAATTTAACTTTAAG+GGG | 0.534245 | 3_2:+1230711 | None:intergenic |
TGCTAATTACTATATTATCC+CGG | 0.540548 | 3_2:-1231201 | Msa0390420:CDS |
TGCTAATTACTATATTATCC+CGG | 0.540548 | 3_2:-1239788 | Msa0390420:intron |
TGCTAATTACTATATTATCC+CGG | 0.540548 | 3_2:-1244462 | Msa0390420:intron |
GGTGGTGTTGTTGGAAATCC+GGG | 0.542963 | 3_2:-1230894 | Msa0390420:CDS |
GGTGGTGTTGTTGGAAATCC+GGG | 0.542963 | 3_2:-1239481 | Msa0390420:CDS |
GGTGGTGTTGTTGGAAATCC+GGG | 0.542963 | 3_2:-1244155 | Msa0390420:CDS |
GCTTCAGCTGCTCCAAGAAG+TGG | 0.551993 | 3_2:+1231272 | None:intergenic |
GCTTCAGCTGCTCCAAGAAG+TGG | 0.551993 | 3_2:+1244533 | None:intergenic |
TCCCGGTTATACCCATTCAC+AGG | 0.554778 | 3_2:-1231184 | Msa0390420:CDS |
ATGCCTGTTAACCCTAAGAA+GGG | 0.557642 | 3_2:-1244302 | Msa0390420:CDS |
GTGTTGTTGGAAATCCGGGA+TGG | 0.564391 | 3_2:-1230890 | Msa0390420:CDS |
GTGTTGTTGGAAATCCGGGA+TGG | 0.564391 | 3_2:-1239477 | Msa0390420:CDS |
GTGTTGTTGGAAATCCGGGA+TGG | 0.564391 | 3_2:-1244151 | Msa0390420:CDS |
TGTTGTTGGAAATCCGGGAT+GGG | 0.569448 | 3_2:-1230889 | Msa0390420:CDS |
TGTTGTTGGAAATCCGGGAT+GGG | 0.569448 | 3_2:-1239476 | Msa0390420:CDS |
TGTTGTTGGAAATCCGGGAT+GGG | 0.569448 | 3_2:-1244150 | Msa0390420:CDS |
TACTTGTCTACACCATTCCA+TGG | 0.570760 | 3_2:-1230970 | Msa0390420:CDS |
TACTTGTCTACACCATTCCA+TGG | 0.570760 | 3_2:-1239557 | Msa0390420:CDS |
TGAAAGACTGCACCACACTA+GGG | 0.577137 | 3_2:+1230805 | None:intergenic |
TGAAAGACTGCACCACACTA+GGG | 0.577137 | 3_2:+1244066 | None:intergenic |
TCAAAGACTGCACCACACTA+GGG | 0.579576 | 3_2:+1239392 | None:intergenic |
TTAACAGGCATAAAAGTAAG+TGG | 0.579627 | 3_2:+1244314 | None:intergenic |
TATGGTAAATGTAGAAGTAG+TGG | 0.581114 | 3_2:-1231152 | Msa0390420:CDS |
TATGGTAAATGTAGAAGTAG+TGG | 0.581114 | 3_2:-1239739 | Msa0390420:CDS |
CAAGCTTCCACACCATGGAA+TGG | 0.584005 | 3_2:+1230958 | None:intergenic |
CAAGCTTCCACACCATGGAA+TGG | 0.584005 | 3_2:+1239545 | None:intergenic |
CAAGCTTCCACACCATGGAA+TGG | 0.584005 | 3_2:+1244219 | None:intergenic |
AAGTGGTTGTGTGCTCAAGA+AGG | 0.588756 | 3_2:+1244550 | None:intergenic |
GTCTACACCATTCCATGGTG+TGG | 0.596900 | 3_2:-1230965 | Msa0390420:CDS |
GTCTACACCATTCCATGGTG+TGG | 0.596900 | 3_2:-1239552 | Msa0390420:CDS |
GTCTACACCATTCCATGGTG+TGG | 0.596900 | 3_2:-1244226 | Msa0390420:CDS |
ACCTGTGAATGGGTATAACC+GGG | 0.598899 | 3_2:+1231183 | None:intergenic |
AACTTGTCTACACCATTCCA+TGG | 0.601053 | 3_2:-1244231 | Msa0390420:CDS |
TTAATGTATCTAAGAGACAA+TGG | 0.603832 | 3_2:-1230929 | Msa0390420:CDS |
TTAATGTATCTAAGAGACAA+TGG | 0.603832 | 3_2:-1239516 | Msa0390420:intron |
TTAATGTATCTAAGAGACAA+TGG | 0.603832 | 3_2:-1244190 | Msa0390420:intron |
GTATGGTGATGCTTATAAGT+TGG | 0.604702 | 3_2:-1230835 | Msa0390420:CDS |
GTATGGTGATGCTTATAAGT+TGG | 0.604702 | 3_2:-1239422 | Msa0390420:CDS |
TGAAGCTTCAAATGATCAAG+TGG | 0.606293 | 3_2:-1231255 | Msa0390420:CDS |
TCAACAACCACAACATCAAG+AGG | 0.610607 | 3_2:+1231092 | None:intergenic |
TCAACAACCACAACATCAAG+AGG | 0.610607 | 3_2:+1239679 | None:intergenic |
TCAACAACCACAACATCAAG+AGG | 0.610607 | 3_2:+1244353 | None:intergenic |
TGCTCAAGAAGGCAAAGAGA+AGG | 0.611541 | 3_2:+1244561 | None:intergenic |
GTATGGTGATGATTATAAGT+TGG | 0.617624 | 3_2:-1244096 | Msa0390420:CDS |
TATAGTAATTAGCATCAGCT+CGG | 0.621190 | 3_2:+1231210 | None:intergenic |
TATAGTAATTAGCATCAGCT+CGG | 0.621190 | 3_2:+1239797 | None:intergenic |
TATAGTAATTAGCATCAGCT+CGG | 0.621190 | 3_2:+1244471 | None:intergenic |
GTTATACCCATTCACAGGTG+TGG | 0.621916 | 3_2:-1231179 | Msa0390420:CDS |
ACGATCAAGCTTCCACACCA+TGG | 0.629046 | 3_2:+1230953 | None:intergenic |
ACGATCAAGCTTCCACACCA+TGG | 0.629046 | 3_2:+1239540 | None:intergenic |
ACGATCAAGCTTCCACACCA+TGG | 0.629046 | 3_2:+1244214 | None:intergenic |
CAACAACCACAACATCAAGA+GGG | 0.678487 | 3_2:+1231093 | None:intergenic |
CAACAACCACAACATCAAGA+GGG | 0.678487 | 3_2:+1239680 | None:intergenic |
CAACAACCACAACATCAAGA+GGG | 0.678487 | 3_2:+1244354 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATATTTTTTTTCAACATT+TGG | + | chr3_2:1231529-1231548 | None:intergenic | 10.0% |
!! | AATATACATTAATATCTAAA+AGG | + | chr3_2:1231634-1231653 | None:intergenic | 10.0% |
!! | TCTTAATCTTAAAATTAATA+AGG | - | chr3_2:1231831-1231850 | Msa0390420:intron | 10.0% |
!! | TTTATTATTTATATAACAGA+GGG | + | chr3_2:1231902-1231921 | None:intergenic | 10.0% |
!!! | TTTTATTATTTATATAACAG+AGG | + | chr3_2:1231903-1231922 | None:intergenic | 10.0% |
!! | ATTAGAAGAAAAAATATATA+TGG | + | chr3_2:1233259-1233278 | None:intergenic | 10.0% |
!!! | TTAAAAAATTATGTTTTCTT+TGG | + | chr3_2:1233604-1233623 | None:intergenic | 10.0% |
!!! | AAAGAAAACATAATTTTTTA+AGG | - | chr3_2:1233603-1233622 | Msa0390420:intron | 10.0% |
!!! | TATGACATTTTTTTTTAAAA+AGG | - | chr3_2:1234825-1234844 | Msa0390420:intron | 10.0% |
!!! | TATTTATTTTATTTGTAACA+AGG | + | chr3_2:1236123-1236142 | None:intergenic | 10.0% |
!!! | ATTTTTTGAAATATCTATTT+TGG | + | chr3_2:1237523-1237542 | None:intergenic | 10.0% |
!!! | TTTTTAATGTTATTTAATCT+TGG | - | chr3_2:1242878-1242897 | Msa0390420:intron | 10.0% |
!! | ATATTTAGATTCTAAATGTT+AGG | - | chr3_2:1231649-1231668 | Msa0390420:intron | 15.0% |
!! | TATTTATTTCATTTATAACG+AGG | + | chr3_2:1231678-1231697 | None:intergenic | 15.0% |
!! | AAAATTCATTTATAACCTAT+TGG | - | chr3_2:1233488-1233507 | Msa0390420:intron | 15.0% |
!! | TGAAAATAAAATTGTAATGT+TGG | - | chr3_2:1234341-1234360 | Msa0390420:intron | 15.0% |
!! | TTTCTTCTTATAATAAGAAT+CGG | + | chr3_2:1234648-1234667 | None:intergenic | 15.0% |
!! | CAAAATGTTACAATAATTAA+TGG | + | chr3_2:1234689-1234708 | None:intergenic | 15.0% |
!!! | GTTTCACAATTTTTTTATAA+GGG | + | chr3_2:1234730-1234749 | None:intergenic | 15.0% |
!!! | TGTTTCACAATTTTTTTATA+AGG | + | chr3_2:1234731-1234750 | None:intergenic | 15.0% |
!!! | TTGAAAATTTTCTTATACTA+CGG | - | chr3_2:1234861-1234880 | Msa0390420:intron | 15.0% |
!!! | TTTCTTTTTTTAAATGAAAG+AGG | - | chr3_2:1235154-1235173 | Msa0390420:intron | 15.0% |
!!! | TTCTTTTTTTAAATGAAAGA+GGG | - | chr3_2:1235155-1235174 | Msa0390420:intron | 15.0% |
!!! | AATTTCCTCATTTTTAATTA+AGG | + | chr3_2:1235229-1235248 | None:intergenic | 15.0% |
!! | TATCTTTCAATAATGTTTAT+TGG | - | chr3_2:1236078-1236097 | Msa0390420:intron | 15.0% |
!! | ATCTTTCAATAATGTTTATT+GGG | - | chr3_2:1236079-1236098 | Msa0390420:intron | 15.0% |
!! | AAAAATATATAGAAAATCGT+TGG | - | chr3_2:1236571-1236590 | Msa0390420:intron | 15.0% |
!! | AAAACTAAAATCCTATTATT+TGG | + | chr3_2:1236661-1236680 | None:intergenic | 15.0% |
!!! | AAATAATAGGATTTTAGTTT+TGG | - | chr3_2:1236660-1236679 | Msa0390420:intron | 15.0% |
!!! | AATAATAGGATTTTAGTTTT+GGG | - | chr3_2:1236661-1236680 | Msa0390420:intron | 15.0% |
!! | TTCTACATAATTATAATCTT+AGG | + | chr3_2:1238881-1238900 | None:intergenic | 15.0% |
!!! | AATTAGTCTATAAAACAATT+TGG | - | chr3_2:1239294-1239313 | Msa0390420:intron | 15.0% |
!!! | TTTTGATTTATATTCTGAAA+TGG | + | chr3_2:1240626-1240645 | None:intergenic | 15.0% |
!! | ATGTTAAACTTACTTTAATA+TGG | - | chr3_2:1242029-1242048 | Msa0390420:intron | 15.0% |
!! | TGTTAAACTTACTTTAATAT+GGG | - | chr3_2:1242030-1242049 | Msa0390420:intron | 15.0% |
!! | TATAGTACATTATTATCTAT+GGG | + | chr3_2:1243870-1243889 | None:intergenic | 15.0% |
!!! | TTGTTGAAATTTAACTTTAA+GGG | + | chr3_2:1231323-1231342 | None:intergenic | 15.0% |
!! | AATCTTGAACCAATTATTAA+TGG | + | chr3_2:1231170-1231189 | None:intergenic | 20.0% |
!!! | TGTTGAAATTTAACTTTAAG+AGG | + | chr3_2:1231322-1231341 | None:intergenic | 20.0% |
!!! | CATTTCTCTTTCATTTTATT+GGG | - | chr3_2:1231397-1231416 | Msa0390420:intron | 20.0% |
!! | ATAACTACATGATTCAAATT+GGG | + | chr3_2:1232034-1232053 | None:intergenic | 20.0% |
!! | TAATGAGTAATAAAAAGTCA+TGG | + | chr3_2:1232167-1232186 | None:intergenic | 20.0% |
!! | ATATTATAGTTTCATCCTAT+TGG | - | chr3_2:1232252-1232271 | Msa0390420:intron | 20.0% |
!! | TAATTCTTGATATCAAGATT+AGG | + | chr3_2:1232925-1232944 | None:intergenic | 20.0% |
!!! | ATGTGAAAAGTTGTTTTTAA+TGG | + | chr3_2:1233285-1233304 | None:intergenic | 20.0% |
!! | CATTAAAATCATATCCATAA+GGG | + | chr3_2:1233358-1233377 | None:intergenic | 20.0% |
!! | TCATTAAAATCATATCCATA+AGG | + | chr3_2:1233359-1233378 | None:intergenic | 20.0% |
!! | TAAAATATAACTCGCATATT+CGG | - | chr3_2:1233640-1233659 | Msa0390420:intron | 20.0% |
!! | AAACGTAAATTAAAGAATAG+TGG | + | chr3_2:1233751-1233770 | None:intergenic | 20.0% |
!!! | CTATTCTTTAATTTACGTTT+AGG | - | chr3_2:1233751-1233770 | Msa0390420:intron | 20.0% |
!! | AAAAGAGAAAGAGTAAATTA+TGG | - | chr3_2:1233899-1233918 | Msa0390420:intron | 20.0% |
!! | AAAGAGAAAGAGTAAATTAT+GGG | - | chr3_2:1233900-1233919 | Msa0390420:intron | 20.0% |
!!! | TTTTTTCTTTTAGATTGGTT+CGG | + | chr3_2:1233935-1233954 | None:intergenic | 20.0% |
!! | TAATACTCATAGAAATTCAA+TGG | - | chr3_2:1234135-1234154 | Msa0390420:intron | 20.0% |
!!! | ATTGTTAGTAGTTTACTTTT+GGG | + | chr3_2:1234599-1234618 | None:intergenic | 20.0% |
!!! | AATTGTTAGTAGTTTACTTT+TGG | + | chr3_2:1234600-1234619 | None:intergenic | 20.0% |
!!! | ATCATATAGAGTATCATAAT+AGG | - | chr3_2:1234884-1234903 | Msa0390420:intron | 20.0% |
!!! | CTTAATATGATTTCAGTTTT+TGG | - | chr3_2:1235005-1235024 | Msa0390420:intron | 20.0% |
!! | TTTGACCTTAATTAAAAATG+AGG | - | chr3_2:1235221-1235240 | Msa0390420:intron | 20.0% |
!! | TAAAAATGAGGAAATTGTTT+AGG | - | chr3_2:1235233-1235252 | Msa0390420:intron | 20.0% |
!!! | AAGTAATTGGTAATTAAGTT+TGG | + | chr3_2:1235343-1235362 | None:intergenic | 20.0% |
!!! | TTTTGTATGCTTTAAGTAAT+TGG | + | chr3_2:1235356-1235375 | None:intergenic | 20.0% |
!! | AATCTTGAACCAATTATTAA+TGG | + | chr3_2:1231170-1231189 | None:intergenic | 20.0% |
!!! | TGTTGAAATTTAACTTTAAG+AGG | + | chr3_2:1231322-1231341 | None:intergenic | 20.0% |
!!! | TTTTATGCATTATATTAGAG+AGG | + | chr3_2:1236032-1236051 | None:intergenic | 20.0% |
!!! | GATGTTACTTTTGTAAATTA+CGG | + | chr3_2:1236217-1236236 | None:intergenic | 20.0% |
!! | ATTTACAAAAGTAACATCTA+TGG | - | chr3_2:1236219-1236238 | Msa0390420:intron | 20.0% |
!!! | TTTTATACTGAAATACGTTT+AGG | + | chr3_2:1236538-1236557 | None:intergenic | 20.0% |
!! | GTATTTCAGTATAAAACAAT+TGG | - | chr3_2:1236542-1236561 | Msa0390420:intron | 20.0% |
!!! | TTGGATACTTTTAACAATTT+GGG | + | chr3_2:1236642-1236661 | None:intergenic | 20.0% |
!!! | TTTGGATACTTTTAACAATT+TGG | + | chr3_2:1236643-1236662 | None:intergenic | 20.0% |
!!! | GTTAAAAGTATCCAAATAAT+AGG | - | chr3_2:1236647-1236666 | Msa0390420:intron | 20.0% |
!! | AATGAGAAAATATCTCAAAT+AGG | - | chr3_2:1236703-1236722 | Msa0390420:intron | 20.0% |
!! | ATGAACATGTGTTTATAAAT+GGG | + | chr3_2:1236965-1236984 | None:intergenic | 20.0% |
!! | ATGATATCATCTTAAAAATG+TGG | - | chr3_2:1237118-1237137 | Msa0390420:intron | 20.0% |
!!! | AAGTTAAGTATTGTTGAAAT+TGG | + | chr3_2:1237169-1237188 | None:intergenic | 20.0% |
!! | TAGAAAATAGTGTACAAATT+TGG | + | chr3_2:1237296-1237315 | None:intergenic | 20.0% |
!!! | AACACACATGTAATTTTAAA+AGG | - | chr3_2:1237546-1237565 | Msa0390420:intron | 20.0% |
!! | ATAAATATGATGAATGGTTT+AGG | + | chr3_2:1237648-1237667 | None:intergenic | 20.0% |
!! | TAAACCATTCATCATATTTA+TGG | - | chr3_2:1237647-1237666 | Msa0390420:intron | 20.0% |
!! | TATACCATAAATATGATGAA+TGG | + | chr3_2:1237654-1237673 | None:intergenic | 20.0% |
!! | ATACTATATACACAAATGTA+AGG | - | chr3_2:1237684-1237703 | Msa0390420:intron | 20.0% |
!! | ATATACTCATTTCTTGAATA+TGG | + | chr3_2:1237724-1237743 | None:intergenic | 20.0% |
!! | ATAAAATAAATGACGTTACT+TGG | - | chr3_2:1238919-1238938 | Msa0390420:intron | 20.0% |
!! | ATAATATAGAGAAACTGAAA+TGG | - | chr3_2:1239462-1239481 | Msa0390420:CDS | 20.0% |
!!! | AAATATTTTTGAGGATCTTT+TGG | + | chr3_2:1239888-1239907 | None:intergenic | 20.0% |
!! | AATTACTTACAGTTCTATAT+TGG | + | chr3_2:1240053-1240072 | None:intergenic | 20.0% |
!!! | ATTTTGTAAGATTAAAATGG+TGG | + | chr3_2:1240236-1240255 | None:intergenic | 20.0% |
!!! | TGGATTTTGTAAGATTAAAA+TGG | + | chr3_2:1240239-1240258 | None:intergenic | 20.0% |
!!! | TGTTACTTATAACTCTTTAA+TGG | + | chr3_2:1240368-1240387 | None:intergenic | 20.0% |
!! | AAAGTAAAACTGTAAAAATG+GGG | + | chr3_2:1241308-1241327 | None:intergenic | 20.0% |
!! | GAAAGTAAAACTGTAAAAAT+GGG | + | chr3_2:1241309-1241328 | None:intergenic | 20.0% |
!! | TGAAAGTAAAACTGTAAAAA+TGG | + | chr3_2:1241310-1241329 | None:intergenic | 20.0% |
!! | ATTGTTAATGATGTAACATT+TGG | - | chr3_2:1242851-1242870 | Msa0390420:intron | 20.0% |
!!! | ACTATATTCCTTTAAAAATC+CGG | - | chr3_2:1243747-1243766 | Msa0390420:intron | 20.0% |
!!! | AAAAGTGTGAAAACATATAT+AGG | - | chr3_2:1243841-1243860 | Msa0390420:intron | 20.0% |
!! | GTATAGTACATTATTATCTA+TGG | + | chr3_2:1243871-1243890 | None:intergenic | 20.0% |
!!! | GAGTAATTTTTAAGTTTGAA+TGG | + | chr3_2:1243930-1243949 | None:intergenic | 20.0% |
!! | AATCTTGAACCAATTATTAA+TGG | + | chr3_2:1231170-1231189 | None:intergenic | 20.0% |
!!! | TGTTGAAATTTAACTTTAAG+GGG | + | chr3_2:1231322-1231341 | None:intergenic | 20.0% |
!!! | CTTGTTGAAATTTAACTTTA+AGG | + | chr3_2:1231324-1231343 | None:intergenic | 20.0% |
! | TGCTAATTACTATATTATCC+CGG | - | chr3_2:1230829-1230848 | Msa0390420:CDS | 25.0% |
! | TTAATGTATCTAAGAGACAA+TGG | - | chr3_2:1231101-1231120 | Msa0390420:CDS | 25.0% |
! | AGACAATGGTTTATTACTAT+TGG | - | chr3_2:1231115-1231134 | Msa0390420:CDS | 25.0% |
!! | GCATTTCTCTTTCATTTTAT+TGG | - | chr3_2:1231396-1231415 | Msa0390420:intron | 25.0% |
! | TAATAAGGAAACCTAACTTT+GGG | + | chr3_2:1231426-1231445 | None:intergenic | 25.0% |
! | TTTAAACTCATGTGTTTGTT+TGG | - | chr3_2:1231870-1231889 | Msa0390420:intron | 25.0% |
! | TTAAACTCATGTGTTTGTTT+GGG | - | chr3_2:1231871-1231890 | Msa0390420:intron | 25.0% |
! | AAAATCATACGCTTGTTTAA+TGG | - | chr3_2:1231930-1231949 | Msa0390420:intron | 25.0% |
! | CATAACTACATGATTCAAAT+TGG | + | chr3_2:1232035-1232054 | None:intergenic | 25.0% |
! | TTTATATTATCTCATCCTCT+TGG | - | chr3_2:1232091-1232110 | Msa0390420:intron | 25.0% |
!! | TACTCATTAAACCTATTTCT+TGG | - | chr3_2:1232178-1232197 | Msa0390420:intron | 25.0% |
!! | ACTCATTAAACCTATTTCTT+GGG | - | chr3_2:1232179-1232198 | Msa0390420:intron | 25.0% |
!! | GATCATAAGTCATTTAGTTT+GGG | - | chr3_2:1232201-1232220 | Msa0390420:intron | 25.0% |
!! | TCTTCACTAATTTTCTCTAA+TGG | - | chr3_2:1232510-1232529 | Msa0390420:intron | 25.0% |
! | TGCATATGAATCATTTGATA+AGG | - | chr3_2:1232642-1232661 | Msa0390420:intron | 25.0% |
! | TTATAGCATGAATGTTTGAA+CGG | - | chr3_2:1233005-1233024 | Msa0390420:intron | 25.0% |
! | TATACTCATTCGATATCTTT+AGG | - | chr3_2:1233119-1233138 | Msa0390420:intron | 25.0% |
!! | AACAACTTTTCACATTCATT+TGG | - | chr3_2:1233290-1233309 | Msa0390420:intron | 25.0% |
! | TTTAAAAAGTAGTACCCTTA+TGG | - | chr3_2:1233341-1233360 | Msa0390420:intron | 25.0% |
! | AGTAGCTATAAAAGATAAGA+TGG | + | chr3_2:1233565-1233584 | None:intergenic | 25.0% |
! | AAAATATAACTCGCATATTC+GGG | - | chr3_2:1233641-1233660 | Msa0390420:intron | 25.0% |
!!! | TTGCGTTTTTTCTTTTAGAT+TGG | + | chr3_2:1233940-1233959 | None:intergenic | 25.0% |
!!! | AATGCGATTTTTTGCTATTT+CGG | + | chr3_2:1233979-1233998 | None:intergenic | 25.0% |
! | AAATAGCAAAAAATCGCATT+TGG | - | chr3_2:1233979-1233998 | Msa0390420:intron | 25.0% |
! | ATGCAGTTCAGTAAAAAAAA+TGG | + | chr3_2:1234021-1234040 | None:intergenic | 25.0% |
!!! | ATTTTTTTTACTGAACTGCA+TGG | - | chr3_2:1234020-1234039 | Msa0390420:intron | 25.0% |
!! | TTAGTGTTTTTCTTACATTG+CGG | + | chr3_2:1234092-1234111 | None:intergenic | 25.0% |
!! | AAATGTATTTATGTGCTACT+TGG | - | chr3_2:1234220-1234239 | Msa0390420:intron | 25.0% |
!!! | TTTTTGTCCACGTTTTAATT+TGG | - | chr3_2:1234292-1234311 | Msa0390420:intron | 25.0% |
! | AATAAGTTTGCAGTTTAGTT+TGG | + | chr3_2:1234517-1234536 | None:intergenic | 25.0% |
! | AACTTATTTATCTTGCAGTT+TGG | - | chr3_2:1234529-1234548 | Msa0390420:intron | 25.0% |
!!! | TTGTTAGTAGTTTACTTTTG+GGG | + | chr3_2:1234598-1234617 | None:intergenic | 25.0% |
!!! | TTCTTATTTTGTACTGCATA+TGG | + | chr3_2:1235068-1235087 | None:intergenic | 25.0% |
! | TTTGATCAATGCAATACAAT+TGG | + | chr3_2:1235199-1235218 | None:intergenic | 25.0% |
! | CTTACATGTTCTTTATCTAT+GGG | + | chr3_2:1235262-1235281 | None:intergenic | 25.0% |
! | TGAAGGATATCAATTTATAG+AGG | + | chr3_2:1235293-1235312 | None:intergenic | 25.0% |
!!! | TAATTAAGTTTGGTTTGTGA+TGG | + | chr3_2:1235333-1235352 | None:intergenic | 25.0% |
! | TGCTAATTACTATATTATCC+CGG | - | chr3_2:1230829-1230848 | Msa0390420:CDS | 25.0% |
! | TTAATGTATCTAAGAGACAA+TGG | - | chr3_2:1231101-1231120 | Msa0390420:CDS | 25.0% |
! | AGACAATGGTTTATTACTAT+TGG | - | chr3_2:1231115-1231134 | Msa0390420:CDS | 25.0% |
! | ATTACTATATTACTATAGCC+AGG | + | chr3_2:1236167-1236186 | None:intergenic | 25.0% |
! | AAGTAACATCTATGGTTAAA+TGG | - | chr3_2:1236227-1236246 | Msa0390420:intron | 25.0% |
!!! | TTCGAAACTTCATTTTTAGA+AGG | + | chr3_2:1236267-1236286 | None:intergenic | 25.0% |
!! | TGGATACTTTTAACAATTTG+GGG | + | chr3_2:1236641-1236660 | None:intergenic | 25.0% |
! | TTTGATACCATGTTGAAATT+GGG | - | chr3_2:1236894-1236913 | Msa0390420:intron | 25.0% |
! | TGAACATGTGTTTATAAATG+GGG | + | chr3_2:1236964-1236983 | None:intergenic | 25.0% |
! | CATGAACATGTGTTTATAAA+TGG | + | chr3_2:1236966-1236985 | None:intergenic | 25.0% |
!!! | TAGTCTCTTTAAGATTCATT+GGG | + | chr3_2:1237099-1237118 | None:intergenic | 25.0% |
!!! | ATAGTCTCTTTAAGATTCAT+TGG | + | chr3_2:1237100-1237119 | None:intergenic | 25.0% |
! | AATGCTTAATCAATAATACC+AGG | - | chr3_2:1237199-1237218 | Msa0390420:intron | 25.0% |
! | TAATTATTAACAAAGTGTGC+AGG | - | chr3_2:1237613-1237632 | Msa0390420:intron | 25.0% |
!!! | AATCACAAGCAACTTTTTTT+GGG | + | chr3_2:1237925-1237944 | None:intergenic | 25.0% |
!!! | AAATCACAAGCAACTTTTTT+TGG | + | chr3_2:1237926-1237945 | None:intergenic | 25.0% |
! | TGCTATTATTGAACTATGAT+AGG | + | chr3_2:1238014-1238033 | None:intergenic | 25.0% |
! | ATAATTATGTTCCTCTATTG+TGG | + | chr3_2:1238153-1238172 | None:intergenic | 25.0% |
! | ATATAACATCATAGAGCTAT+AGG | - | chr3_2:1238347-1238366 | Msa0390420:intron | 25.0% |
! | AATCTTGCAACATATATGAA+TGG | + | chr3_2:1238494-1238513 | None:intergenic | 25.0% |
! | GCTTAAAATTGAAGAACTTA+AGG | + | chr3_2:1238526-1238545 | None:intergenic | 25.0% |
! | TTGATGTTAAACTTGATTCT+TGG | + | chr3_2:1238663-1238682 | None:intergenic | 25.0% |
! | ATCAAAATCAACAATTATGC+CGG | - | chr3_2:1238678-1238697 | Msa0390420:intron | 25.0% |
! | AAGCTAAAAATGAGTAACTA+AGG | + | chr3_2:1238786-1238805 | None:intergenic | 25.0% |
!!! | TTATGGCTTCTAAAATGAAT+TGG | + | chr3_2:1238951-1238970 | None:intergenic | 25.0% |
! | AAAACATGGTGATTAAGATT+TGG | + | chr3_2:1238989-1239008 | None:intergenic | 25.0% |
!! | TGATTTTATAGCCAGTATAT+GGG | + | chr3_2:1239249-1239268 | None:intergenic | 25.0% |
!! | ATGATTTTATAGCCAGTATA+TGG | + | chr3_2:1239250-1239269 | None:intergenic | 25.0% |
!! | GGCTATAAAATCATTTGTTA+AGG | - | chr3_2:1239256-1239275 | Msa0390420:intron | 25.0% |
!! | GTTTTATAGACTAATTTCGA+TGG | + | chr3_2:1239290-1239309 | None:intergenic | 25.0% |
! | CAACTTTCATAATTGATTGA+TGG | - | chr3_2:1239416-1239435 | Msa0390420:CDS | 25.0% |
! | TGATAGAGATGAAAATGATA+AGG | + | chr3_2:1239705-1239724 | None:intergenic | 25.0% |
! | ACATACACTATTCTTATTGA+TGG | + | chr3_2:1239944-1239963 | None:intergenic | 25.0% |
! | ATAGTGTATGTGTACATATT+TGG | - | chr3_2:1239953-1239972 | Msa0390420:intron | 25.0% |
! | TTAACAAAATTGAAAGACGA+GGG | + | chr3_2:1239986-1240005 | None:intergenic | 25.0% |
! | ATTAACAAAATTGAAAGACG+AGG | + | chr3_2:1239987-1240006 | None:intergenic | 25.0% |
! | GAACTGTAAGTAATTATATC+AGG | - | chr3_2:1240058-1240077 | Msa0390420:intron | 25.0% |
! | ACTTATAACTCTTTAATGGA+TGG | + | chr3_2:1240364-1240383 | None:intergenic | 25.0% |
!! | TTTGCTATAATGATGAAACA+AGG | + | chr3_2:1240406-1240425 | None:intergenic | 25.0% |
!! | ATACTAAAGGTATACACATT+TGG | - | chr3_2:1240478-1240497 | Msa0390420:intron | 25.0% |
! | ACTTACAATGCTTTAATTAG+TGG | + | chr3_2:1240574-1240593 | None:intergenic | 25.0% |
! | CATTGTAAGTGAAAATATCA+GGG | - | chr3_2:1240584-1240603 | Msa0390420:intron | 25.0% |
! | ATTGTAAGTGAAAATATCAG+GGG | - | chr3_2:1240585-1240604 | Msa0390420:intron | 25.0% |
!!! | ATTAATGGATTGTGTAAAGT+TGG | + | chr3_2:1240769-1240788 | None:intergenic | 25.0% |
! | TTTACACAATCCATTAATCA+AGG | - | chr3_2:1240771-1240790 | Msa0390420:intron | 25.0% |
!!! | ATCAATTGTTTCTGTCAATT+GGG | + | chr3_2:1240979-1240998 | None:intergenic | 25.0% |
!!! | ATGGTTTTTTTTTAGAGTTC+TGG | - | chr3_2:1241472-1241491 | Msa0390420:intron | 25.0% |
! | CAAAAGCAAAAAAACATTCT+GGG | + | chr3_2:1241566-1241585 | None:intergenic | 25.0% |
! | ACAAAAGCAAAAAAACATTC+TGG | + | chr3_2:1241567-1241586 | None:intergenic | 25.0% |
! | TATGTTATGTTTGAACATCT+TGG | - | chr3_2:1242825-1242844 | Msa0390420:intron | 25.0% |
!! | ACATTTTGGATTACATAACT+CGG | - | chr3_2:1243174-1243193 | Msa0390420:intron | 25.0% |
! | ACAGTTGGTTGTTTATTTAA+GGG | + | chr3_2:1243414-1243433 | None:intergenic | 25.0% |
! | ATTTAGTAGTCTAAATCCTA+GGG | + | chr3_2:1243461-1243480 | None:intergenic | 25.0% |
! | AATTTAGTAGTCTAAATCCT+AGG | + | chr3_2:1243462-1243481 | None:intergenic | 25.0% |
!! | AAATAGAAACTTTTTGTTGC+TGG | + | chr3_2:1243497-1243516 | None:intergenic | 25.0% |
! | AATAGACTAATTGGTTACAT+TGG | - | chr3_2:1243588-1243607 | Msa0390420:intron | 25.0% |
!! | AAGAAAACTTCTTATTGACT+TGG | + | chr3_2:1243648-1243667 | None:intergenic | 25.0% |
!! | TGTTTTCACACTTTTAACAA+AGG | + | chr3_2:1243836-1243855 | None:intergenic | 25.0% |
! | TTAAGTTTGAATGGAGTTTA+AGG | + | chr3_2:1243921-1243940 | None:intergenic | 25.0% |
! | TGCTAATTACTATATTATCC+CGG | - | chr3_2:1230829-1230848 | Msa0390420:CDS | 25.0% |
! | TTAATGTATCTAAGAGACAA+TGG | - | chr3_2:1231101-1231120 | Msa0390420:CDS | 25.0% |
! | AGACAATGGTTTATTACTAT+TGG | - | chr3_2:1231115-1231134 | Msa0390420:CDS | 25.0% |
TATAGTAATTAGCATCAGCT+CGG | + | chr3_2:1230823-1230842 | None:intergenic | 30.0% | |
GTACTTCTACATTTACCATA+AGG | + | chr3_2:1230878-1230897 | None:intergenic | 30.0% | |
! | TATGGTAAATGTAGAAGTAC+TGG | - | chr3_2:1230878-1230897 | Msa0390420:CDS | 30.0% |
!! | AGTTTTTCCAATACTTGCTA+GGG | + | chr3_2:1230915-1230934 | None:intergenic | 30.0% |
! | AAGTTTTTCCAATACTTGCT+AGG | + | chr3_2:1230916-1230935 | None:intergenic | 30.0% |
TTAACAGGCATAAAAGTAAG+TGG | + | chr3_2:1230980-1230999 | None:intergenic | 30.0% | |
CAATGGTTTATTACTATTGG+TGG | - | chr3_2:1231118-1231137 | Msa0390420:CDS | 30.0% | |
GATGGGAAACCATTAATAAT+TGG | - | chr3_2:1231158-1231177 | Msa0390420:CDS | 30.0% | |
! | GTATGGTGATGATTATAAGT+TGG | - | chr3_2:1231195-1231214 | Msa0390420:CDS | 30.0% |
! | GAGTGTTTGTTGATGAAAAT+GGG | - | chr3_2:1231269-1231288 | Msa0390420:CDS | 30.0% |
TGAAAATGGGAATAAACGTT+TGG | - | chr3_2:1231282-1231301 | Msa0390420:CDS | 30.0% | |
AATAAGGAAACCTAACTTTG+GGG | + | chr3_2:1231425-1231444 | None:intergenic | 30.0% | |
GTAATAAGGAAACCTAACTT+TGG | + | chr3_2:1231427-1231446 | None:intergenic | 30.0% | |
GAGTTTAAAGAGAAGAAGTA+AGG | + | chr3_2:1231859-1231878 | None:intergenic | 30.0% | |
TTAACGAGATCTATACTCTA+GGG | + | chr3_2:1232068-1232087 | None:intergenic | 30.0% | |
GGATCATAAGTCATTTAGTT+TGG | - | chr3_2:1232200-1232219 | Msa0390420:intron | 30.0% | |
ATTGATCATTTGACTCCAAT+AGG | + | chr3_2:1232270-1232289 | None:intergenic | 30.0% | |
GAATCGTTACTACAATTGTA+AGG | + | chr3_2:1232387-1232406 | None:intergenic | 30.0% | |
TGAATGAAAACAACAGACAA+CGG | - | chr3_2:1232439-1232458 | Msa0390420:intron | 30.0% | |
ATACCAGATTCATTCTATAG+TGG | - | chr3_2:1232537-1232556 | Msa0390420:intron | 30.0% | |
ATAATGTAATCCTAGAGTCA+AGG | - | chr3_2:1232714-1232733 | Msa0390420:intron | 30.0% | |
AGTATGTCACTGAATGTATT+AGG | + | chr3_2:1232843-1232862 | None:intergenic | 30.0% | |
TGTTGAGCTATAACACTAAT+AGG | + | chr3_2:1232970-1232989 | None:intergenic | 30.0% | |
ATATATATGGAACAACCTGA+AGG | + | chr3_2:1233246-1233265 | None:intergenic | 30.0% | |
TCATGTCCTATTAGACTATA+AGG | - | chr3_2:1233536-1233555 | Msa0390420:intron | 30.0% | |
TGGATACCTTATAGTCTAAT+AGG | + | chr3_2:1233545-1233564 | None:intergenic | 30.0% | |
! | ATTATGTTTTCTTTGGATGC+TGG | + | chr3_2:1233597-1233616 | None:intergenic | 30.0% |
GATGTTATAGAACATCTAAG+AGG | + | chr3_2:1233698-1233717 | None:intergenic | 30.0% | |
CTAAAAGAAAAAACGCAAAC+CGG | - | chr3_2:1233942-1233961 | Msa0390420:intron | 30.0% | |
TATTTCGGTTTAGATTGATC+CGG | + | chr3_2:1233964-1233983 | None:intergenic | 30.0% | |
CTTCTTATAATAAGAATCGG+AGG | + | chr3_2:1234645-1234664 | None:intergenic | 30.0% | |
ATCATAATAGGAGAGTCATT+TGG | - | chr3_2:1234896-1234915 | Msa0390420:intron | 30.0% | |
GGATCACTATTGTAATATCT+TGG | - | chr3_2:1235119-1235138 | Msa0390420:intron | 30.0% | |
GCTTACATGTTCTTTATCTA+TGG | + | chr3_2:1235263-1235282 | None:intergenic | 30.0% | |
ATGAAGTTTATGGCAATTGA+AGG | + | chr3_2:1235310-1235329 | None:intergenic | 30.0% | |
!! | TTTGTGATGGATGAAGTTTA+TGG | + | chr3_2:1235320-1235339 | None:intergenic | 30.0% |
TATAGTAATTAGCATCAGCT+CGG | + | chr3_2:1230823-1230842 | None:intergenic | 30.0% | |
CTACTTCTACATTTACCATA+AGG | + | chr3_2:1235552-1235571 | None:intergenic | 30.0% | |
TATGGTAAATGTAGAAGTAG+TGG | - | chr3_2:1235552-1235571 | Msa0390420:intron | 30.0% | |
!! | AGTTTTTCCAATACTTGCTA+GGG | + | chr3_2:1230915-1230934 | None:intergenic | 30.0% |
! | AAGTTTTTCCAATACTTGCT+AGG | + | chr3_2:1230916-1230935 | None:intergenic | 30.0% |
!!! | ACACCTTTTTTTGGATTAAC+GGG | + | chr3_2:1235669-1235688 | None:intergenic | 30.0% |
!!! | GACACCTTTTTTTGGATTAA+CGG | + | chr3_2:1235670-1235689 | None:intergenic | 30.0% |
CAATGGTTTATTACTATTGG+TGG | - | chr3_2:1231118-1231137 | Msa0390420:CDS | 30.0% | |
GATGGGAAACCATTAATAAT+TGG | - | chr3_2:1231158-1231177 | Msa0390420:CDS | 30.0% | |
! | GAGTGTTTGTTGATGAAAAT+GGG | - | chr3_2:1231269-1231288 | Msa0390420:CDS | 30.0% |
TGAAAATGGGAATAAACGTT+TGG | - | chr3_2:1231282-1231301 | Msa0390420:CDS | 30.0% | |
CATACTAATGTTTATCATCC+TGG | - | chr3_2:1236146-1236165 | Msa0390420:intron | 30.0% | |
CACCATATAAAACTGTTACT+AGG | - | chr3_2:1236350-1236369 | Msa0390420:intron | 30.0% | |
!! | AGCCTAGTAACAGTTTTATA+TGG | + | chr3_2:1236355-1236374 | None:intergenic | 30.0% |
! | GGATACTTTTAACAATTTGG+GGG | + | chr3_2:1236640-1236659 | None:intergenic | 30.0% |
TCGAGTGTATAAATATGCTT+GGG | + | chr3_2:1236756-1236775 | None:intergenic | 30.0% | |
TTCGAGTGTATAAATATGCT+TGG | + | chr3_2:1236757-1236776 | None:intergenic | 30.0% | |
AGCATATTTATACACTCGAA+AGG | - | chr3_2:1236757-1236776 | Msa0390420:intron | 30.0% | |
CTTTGATACCATGTTGAAAT+TGG | - | chr3_2:1236893-1236912 | Msa0390420:intron | 30.0% | |
TTGATACCATGTTGAAATTG+GGG | - | chr3_2:1236895-1236914 | Msa0390420:intron | 30.0% | |
GAACATGTGTTTATAAATGG+GGG | + | chr3_2:1236963-1236982 | None:intergenic | 30.0% | |
! | ATGCCATATTTTCTCTAACA+TGG | - | chr3_2:1236983-1237002 | Msa0390420:intron | 30.0% |
! | TGCCATATTTTCTCTAACAT+GGG | - | chr3_2:1236984-1237003 | Msa0390420:intron | 30.0% |
CTATTGTTCGTGAACATAAA+TGG | - | chr3_2:1237037-1237056 | Msa0390420:intron | 30.0% | |
!!! | TTGTTGAAATTGGTTTTGTG+TGG | + | chr3_2:1237159-1237178 | None:intergenic | 30.0% |
GAAGTTATGAAATCTTGCTT+AGG | + | chr3_2:1237391-1237410 | None:intergenic | 30.0% | |
CAAGATTTCATAACTTCTCA+TGG | - | chr3_2:1237394-1237413 | Msa0390420:intron | 30.0% | |
!! | GAAATATCTATTTTGGACGA+TGG | + | chr3_2:1237516-1237535 | None:intergenic | 30.0% |
GCATATCATATTCATGAGTA+TGG | + | chr3_2:1237583-1237602 | None:intergenic | 30.0% | |
TGAATATGATATGCTGTCAT+AGG | - | chr3_2:1237589-1237608 | Msa0390420:intron | 30.0% | |
GAATATGATATGCTGTCATA+GGG | - | chr3_2:1237590-1237609 | Msa0390420:intron | 30.0% | |
ATATGATGAATGGTTTAGGA+TGG | + | chr3_2:1237644-1237663 | None:intergenic | 30.0% | |
CATTTCTTGAATATGGTTCA+TGG | + | chr3_2:1237717-1237736 | None:intergenic | 30.0% | |
!!! | AAGTCATTTTGATTTGCGAA+AGG | + | chr3_2:1237805-1237824 | None:intergenic | 30.0% |
!!! | ATCACAAGCAACTTTTTTTG+GGG | + | chr3_2:1237924-1237943 | None:intergenic | 30.0% |
! | AAGCACATTTTGCACATTTT+GGG | + | chr3_2:1237954-1237973 | None:intergenic | 30.0% |
! | AGCATCACAAAAGAATTTTG+AGG | - | chr3_2:1238030-1238049 | Msa0390420:intron | 30.0% |
! | GCATCACAAAAGAATTTTGA+GGG | - | chr3_2:1238031-1238050 | Msa0390420:intron | 30.0% |
! | CATCACAAAAGAATTTTGAG+GGG | - | chr3_2:1238032-1238051 | Msa0390420:intron | 30.0% |
!! | ATCACAAAAGAATTTTGAGG+GGG | - | chr3_2:1238033-1238052 | Msa0390420:intron | 30.0% |
! | TTACTTGTTAGTGAATAGCA+AGG | + | chr3_2:1238072-1238091 | None:intergenic | 30.0% |
TCATCATGATATGTTAGAAG+AGG | + | chr3_2:1238120-1238139 | None:intergenic | 30.0% | |
!!! | GGTAAAGATTGCTTTTTCTT+TGG | - | chr3_2:1238234-1238253 | Msa0390420:intron | 30.0% |
!!! | TGCTTTTTCTTTGGAAGATA+CGG | - | chr3_2:1238243-1238262 | Msa0390420:intron | 30.0% |
! | TCTAGTGAGTATACTTTTAG+AGG | + | chr3_2:1238425-1238444 | None:intergenic | 30.0% |
TTTAGAAATTGCATGCTTGT+AGG | + | chr3_2:1238720-1238739 | None:intergenic | 30.0% | |
AAAAATGAGTAACTAAGGTC+TGG | + | chr3_2:1238781-1238800 | None:intergenic | 30.0% | |
!! | CATTTTAGAAGCCATAAGAT+AGG | - | chr3_2:1238954-1238973 | Msa0390420:intron | 30.0% |
!! | TAAGAAGAAGTATCAGTTGT+AGG | + | chr3_2:1239012-1239031 | None:intergenic | 30.0% |
!! | TAATTTTTCAGTGTTGAGAC+AGG | + | chr3_2:1239057-1239076 | None:intergenic | 30.0% |
! | GATTTTATAGCCAGTATATG+GGG | + | chr3_2:1239248-1239267 | None:intergenic | 30.0% |
ATAGACTAATTTCGATGGAA+CGG | + | chr3_2:1239285-1239304 | None:intergenic | 30.0% | |
AAATGTAGTTCAAAGCAGAA+AGG | - | chr3_2:1239357-1239376 | Msa0390420:CDS | 30.0% | |
AAGATATACGAGAAGGATAA+AGG | - | chr3_2:1239485-1239504 | Msa0390420:CDS | 30.0% | |
! | GATAAAGGTTTTGCTAAACA+CGG | - | chr3_2:1239500-1239519 | Msa0390420:CDS | 30.0% |
TCTATTGTAAGACTGAAACT+AGG | + | chr3_2:1239648-1239667 | None:intergenic | 30.0% | |
TAGAGATGAAAATGATAAGG+CGG | + | chr3_2:1239702-1239721 | None:intergenic | 30.0% | |
ATTGGCTATGTTGTCAAAAA+TGG | + | chr3_2:1239786-1239805 | None:intergenic | 30.0% | |
!! | CTTATTGATGGATTGTGTAA+AGG | + | chr3_2:1239932-1239951 | None:intergenic | 30.0% |
TGGAAGAATATCATATGCTT+TGG | + | chr3_2:1240119-1240138 | None:intergenic | 30.0% | |
GAACTATAAGTTATCACATC+AGG | - | chr3_2:1240163-1240182 | Msa0390420:intron | 30.0% | |
! | CATTTCTTTGAAAAGTCTCA+TGG | - | chr3_2:1240204-1240223 | Msa0390420:intron | 30.0% |
AGCTACAGTATCATGATTAA+TGG | + | chr3_2:1240259-1240278 | None:intergenic | 30.0% | |
ATTCAACACTATGTCTCATA+GGG | + | chr3_2:1240302-1240321 | None:intergenic | 30.0% | |
TATTCAACACTATGTCTCAT+AGG | + | chr3_2:1240303-1240322 | None:intergenic | 30.0% | |
CCTAGTTAAAGAAGTGAATA+AGG | + | chr3_2:1240335-1240354 | None:intergenic | 30.0% | |
CCTTATTCACTTCTTTAACT+AGG | - | chr3_2:1240332-1240351 | Msa0390420:intron | 30.0% | |
GAGTTATAAGTAACAACGTT+AGG | - | chr3_2:1240373-1240392 | Msa0390420:intron | 30.0% | |
TGTGTATACCTTTAGTATAG+TGG | + | chr3_2:1240476-1240495 | None:intergenic | 30.0% | |
! | ATTAGTGGCTTTTGTATTGT+TGG | + | chr3_2:1240559-1240578 | None:intergenic | 30.0% |
GCATTGTAAGTGAAAATATC+AGG | - | chr3_2:1240583-1240602 | Msa0390420:intron | 30.0% | |
AGTTATGGAACCTTGATTAA+TGG | + | chr3_2:1240784-1240803 | None:intergenic | 30.0% | |
CAATTGAACCAAGTTAGTTA+TGG | + | chr3_2:1240799-1240818 | None:intergenic | 30.0% | |
TTCGCAAAGATTCTCAAAAT+GGG | + | chr3_2:1240931-1240950 | None:intergenic | 30.0% | |
TTTCGCAAAGATTCTCAAAA+TGG | + | chr3_2:1240932-1240951 | None:intergenic | 30.0% | |
CGAAAACAGAAAAAGCAAAA+GGG | - | chr3_2:1240947-1240966 | Msa0390420:intron | 30.0% | |
!! | CATCAATTGTTTCTGTCAAT+TGG | + | chr3_2:1240980-1240999 | None:intergenic | 30.0% |
!!! | TTTTTTTTTTGCTTTCGCAC+CGG | - | chr3_2:1241047-1241066 | Msa0390420:intron | 30.0% |
TAAAACTGTAAAAATGGGGT+GGG | + | chr3_2:1241304-1241323 | None:intergenic | 30.0% | |
! | ATATGTGGTTTACGGATTTT+GGG | + | chr3_2:1241359-1241378 | None:intergenic | 30.0% |
TAGACAAGATATGTGGTTTA+CGG | + | chr3_2:1241367-1241386 | None:intergenic | 30.0% | |
CCAAATTTAGACAAGATATG+TGG | + | chr3_2:1241374-1241393 | None:intergenic | 30.0% | |
CCACATATCTTGTCTAAATT+TGG | - | chr3_2:1241371-1241390 | Msa0390420:intron | 30.0% | |
! | TTGGAGTTTTCTTGCTTAAA+AGG | - | chr3_2:1241390-1241409 | Msa0390420:intron | 30.0% |
TTGATTTATGTACACATGCA+TGG | - | chr3_2:1241453-1241472 | Msa0390420:intron | 30.0% | |
CTTCTGTAAGATGCATATTA+GGG | + | chr3_2:1241607-1241626 | None:intergenic | 30.0% | |
TTACTTTAATATGGGAAGCA+AGG | - | chr3_2:1242038-1242057 | Msa0390420:intron | 30.0% | |
! | TGATGATTTTTGTAGTTGTC+TGG | + | chr3_2:1242138-1242157 | None:intergenic | 30.0% |
AGACAACTACAAAAATCATC+AGG | - | chr3_2:1242137-1242156 | Msa0390420:intron | 30.0% | |
GAATTTACTGTTAGAACACA+TGG | - | chr3_2:1242957-1242976 | Msa0390420:intron | 30.0% | |
! | TGTTTTCGGATTACATAATC+CGG | + | chr3_2:1243111-1243130 | None:intergenic | 30.0% |
!!! | CAGTTTTGAATAGATGGTTT+CGG | + | chr3_2:1243230-1243249 | None:intergenic | 30.0% |
! | TTTGTCTGGAATTTAGTTTC+CGG | - | chr3_2:1243294-1243313 | Msa0390420:intron | 30.0% |
TATATAATCCGAACAACTTC+CGG | + | chr3_2:1243316-1243335 | None:intergenic | 30.0% | |
GTTGTTCGGATTATATATTC+CGG | - | chr3_2:1243319-1243338 | Msa0390420:intron | 30.0% | |
! | TTTTTCTTCCAAAAATACCC+CGG | + | chr3_2:1243347-1243366 | None:intergenic | 30.0% |
CAGTTGGTTGTTTATTTAAG+GGG | + | chr3_2:1243413-1243432 | None:intergenic | 30.0% | |
GACAGTTGGTTGTTTATTTA+AGG | + | chr3_2:1243415-1243434 | None:intergenic | 30.0% | |
TAGTTTACCAGAGTAATATG+TGG | + | chr3_2:1243616-1243635 | None:intergenic | 30.0% | |
GAAATGATTTGAACGCATAT+AGG | + | chr3_2:1243676-1243695 | None:intergenic | 30.0% | |
! | AACACATCTCGTCAAAATTT+TGG | - | chr3_2:1243810-1243829 | Msa0390420:intron | 30.0% |
TGTACTATACTCCCTATAAA+TGG | - | chr3_2:1243881-1243900 | Msa0390420:intron | 30.0% | |
TATAGTAATTAGCATCAGCT+CGG | + | chr3_2:1230823-1230842 | None:intergenic | 30.0% | |
CTACTTCTACATTTACCATA+AGG | + | chr3_2:1235552-1235571 | None:intergenic | 30.0% | |
TATGGTAAATGTAGAAGTAG+TGG | - | chr3_2:1235552-1235571 | Msa0390420:intron | 30.0% | |
!! | AGTTTTTCCAATACTTGCTA+GGG | + | chr3_2:1230915-1230934 | None:intergenic | 30.0% |
! | AAGTTTTTCCAATACTTGCT+AGG | + | chr3_2:1230916-1230935 | None:intergenic | 30.0% |
!!! | ACACCTTTTTTTGGATTAAC+GGG | + | chr3_2:1235669-1235688 | None:intergenic | 30.0% |
!!! | GACACCTTTTTTTGGATTAA+CGG | + | chr3_2:1235670-1235689 | None:intergenic | 30.0% |
CAATGGTTTATTACTATTGG+TGG | - | chr3_2:1231118-1231137 | Msa0390420:CDS | 30.0% | |
GATGGGAAACCATTAATAAT+TGG | - | chr3_2:1231158-1231177 | Msa0390420:CDS | 30.0% | |
! | GAGTGTTTGTTGATGAAAAT+GGG | - | chr3_2:1231269-1231288 | Msa0390420:CDS | 30.0% |
TGAAGCTTCAAATGAACAAG+TGG | - | chr3_2:1230775-1230794 | Msa0390420:CDS | 35.0% | |
!! | ATTACTATTGGTGGTGTTGT+TGG | - | chr3_2:1231127-1231146 | Msa0390420:CDS | 35.0% |
TTATTAATGGTTTCCCATCC+CGG | + | chr3_2:1231157-1231176 | None:intergenic | 35.0% | |
TGGTTCAAGATTGAGAAGTA+TGG | - | chr3_2:1231178-1231197 | Msa0390420:CDS | 35.0% | |
GTCTTTCAAGCATATGTGTA+AGG | - | chr3_2:1231240-1231259 | Msa0390420:CDS | 35.0% | |
AAGCATATGTGTAAGGATGT+TGG | - | chr3_2:1231247-1231266 | Msa0390420:CDS | 35.0% | |
! | GGAGTGTTTGTTGATGAAAA+TGG | - | chr3_2:1231268-1231287 | Msa0390420:CDS | 35.0% |
TAAACTAGAGAGAAAGAGAG+TGG | - | chr3_2:1231741-1231760 | Msa0390420:intron | 35.0% | |
AAACTAGAGAGAAAGAGAGT+GGG | - | chr3_2:1231742-1231761 | Msa0390420:intron | 35.0% | |
! | GCTTGTTTAATGGAGCATTA+AGG | - | chr3_2:1231940-1231959 | Msa0390420:intron | 35.0% |
! | TCCAAAAGTCTGTGCTTTTA+TGG | - | chr3_2:1231995-1232014 | Msa0390420:intron | 35.0% |
!! | ACCATAAAAGCACAGACTTT+TGG | + | chr3_2:1231999-1232018 | None:intergenic | 35.0% |
CTTAACGAGATCTATACTCT+AGG | + | chr3_2:1232069-1232088 | None:intergenic | 35.0% | |
GACTTATGATCCCAAGAAAT+AGG | + | chr3_2:1232192-1232211 | None:intergenic | 35.0% | |
!! | ACCATCACTCGTGTTTTTAT+AGG | - | chr3_2:1232226-1232245 | Msa0390420:intron | 35.0% |
GAATGAAAACAACAGACAAC+GGG | - | chr3_2:1232440-1232459 | Msa0390420:intron | 35.0% | |
AGTCCACTATAGAATGAATC+TGG | + | chr3_2:1232543-1232562 | None:intergenic | 35.0% | |
! | AAGGGTACAATGATGCAAAT+AGG | + | chr3_2:1232672-1232691 | None:intergenic | 35.0% |
TGTATTCGCTAGTACTTGAA+GGG | + | chr3_2:1232690-1232709 | None:intergenic | 35.0% | |
ATGTATTCGCTAGTACTTGA+AGG | + | chr3_2:1232691-1232710 | None:intergenic | 35.0% | |
CTTAAAAAGACCTTGACTCT+AGG | + | chr3_2:1232727-1232746 | None:intergenic | 35.0% | |
CATGCTATTGAAAGAGACAA+GGG | + | chr3_2:1232754-1232773 | None:intergenic | 35.0% | |
ACATGCTATTGAAAGAGACA+AGG | + | chr3_2:1232755-1232774 | None:intergenic | 35.0% | |
GAATTACACCATCTCTTCTT+AGG | - | chr3_2:1232939-1232958 | Msa0390420:intron | 35.0% | |
CAAACTCATGAGAAATGACA+TGG | + | chr3_2:1233157-1233176 | None:intergenic | 35.0% | |
CAATGAATCACAAAACCTTC+AGG | - | chr3_2:1233228-1233247 | Msa0390420:intron | 35.0% | |
!! | CTTTTCACATTCATTTGGTG+TGG | - | chr3_2:1233295-1233314 | Msa0390420:intron | 35.0% |
! | GTCTAAAACCTTTGACTACA+AGG | - | chr3_2:1233417-1233436 | Msa0390420:intron | 35.0% |
!! | TGATACGGTTGATAAGTACA+AGG | + | chr3_2:1233447-1233466 | None:intergenic | 35.0% |
GTACTTATCAACCGTATCAT+CGG | - | chr3_2:1233448-1233467 | Msa0390420:intron | 35.0% | |
TACTTATCAACCGTATCATC+GGG | - | chr3_2:1233449-1233468 | Msa0390420:intron | 35.0% | |
GAAACTAAATCCCGATGATA+CGG | + | chr3_2:1233462-1233481 | None:intergenic | 35.0% | |
!!! | ACGTTAGCTTTCCTTTTTTG+CGG | - | chr3_2:1233849-1233868 | Msa0390420:intron | 35.0% |
AGAGACTTAAACCGCAAAAA+AGG | + | chr3_2:1233863-1233882 | None:intergenic | 35.0% | |
GCAAAAAATCGCATTTGGTT+CGG | - | chr3_2:1233984-1234003 | Msa0390420:intron | 35.0% | |
! | TTTTACTGAACTGCATGGTT+TGG | - | chr3_2:1234025-1234044 | Msa0390420:intron | 35.0% |
! | GTTTTTCTTACATTGCGGTT+TGG | + | chr3_2:1234087-1234106 | None:intergenic | 35.0% |
ACGTAGACCAAATTAAAACG+TGG | + | chr3_2:1234302-1234321 | None:intergenic | 35.0% | |
TACGTAGTTGAGAACATTGT+TGG | - | chr3_2:1234317-1234336 | Msa0390420:intron | 35.0% | |
ATCAAACCAATTGGATCTGT+TGG | + | chr3_2:1234461-1234480 | None:intergenic | 35.0% | |
!! | CAGATCCAATTGGTTTGATT+TGG | - | chr3_2:1234462-1234481 | Msa0390420:intron | 35.0% |
!! | CCAATTGGTTTGATTTGGTT+CGG | - | chr3_2:1234467-1234486 | Msa0390420:intron | 35.0% |
!! | GTTTGCAGTTTAGTTTGGTT+CGG | + | chr3_2:1234512-1234531 | None:intergenic | 35.0% |
!!! | GTCATAACTTTTTAAAGCGC+AGG | + | chr3_2:1234811-1234830 | None:intergenic | 35.0% |
TACTGCATATGGTATAAGTC+TGG | + | chr3_2:1235057-1235076 | None:intergenic | 35.0% | |
AATATAGAAACTCACCAGCA+CGG | + | chr3_2:1235099-1235118 | None:intergenic | 35.0% | |
TGAAGCTTCAAATGAACAAG+TGG | - | chr3_2:1230775-1230794 | Msa0390420:CDS | 35.0% | |
!! | TTTTGGATTAACGGGTGTAA+AGG | + | chr3_2:1235661-1235680 | None:intergenic | 35.0% |
ACACCCGTTAATCCAAAAAA+AGG | - | chr3_2:1235663-1235682 | Msa0390420:intron | 35.0% | |
!!! | ACACGAATGACACCTTTTTT+TGG | + | chr3_2:1235678-1235697 | None:intergenic | 35.0% |
!! | ATTACTATTGGTGGTGTTGT+TGG | - | chr3_2:1231127-1231146 | Msa0390420:CDS | 35.0% |
TTATTAATGGTTTCCCATCC+CGG | + | chr3_2:1231157-1231176 | None:intergenic | 35.0% | |
TGGTTCAAGATTGAGAAGTA+TGG | - | chr3_2:1231178-1231197 | Msa0390420:CDS | 35.0% | |
! | GTATGGTGATGCTTATAAGT+TGG | - | chr3_2:1235869-1235888 | Msa0390420:intron | 35.0% |
!! | GTCTTTGAAGCATATGTGTA+AGG | - | chr3_2:1235914-1235933 | Msa0390420:intron | 35.0% |
AAGCATATGTGTAAGGATGT+TGG | - | chr3_2:1231247-1231266 | Msa0390420:CDS | 35.0% | |
! | GGAGTGTTTGTTGATGAAAA+TGG | - | chr3_2:1231268-1231287 | Msa0390420:CDS | 35.0% |
TTATTGGGATCCTCAAAGTT+AGG | - | chr3_2:1236094-1236113 | Msa0390420:intron | 35.0% | |
TATTGGGATCCTCAAAGTTA+GGG | - | chr3_2:1236095-1236114 | Msa0390420:intron | 35.0% | |
AAATATCTCAAATAGGTGCC+TGG | - | chr3_2:1236710-1236729 | Msa0390420:intron | 35.0% | |
ATTTATACACTCGAAAGGCT+AGG | - | chr3_2:1236762-1236781 | Msa0390420:intron | 35.0% | |
AATGATTGCATTGTGGGAAT+TGG | + | chr3_2:1236866-1236885 | None:intergenic | 35.0% | |
TTTCAACATGGTATCAAAGC+CGG | + | chr3_2:1236892-1236911 | None:intergenic | 35.0% | |
ATTAGACCCCAATTTCAACA+TGG | + | chr3_2:1236904-1236923 | None:intergenic | 35.0% | |
CTAATTCATCCTCACAAAAC+CGG | - | chr3_2:1236919-1236938 | Msa0390420:intron | 35.0% | |
GTCCCATGTTAGAGAAAATA+TGG | + | chr3_2:1236989-1237008 | None:intergenic | 35.0% | |
TTGTTCGTGAACATAAATGG+TGG | - | chr3_2:1237040-1237059 | Msa0390420:intron | 35.0% | |
TGTTCGTGAACATAAATGGT+GGG | - | chr3_2:1237041-1237060 | Msa0390420:intron | 35.0% | |
TGCTATCAGGTTTCCATTAT+CGG | + | chr3_2:1237071-1237090 | None:intergenic | 35.0% | |
!! | ATTTTGTTTCGCTTGAATCC+TGG | + | chr3_2:1237220-1237239 | None:intergenic | 35.0% |
AGGATTCAAGCGAAACAAAA+TGG | - | chr3_2:1237219-1237238 | Msa0390420:intron | 35.0% | |
! | TTAGGCTTGCTTCTTATTCA+AGG | + | chr3_2:1237373-1237392 | None:intergenic | 35.0% |
!! | ATTTGATATGCGTTTTGGTG+AGG | + | chr3_2:1237451-1237470 | None:intergenic | 35.0% |
! | CTGTGATTTGATATGCGTTT+TGG | + | chr3_2:1237456-1237475 | None:intergenic | 35.0% |
TATCAAATCACAGTTGTTGC+TGG | - | chr3_2:1237463-1237482 | Msa0390420:intron | 35.0% | |
ACCTTTCAAAAGCTTAGACT+TGG | - | chr3_2:1237758-1237777 | Msa0390420:intron | 35.0% | |
! | TCCAAGTCTAAGCTTTTGAA+AGG | + | chr3_2:1237762-1237781 | None:intergenic | 35.0% |
AAAATGACTTTGCATACCTG+TGG | - | chr3_2:1237815-1237834 | Msa0390420:intron | 35.0% | |
AAATGACTTTGCATACCTGT+GGG | - | chr3_2:1237816-1237835 | Msa0390420:intron | 35.0% | |
TTGAATACTTCATTTCCCAC+AGG | + | chr3_2:1237834-1237853 | None:intergenic | 35.0% | |
! | AAACCATGCACATTTTGCAT+TGG | + | chr3_2:1237894-1237913 | None:intergenic | 35.0% |
! | CAAGCACATTTTGCACATTT+TGG | + | chr3_2:1237955-1237974 | None:intergenic | 35.0% |
AACTATGATAGGTAGTCACT+AGG | + | chr3_2:1238003-1238022 | None:intergenic | 35.0% | |
TTGTTAGTGAATAGCAAGGA+GGG | + | chr3_2:1238068-1238087 | None:intergenic | 35.0% | |
! | GGACATGGTTCTATAGATAT+AGG | + | chr3_2:1238194-1238213 | None:intergenic | 35.0% |
!! | GCTTTTTCTTTGGAAGATAC+GGG | - | chr3_2:1238244-1238263 | Msa0390420:intron | 35.0% |
TTATCCTCTGAATGCATCAA+TGG | + | chr3_2:1238318-1238337 | None:intergenic | 35.0% | |
! | AGGAAGCATGATTCTATTTC+CGG | + | chr3_2:1238700-1238719 | None:intergenic | 35.0% |
CTAGTGACCAAACAAATTCA+AGG | - | chr3_2:1238755-1238774 | Msa0390420:intron | 35.0% | |
GTCTCTATTGTTTACAACTC+AGG | - | chr3_2:1238828-1238847 | Msa0390420:intron | 35.0% | |
GTATCAGTTGTAGGAAAACA+TGG | + | chr3_2:1239003-1239022 | None:intergenic | 35.0% | |
AGTTGACTATGAAGCTGAAA+TGG | - | chr3_2:1239160-1239179 | Msa0390420:intron | 35.0% | |
GTTGACTATGAAGCTGAAAT+GGG | - | chr3_2:1239161-1239180 | Msa0390420:intron | 35.0% | |
TTGACTATGAAGCTGAAATG+GGG | - | chr3_2:1239162-1239181 | Msa0390420:intron | 35.0% | |
ATCCAAATCTGCAGATAAGA+GGG | - | chr3_2:1239389-1239408 | Msa0390420:CDS | 35.0% | |
GAAATGGAAGATATACGAGA+AGG | - | chr3_2:1239478-1239497 | Msa0390420:CDS | 35.0% | |
CTTCGTCAAATGATTACAAG+AGG | + | chr3_2:1239671-1239690 | None:intergenic | 35.0% | |
ATTTCATAAGTTACAGCGTC+TGG | - | chr3_2:1239743-1239762 | Msa0390420:CDS | 35.0% | |
CATATACCGTTATGATCCAT+GGG | + | chr3_2:1239838-1239857 | None:intergenic | 35.0% | |
ACATATACCGTTATGATCCA+TGG | + | chr3_2:1239839-1239858 | None:intergenic | 35.0% | |
! | TTTGAGGATCTTTTGGTCAA+AGG | + | chr3_2:1239881-1239900 | None:intergenic | 35.0% |
!! | GGATGCACGAAATATTTTTG+AGG | + | chr3_2:1239897-1239916 | None:intergenic | 35.0% |
!! | ATTGATGGATTGTGTAAAGG+TGG | + | chr3_2:1239929-1239948 | None:intergenic | 35.0% |
!! | AAAAACCATCAGGTTGAGAA+AGG | + | chr3_2:1240019-1240038 | None:intergenic | 35.0% |
TGCTTTATGCAAAAACCATC+AGG | + | chr3_2:1240029-1240048 | None:intergenic | 35.0% | |
ATTTGCACAATCCATCGATA+AGG | - | chr3_2:1240140-1240159 | Msa0390420:intron | 35.0% | |
TTTGCACAATCCATCGATAA+GGG | - | chr3_2:1240141-1240160 | Msa0390420:intron | 35.0% | |
ACTTATAGTTCCCTTATCGA+TGG | + | chr3_2:1240154-1240173 | None:intergenic | 35.0% | |
TTCAACACTATGTCTCATAG+GGG | + | chr3_2:1240301-1240320 | None:intergenic | 35.0% | |
!!! | GTTGATGGATTTTGTAAGGA+AGG | + | chr3_2:1240454-1240473 | None:intergenic | 35.0% |
!!! | AGTGGTTGATGGATTTTGTA+AGG | + | chr3_2:1240458-1240477 | None:intergenic | 35.0% |
TCCATCAACCACTATACTAA+AGG | - | chr3_2:1240465-1240484 | Msa0390420:intron | 35.0% | |
ACCTTTAGTATAGTGGTTGA+TGG | + | chr3_2:1240469-1240488 | None:intergenic | 35.0% | |
TCAAGGTTCCATAACTAACT+TGG | - | chr3_2:1240788-1240807 | Msa0390420:intron | 35.0% | |
ATTGCACTTTCATGATAAGG+TGG | + | chr3_2:1240836-1240855 | None:intergenic | 35.0% | |
AGCATTGCACTTTCATGATA+AGG | + | chr3_2:1240839-1240858 | None:intergenic | 35.0% | |
TGTAGTGAAGGTTATGGTAT+TGG | - | chr3_2:1240897-1240916 | Msa0390420:intron | 35.0% | |
GTAGTGAAGGTTATGGTATT+GGG | - | chr3_2:1240898-1240917 | Msa0390420:intron | 35.0% | |
GCGAAAACAGAAAAAGCAAA+AGG | - | chr3_2:1240946-1240965 | Msa0390420:intron | 35.0% | |
GGTGCGAAAGCAAAAAAAAA+AGG | + | chr3_2:1241048-1241067 | None:intergenic | 35.0% | |
TACCTAACTAAACCTTGCTT+GGG | + | chr3_2:1241209-1241228 | None:intergenic | 35.0% | |
AAAACTGTAAAAATGGGGTG+GGG | + | chr3_2:1241303-1241322 | None:intergenic | 35.0% | |
GTAAAACTGTAAAAATGGGG+TGG | + | chr3_2:1241305-1241324 | None:intergenic | 35.0% | |
ATGTAGAGAGTGAGAAAGAA+TGG | + | chr3_2:1241333-1241352 | None:intergenic | 35.0% | |
! | GATATGTGGTTTACGGATTT+TGG | + | chr3_2:1241360-1241379 | None:intergenic | 35.0% |
TAATGTTGTAGTCCGACAAT+TGG | - | chr3_2:1241528-1241547 | Msa0390420:intron | 35.0% | |
AAAAACATTCTGGGTGTTTC+CGG | + | chr3_2:1241557-1241576 | None:intergenic | 35.0% | |
CCTTCTGTAAGATGCATATT+AGG | + | chr3_2:1241608-1241627 | None:intergenic | 35.0% | |
CCTAATATGCATCTTACAGA+AGG | - | chr3_2:1241605-1241624 | Msa0390420:intron | 35.0% | |
!! | ATGCTTTTTATACCACTGTC+TGG | - | chr3_2:1242102-1242121 | Msa0390420:intron | 35.0% |
! | TTTTATACCACTGTCTGGTT+TGG | - | chr3_2:1242107-1242126 | Msa0390420:intron | 35.0% |
! | TTTATACCACTGTCTGGTTT+GGG | - | chr3_2:1242108-1242127 | Msa0390420:intron | 35.0% |
CAAAAATCATCAGGATATGC+TGG | - | chr3_2:1242146-1242165 | Msa0390420:intron | 35.0% | |
! | TGTTGAAAGAGGTACATGAT+GGG | - | chr3_2:1242702-1242721 | Msa0390420:intron | 35.0% |
TCTAAACAAACATACCATGC+CGG | + | chr3_2:1242986-1243005 | None:intergenic | 35.0% | |
!! | AGCTAAATGCTCTAAAACAG+AGG | - | chr3_2:1243010-1243029 | Msa0390420:intron | 35.0% |
CTGTTGAAAGTCAACAAATG+GGG | + | chr3_2:1243144-1243163 | None:intergenic | 35.0% | |
CCTGTTGAAAGTCAACAAAT+GGG | + | chr3_2:1243145-1243164 | None:intergenic | 35.0% | |
!! | CCATTTGTTGACTTTCAACA+GGG | - | chr3_2:1243143-1243162 | Msa0390420:intron | 35.0% |
! | ACAGGGTGATTTACACATTT+TGG | - | chr3_2:1243160-1243179 | Msa0390420:intron | 35.0% |
CGGAGTTTGTACAAAATTTC+CGG | - | chr3_2:1243194-1243213 | Msa0390420:intron | 35.0% | |
CGAAACCATCTATTCAAAAC+TGG | - | chr3_2:1243228-1243247 | Msa0390420:intron | 35.0% | |
!!! | TGATGCCAGTTTTGAATAGA+TGG | + | chr3_2:1243236-1243255 | None:intergenic | 35.0% |
CTAAATTCCAGACAAATTCG+TGG | + | chr3_2:1243290-1243309 | None:intergenic | 35.0% | |
! | TTTAGTTTCCGGAAGTTGTT+CGG | - | chr3_2:1243305-1243324 | Msa0390420:intron | 35.0% |
! | TTTTCTTCCAAAAATACCCC+GGG | + | chr3_2:1243346-1243365 | None:intergenic | 35.0% |
AAAAAAAAATAGAGTGCGCG+AGG | - | chr3_2:1243362-1243381 | Msa0390420:intron | 35.0% | |
TGTCTCTAATAGAAATACGC+AGG | - | chr3_2:1243551-1243570 | Msa0390420:intron | 35.0% | |
TCACAAGGGAATAGACTAAT+TGG | - | chr3_2:1243579-1243598 | Msa0390420:intron | 35.0% | |
ATTGGTACCACATATTACTC+TGG | - | chr3_2:1243606-1243625 | Msa0390420:intron | 35.0% | |
! | AAGACTCACCGGATTTTTAA+AGG | + | chr3_2:1243758-1243777 | None:intergenic | 35.0% |
AAATCCGGTGAGTCTTTAAA+TGG | - | chr3_2:1243762-1243781 | Msa0390420:intron | 35.0% | |
TTGACGAGATGTGTTACAAT+TGG | + | chr3_2:1243805-1243824 | None:intergenic | 35.0% | |
TGGAGTTTAAGGAAATCGAA+GGG | + | chr3_2:1243910-1243929 | None:intergenic | 35.0% | |
ATGGAGTTTAAGGAAATCGA+AGG | + | chr3_2:1243911-1243930 | None:intergenic | 35.0% | |
AAGTGGTTGTGAACTTAAGA+TGG | + | chr3_2:1244005-1244024 | None:intergenic | 35.0% | |
TTAAGTTCACAACCACTTCT+TGG | - | chr3_2:1244007-1244026 | Msa0390420:CDS | 35.0% | |
TGAAGCTTCAAATGATCAAG+TGG | - | chr3_2:1244036-1244055 | Msa0390420:CDS | 35.0% | |
!! | TTTTGGATTAACGGGTGTAA+AGG | + | chr3_2:1235661-1235680 | None:intergenic | 35.0% |
ACACCCGTTAATCCAAAAAA+AGG | - | chr3_2:1235663-1235682 | Msa0390420:intron | 35.0% | |
!!! | ACACGAATGACACCTTTTTT+TGG | + | chr3_2:1235678-1235697 | None:intergenic | 35.0% |
!! | ATTACTATTGGTGGTGTTGT+TGG | - | chr3_2:1231127-1231146 | Msa0390420:CDS | 35.0% |
TTATTAATGGTTTCCCATCC+CGG | + | chr3_2:1231157-1231176 | None:intergenic | 35.0% | |
TGGTTCAAGATTGAGAAGTA+TGG | - | chr3_2:1231178-1231197 | Msa0390420:CDS | 35.0% | |
! | GTATGGTGATGCTTATAAGT+TGG | - | chr3_2:1235869-1235888 | Msa0390420:intron | 35.0% |
GTCTTTCAAGCATATGTGTA+AGG | - | chr3_2:1231240-1231259 | Msa0390420:CDS | 35.0% | |
AAGCATATGTGTAAGGATGT+TGG | - | chr3_2:1231247-1231266 | Msa0390420:CDS | 35.0% | |
! | GGAGTGTTTGTTGATGAAAA+TGG | - | chr3_2:1231268-1231287 | Msa0390420:CDS | 35.0% |
TGAAAATGGGAATAAGCGTT+TGG | - | chr3_2:1244543-1244562 | Msa0390420:CDS | 35.0% | |
GAACAAGTGGTTGACACATT+AGG | - | chr3_2:1230788-1230807 | Msa0390420:CDS | 40.0% | |
CAACAACCACAACATCAAGA+GGG | + | chr3_2:1230940-1230959 | None:intergenic | 40.0% | |
TCAACAACCACAACATCAAG+AGG | + | chr3_2:1230941-1230960 | None:intergenic | 40.0% | |
TATGCCTGTTAACCCTAAGA+AGG | - | chr3_2:1230988-1231007 | Msa0390420:CDS | 40.0% | |
ATGCCTGTTAACCCTAAGAA+GGG | - | chr3_2:1230989-1231008 | Msa0390420:CDS | 40.0% | |
CACGAATAACACCCTTCTTA+GGG | + | chr3_2:1231003-1231022 | None:intergenic | 40.0% | |
ACACGAATAACACCCTTCTT+AGG | + | chr3_2:1231004-1231023 | None:intergenic | 40.0% | |
AACTTGTCTACACCATTCCA+TGG | - | chr3_2:1231060-1231079 | Msa0390420:CDS | 40.0% | |
TTATTGGGATCCCCAAAGTT+AGG | - | chr3_2:1231412-1231431 | Msa0390420:intron | 40.0% | |
ACCACTAACACAACATGCTT+CGG | - | chr3_2:1231562-1231581 | Msa0390420:intron | 40.0% | |
! | CTCATGTGTTTGTTTGGGTT+CGG | - | chr3_2:1231876-1231895 | Msa0390420:intron | 40.0% |
! | AGATCTATACTCTAGGGAAG+TGG | + | chr3_2:1232062-1232081 | None:intergenic | 40.0% |
GCCTATAAAAACACGAGTGA+TGG | + | chr3_2:1232230-1232249 | None:intergenic | 40.0% | |
CTAGCTACTCTCTTATCGAA+TGG | + | chr3_2:1232328-1232347 | None:intergenic | 40.0% | |
ACACATTGAGTATCCATGCA+TGG | + | chr3_2:1232610-1232629 | None:intergenic | 40.0% | |
ATACTCAATGTGTGTAGCCA+CGG | - | chr3_2:1232617-1232636 | Msa0390420:intron | 40.0% | |
AATGATTCATATGCAACCCG+TGG | + | chr3_2:1232637-1232656 | None:intergenic | 40.0% | |
ATTCTTCTCACTCGATCTAC+TGG | - | chr3_2:1232777-1232796 | Msa0390420:intron | 40.0% | |
TTTCACACCGTCTCTAATGT+CGG | - | chr3_2:1232898-1232917 | Msa0390420:intron | 40.0% | |
AGGAAAGACCTAAGAAGAGA+TGG | + | chr3_2:1232950-1232969 | None:intergenic | 40.0% | |
GTCTAATAGGACATGACACT+TGG | + | chr3_2:1233532-1233551 | None:intergenic | 40.0% | |
!! | GCATTTGGTTCGGATGTATT+CGG | - | chr3_2:1233994-1234013 | Msa0390420:intron | 40.0% |
!! | TTCTTACATTGCGGTTTGGT+TGG | + | chr3_2:1234083-1234102 | None:intergenic | 40.0% |
CCGAACCAAATCAAACCAAT+TGG | + | chr3_2:1234470-1234489 | None:intergenic | 40.0% | |
!!! | GTTTACTTTTGGGGTGTTTG+CGG | + | chr3_2:1234589-1234608 | None:intergenic | 40.0% |
GTTAACCAAAGCGAGTACAT+TGG | - | chr3_2:1234980-1234999 | Msa0390420:intron | 40.0% | |
AAGTACCAATGTACTCGCTT+TGG | + | chr3_2:1234988-1235007 | None:intergenic | 40.0% | |
TAAGAAGAAATAACCCGTGC+TGG | - | chr3_2:1235082-1235101 | Msa0390420:intron | 40.0% | |
ATATAGAAACTCACCAGCAC+GGG | + | chr3_2:1235098-1235117 | None:intergenic | 40.0% | |
! | GTGCTGGTGAGTTTCTATAT+TGG | - | chr3_2:1235098-1235117 | Msa0390420:intron | 40.0% |
ATTGGCATGTTGTTGAGCTT+AGG | + | chr3_2:1235181-1235200 | None:intergenic | 40.0% | |
TGCTCAAGAAGGCAAAAAGA+AGG | + | chr3_2:1235407-1235426 | None:intergenic | 40.0% | |
GAACAAGTGGTTGACACATT+AGG | - | chr3_2:1230788-1230807 | Msa0390420:CDS | 40.0% | |
CAACAACCACAACATCAAGA+GGG | + | chr3_2:1230940-1230959 | None:intergenic | 40.0% | |
TCAACAACCACAACATCAAG+AGG | + | chr3_2:1230941-1230960 | None:intergenic | 40.0% | |
! | TTAACGGGTGTAAAGGTTAG+TGG | + | chr3_2:1235654-1235673 | None:intergenic | 40.0% |
TACTTGTCTACACCATTCCA+TGG | - | chr3_2:1235734-1235753 | Msa0390420:intron | 40.0% | |
AACAAGGAACCCTAACTTTG+AGG | + | chr3_2:1236107-1236126 | None:intergenic | 40.0% | |
CATTCTTAAGGATGTCAGTG+AGG | + | chr3_2:1236304-1236323 | None:intergenic | 40.0% | |
CTCACTGACATCCTTAAGAA+TGG | - | chr3_2:1236302-1236321 | Msa0390420:intron | 40.0% | |
CATTTGGGTGTCCATTCTTA+AGG | + | chr3_2:1236316-1236335 | None:intergenic | 40.0% | |
TAAGAATGGACACCCAAATG+AGG | - | chr3_2:1236316-1236335 | Msa0390420:intron | 40.0% | |
ACTGTTACTAGGCTAACAAG+AGG | - | chr3_2:1236361-1236380 | Msa0390420:intron | 40.0% | |
CTGTTACTAGGCTAACAAGA+GGG | - | chr3_2:1236362-1236381 | Msa0390420:intron | 40.0% | |
GCAGCAATTACAAAGCAAAC+AGG | - | chr3_2:1236384-1236403 | Msa0390420:intron | 40.0% | |
GAGATCCAAGCTTATTTACC+AGG | + | chr3_2:1236731-1236750 | None:intergenic | 40.0% | |
CGGGTTAATGATTGCATTGT+GGG | + | chr3_2:1236872-1236891 | None:intergenic | 40.0% | |
CCACAATGCAATCATTAACC+CGG | - | chr3_2:1236870-1236889 | Msa0390420:intron | 40.0% | |
TTCAACATGGTATCAAAGCC+GGG | + | chr3_2:1236891-1236910 | None:intergenic | 40.0% | |
!! | AACAATAGTGCTGGTCATGA+GGG | + | chr3_2:1237025-1237044 | None:intergenic | 40.0% |
ATGTTCACGAACAATAGTGC+TGG | + | chr3_2:1237034-1237053 | None:intergenic | 40.0% | |
!! | GATAATGGAAACCTGATAGC+AGG | - | chr3_2:1237070-1237089 | Msa0390420:intron | 40.0% |
!!! | TGGTTTTGTGTGGTTGTGTT+AGG | + | chr3_2:1237149-1237168 | None:intergenic | 40.0% |
!! | CATGCACATTTTGCATTGGT+GGG | + | chr3_2:1237890-1237909 | None:intergenic | 40.0% |
CTTGTTAGTGAATAGCAAGG+AGG | + | chr3_2:1238069-1238088 | None:intergenic | 40.0% | |
TTTACCTGCCTCTTGAAGTT+CGG | + | chr3_2:1238220-1238239 | None:intergenic | 40.0% | |
TTTGGAAGATACGGGTGAAA+AGG | - | chr3_2:1238252-1238271 | Msa0390420:intron | 40.0% | |
TTGCCCATTAAACGACACAA+GGG | - | chr3_2:1238291-1238310 | Msa0390420:intron | 40.0% | |
ATGCAGCAAAACAGATTCTG+CGG | - | chr3_2:1239082-1239101 | Msa0390420:intron | 40.0% | |
! | CTAGCTCTCAACTTCTTTCA+AGG | - | chr3_2:1239129-1239148 | Msa0390420:intron | 40.0% |
TGCTGCATAGTGAGTATCTA+AGG | + | chr3_2:1239188-1239207 | None:intergenic | 40.0% | |
CATCCAAATCTGCAGATAAG+AGG | - | chr3_2:1239388-1239407 | Msa0390420:CDS | 40.0% | |
GATTGATGGAACTCTCATTG+AGG | - | chr3_2:1239430-1239449 | Msa0390420:CDS | 40.0% | |
! | ATCCATGGGTTTTGCAACAA+CGG | + | chr3_2:1239824-1239843 | None:intergenic | 40.0% |
GCAAAACCCATGGATCATAA+CGG | - | chr3_2:1239829-1239848 | Msa0390420:intron | 40.0% | |
CAATTCCTTTCTCAACCTGA+TGG | - | chr3_2:1240011-1240030 | Msa0390420:intron | 40.0% | |
!! | ATCGATGGATTGTGCAAATC+TGG | + | chr3_2:1240139-1240158 | None:intergenic | 40.0% |
!! | ACGACGAGTTGATGGAAAAT+TGG | + | chr3_2:1240719-1240738 | None:intergenic | 40.0% |
AACTCGTCGTAGCAATTCAA+GGG | - | chr3_2:1240729-1240748 | Msa0390420:intron | 40.0% | |
ACCTTCACTACACTCATCAA+GGG | + | chr3_2:1240889-1240908 | None:intergenic | 40.0% | |
AACCTTCACTACACTCATCA+AGG | + | chr3_2:1240890-1240909 | None:intergenic | 40.0% | |
GATGAGTGTAGTGAAGGTTA+TGG | - | chr3_2:1240891-1240910 | Msa0390420:intron | 40.0% | |
GTACCTAACTAAACCTTGCT+TGG | + | chr3_2:1241210-1241229 | None:intergenic | 40.0% | |
AAACTGTAAAAATGGGGTGG+GGG | + | chr3_2:1241302-1241321 | None:intergenic | 40.0% | |
GTTTGACAAGGGTTGAAATG+CGG | + | chr3_2:1241417-1241436 | None:intergenic | 40.0% | |
TCAACCCTTGTCAAACATCA+TGG | - | chr3_2:1241421-1241440 | Msa0390420:intron | 40.0% | |
CCTTCCATGATGTTTGACAA+GGG | + | chr3_2:1241428-1241447 | None:intergenic | 40.0% | |
ACCTTCCATGATGTTTGACA+AGG | + | chr3_2:1241429-1241448 | None:intergenic | 40.0% | |
ATAGTCCGGAAAACGAAATC+CGG | + | chr3_2:1241509-1241528 | None:intergenic | 40.0% | |
CGGACTACAACATTATAGTC+CGG | + | chr3_2:1241523-1241542 | None:intergenic | 40.0% | |
TGTTTCCGGATTCCAATTGT+CGG | + | chr3_2:1241543-1241562 | None:intergenic | 40.0% | |
ATCTAAGCCATCCAGAGAAA+AGG | + | chr3_2:1242239-1242258 | None:intergenic | 40.0% | |
TTCTCTGGATGGCTTAGATA+CGG | - | chr3_2:1242240-1242259 | Msa0390420:intron | 40.0% | |
ACCGCACAGTGACATATATA+CGG | - | chr3_2:1242265-1242284 | Msa0390420:intron | 40.0% | |
TCCGTATATATGTCACTGTG+CGG | + | chr3_2:1242269-1242288 | None:intergenic | 40.0% | |
ACAGTGACATATATACGGAG+CGG | - | chr3_2:1242270-1242289 | Msa0390420:intron | 40.0% | |
! | GATCAAGAGCATGTTGAAAG+CGG | + | chr3_2:1242385-1242404 | None:intergenic | 40.0% |
ACGTGCAATTCATTGCATTG+AGG | - | chr3_2:1242433-1242452 | Msa0390420:intron | 40.0% | |
!! | ATACATCGAGTGGTTTTACC+AGG | - | chr3_2:1242466-1242485 | Msa0390420:intron | 40.0% |
ATGTCAAGAAGAATCATGCG+TGG | + | chr3_2:1242500-1242519 | None:intergenic | 40.0% | |
CATGATTCTTCTTGACATGC+CGG | - | chr3_2:1242502-1242521 | Msa0390420:intron | 40.0% | |
CATGGGTACTTACATCTTAG+CGG | - | chr3_2:1242588-1242607 | Msa0390420:intron | 40.0% | |
TTTGGAGGATGTGTTGAAAG+AGG | - | chr3_2:1242691-1242710 | Msa0390420:intron | 40.0% | |
! | GTGTTGAAAGAGGTACATGA+TGG | - | chr3_2:1242701-1242720 | Msa0390420:intron | 40.0% |
CAAACCCTAATAACTACACC+CGG | + | chr3_2:1242797-1242816 | None:intergenic | 40.0% | |
GCAGTTTGGATTACACAATC+CGG | - | chr3_2:1243070-1243089 | Msa0390420:intron | 40.0% | |
! | GGGGTGAGAAATGATGTTTT+CGG | + | chr3_2:1243125-1243144 | None:intergenic | 40.0% |
!! | CCCATTTGTTGACTTTCAAC+AGG | - | chr3_2:1243142-1243161 | Msa0390420:intron | 40.0% |
CCCTGTTGAAAGTCAACAAA+TGG | + | chr3_2:1243146-1243165 | None:intergenic | 40.0% | |
TGGTTTCGGAGAACATAATC+CGG | + | chr3_2:1243216-1243235 | None:intergenic | 40.0% | |
! | CCAGACAAATTCGTGGATTT+TGG | + | chr3_2:1243283-1243302 | None:intergenic | 40.0% |
CCAAAATCCACGAATTTGTC+TGG | - | chr3_2:1243280-1243299 | Msa0390420:intron | 40.0% | |
CTGAGTACAATTCAGACAGT+TGG | + | chr3_2:1243429-1243448 | None:intergenic | 40.0% | |
TACTCAGAAAAACCAACCCT+AGG | - | chr3_2:1243442-1243461 | Msa0390420:intron | 40.0% | |
AGTAGTCTAAATCCTAGGGT+TGG | + | chr3_2:1243457-1243476 | None:intergenic | 40.0% | |
AATACGCAGGCTTAATCACA+AGG | - | chr3_2:1243564-1243583 | Msa0390420:intron | 40.0% | |
ATACGCAGGCTTAATCACAA+GGG | - | chr3_2:1243565-1243584 | Msa0390420:intron | 40.0% | |
GAGTCCATTTAAAGACTCAC+CGG | + | chr3_2:1243769-1243788 | None:intergenic | 40.0% | |
!! | TCGAAGGGCATCCATTTATA+GGG | + | chr3_2:1243895-1243914 | None:intergenic | 40.0% |
!! | ATCGAAGGGCATCCATTTAT+AGG | + | chr3_2:1243896-1243915 | None:intergenic | 40.0% |
CAACAACCACAACATCAAGA+GGG | + | chr3_2:1230940-1230959 | None:intergenic | 40.0% | |
TCAACAACCACAACATCAAG+AGG | + | chr3_2:1230941-1230960 | None:intergenic | 40.0% | |
! | TTAACGGGTGTAAAGGTTAG+TGG | + | chr3_2:1235654-1235673 | None:intergenic | 40.0% |
TACTTGTCTACACCATTCCA+TGG | - | chr3_2:1235734-1235753 | Msa0390420:intron | 40.0% | |
TGCTCAAGAAGGCAAAGAGA+AGG | + | chr3_2:1230733-1230752 | None:intergenic | 45.0% | |
AAGTGGTTGTGTGCTCAAGA+AGG | + | chr3_2:1230744-1230763 | None:intergenic | 45.0% | |
TTGAGCACACAACCACTTCT+TGG | - | chr3_2:1230746-1230765 | Msa0390420:CDS | 45.0% | |
ACCTGTGAATGGGTATAACC+GGG | + | chr3_2:1230850-1230869 | None:intergenic | 45.0% | |
CACCTGTGAATGGGTATAAC+CGG | + | chr3_2:1230851-1230870 | None:intergenic | 45.0% | |
GTTATACCCATTCACAGGTG+TGG | - | chr3_2:1230851-1230870 | Msa0390420:CDS | 45.0% | |
TAAGGTCCACACCTGTGAAT+GGG | + | chr3_2:1230860-1230879 | None:intergenic | 45.0% | |
ATAAGGTCCACACCTGTGAA+TGG | + | chr3_2:1230861-1230880 | None:intergenic | 45.0% | |
ATTCACAGGTGTGGACCTTA+TGG | - | chr3_2:1230860-1230879 | Msa0390420:CDS | 45.0% | |
AGTCTTGCCCTAGCAAGTAT+TGG | - | chr3_2:1230905-1230924 | Msa0390420:CDS | 45.0% | |
AACTTGCCCTCTTGATGTTG+TGG | - | chr3_2:1230931-1230950 | Msa0390420:CDS | 45.0% | |
ACACCCTTCTTAGGGTTAAC+AGG | + | chr3_2:1230995-1231014 | None:intergenic | 45.0% | |
!! | TGGTGGTGTTGTTGGAAATC+CGG | - | chr3_2:1231135-1231154 | Msa0390420:CDS | 45.0% |
TGTTGTTGGAAATCCGGGAT+GGG | - | chr3_2:1231141-1231160 | Msa0390420:CDS | 45.0% | |
TGAAAGACTGCACCACACTA+GGG | + | chr3_2:1231228-1231247 | None:intergenic | 45.0% | |
TTGAAAGACTGCACCACACT+AGG | + | chr3_2:1231229-1231248 | None:intergenic | 45.0% | |
TCCGAAGCATGTTGTGTTAG+TGG | + | chr3_2:1231566-1231585 | None:intergenic | 45.0% | |
! | TCTGTGCTTTTATGGTCTGC+AGG | - | chr3_2:1232003-1232022 | Msa0390420:intron | 45.0% |
! | CTAGAGAAGCATGATTCCTG+CGG | + | chr3_2:1232119-1232138 | None:intergenic | 45.0% |
TACTCAATGTGTGTAGCCAC+GGG | - | chr3_2:1232618-1232637 | Msa0390420:intron | 45.0% | |
TCCCACGACTTATGCAATGT+CGG | - | chr3_2:1232816-1232835 | Msa0390420:intron | 45.0% | |
TTCACACCGTCTCTAATGTC+GGG | - | chr3_2:1232899-1232918 | Msa0390420:intron | 45.0% | |
ATTAGGCCCGACATTAGAGA+CGG | + | chr3_2:1232908-1232927 | None:intergenic | 45.0% | |
AAGGTTCGCCTTGTAGTCAA+AGG | + | chr3_2:1233428-1233447 | None:intergenic | 45.0% | |
CCTCACGATTTCAAGCCAAT+AGG | + | chr3_2:1233506-1233525 | None:intergenic | 45.0% | |
!! | CCTATTGGCTTGAAATCGTG+AGG | - | chr3_2:1233503-1233522 | Msa0390420:intron | 45.0% |
!! | CTGAACTGCATGGTTTGGTT+CGG | - | chr3_2:1234030-1234049 | Msa0390420:intron | 45.0% |
ATCGCACCAACAGATCCAAT+TGG | - | chr3_2:1234452-1234471 | Msa0390420:intron | 45.0% | |
AAGTGGTTGTGTGCTCAAGA+AGG | + | chr3_2:1230744-1230763 | None:intergenic | 45.0% | |
TTGAGCACACAACCACTTCT+TGG | - | chr3_2:1230746-1230765 | Msa0390420:CDS | 45.0% | |
ACCTGTGAATGGGTATAACC+GGG | + | chr3_2:1230850-1230869 | None:intergenic | 45.0% | |
CACCTGTGAATGGGTATAAC+CGG | + | chr3_2:1230851-1230870 | None:intergenic | 45.0% | |
GTTATACCCATTCACAGGTG+TGG | - | chr3_2:1230851-1230870 | Msa0390420:CDS | 45.0% | |
TAAGGTCCACACCTGTGAAT+GGG | + | chr3_2:1230860-1230879 | None:intergenic | 45.0% | |
ATAAGGTCCACACCTGTGAA+TGG | + | chr3_2:1230861-1230880 | None:intergenic | 45.0% | |
ATTCACAGGTGTGGACCTTA+TGG | - | chr3_2:1230860-1230879 | Msa0390420:CDS | 45.0% | |
AGTCTTGCCCTAGCAAGTAT+TGG | - | chr3_2:1230905-1230924 | Msa0390420:CDS | 45.0% | |
AACTTGCCCTCTTGATGTTG+TGG | - | chr3_2:1230931-1230950 | Msa0390420:CDS | 45.0% | |
!! | TGGTGGTGTTGTTGGAAATC+CGG | - | chr3_2:1231135-1231154 | Msa0390420:CDS | 45.0% |
TGTTGTTGGAAATCCGGGAT+GGG | - | chr3_2:1231141-1231160 | Msa0390420:CDS | 45.0% | |
TCAAAGACTGCACCACACTA+GGG | + | chr3_2:1235902-1235921 | None:intergenic | 45.0% | |
TTCAAAGACTGCACCACACT+AGG | + | chr3_2:1235903-1235922 | None:intergenic | 45.0% | |
GTCAGTGAGGTGATCTTGTT+TGG | + | chr3_2:1236291-1236310 | None:intergenic | 45.0% | |
TGATGATCCTAGAGCAACAG+AGG | + | chr3_2:1236488-1236507 | None:intergenic | 45.0% | |
GAGATATAACTGAGCCACAG+AGG | - | chr3_2:1236593-1236612 | Msa0390420:intron | 45.0% | |
AACAATTTGGGGGCCTTTGT+AGG | + | chr3_2:1236630-1236649 | None:intergenic | 45.0% | |
AGGTGCCTGGTAAATAAGCT+TGG | - | chr3_2:1236723-1236742 | Msa0390420:intron | 45.0% | |
GCTAGGAAACTGAGCAATGT+GGG | - | chr3_2:1236779-1236798 | Msa0390420:intron | 45.0% | |
! | GTAAGGGTGTGTGTTGAAGT+TGG | + | chr3_2:1236835-1236854 | None:intergenic | 45.0% |
GGAATTGGACCTAGGTGTAA+GGG | + | chr3_2:1236851-1236870 | None:intergenic | 45.0% | |
CCGGGTTAATGATTGCATTG+TGG | + | chr3_2:1236873-1236892 | None:intergenic | 45.0% | |
!! | ACAATAGTGCTGGTCATGAG+GGG | + | chr3_2:1237024-1237043 | None:intergenic | 45.0% |
!! | GAACAATAGTGCTGGTCATG+AGG | + | chr3_2:1237026-1237045 | None:intergenic | 45.0% |
!! | AATGGTGGGTGATCCGATAA+TGG | - | chr3_2:1237055-1237074 | Msa0390420:intron | 45.0% |
AATGGAAACCTGATAGCAGG+TGG | - | chr3_2:1237073-1237092 | Msa0390420:intron | 45.0% | |
CTTCTCATGGTCACACTTCA+TGG | - | chr3_2:1237407-1237426 | Msa0390420:intron | 45.0% | |
AGCTGCACACTTAGACTTCT+AGG | + | chr3_2:1237489-1237508 | None:intergenic | 45.0% | |
GCGAAAGGCAAGTTTGAACA+TGG | + | chr3_2:1237790-1237809 | None:intergenic | 45.0% | |
!! | CATTTTGCATTGGTGGGAGA+AGG | + | chr3_2:1237884-1237903 | None:intergenic | 45.0% |
! | CCATGCACATTTTGCATTGG+TGG | + | chr3_2:1237891-1237910 | None:intergenic | 45.0% |
CCACCAATGCAAAATGTGCA+TGG | - | chr3_2:1237888-1237907 | Msa0390420:intron | 45.0% | |
AGGTAGTCACTAGGTATGTG+TGG | + | chr3_2:1237994-1238013 | None:intergenic | 45.0% | |
AGACGTAGACTCCACAATAG+AGG | - | chr3_2:1238139-1238158 | Msa0390420:intron | 45.0% | |
CTTGCCCATTAAACGACACA+AGG | - | chr3_2:1238290-1238309 | Msa0390420:intron | 45.0% | |
!! | GGACCCTTGTGTCGTTTAAT+GGG | + | chr3_2:1238297-1238316 | None:intergenic | 45.0% |
!! | TGGACCCTTGTGTCGTTTAA+TGG | + | chr3_2:1238298-1238317 | None:intergenic | 45.0% |
TGTCAGCAATGCAACACAAG+TGG | - | chr3_2:1238379-1238398 | Msa0390420:intron | 45.0% | |
GTCAGCAATGCAACACAAGT+GGG | - | chr3_2:1238380-1238399 | Msa0390420:intron | 45.0% | |
! | TAGCTAGGGCATCATTCTTG+GGG | + | chr3_2:1238456-1238475 | None:intergenic | 45.0% |
! | CTAGCTAGGGCATCATTCTT+GGG | + | chr3_2:1238457-1238476 | None:intergenic | 45.0% |
!! | GGTCTGGCCTTGAATTTGTT+TGG | + | chr3_2:1238765-1238784 | None:intergenic | 45.0% |
TGCAGCAAAACAGATTCTGC+GGG | - | chr3_2:1239083-1239102 | Msa0390420:intron | 45.0% | |
AGTCCATCTTCCCCATATAC+TGG | - | chr3_2:1239235-1239254 | Msa0390420:intron | 45.0% | |
TAGCCAGTATATGGGGAAGA+TGG | + | chr3_2:1239241-1239260 | None:intergenic | 45.0% | |
CACCCTCTTATCTGCAGATT+TGG | + | chr3_2:1239394-1239413 | None:intergenic | 45.0% | |
! | AGTGTCTTTTCCACTAGCAG+AGG | - | chr3_2:1239543-1239562 | Msa0390420:CDS | 45.0% |
TATGTACTTGCCTCTGCTAG+TGG | + | chr3_2:1239556-1239575 | None:intergenic | 45.0% | |
! | CGGCTTGTTTGATGAAGCAT+TGG | + | chr3_2:1239804-1239823 | None:intergenic | 45.0% |
GTGTAAAGGTGGAAGACTAG+AGG | + | chr3_2:1239918-1239937 | None:intergenic | 45.0% | |
TCGATGAGATGCATGATCGA+GGG | + | chr3_2:1240090-1240109 | None:intergenic | 45.0% | |
! | GAATTGCTACGACGAGTTGA+TGG | + | chr3_2:1240727-1240746 | None:intergenic | 45.0% |
CAACTCGTCGTAGCAATTCA+AGG | - | chr3_2:1240728-1240747 | Msa0390420:intron | 45.0% | |
ATCAAGGGTCTCTGTCTCAA+AGG | + | chr3_2:1240874-1240893 | None:intergenic | 45.0% | |
ACCCTTGATGAGTGTAGTGA+AGG | - | chr3_2:1240885-1240904 | Msa0390420:intron | 45.0% | |
ATTAGTCGTCCACCTTTGGT+GGG | + | chr3_2:1241080-1241099 | None:intergenic | 45.0% | |
GTACGTAGAGACATGCGTAT+TGG | - | chr3_2:1241107-1241126 | Msa0390420:intron | 45.0% | |
AGCCCAAGCAAGGTTTAGTT+AGG | - | chr3_2:1241204-1241223 | Msa0390420:intron | 45.0% | |
CCCTTGTCAAACATCATGGA+AGG | - | chr3_2:1241425-1241444 | Msa0390420:intron | 45.0% | |
! | AGTTCTGGTCTAGAGCAATC+CGG | - | chr3_2:1241487-1241506 | Msa0390420:intron | 45.0% |
! | GCAATCCGGATTTCGTTTTC+CGG | - | chr3_2:1241501-1241520 | Msa0390420:intron | 45.0% |
GTAGTCCGACAATTGGAATC+CGG | - | chr3_2:1241535-1241554 | Msa0390420:intron | 45.0% | |
! | TGAGCAAGAGCATGACGATA+TGG | - | chr3_2:1241781-1241800 | Msa0390420:intron | 45.0% |
TGAGGCAATGGATGAGGATA+TGG | - | chr3_2:1241850-1241869 | Msa0390420:intron | 45.0% | |
GGTAGTCATGAAGTGGTTCA+GGG | + | chr3_2:1241925-1241944 | None:intergenic | 45.0% | |
ATATGGGAAGCAAGGATGTC+TGG | - | chr3_2:1242046-1242065 | Msa0390420:intron | 45.0% | |
TATGGGAAGCAAGGATGTCT+GGG | - | chr3_2:1242047-1242066 | Msa0390420:intron | 45.0% | |
!! | GGTATAAAAAGCATCGCGTG+TGG | + | chr3_2:1242096-1242115 | None:intergenic | 45.0% |
! | GAGTCAACCTTTTCTCTGGA+TGG | - | chr3_2:1242229-1242248 | Msa0390420:intron | 45.0% |
CAGTGACATATATACGGAGC+GGG | - | chr3_2:1242271-1242290 | Msa0390420:intron | 45.0% | |
TGCACCTCCTGAGACTAATT+TGG | - | chr3_2:1242346-1242365 | Msa0390420:intron | 45.0% | |
GCACCTCCTGAGACTAATTT+GGG | - | chr3_2:1242347-1242366 | Msa0390420:intron | 45.0% | |
CACCTCCTGAGACTAATTTG+GGG | - | chr3_2:1242348-1242367 | Msa0390420:intron | 45.0% | |
ACCTCCTGAGACTAATTTGG+GGG | - | chr3_2:1242349-1242368 | Msa0390420:intron | 45.0% | |
CATTGCATTGAGGCAGTAGA+TGG | - | chr3_2:1242443-1242462 | Msa0390420:intron | 45.0% | |
CAGTAGATGGATACATCGAG+TGG | - | chr3_2:1242456-1242475 | Msa0390420:intron | 45.0% | |
! | ATGTGCTTGCTACTCAGGAA+TGG | - | chr3_2:1242561-1242580 | Msa0390420:intron | 45.0% |
TACTCAGGAATGGTGAGCAT+GGG | - | chr3_2:1242571-1242590 | Msa0390420:intron | 45.0% | |
GGTACTTACATCTTAGCGGA+AGG | - | chr3_2:1242592-1242611 | Msa0390420:intron | 45.0% | |
CATACACATGGTCTCTGATG+CGG | + | chr3_2:1242623-1242642 | None:intergenic | 45.0% | |
CCATGTGTATGTGTGATGTC+CGG | - | chr3_2:1242632-1242651 | Msa0390420:intron | 45.0% | |
GTCTGAGGAATGGCAACATT+TGG | - | chr3_2:1242673-1242692 | Msa0390420:intron | 45.0% | |
TGAGGAATGGCAACATTTGG+AGG | - | chr3_2:1242676-1242695 | Msa0390420:intron | 45.0% | |
! | GAAAGAGGTACATGATGGGA+AGG | - | chr3_2:1242706-1242725 | Msa0390420:intron | 45.0% |
TGGTCCGGGTGTAGTTATTA+GGG | - | chr3_2:1242790-1242809 | Msa0390420:intron | 45.0% | |
CTGTTAGAACACATGGTCAC+CGG | - | chr3_2:1242964-1242983 | Msa0390420:intron | 45.0% | |
! | GAGGCATAAGCCATCTGTTT+TGG | + | chr3_2:1243041-1243060 | None:intergenic | 45.0% |
TCCAAACTGCATCAGAACAG+AGG | + | chr3_2:1243060-1243079 | None:intergenic | 45.0% | |
CCGGATTGTGTTAAACTGTC+CGG | + | chr3_2:1243092-1243111 | None:intergenic | 45.0% | |
CCGGACAGTTTAACACAATC+CGG | - | chr3_2:1243089-1243108 | Msa0390420:intron | 45.0% | |
AACTGGCATCATCATCCATC+AGG | - | chr3_2:1243245-1243264 | Msa0390420:intron | 45.0% | |
ACTGGCATCATCATCCATCA+GGG | - | chr3_2:1243246-1243265 | Msa0390420:intron | 45.0% | |
CGGATTATATATTCCGGACC+CGG | - | chr3_2:1243325-1243344 | Msa0390420:intron | 45.0% | |
GGATTATATATTCCGGACCC+GGG | - | chr3_2:1243326-1243345 | Msa0390420:intron | 45.0% | |
GATTATATATTCCGGACCCG+GGG | - | chr3_2:1243327-1243346 | Msa0390420:intron | 45.0% | |
GATCAAGTGGTCGACACATT+AGG | - | chr3_2:1244049-1244068 | Msa0390420:CDS | 45.0% | |
ACCTGTGAATGGGTATAACC+GGG | + | chr3_2:1230850-1230869 | None:intergenic | 45.0% | |
CACCTGTGAATGGGTATAAC+CGG | + | chr3_2:1230851-1230870 | None:intergenic | 45.0% | |
GTTATACCCATTCACAGGTG+TGG | - | chr3_2:1230851-1230870 | Msa0390420:CDS | 45.0% | |
TAAGGTCCACACCTGTGAAT+GGG | + | chr3_2:1230860-1230879 | None:intergenic | 45.0% | |
ATAAGGTCCACACCTGTGAA+TGG | + | chr3_2:1230861-1230880 | None:intergenic | 45.0% | |
ATTCACAGGTGTGGACCTTA+TGG | - | chr3_2:1230860-1230879 | Msa0390420:CDS | 45.0% | |
AGTCTTGCCCTAGCAAGTAT+TGG | - | chr3_2:1230905-1230924 | Msa0390420:CDS | 45.0% | |
AACTTGCCCTCTTGATGTTG+TGG | - | chr3_2:1230931-1230950 | Msa0390420:CDS | 45.0% | |
!! | TGGTGGTGTTGTTGGAAATC+CGG | - | chr3_2:1231135-1231154 | Msa0390420:CDS | 45.0% |
TGTTGTTGGAAATCCGGGAT+GGG | - | chr3_2:1231141-1231160 | Msa0390420:CDS | 45.0% | |
TGAAAGACTGCACCACACTA+GGG | + | chr3_2:1231228-1231247 | None:intergenic | 45.0% | |
TTGAAAGACTGCACCACACT+AGG | + | chr3_2:1231229-1231248 | None:intergenic | 45.0% | |
!!! | TATTTATTTTATTTGTAATA+AGG | + | chr3_2:1231441-1231460 | None:intergenic | 5.0% |
!! | GTAATTTAAAAAATTAATAT+TGG | + | chr3_2:1231485-1231504 | None:intergenic | 5.0% |
!!! | TTATTTTTTTTTAATATTAG+AGG | + | chr3_2:1234763-1234782 | None:intergenic | 5.0% |
TCCCGGTTATACCCATTCAC+AGG | - | chr3_2:1230846-1230865 | Msa0390420:CDS | 50.0% | |
GTCTACACCATTCCATGGTG+TGG | - | chr3_2:1231065-1231084 | Msa0390420:CDS | 50.0% | |
CAAGCTTCCACACCATGGAA+TGG | + | chr3_2:1231075-1231094 | None:intergenic | 50.0% | |
ACGATCAAGCTTCCACACCA+TGG | + | chr3_2:1231080-1231099 | None:intergenic | 50.0% | |
!! | GGTGGTGTTGTTGGAAATCC+GGG | - | chr3_2:1231136-1231155 | Msa0390420:CDS | 50.0% |
! | GTGTTGTTGGAAATCCGGGA+TGG | - | chr3_2:1231140-1231159 | Msa0390420:CDS | 50.0% |
!! | GTTGGTGTTTTGCCCTAGTG+TGG | - | chr3_2:1231213-1231232 | Msa0390420:CDS | 50.0% |
AGAGAAAGAGAGTGGGAGAG+AGG | - | chr3_2:1231749-1231768 | Msa0390420:intron | 50.0% | |
AAAGAGAGTGGGAGAGAGGA+GGG | - | chr3_2:1231753-1231772 | Msa0390420:intron | 50.0% | |
!! | AGACAACGGGTTTTCCCACA+AGG | - | chr3_2:1232453-1232472 | Msa0390420:intron | 50.0% |
!! | GACAACGGGTTTTCCCACAA+GGG | - | chr3_2:1232454-1232473 | Msa0390420:intron | 50.0% |
!! | ACAACGGGTTTTCCCACAAG+GGG | - | chr3_2:1232455-1232474 | Msa0390420:intron | 50.0% |
GCTAGTTGAGATCCCCTTGT+GGG | + | chr3_2:1232470-1232489 | None:intergenic | 50.0% | |
TGCTAGTTGAGATCCCCTTG+TGG | + | chr3_2:1232471-1232490 | None:intergenic | 50.0% | |
TGCATGGAAGAGCTGCTTCT+TGG | + | chr3_2:1232594-1232613 | None:intergenic | 50.0% | |
AGAAGCAGCTCTTCCATGCA+TGG | - | chr3_2:1232594-1232613 | Msa0390420:intron | 50.0% | |
CCCGACATTGCATAAGTCGT+GGG | + | chr3_2:1232820-1232839 | None:intergenic | 50.0% | |
CCCACGACTTATGCAATGTC+GGG | - | chr3_2:1232817-1232836 | Msa0390420:intron | 50.0% | |
!! | GCATGGTTTGGTTCGGTTTG+CGG | - | chr3_2:1234037-1234056 | Msa0390420:intron | 50.0% |
GTTTGCGGCGTGGTTTGATT+CGG | + | chr3_2:1234574-1234593 | None:intergenic | 50.0% | |
TCCCGGTTATACCCATTCAC+AGG | - | chr3_2:1230846-1230865 | Msa0390420:CDS | 50.0% | |
GTCTACACCATTCCATGGTG+TGG | - | chr3_2:1231065-1231084 | Msa0390420:CDS | 50.0% | |
CAAGCTTCCACACCATGGAA+TGG | + | chr3_2:1231075-1231094 | None:intergenic | 50.0% | |
ACGATCAAGCTTCCACACCA+TGG | + | chr3_2:1231080-1231099 | None:intergenic | 50.0% | |
!! | GGTGGTGTTGTTGGAAATCC+GGG | - | chr3_2:1231136-1231155 | Msa0390420:CDS | 50.0% |
! | GTGTTGTTGGAAATCCGGGA+TGG | - | chr3_2:1231140-1231159 | Msa0390420:CDS | 50.0% |
!! | GTTGGTGTTTTGCCCTAGTG+TGG | - | chr3_2:1231213-1231232 | Msa0390420:CDS | 50.0% |
ATGGACACCCAAATGAGGTG+TGG | - | chr3_2:1236321-1236340 | Msa0390420:intron | 50.0% | |
TGGACACCCAAATGAGGTGT+GGG | - | chr3_2:1236322-1236341 | Msa0390420:intron | 50.0% | |
GACTACCCCACACCTCATTT+GGG | + | chr3_2:1236331-1236350 | None:intergenic | 50.0% | |
TGACTACCCCACACCTCATT+TGG | + | chr3_2:1236332-1236351 | None:intergenic | 50.0% | |
ACCAACTCCTCTGTTGCTCT+AGG | - | chr3_2:1236478-1236497 | Msa0390420:intron | 50.0% | |
TCCTAGAGCAACAGAGGAGT+TGG | + | chr3_2:1236482-1236501 | None:intergenic | 50.0% | |
GGCTAGGAAACTGAGCAATG+TGG | - | chr3_2:1236778-1236797 | Msa0390420:intron | 50.0% | |
CAACACACACCCTTACACCT+AGG | - | chr3_2:1236839-1236858 | Msa0390420:intron | 50.0% | |
GGGAATTGGACCTAGGTGTA+AGG | + | chr3_2:1236852-1236871 | None:intergenic | 50.0% | |
GCATTGTGGGAATTGGACCT+AGG | + | chr3_2:1236859-1236878 | None:intergenic | 50.0% | |
!! | CCTCATAAGCCGGTTTTGTG+AGG | + | chr3_2:1236931-1236950 | None:intergenic | 50.0% |
! | CCTCACAAAACCGGCTTATG+AGG | - | chr3_2:1236928-1236947 | Msa0390420:intron | 50.0% |
! | CAAAACCGGCTTATGAGGTG+AGG | - | chr3_2:1236933-1236952 | Msa0390420:intron | 50.0% |
GCATTCCTCACCTCATAAGC+CGG | + | chr3_2:1236941-1236960 | None:intergenic | 50.0% | |
!! | CAATAGTGCTGGTCATGAGG+GGG | + | chr3_2:1237023-1237042 | None:intergenic | 50.0% |
GAAGTCTAAGTGTGCAGCTG+AGG | - | chr3_2:1237490-1237509 | Msa0390420:intron | 50.0% | |
CTTGAAGTTCGGTCTGGACA+TGG | + | chr3_2:1238209-1238228 | None:intergenic | 50.0% | |
TGTCCAGACCGAACTTCAAG+AGG | - | chr3_2:1238209-1238228 | Msa0390420:intron | 50.0% | |
GGGTCCATTGATGCATTCAG+AGG | - | chr3_2:1238311-1238330 | Msa0390420:intron | 50.0% | |
! | GCTAGCTAGGGCATCATTCT+TGG | + | chr3_2:1238458-1238477 | None:intergenic | 50.0% |
GACTACTGCACAGCTAGCTA+GGG | + | chr3_2:1238470-1238489 | None:intergenic | 50.0% | |
AGACTACTGCACAGCTAGCT+AGG | + | chr3_2:1238471-1238490 | None:intergenic | 50.0% | |
GCAGCAAAACAGATTCTGCG+GGG | - | chr3_2:1239084-1239103 | Msa0390420:intron | 50.0% | |
AGCCGTTGTTGCAAAACCCA+TGG | - | chr3_2:1239819-1239838 | Msa0390420:intron | 50.0% | |
GTCGATGAGATGCATGATCG+AGG | + | chr3_2:1240091-1240110 | None:intergenic | 50.0% | |
GGGGAGTGACTGCTAATGTT+CGG | + | chr3_2:1240282-1240301 | None:intergenic | 50.0% | |
TCGTCGTAGCAATTCAAGGG+CGG | - | chr3_2:1240732-1240751 | Msa0390420:intron | 50.0% | |
! | CATGATAAGGTGGTAGCGCT+TGG | + | chr3_2:1240826-1240845 | None:intergenic | 50.0% |
TTGCAATTGAGAGAGTCCCG+AGG | - | chr3_2:1241006-1241025 | Msa0390420:intron | 50.0% | |
TGCAATTGAGAGAGTCCCGA+GGG | - | chr3_2:1241007-1241026 | Msa0390420:intron | 50.0% | |
TCTTGTTAACGAGTGCCCTC+GGG | + | chr3_2:1241025-1241044 | None:intergenic | 50.0% | |
! | GTCTTGTTAACGAGTGCCCT+CGG | + | chr3_2:1241026-1241045 | None:intergenic | 50.0% |
! | GATTAGTCGTCCACCTTTGG+TGG | + | chr3_2:1241081-1241100 | None:intergenic | 50.0% |
CCAAAGGTGGACGACTAATC+CGG | - | chr3_2:1241081-1241100 | Msa0390420:intron | 50.0% | |
ATTCCCAGGGGAACAACACT+TGG | + | chr3_2:1241133-1241152 | None:intergenic | 50.0% | |
AATACCGGGTTCGATTCCCA+GGG | + | chr3_2:1241146-1241165 | None:intergenic | 50.0% | |
!! | AGGAAGGTGTTGTTCCTTCG+AGG | - | chr3_2:1241702-1241721 | Msa0390420:intron | 50.0% |
! | TCTTGCTCATGCTCTGGTTC+CGG | + | chr3_2:1241770-1241789 | None:intergenic | 50.0% |
TCATGCTCTTGCTCATGCTC+TGG | + | chr3_2:1241776-1241795 | None:intergenic | 50.0% | |
GGACGTGCAGCAACAACAAA+TGG | - | chr3_2:1241802-1241821 | Msa0390420:intron | 50.0% | |
CGTGCAGCAACAACAAATGG+AGG | - | chr3_2:1241805-1241824 | Msa0390420:intron | 50.0% | |
GCAGCAACAACAAATGGAGG+AGG | - | chr3_2:1241808-1241827 | Msa0390420:intron | 50.0% | |
GCAACAACAAATGGAGGAGG+AGG | - | chr3_2:1241811-1241830 | Msa0390420:intron | 50.0% | |
AATGGAGGAGGAGGAGTTTC+AGG | - | chr3_2:1241820-1241839 | Msa0390420:intron | 50.0% | |
! | GCAGACGAAGAAGAAGCATG+TGG | - | chr3_2:1241895-1241914 | Msa0390420:intron | 50.0% |
! | GACGAAGAAGAAGCATGTGG+TGG | - | chr3_2:1241898-1241917 | Msa0390420:intron | 50.0% |
GGGTAGTCATGAAGTGGTTC+AGG | + | chr3_2:1241926-1241945 | None:intergenic | 50.0% | |
AGGATGTCTGGGCATCCTAT+CGG | - | chr3_2:1242058-1242077 | Msa0390420:intron | 50.0% | |
CAGGATATGCTGGATCTGAG+TGG | - | chr3_2:1242156-1242175 | Msa0390420:intron | 50.0% | |
GGATCTGAGTGGCGTTGTAA+TGG | - | chr3_2:1242167-1242186 | Msa0390420:intron | 50.0% | |
CTCACGGTGCTCTACATATG+GGG | + | chr3_2:1242193-1242212 | None:intergenic | 50.0% | |
CCTCACGGTGCTCTACATAT+GGG | + | chr3_2:1242194-1242213 | None:intergenic | 50.0% | |
! | GAGCGAGTCAACCTTTTCTC+TGG | - | chr3_2:1242225-1242244 | Msa0390420:intron | 50.0% |
! | AGCGGGTTCTTCGTCAGTTT+GGG | - | chr3_2:1242288-1242307 | Msa0390420:intron | 50.0% |
GGTTCTTCGTCAGTTTGGGA+GGG | - | chr3_2:1242292-1242311 | Msa0390420:intron | 50.0% | |
! | ATCGCCCCCAAATTAGTCTC+AGG | + | chr3_2:1242356-1242375 | None:intergenic | 50.0% |
TCTTCTTGACATGCCGGTAC+CGG | - | chr3_2:1242508-1242527 | Msa0390420:intron | 50.0% | |
ACATCAAGGACCTCACACTC+TGG | + | chr3_2:1242545-1242564 | None:intergenic | 50.0% | |
CCTGAGTAGCAAGCACATCA+AGG | + | chr3_2:1242559-1242578 | None:intergenic | 50.0% | |
! | CCTTGATGTGCTTGCTACTC+AGG | - | chr3_2:1242556-1242575 | Msa0390420:intron | 50.0% |
CTACTCAGGAATGGTGAGCA+TGG | - | chr3_2:1242570-1242589 | Msa0390420:intron | 50.0% | |
CCGGACATCACACATACACA+TGG | + | chr3_2:1242635-1242654 | None:intergenic | 50.0% | |
TGTGTATGTGTGATGTCCGG+TGG | - | chr3_2:1242635-1242654 | Msa0390420:intron | 50.0% | |
TGTCATGAGGGTCTGAGGAA+TGG | - | chr3_2:1242663-1242682 | Msa0390420:intron | 50.0% | |
ATGGGAAGGTTTACCGTCGT+CGG | - | chr3_2:1242720-1242739 | Msa0390420:intron | 50.0% | |
GTGGTCCGGGTGTAGTTATT+AGG | - | chr3_2:1242789-1242808 | Msa0390420:intron | 50.0% | |
AGAGGCTCAGCCAAAACAGA+TGG | - | chr3_2:1243028-1243047 | Msa0390420:intron | 50.0% | |
GCCTCTGTTCTGATGCAGTT+TGG | - | chr3_2:1243056-1243075 | Msa0390420:intron | 50.0% | |
TTCCAAAAATACCCCGGGTC+CGG | + | chr3_2:1243341-1243360 | None:intergenic | 50.0% | |
AGTGCGCGAGGAAAGACATA+GGG | - | chr3_2:1243374-1243393 | Msa0390420:intron | 50.0% | |
TCCCGGTTATACCCATTCAC+AGG | - | chr3_2:1230846-1230865 | Msa0390420:CDS | 50.0% | |
GTCTACACCATTCCATGGTG+TGG | - | chr3_2:1231065-1231084 | Msa0390420:CDS | 50.0% | |
CAAGCTTCCACACCATGGAA+TGG | + | chr3_2:1231075-1231094 | None:intergenic | 50.0% | |
ACGATCAAGCTTCCACACCA+TGG | + | chr3_2:1231080-1231099 | None:intergenic | 50.0% | |
!! | GGTGGTGTTGTTGGAAATCC+GGG | - | chr3_2:1231136-1231155 | Msa0390420:CDS | 50.0% |
! | GTGTTGTTGGAAATCCGGGA+TGG | - | chr3_2:1231140-1231159 | Msa0390420:CDS | 50.0% |
!! | GTTGGTGTTTTGCCCTAGTG+TGG | - | chr3_2:1231213-1231232 | Msa0390420:CDS | 50.0% |
GCTTCAGCTGCTCCAAGAAG+TGG | + | chr3_2:1230761-1230780 | None:intergenic | 55.0% | |
GAAAGAGAGTGGGAGAGAGG+AGG | - | chr3_2:1231752-1231771 | Msa0390420:intron | 55.0% | |
ATGATTCCTGCGGCACCAAG+AGG | + | chr3_2:1232109-1232128 | None:intergenic | 55.0% | |
GCCCGACATTGCATAAGTCG+TGG | + | chr3_2:1232821-1232840 | None:intergenic | 55.0% | |
!! | CGTGGTTTGATTCGGCTTGG+AGG | + | chr3_2:1234566-1234585 | None:intergenic | 55.0% |
GCTTCAGCTGCTCCAAGAAG+TGG | + | chr3_2:1230761-1230780 | None:intergenic | 55.0% | |
GGACACCCAAATGAGGTGTG+GGG | - | chr3_2:1236323-1236342 | Msa0390420:intron | 55.0% | |
ACTGAGCCACAGAGGTGACA+CGG | - | chr3_2:1236601-1236620 | Msa0390420:intron | 55.0% | |
GGTGACACGGGTTCCTACAA+AGG | - | chr3_2:1236614-1236633 | Msa0390420:intron | 55.0% | |
TCATTGGGCCACCTGCTATC+AGG | + | chr3_2:1237084-1237103 | None:intergenic | 55.0% | |
CTGCCTCTTGAAGTTCGGTC+TGG | + | chr3_2:1238215-1238234 | None:intergenic | 55.0% | |
CAGACCGAACTTCAAGAGGC+AGG | - | chr3_2:1238213-1238232 | Msa0390420:intron | 55.0% | |
GGCGTGCTGAGCCTATCTTA+TGG | + | chr3_2:1238968-1238987 | None:intergenic | 55.0% | |
! | ACCTTTGGTGGGTCGGAATC+CGG | + | chr3_2:1241069-1241088 | None:intergenic | 55.0% |
!! | CCGGATTAGTCGTCCACCTT+TGG | + | chr3_2:1241084-1241103 | None:intergenic | 55.0% |
GCATGTCTCTACGTACGAGC+CGG | + | chr3_2:1241103-1241122 | None:intergenic | 55.0% | |
! | TTGGCCAAGTGTTGTTCCCC+TGG | - | chr3_2:1241126-1241145 | Msa0390420:intron | 55.0% |
! | TGGCCAAGTGTTGTTCCCCT+GGG | - | chr3_2:1241127-1241146 | Msa0390420:intron | 55.0% |
ATACCGGGTTCGATTCCCAG+GGG | + | chr3_2:1241145-1241164 | None:intergenic | 55.0% | |
GAATACCGGGTTCGATTCCC+AGG | + | chr3_2:1241147-1241166 | None:intergenic | 55.0% | |
GAATCGAACCCGGTATTCCC+CGG | - | chr3_2:1241149-1241168 | Msa0390420:intron | 55.0% | |
AATCGAACCCGGTATTCCCC+GGG | - | chr3_2:1241150-1241169 | Msa0390420:intron | 55.0% | |
TGGCAAGGAGCTCCTTCCAA+GGG | + | chr3_2:1241180-1241199 | None:intergenic | 55.0% | |
TTGGAAGGAGCTCCTTGCCA+CGG | - | chr3_2:1241180-1241199 | Msa0390420:intron | 55.0% | |
CTTCACCAACACCACCACAC+CGG | - | chr3_2:1241275-1241294 | Msa0390420:intron | 55.0% | |
TTCACCAACACCACCACACC+GGG | - | chr3_2:1241276-1241295 | Msa0390420:intron | 55.0% | |
GTCCTTCACTCGACGCGTAA+GGG | - | chr3_2:1241631-1241650 | Msa0390420:intron | 55.0% | |
ATCCCTTACGCGTCGAGTGA+AGG | + | chr3_2:1241636-1241655 | None:intergenic | 55.0% | |
ATGCAGGACATGCTTCCCGT+AGG | - | chr3_2:1241654-1241673 | Msa0390420:intron | 55.0% | |
AGGACATGCTTCCCGTAGGA+GGG | - | chr3_2:1241658-1241677 | Msa0390420:intron | 55.0% | |
ACCTTCCTCCTCCATCCGTT+GGG | + | chr3_2:1241690-1241709 | None:intergenic | 55.0% | |
! | GTGTTGTTCCTTCGAGGCGT+CGG | - | chr3_2:1241708-1241727 | Msa0390420:intron | 55.0% |
! | TGTTGTTCCTTCGAGGCGTC+GGG | - | chr3_2:1241709-1241728 | Msa0390420:intron | 55.0% |
TGCTAATGTCGAGCCTCAGC+CGG | - | chr3_2:1241748-1241767 | Msa0390420:intron | 55.0% | |
GGAGTTTCAGGAGGAGCTTG+AGG | - | chr3_2:1241832-1241851 | Msa0390420:intron | 55.0% | |
TCAGGAGGAGCTTGAGGCAA+TGG | - | chr3_2:1241838-1241857 | Msa0390420:intron | 55.0% | |
GGAGCTTGAGGCAATGGATG+AGG | - | chr3_2:1241844-1241863 | Msa0390420:intron | 55.0% | |
TTCTTCGTCTGCCTTCGCTG+TGG | + | chr3_2:1241887-1241906 | None:intergenic | 55.0% | |
CCACTCGGGTAGTCATGAAG+TGG | + | chr3_2:1241932-1241951 | None:intergenic | 55.0% | |
CCACTTCATGACTACCCGAG+TGG | - | chr3_2:1241929-1241948 | Msa0390420:intron | 55.0% | |
ACAGCAGGCTAGTGTCGTGT+GGG | + | chr3_2:1241955-1241974 | None:intergenic | 55.0% | |
!! | TTGCCAAGGAAGGCGTCTGA+TGG | - | chr3_2:1241992-1242011 | Msa0390420:intron | 55.0% |
GGATGTCTGGGCATCCTATC+GGG | - | chr3_2:1242059-1242078 | Msa0390420:intron | 55.0% | |
!! | CCCATATGTAGAGCACCGTG+AGG | - | chr3_2:1242191-1242210 | Msa0390420:intron | 55.0% |
GCCTCACGGTGCTCTACATA+TGG | + | chr3_2:1242195-1242214 | None:intergenic | 55.0% | |
GCTCAAACAGACGTGCCTCA+CGG | + | chr3_2:1242209-1242228 | None:intergenic | 55.0% | |
! | GAGCGGGTTCTTCGTCAGTT+TGG | - | chr3_2:1242287-1242306 | Msa0390420:intron | 55.0% |
GGGTTCTTCGTCAGTTTGGG+AGG | - | chr3_2:1242291-1242310 | Msa0390420:intron | 55.0% | |
CTCAACGGGATGTCTCGGTA+TGG | + | chr3_2:1242324-1242343 | None:intergenic | 55.0% | |
CATACCGAGACATCCCGTTG+AGG | - | chr3_2:1242322-1242341 | Msa0390420:intron | 55.0% | |
GCAACCTCAACGGGATGTCT+CGG | + | chr3_2:1242329-1242348 | None:intergenic | 55.0% | |
! | TCAGGAGGTGCAACCTCAAC+GGG | + | chr3_2:1242338-1242357 | None:intergenic | 55.0% |
! | CTCAGGAGGTGCAACCTCAA+CGG | + | chr3_2:1242339-1242358 | None:intergenic | 55.0% |
! | GCCCCCAAATTAGTCTCAGG+AGG | + | chr3_2:1242353-1242372 | None:intergenic | 55.0% |
TCATGCGTGGATGAGACACC+TGG | + | chr3_2:1242487-1242506 | None:intergenic | 55.0% | |
TCAAGGACCTCACACTCTGG+TGG | + | chr3_2:1242542-1242561 | None:intergenic | 55.0% | |
ATGTGTGATGTCCGGTGGTC+TGG | - | chr3_2:1242640-1242659 | Msa0390420:intron | 55.0% | |
!! | TCTGGTGTCATGAGGGTCTG+AGG | - | chr3_2:1242658-1242677 | Msa0390420:intron | 55.0% |
TGGGAAGGTTTACCGTCGTC+GGG | - | chr3_2:1242721-1242740 | Msa0390420:intron | 55.0% | |
AGAACACATGGTCACCGGCA+TGG | - | chr3_2:1242969-1242988 | Msa0390420:intron | 55.0% | |
GGCATCATCATCCATCAGGG+TGG | - | chr3_2:1243249-1243268 | Msa0390420:intron | 55.0% | |
TGGCACTTCAACCACCCTGA+TGG | + | chr3_2:1243263-1243282 | None:intergenic | 55.0% | |
!! | TTCCGGACCCGGGGTATTTT+TGG | - | chr3_2:1243336-1243355 | Msa0390420:intron | 55.0% |
GAGTGCGCGAGGAAAGACAT+AGG | - | chr3_2:1243373-1243392 | Msa0390420:intron | 55.0% | |
GCTTCAGCTGCTCCAAGAAG+TGG | + | chr3_2:1230761-1230780 | None:intergenic | 55.0% | |
!! | TCTCATCCTCTTGGTGCCGC+AGG | - | chr3_2:1232100-1232119 | Msa0390420:intron | 60.0% |
!! | CGGCGTGGTTTGATTCGGCT+TGG | + | chr3_2:1234569-1234588 | None:intergenic | 60.0% |
!!! | CTTTTGGGGTGTTTGCGGCG+TGG | + | chr3_2:1234584-1234603 | None:intergenic | 60.0% |
CTGAGCCACAGAGGTGACAC+GGG | - | chr3_2:1236602-1236621 | Msa0390420:intron | 60.0% | |
AGGAACCCGTGTCACCTCTG+TGG | + | chr3_2:1236610-1236629 | None:intergenic | 60.0% | |
ACCGGATTCCGACCCACCAA+AGG | - | chr3_2:1241065-1241084 | Msa0390420:intron | 60.0% | |
GGATTCCGACCCACCAAAGG+TGG | - | chr3_2:1241068-1241087 | Msa0390420:intron | 60.0% | |
! | GTCGTCCACCTTTGGTGGGT+CGG | + | chr3_2:1241076-1241095 | None:intergenic | 60.0% |
GTTCCCCTGGGAATCGAACC+CGG | - | chr3_2:1241139-1241158 | Msa0390420:intron | 60.0% | |
GTGGCAAGGAGCTCCTTCCA+AGG | + | chr3_2:1241181-1241200 | None:intergenic | 60.0% | |
TGGAAGGAGCTCCTTGCCAC+GGG | - | chr3_2:1241181-1241200 | Msa0390420:intron | 60.0% | |
AAACCTTGCTTGGGCTCCCG+TGG | + | chr3_2:1241200-1241219 | None:intergenic | 60.0% | |
GTAAAAATGGGGTGGGGGCC+CGG | + | chr3_2:1241297-1241316 | None:intergenic | 60.0% | |
CGTCCTTCACTCGACGCGTA+AGG | - | chr3_2:1241630-1241649 | Msa0390420:intron | 60.0% | |
ACTCGACGCGTAAGGGATGC+AGG | - | chr3_2:1241638-1241657 | Msa0390420:intron | 60.0% | |
CAGGACATGCTTCCCGTAGG+AGG | - | chr3_2:1241657-1241676 | Msa0390420:intron | 60.0% | |
TTGGGTACGCTCCCTCCTAC+GGG | + | chr3_2:1241672-1241691 | None:intergenic | 60.0% | |
GTTGGGTACGCTCCCTCCTA+CGG | + | chr3_2:1241673-1241692 | None:intergenic | 60.0% | |
! | GTAGGAGGGAGCGTACCCAA+CGG | - | chr3_2:1241672-1241691 | Msa0390420:intron | 60.0% |
ACCCAACGGATGGAGGAGGA+AGG | - | chr3_2:1241686-1241705 | Msa0390420:intron | 60.0% | |
CACCTTCCTCCTCCATCCGT+TGG | + | chr3_2:1241691-1241710 | None:intergenic | 60.0% | |
!! | GTTGTTCCTTCGAGGCGTCG+GGG | - | chr3_2:1241710-1241729 | Msa0390420:intron | 60.0% |
! | TCATGCTCTGGTTCCGGCTG+AGG | + | chr3_2:1241764-1241783 | None:intergenic | 60.0% |
GGAGGAGGAGGAGTTTCAGG+AGG | - | chr3_2:1241823-1241842 | Msa0390420:intron | 60.0% | |
AAGACGAGCAGCCACAGCGA+AGG | - | chr3_2:1241873-1241892 | Msa0390420:intron | 60.0% | |
TAGTGTCGTGTGGGCCACTC+GGG | + | chr3_2:1241946-1241965 | None:intergenic | 60.0% | |
CTAGTGTCGTGTGGGCCACT+CGG | + | chr3_2:1241947-1241966 | None:intergenic | 60.0% | |
CACAGCAGGCTAGTGTCGTG+TGG | + | chr3_2:1241956-1241975 | None:intergenic | 60.0% | |
! | CACACGACACTAGCCTGCTG+TGG | - | chr3_2:1241954-1241973 | Msa0390420:intron | 60.0% |
! | ACGACACTAGCCTGCTGTGG+AGG | - | chr3_2:1241957-1241976 | Msa0390420:intron | 60.0% |
GGTACCATGCGCACTTGCCA+AGG | - | chr3_2:1241978-1241997 | Msa0390420:intron | 60.0% | |
CCTTCCTTGGCAAGTGCGCA+TGG | + | chr3_2:1241985-1242004 | None:intergenic | 60.0% | |
CCATGCGCACTTGCCAAGGA+AGG | - | chr3_2:1241982-1242001 | Msa0390420:intron | 60.0% | |
TCGCCATCAGACGCCTTCCT+TGG | + | chr3_2:1241998-1242017 | None:intergenic | 60.0% | |
!! | AAGGAAGGCGTCTGATGGCG+AGG | - | chr3_2:1241997-1242016 | Msa0390420:intron | 60.0% |
TGTCTGGGCATCCTATCGGG+AGG | - | chr3_2:1242062-1242081 | Msa0390420:intron | 60.0% | |
GGGCATCCTATCGGGAGGAT+CGG | - | chr3_2:1242067-1242086 | Msa0390420:intron | 60.0% | |
GGCATCCTATCGGGAGGATC+GGG | - | chr3_2:1242068-1242087 | Msa0390420:intron | 60.0% | |
TGGATCCCGATCCTCCCGAT+AGG | + | chr3_2:1242076-1242095 | None:intergenic | 60.0% | |
GGTGTGCCCAAACCAGACAG+TGG | + | chr3_2:1242117-1242136 | None:intergenic | 60.0% | |
! | TGCGCTGACACCTGAGCAGT+TGG | - | chr3_2:1242406-1242425 | Msa0390420:intron | 60.0% |
! | GCGCTGACACCTGAGCAGTT+GGG | - | chr3_2:1242407-1242426 | Msa0390420:intron | 60.0% |
CGCTGACACCTGAGCAGTTG+GGG | - | chr3_2:1242408-1242427 | Msa0390420:intron | 60.0% | |
!! | TCCGGTGGTCTGGTGTCATG+AGG | - | chr3_2:1242650-1242669 | Msa0390420:intron | 60.0% |
CCCTCATGACACCAGACCAC+CGG | + | chr3_2:1242654-1242673 | None:intergenic | 60.0% | |
!! | CCGGTGGTCTGGTGTCATGA+GGG | - | chr3_2:1242651-1242670 | Msa0390420:intron | 60.0% |
GGGAAGGTTTACCGTCGTCG+GGG | - | chr3_2:1242722-1242741 | Msa0390420:intron | 60.0% | |
CCTTAGTAGCTCCCCGACGA+CGG | + | chr3_2:1242736-1242755 | None:intergenic | 60.0% | |
CGTCGTCGGGGAGCTACTAA+GGG | - | chr3_2:1242734-1242753 | Msa0390420:intron | 60.0% | |
GGAGCTACTAAGGGTGGCAG+AGG | - | chr3_2:1242743-1242762 | Msa0390420:intron | 60.0% | |
GCTACTAAGGGTGGCAGAGG+TGG | - | chr3_2:1242746-1242765 | Msa0390420:intron | 60.0% | |
ACTAAGGGTGGCAGAGGTGG+TGG | - | chr3_2:1242749-1242768 | Msa0390420:intron | 60.0% | |
AGGGCGTACCCGGGGAATAC+CGG | + | chr3_2:1241161-1241180 | None:intergenic | 65.0% | |
GTATTCCCCGGGTACGCCCT+TGG | - | chr3_2:1241161-1241180 | Msa0390420:intron | 65.0% | |
! | TCCTTCCAAGGGCGTACCCG+GGG | + | chr3_2:1241169-1241188 | None:intergenic | 65.0% |
! | CTCCTTCCAAGGGCGTACCC+GGG | + | chr3_2:1241170-1241189 | None:intergenic | 65.0% |
! | GCTCCTTCCAAGGGCGTACC+CGG | + | chr3_2:1241171-1241190 | None:intergenic | 65.0% |
TTGCTTGGGCTCCCGTGGCA+AGG | + | chr3_2:1241195-1241214 | None:intergenic | 65.0% | |
TTGCCACGGGAGCCCAAGCA+AGG | - | chr3_2:1241194-1241213 | Msa0390420:intron | 65.0% | |
! | GAGGGAGCGTACCCAACGGA+TGG | - | chr3_2:1241676-1241695 | Msa0390420:intron | 65.0% |
GGAGCGTACCCAACGGATGG+AGG | - | chr3_2:1241679-1241698 | Msa0390420:intron | 65.0% | |
GCGTACCCAACGGATGGAGG+AGG | - | chr3_2:1241682-1241701 | Msa0390420:intron | 65.0% | |
TTGTCACCCCGACGCCTCGA+AGG | + | chr3_2:1241719-1241738 | None:intergenic | 65.0% | |
!! | TCGAGGCGTCGGGGTGACAA+AGG | - | chr3_2:1241719-1241738 | Msa0390420:intron | 65.0% |
GCGCATGGTACCTCCACAGC+AGG | + | chr3_2:1241970-1241989 | None:intergenic | 65.0% | |
GCACGTTGCCCCAACTGCTC+AGG | + | chr3_2:1242419-1242438 | None:intergenic | 65.0% | |
!! | ACATGCCGGTACCGGTGTCG+AGG | - | chr3_2:1242516-1242535 | Msa0390420:intron | 65.0% |
CACTCTGGTGGCCTCGACAC+CGG | + | chr3_2:1242530-1242549 | None:intergenic | 65.0% | |
GTCGAGGCCACCAGAGTGTG+AGG | - | chr3_2:1242532-1242551 | Msa0390420:intron | 65.0% | |
CCGTCGTCGGGGAGCTACTA+AGG | - | chr3_2:1242733-1242752 | Msa0390420:intron | 65.0% | |
CGTCGGGGAGCTACTAAGGG+TGG | - | chr3_2:1242737-1242756 | Msa0390420:intron | 65.0% | |
GGGCGTACCCGGGGAATACC+GGG | + | chr3_2:1241160-1241179 | None:intergenic | 70.0% | |
TCCCCGGGTACGCCCTTGGA+AGG | - | chr3_2:1241165-1241184 | Msa0390420:intron | 70.0% | |
GGTGGCCTCGACACCGGTAC+CGG | + | chr3_2:1242524-1242543 | None:intergenic | 70.0% | |
! | AGGGTGGCAGAGGTGGTGGC+AGG | - | chr3_2:1242753-1242772 | Msa0390420:intron | 70.0% |
! | GGGTGGCAGAGGTGGTGGCA+GGG | - | chr3_2:1242754-1242773 | Msa0390420:intron | 70.0% |
! | GGTGGCAGAGGTGGTGGCAG+GGG | - | chr3_2:1242755-1242774 | Msa0390420:intron | 70.0% |
! | AGAGGTGGTGGCAGGGGTGG+TGG | - | chr3_2:1242761-1242780 | Msa0390420:intron | 70.0% |
! | GGGGCCCGGTGTGGTGGTGT+TGG | + | chr3_2:1241283-1241302 | None:intergenic | 75.0% |
AATGGGGTGGGGGCCCGGTG+TGG | + | chr3_2:1241292-1241311 | None:intergenic | 75.0% | |
! | GGCAGAGGTGGTGGCAGGGG+TGG | - | chr3_2:1242758-1242777 | Msa0390420:intron | 75.0% |
! | GGTGGTGGCAGGGGTGGTGG+CGG | - | chr3_2:1242764-1242783 | Msa0390420:intron | 75.0% |
!! | GGGTGGTGGCGGTGGTGGTC+CGG | - | chr3_2:1242775-1242794 | Msa0390420:intron | 75.0% |
!! | GGTGGTGGCGGTGGTGGTCC+GGG | - | chr3_2:1242776-1242795 | Msa0390420:intron | 75.0% |
!!! | GGTGGCAGGGGTGGTGGCGG+TGG | - | chr3_2:1242767-1242786 | Msa0390420:intron | 80.0% |
!!! | GGCAGGGGTGGTGGCGGTGG+TGG | - | chr3_2:1242770-1242789 | Msa0390420:intron | 80.0% |
! | GGGGTGGGGGCCCGGTGTGG+TGG | + | chr3_2:1241289-1241308 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 1230704 | 1244609 | 1230704 | ID=Msa0390420;Name=Msa0390420 |
chr3_2 | mRNA | 1230704 | 1244609 | 1230704 | ID=Msa0390420-mRNA-1;Parent=Msa0390420;Name=Msa0390420-mRNA-1;_AED=0.15;_eAED=0.19;_QI=0|0|0|1|0|0|8|0|550 |
chr3_2 | exon | 1244520 | 1244609 | 1244520 | ID=Msa0390420-mRNA-1:exon:394;Parent=Msa0390420-mRNA-1 |
chr3_2 | exon | 1244463 | 1244503 | 1244463 | ID=Msa0390420-mRNA-1:exon:393;Parent=Msa0390420-mRNA-1 |
chr3_2 | exon | 1244208 | 1244445 | 1244208 | ID=Msa0390420-mRNA-1:exon:392;Parent=Msa0390420-mRNA-1 |
chr3_2 | exon | 1243986 | 1244198 | 1243986 | ID=Msa0390420-mRNA-1:exon:391;Parent=Msa0390420-mRNA-1 |
chr3_2 | exon | 1239789 | 1239829 | 1239789 | ID=Msa0390420-mRNA-1:exon:390;Parent=Msa0390420-mRNA-1 |
chr3_2 | exon | 1239534 | 1239771 | 1239534 | ID=Msa0390420-mRNA-1:exon:389;Parent=Msa0390420-mRNA-1 |
chr3_2 | exon | 1239341 | 1239524 | 1239341 | ID=Msa0390420-mRNA-1:exon:388;Parent=Msa0390420-mRNA-1 |
chr3_2 | exon | 1230704 | 1231311 | 1230704 | ID=Msa0390420-mRNA-1:exon:387;Parent=Msa0390420-mRNA-1 |
chr3_2 | CDS | 1244520 | 1244609 | 1244520 | ID=Msa0390420-mRNA-1:cds;Parent=Msa0390420-mRNA-1 |
chr3_2 | CDS | 1244463 | 1244503 | 1244463 | ID=Msa0390420-mRNA-1:cds;Parent=Msa0390420-mRNA-1 |
chr3_2 | CDS | 1244208 | 1244445 | 1244208 | ID=Msa0390420-mRNA-1:cds;Parent=Msa0390420-mRNA-1 |
chr3_2 | CDS | 1243986 | 1244198 | 1243986 | ID=Msa0390420-mRNA-1:cds;Parent=Msa0390420-mRNA-1 |
chr3_2 | CDS | 1239789 | 1239829 | 1239789 | ID=Msa0390420-mRNA-1:cds;Parent=Msa0390420-mRNA-1 |
chr3_2 | CDS | 1239534 | 1239771 | 1239534 | ID=Msa0390420-mRNA-1:cds;Parent=Msa0390420-mRNA-1 |
chr3_2 | CDS | 1239341 | 1239524 | 1239341 | ID=Msa0390420-mRNA-1:cds;Parent=Msa0390420-mRNA-1 |
chr3_2 | CDS | 1230704 | 1231311 | 1230704 | ID=Msa0390420-mRNA-1:cds;Parent=Msa0390420-mRNA-1 |
Gene Sequence |
Protein sequence |