AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0390780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0390780 MtrunA17_Chr2g0330141 84.469 367 25 2 1 335 1 367 1.86e-172 483
Msa0390780 MtrunA17_Chr2g0299501 58.678 363 113 5 6 335 11 369 9.49e-110 324
Msa0390780 MtrunA17_Chr2g0299511 53.360 253 82 3 44 265 5 252 6.73e-91 274
Msa0390780 MtrunA17_Chr2g0299521 49.573 234 106 4 20 248 18 244 9.55e-58 187
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0390780 AT2G19480.3 58.583 367 115 4 5 335 7 372 3.30e-115 338
Msa0390780 AT2G19480.2 62.585 294 76 3 5 265 7 299 4.07e-113 333
Msa0390780 AT2G19480.1 62.585 294 76 3 5 265 7 299 4.94e-113 333
Msa0390780 AT5G56950.1 56.911 369 120 5 5 335 7 374 1.18e-112 332
Msa0390780 AT4G26110.2 59.933 297 84 3 5 267 7 302 1.46e-111 328
Msa0390780 AT4G26110.1 59.933 297 84 3 5 267 7 302 1.76e-111 329
Msa0390780 AT3G13782.2 47.368 304 102 6 2 265 13 298 1.64e-76 238
Msa0390780 AT3G13782.1 47.368 304 102 6 2 265 13 298 1.64e-76 238
Msa0390780 AT1G74560.3 33.333 192 100 7 54 239 51 220 1.87e-17 81.3
Msa0390780 AT1G74560.1 31.799 239 120 9 54 290 51 248 1.66e-11 63.9

Find 107 sgRNAs with CRISPR-Local

Find 498 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTCTCTGCTTGGGATTCT+TGG 0.143021 3_2:+1870837 Msa0390780:three_prime_UTR
TTCCCCAAAGATAAACAATT+TGG 0.145133 3_2:+1871086 Msa0390780:three_prime_UTR
ATGGAGCATGATTATGATAT+TGG 0.178236 3_2:+1869583 Msa0390780:CDS
TATCCCAAATTGTTTATCTT+TGG 0.219804 3_2:-1871090 None:intergenic
ATCCCAAATTGTTTATCTTT+GGG 0.237343 3_2:-1871089 None:intergenic
CCTATTGATTTCTCTAATAT+AGG 0.244249 3_2:-1869194 None:intergenic
CGTCATCATCCTCGGGAATC+TGG 0.256403 3_2:-1869438 None:intergenic
TGAAGAGCTTCAAAATTTAA+TGG 0.286494 3_2:+1869564 Msa0390780:CDS
AATGAAGACTAATGAAATAT+TGG 0.305931 3_2:+1868918 Msa0390780:CDS
AGAAAGGAGTCCCTAGCTTT+TGG 0.317796 3_2:+1868887 Msa0390780:CDS
TGACTGATCTTTACCAGGTT+TGG 0.330775 3_2:-1870601 None:intergenic
CTATTGATTTCTCTAATATA+GGG 0.335034 3_2:-1869193 None:intergenic
CCTATATTAGAGAAATCAAT+AGG 0.345836 3_2:+1869194 Msa0390780:CDS
GTAGGATAAGCTTCAGCTCT+TGG 0.371162 3_2:+1867672 Msa0390780:intron
ATGAAAGAAATGAAGAAAAC+TGG 0.380385 3_2:-1867212 None:intergenic
GTTCTCTGCTTGGGATTCTT+GGG 0.380738 3_2:+1870838 Msa0390780:three_prime_UTR
TCCCCAAAGATAAACAATTT+GGG 0.382037 3_2:+1871087 Msa0390780:three_prime_UTR
ATCAATTTCGTCATCATCCT+CGG 0.387289 3_2:-1869446 None:intergenic
GTATAATTACTGTTAGAGTC+TGG 0.389827 3_2:+1870734 Msa0390780:three_prime_UTR
TTAGTTGTGTGCAACATTCC+TGG 0.395630 3_2:+1870691 Msa0390780:three_prime_UTR
GATAAGCTTCAGCTCTTGGC+TGG 0.400903 3_2:+1867676 Msa0390780:CDS
TGGAGCATGATTATGATATT+GGG 0.401577 3_2:+1869584 Msa0390780:CDS
GTCATCATCCTCGGGAATCT+GGG 0.405862 3_2:-1869437 None:intergenic
AGAAATAAAATCAATATCAA+TGG 0.406750 3_2:-1870875 None:intergenic
TCATGCTGTGTCATGGTTCA+CGG 0.413395 3_2:+1870255 Msa0390780:CDS
AGGAGGAAGACGAAGGGAAG+GGG 0.415086 3_2:+1870395 Msa0390780:CDS
TTAGTTGTGTGCAACATTCC+TGG 0.420747 3_2:+1870660 Msa0390780:three_prime_UTR
GATCTTCCCGCTGCCGCCGC+CGG 0.433634 3_2:+1867254 Msa0390780:CDS
TCAACACGTTGCCTGACATT+AGG 0.442995 3_2:-1867730 None:intergenic
TACTGCTGCTTGCAATCAGC+AGG 0.443739 3_2:-1870633 None:intergenic
AACTCCAGCTTGAAACCCTT+GGG 0.448772 3_2:-1869098 None:intergenic
GAGGAGGAAGACGAAGGGAA+GGG 0.455702 3_2:+1870394 Msa0390780:CDS
ATGAAGACTAATGAAATATT+GGG 0.458634 3_2:+1868919 Msa0390780:CDS
ATGTTACCGGCGGCGGCAGC+GGG 0.460017 3_2:-1867260 None:intergenic
TTTGTGTCAAGCACTTTCCT+GGG 0.461063 3_2:-1869318 None:intergenic
TGAGGAGGAAGACGAAGGGA+AGG 0.464687 3_2:+1870393 Msa0390780:CDS
AATTACAAACGAAGCAGGAC+AGG 0.467567 3_2:+1868752 Msa0390780:CDS
CTGGCAAAGGAGGAGGGAAA+TGG 0.469776 3_2:-1867193 None:intergenic
ATTGCAGTTAACCAAAAGCT+AGG 0.474607 3_2:-1868898 None:intergenic
GATGTTACCGGCGGCGGCAG+CGG 0.475914 3_2:-1867261 None:intergenic
AAACTCCAGCTTGAAACCCT+TGG 0.483887 3_2:-1869099 None:intergenic
TATAATTACTGTTAGAGTCT+GGG 0.484035 3_2:+1870735 Msa0390780:three_prime_UTR
TCCCAAATTGTTTATCTTTG+GGG 0.493268 3_2:-1871088 None:intergenic
GAAATAAAATCAATATCAAT+GGG 0.496039 3_2:-1870874 None:intergenic
GGCGGCGGCAGCGGGAAGAT+CGG 0.499586 3_2:-1867252 None:intergenic
AAGAAAACTGGCAAAGGAGG+AGG 0.501162 3_2:-1867200 None:intergenic
AGAACGAAAATATTAACAAA+AGG 0.507393 3_2:-1870820 None:intergenic
ATCACAGTAATATCATGTCT+CGG 0.508222 3_2:-1871134 None:intergenic
CATGCTGTGTCATGGTTCAC+GGG 0.510537 3_2:+1870256 Msa0390780:CDS
AGACAGAGATGAAGATGAAG+AGG 0.511035 3_2:+1870330 Msa0390780:CDS
CAATCCCAAGGGTTTCAAGC+TGG 0.511184 3_2:+1869094 Msa0390780:CDS
CGGCTGATGAATCATGCAAT+TGG 0.511955 3_2:+1871046 Msa0390780:three_prime_UTR
ATAAGCTTCAGCTCTTGGCT+GGG 0.519230 3_2:+1867677 Msa0390780:CDS
TCACAGTAATATCATGTCTC+GGG 0.519951 3_2:-1871133 None:intergenic
AAACACTTTCGCCTAATGTC+AGG 0.521826 3_2:+1867719 Msa0390780:CDS
AGGAAAGTGCTTGACACAAA+AGG 0.521935 3_2:+1869321 Msa0390780:CDS
TGAGGATGAAGATGATGAGG+AGG 0.524386 3_2:+1870378 Msa0390780:CDS
ATGATGAGGAGGAAGACGAA+GGG 0.532918 3_2:+1870389 Msa0390780:CDS
GATGATGAGGAGGAAGACGA+AGG 0.535181 3_2:+1870388 Msa0390780:CDS
GGGAAGATCGGCGGATTGAT+CGG 0.536009 3_2:-1867240 None:intergenic
TCAATTTCGTCATCATCCTC+GGG 0.537035 3_2:-1869445 None:intergenic
TCATCCTCGGGAATCTGGGG+AGG 0.537400 3_2:-1869433 None:intergenic
ATATTAACAAAAGGAAAGAC+AGG 0.538854 3_2:-1870811 None:intergenic
TGATGACGATGAAGAGGATG+AGG 0.541376 3_2:+1870360 Msa0390780:CDS
TAATGTCAGGCAACGTGTTG+AGG 0.542732 3_2:+1867732 Msa0390780:CDS
TAATGAAATATTGGGTGAAG+AGG 0.544626 3_2:+1868927 Msa0390780:CDS
GGATGAGGATGAAGATGATG+AGG 0.546840 3_2:+1870375 Msa0390780:CDS
TCAGTTGACTGATCTTTACC+AGG 0.547286 3_2:-1870606 None:intergenic
AGTGGTAGCAAGGCCAAACC+TGG 0.552380 3_2:+1870588 Msa0390780:CDS
TAAGCTTCAGCTCTTGGCTG+GGG 0.556329 3_2:+1867678 Msa0390780:CDS
TTATTCCTCATGCTGTGTCA+TGG 0.556398 3_2:+1870248 Msa0390780:CDS
TGTGTCATGGTTCACGGGAG+AGG 0.556613 3_2:+1870261 Msa0390780:CDS
AGTATCTCAAAGATATCAAG+TGG 0.556691 3_2:+1869060 Msa0390780:CDS
GGCGGCAGCGGGAAGATCGG+CGG 0.558135 3_2:-1867249 None:intergenic
TAGAGGTACGAGATTGTCAA+TGG 0.558349 3_2:+1868711 Msa0390780:intron
CACAAAAGGTTATGAAGAAG+AGG 0.558627 3_2:+1869335 Msa0390780:CDS
ACACAACTAAACATATATCC+AGG 0.563277 3_2:-1870678 None:intergenic
CTATATTAGAGAAATCAATA+GGG 0.565007 3_2:+1869195 Msa0390780:CDS
ATGAAGAAGAGGCCAAAGAA+AGG 0.565048 3_2:+1869346 Msa0390780:CDS
AATGGTGTTATTGACGTTGA+AGG 0.565526 3_2:+1868729 Msa0390780:CDS
GAAATTGATGTTACCGGCGG+CGG 0.568217 3_2:-1867267 None:intergenic
ATGAAGAAAACTGGCAAAGG+AGG 0.569417 3_2:-1867203 None:intergenic
TGGGGATCGTGTGGATGTCA+TGG 0.574954 3_2:+1867696 Msa0390780:CDS
GAAATGAAGAAAACTGGCAA+AGG 0.576848 3_2:-1867206 None:intergenic
CATCCTCGGGAATCTGGGGA+GGG 0.576916 3_2:-1869432 None:intergenic
AGTGTATCAAATTCTGCGAT+CGG 0.577008 3_2:+1871026 Msa0390780:three_prime_UTR
CTCAGTGCTGAAGATCGTGC+TGG 0.579116 3_2:+1867440 Msa0390780:CDS
ACTGCTGCTTGCAATCAGCA+GGG 0.579841 3_2:-1870632 None:intergenic
ACGGAAATTGAGTGGCACCC+AGG 0.582717 3_2:+1869301 Msa0390780:CDS
GCTCTTGGCTGGGGATCGTG+TGG 0.587567 3_2:+1867687 Msa0390780:CDS
GAAGGAATTACAAACGAAGC+AGG 0.588859 3_2:+1868747 Msa0390780:CDS
TGATAGAATAAACATAGCAA+TGG 0.594296 3_2:-1870992 None:intergenic
TGATGATGATGACGATGAAG+AGG 0.595217 3_2:+1870354 Msa0390780:CDS
TTGCAGTTAACCAAAAGCTA+GGG 0.595713 3_2:-1868897 None:intergenic
TTAACTGCAGAGTGGTAGCA+AGG 0.597517 3_2:+1870578 Msa0390780:intron
TCATCATCCTCGGGAATCTG+GGG 0.622634 3_2:-1869436 None:intergenic
GAAGGGGAAGAACAAGAGCA+AGG 0.624049 3_2:+1870411 Msa0390780:CDS
GAAGAAAGCAAAGCTGCTGA+AGG 0.627950 3_2:+1868777 Msa0390780:CDS
CAACCCTCCCCAGATTCCCG+AGG 0.628448 3_2:+1869429 Msa0390780:CDS
GAGTAAACTTGACAATCCCA+AGG 0.632238 3_2:+1869082 Msa0390780:CDS
GATCACTGAACGTGATGAGG+AGG 0.639093 3_2:+1869031 Msa0390780:intron
AGAAAACTGGCAAAGGAGGA+GGG 0.642577 3_2:-1867199 None:intergenic
ATTGTAGAACGGAAATTGAG+TGG 0.652316 3_2:+1869293 Msa0390780:intron
ATTACAAACGAAGCAGGACA+GGG 0.657529 3_2:+1868753 Msa0390780:CDS
ATAGATCACTGAACGTGATG+AGG 0.688272 3_2:+1869028 Msa0390780:intron
AGTAAACTTGACAATCCCAA+GGG 0.689310 3_2:+1869083 Msa0390780:CDS
GTGAACCATGACACAGCATG+AGG 0.722020 3_2:-1870253 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTCTCAAATTATTA+TGG + chr3_2:1868055-1868074 Msa0390780:intron 10.0%
!!! TTATTTTCTCAAATTATTAT+GGG + chr3_2:1868056-1868075 Msa0390780:intron 10.0%
!! AAGAATTAATATTAACTAAA+GGG + chr3_2:1870024-1870043 Msa0390780:intron 10.0%
!! AAAAGGAAAAAAAAAAAAAT+TGG + chr3_2:1870049-1870068 Msa0390780:intron 10.0%
!! AAAAAAAAAAAAATTGGAAA+AGG + chr3_2:1870055-1870074 Msa0390780:intron 10.0%
!!! TTTTATTTCTCATTTTTTAT+TGG + chr3_2:1870888-1870907 Msa0390780:three_prime_UTR 10.0%
!!! TTTATTTCTCATTTTTTATT+GGG + chr3_2:1870889-1870908 Msa0390780:three_prime_UTR 10.0%
!!! TTTATTTTCTCAAATTATTA+TGG + chr3_2:1868055-1868074 Msa0390780:intron 10.0%
!!! TTATTTTCTCAAATTATTAT+GGG + chr3_2:1868056-1868075 Msa0390780:intron 10.0%
!! AAGAATTAATATTAACTAAA+GGG + chr3_2:1870024-1870043 Msa0390780:intron 10.0%
!! AAAAGGAAAAAAAAAAAAAT+TGG + chr3_2:1870049-1870068 Msa0390780:intron 10.0%
!! AAAAAAAAAAAAATTGGAAA+AGG + chr3_2:1870055-1870074 Msa0390780:intron 10.0%
!!! TTTTATTTCTCATTTTTTAT+TGG + chr3_2:1870888-1870907 Msa0390780:three_prime_UTR 10.0%
!!! TTTATTTCTCATTTTTTATT+GGG + chr3_2:1870889-1870908 Msa0390780:three_prime_UTR 10.0%
!!! GCTATTTTTATAAGTTATAT+TGG - chr3_2:1868481-1868500 None:intergenic 15.0%
!! TATATGAAATAATTAACAGA+TGG - chr3_2:1868986-1869005 None:intergenic 15.0%
!!! CAATATCTTTTAATTTCTTA+GGG + chr3_2:1869222-1869241 Msa0390780:intron 15.0%
!! GAAGAATTAATATTAACTAA+AGG + chr3_2:1870023-1870042 Msa0390780:intron 15.0%
!! GAAGAATTAATATTAACTTA+AGG + chr3_2:1870082-1870101 Msa0390780:intron 15.0%
!! ATTAACTTAAGGAAAAAAAA+TGG + chr3_2:1870093-1870112 Msa0390780:intron 15.0%
!! GAAATAAAATCAATATCAAT+GGG - chr3_2:1870877-1870896 None:intergenic 15.0%
!! AGAAATAAAATCAATATCAA+TGG - chr3_2:1870878-1870897 None:intergenic 15.0%
!!! ATTTTTTATTGGGTTTTAAA+AGG + chr3_2:1870899-1870918 Msa0390780:three_prime_UTR 15.0%
!!! GCTATTTTTATAAGTTATAT+TGG - chr3_2:1868481-1868500 None:intergenic 15.0%
!! TATATGAAATAATTAACAGA+TGG - chr3_2:1868986-1869005 None:intergenic 15.0%
!!! CAATATCTTTTAATTTCTTA+GGG + chr3_2:1869222-1869241 Msa0390780:intron 15.0%
!! GAAGAATTAATATTAACTAA+AGG + chr3_2:1870023-1870042 Msa0390780:intron 15.0%
!! GAAGAATTAATATTAACTTA+AGG + chr3_2:1870082-1870101 Msa0390780:intron 15.0%
!! ATTAACTTAAGGAAAAAAAA+TGG + chr3_2:1870093-1870112 Msa0390780:intron 15.0%
!! GAAATAAAATCAATATCAAT+GGG - chr3_2:1870877-1870896 None:intergenic 15.0%
!! AGAAATAAAATCAATATCAA+TGG - chr3_2:1870878-1870897 None:intergenic 15.0%
!!! ATTTTTTATTGGGTTTTAAA+AGG + chr3_2:1870899-1870918 Msa0390780:three_prime_UTR 15.0%
!!! TATCTAAGTAATCAGAATTT+TGG + chr3_2:1867512-1867531 Msa0390780:intron 20.0%
!!! GTGATTAAATTATTTTGTCA+CGG + chr3_2:1867847-1867866 Msa0390780:intron 20.0%
!!! GTTTAATTTCTTTTTTGTTG+TGG + chr3_2:1868142-1868161 Msa0390780:intron 20.0%
!!! TTTCATTTTTACATTAGCAA+GGG + chr3_2:1868198-1868217 Msa0390780:intron 20.0%
!!! TATTATCTGTTGTTTGTTTA+TGG + chr3_2:1868685-1868704 Msa0390780:intron 20.0%
!! AATGAAGACTAATGAAATAT+TGG + chr3_2:1868918-1868937 Msa0390780:CDS 20.0%
!! ATGAAGACTAATGAAATATT+GGG + chr3_2:1868919-1868938 Msa0390780:CDS 20.0%
!!! CTATTGATTTCTCTAATATA+GGG - chr3_2:1869196-1869215 None:intergenic 20.0%
!! CTATATTAGAGAAATCAATA+GGG + chr3_2:1869195-1869214 Msa0390780:CDS 20.0%
!!! GCAATATCTTTTAATTTCTT+AGG + chr3_2:1869221-1869240 Msa0390780:intron 20.0%
!!! CATTTTTCTGTTTTTATGAT+TGG - chr3_2:1869388-1869407 None:intergenic 20.0%
!!! GAATTTACTCTGTTTTTATT+AGG + chr3_2:1869716-1869735 Msa0390780:intron 20.0%
!! GAACTGATATTAACTTAAAA+CGG + chr3_2:1869952-1869971 Msa0390780:intron 20.0%
!! GAAGAAGTAATATTAACTTA+AGG + chr3_2:1869979-1869998 Msa0390780:intron 20.0%
!! ATTAACTTAAGGAAAAAAGT+TGG + chr3_2:1869990-1870009 Msa0390780:intron 20.0%
!! ATATTAACTAAAGGGAAAAA+AGG + chr3_2:1870032-1870051 Msa0390780:intron 20.0%
!! TCAAAAAACAAAATAGTACT+AGG - chr3_2:1870185-1870204 None:intergenic 20.0%
!!! TAGTACTATTTTGTTTTTTG+AGG + chr3_2:1870184-1870203 Msa0390780:intron 20.0%
!! AGAACGAAAATATTAACAAA+AGG - chr3_2:1870823-1870842 None:intergenic 20.0%
!!! TATCTAAGTAATCAGAATTT+TGG + chr3_2:1867512-1867531 Msa0390780:intron 20.0%
!!! GTGATTAAATTATTTTGTCA+CGG + chr3_2:1867847-1867866 Msa0390780:intron 20.0%
!!! GTTTAATTTCTTTTTTGTTG+TGG + chr3_2:1868142-1868161 Msa0390780:intron 20.0%
!!! TTTCATTTTTACATTAGCAA+GGG + chr3_2:1868198-1868217 Msa0390780:intron 20.0%
!!! TATTATCTGTTGTTTGTTTA+TGG + chr3_2:1868685-1868704 Msa0390780:intron 20.0%
!! AATGAAGACTAATGAAATAT+TGG + chr3_2:1868918-1868937 Msa0390780:CDS 20.0%
!! ATGAAGACTAATGAAATATT+GGG + chr3_2:1868919-1868938 Msa0390780:CDS 20.0%
!!! CTATTGATTTCTCTAATATA+GGG - chr3_2:1869196-1869215 None:intergenic 20.0%
!! CTATATTAGAGAAATCAATA+GGG + chr3_2:1869195-1869214 Msa0390780:CDS 20.0%
!!! GCAATATCTTTTAATTTCTT+AGG + chr3_2:1869221-1869240 Msa0390780:intron 20.0%
!!! CATTTTTCTGTTTTTATGAT+TGG - chr3_2:1869388-1869407 None:intergenic 20.0%
!!! GAATTTACTCTGTTTTTATT+AGG + chr3_2:1869716-1869735 Msa0390780:intron 20.0%
!! GAACTGATATTAACTTAAAA+CGG + chr3_2:1869952-1869971 Msa0390780:intron 20.0%
!! GAAGAAGTAATATTAACTTA+AGG + chr3_2:1869979-1869998 Msa0390780:intron 20.0%
!! ATTAACTTAAGGAAAAAAGT+TGG + chr3_2:1869990-1870009 Msa0390780:intron 20.0%
!! ATATTAACTAAAGGGAAAAA+AGG + chr3_2:1870032-1870051 Msa0390780:intron 20.0%
!! TCAAAAAACAAAATAGTACT+AGG - chr3_2:1870185-1870204 None:intergenic 20.0%
!!! TAGTACTATTTTGTTTTTTG+AGG + chr3_2:1870184-1870203 Msa0390780:intron 20.0%
!! AGAACGAAAATATTAACAAA+AGG - chr3_2:1870823-1870842 None:intergenic 20.0%
! ATGAAAGAAATGAAGAAAAC+TGG - chr3_2:1867215-1867234 None:intergenic 25.0%
!!! AGTAGTTGATAAAGTTACTA+GGG - chr3_2:1867340-1867359 None:intergenic 25.0%
!!! TAGTAGTTGATAAAGTTACT+AGG - chr3_2:1867341-1867360 None:intergenic 25.0%
!! GGATAATGATTTTGAATTAG+AGG - chr3_2:1867369-1867388 None:intergenic 25.0%
! TATCCAATTGATTAAAACCT+AGG + chr3_2:1867384-1867403 Msa0390780:intron 25.0%
!! AAACTATAGTGTTGTTATGA+TGG + chr3_2:1867570-1867589 Msa0390780:intron 25.0%
!!! GTTTCATTTTTACATTAGCA+AGG + chr3_2:1868197-1868216 Msa0390780:intron 25.0%
! CCAATAGATAAGCTAAAATA+AGG - chr3_2:1868370-1868389 None:intergenic 25.0%
!!! CCTTATTTTAGCTTATCTAT+TGG + chr3_2:1868367-1868386 Msa0390780:intron 25.0%
!!! GTTTACATAAGCTATTTTCA+TGG - chr3_2:1868547-1868566 None:intergenic 25.0%
! TTGTTTGTTTATGGTTATAG+AGG + chr3_2:1868694-1868713 Msa0390780:intron 25.0%
!!! CCTATTGATTTCTCTAATAT+AGG - chr3_2:1869197-1869216 None:intergenic 25.0%
! CCTATATTAGAGAAATCAAT+AGG + chr3_2:1869194-1869213 Msa0390780:CDS 25.0%
!!! TTCTGTTTTTATGATTGGTT+TGG - chr3_2:1869383-1869402 None:intergenic 25.0%
! TGAAGAGCTTCAAAATTTAA+TGG + chr3_2:1869564-1869583 Msa0390780:CDS 25.0%
!!! ACTCTGTTTTTATTAGGATT+AGG + chr3_2:1869722-1869741 Msa0390780:intron 25.0%
!! TTTTTATTAGGATTAGGAAG+AGG + chr3_2:1869728-1869747 Msa0390780:intron 25.0%
!! TTTCAACTAATACTTTTGAG+TGG - chr3_2:1869814-1869833 None:intergenic 25.0%
!!! ACTCAAAAGTATTAGTTGAA+AGG + chr3_2:1869813-1869832 Msa0390780:intron 25.0%
! TTAAGGAAAAAAGTTGGAAA+AGG + chr3_2:1869996-1870015 Msa0390780:intron 25.0%
! AACTTAAGGAAAAAAAATGG+TGG + chr3_2:1870096-1870115 Msa0390780:intron 25.0%
! ACTTAAGGAAAAAAAATGGT+GGG + chr3_2:1870097-1870116 Msa0390780:intron 25.0%
! TATAATTACTGTTAGAGTCT+GGG + chr3_2:1870735-1870754 Msa0390780:three_prime_UTR 25.0%
!! AGTTTTACATTAATATGGTG+AGG + chr3_2:1870779-1870798 Msa0390780:three_prime_UTR 25.0%
! ATATTAACAAAAGGAAAGAC+AGG - chr3_2:1870814-1870833 None:intergenic 25.0%
! TGATAGAATAAACATAGCAA+TGG - chr3_2:1870995-1871014 None:intergenic 25.0%
! ATCCCAAATTGTTTATCTTT+GGG - chr3_2:1871092-1871111 None:intergenic 25.0%
! TATCCCAAATTGTTTATCTT+TGG - chr3_2:1871093-1871112 None:intergenic 25.0%
! ATGAAAGAAATGAAGAAAAC+TGG - chr3_2:1867215-1867234 None:intergenic 25.0%
!!! AGTAGTTGATAAAGTTACTA+GGG - chr3_2:1867340-1867359 None:intergenic 25.0%
!!! TAGTAGTTGATAAAGTTACT+AGG - chr3_2:1867341-1867360 None:intergenic 25.0%
!! GGATAATGATTTTGAATTAG+AGG - chr3_2:1867369-1867388 None:intergenic 25.0%
! TATCCAATTGATTAAAACCT+AGG + chr3_2:1867384-1867403 Msa0390780:intron 25.0%
!! AAACTATAGTGTTGTTATGA+TGG + chr3_2:1867570-1867589 Msa0390780:intron 25.0%
!!! GTTTCATTTTTACATTAGCA+AGG + chr3_2:1868197-1868216 Msa0390780:intron 25.0%
! CCAATAGATAAGCTAAAATA+AGG - chr3_2:1868370-1868389 None:intergenic 25.0%
!!! CCTTATTTTAGCTTATCTAT+TGG + chr3_2:1868367-1868386 Msa0390780:intron 25.0%
!!! GTTTACATAAGCTATTTTCA+TGG - chr3_2:1868547-1868566 None:intergenic 25.0%
! TTGTTTGTTTATGGTTATAG+AGG + chr3_2:1868694-1868713 Msa0390780:intron 25.0%
!!! CCTATTGATTTCTCTAATAT+AGG - chr3_2:1869197-1869216 None:intergenic 25.0%
! CCTATATTAGAGAAATCAAT+AGG + chr3_2:1869194-1869213 Msa0390780:CDS 25.0%
!!! TTCTGTTTTTATGATTGGTT+TGG - chr3_2:1869383-1869402 None:intergenic 25.0%
! TGAAGAGCTTCAAAATTTAA+TGG + chr3_2:1869564-1869583 Msa0390780:CDS 25.0%
!!! ACTCTGTTTTTATTAGGATT+AGG + chr3_2:1869722-1869741 Msa0390780:intron 25.0%
!! TTTTTATTAGGATTAGGAAG+AGG + chr3_2:1869728-1869747 Msa0390780:intron 25.0%
!! TTTCAACTAATACTTTTGAG+TGG - chr3_2:1869814-1869833 None:intergenic 25.0%
!!! ACTCAAAAGTATTAGTTGAA+AGG + chr3_2:1869813-1869832 Msa0390780:intron 25.0%
! TTAAGGAAAAAAGTTGGAAA+AGG + chr3_2:1869996-1870015 Msa0390780:intron 25.0%
! AACTTAAGGAAAAAAAATGG+TGG + chr3_2:1870096-1870115 Msa0390780:intron 25.0%
! ACTTAAGGAAAAAAAATGGT+GGG + chr3_2:1870097-1870116 Msa0390780:intron 25.0%
! TATAATTACTGTTAGAGTCT+GGG + chr3_2:1870735-1870754 Msa0390780:three_prime_UTR 25.0%
!! AGTTTTACATTAATATGGTG+AGG + chr3_2:1870779-1870798 Msa0390780:three_prime_UTR 25.0%
! ATATTAACAAAAGGAAAGAC+AGG - chr3_2:1870814-1870833 None:intergenic 25.0%
! TGATAGAATAAACATAGCAA+TGG - chr3_2:1870995-1871014 None:intergenic 25.0%
! ATCCCAAATTGTTTATCTTT+GGG - chr3_2:1871092-1871111 None:intergenic 25.0%
! TATCCCAAATTGTTTATCTT+TGG - chr3_2:1871093-1871112 None:intergenic 25.0%
GAAAGTGAAATTGATGTTAC+CGG - chr3_2:1867276-1867295 None:intergenic 30.0%
!! AGACCTAGGTTTTAATCAAT+TGG - chr3_2:1867390-1867409 None:intergenic 30.0%
CAACAGTATAATTTAGACCT+AGG - chr3_2:1867404-1867423 None:intergenic 30.0%
!!! ATTTTTTACTGTTCCCTTTG+TGG + chr3_2:1867621-1867640 Msa0390780:intron 30.0%
TTCACAAACAATTCCACAAA+GGG - chr3_2:1867637-1867656 None:intergenic 30.0%
TTTCACAAACAATTCCACAA+AGG - chr3_2:1867638-1867657 None:intergenic 30.0%
TTGTCACGGATACAAATATT+TGG + chr3_2:1867861-1867880 Msa0390780:intron 30.0%
TGTCACGGATACAAATATTT+GGG + chr3_2:1867862-1867881 Msa0390780:intron 30.0%
TTGAACGTAATCACATGTAT+CGG - chr3_2:1868031-1868050 None:intergenic 30.0%
!! ATTGGAGAGTAAGTTTTTAG+AGG + chr3_2:1868272-1868291 Msa0390780:intron 30.0%
TTATGAACCACTTTACACAA+AGG + chr3_2:1868329-1868348 Msa0390780:intron 30.0%
TATAAGTTGTTTGTCCAAAC+AGG + chr3_2:1868603-1868622 Msa0390780:intron 30.0%
ATCAGAAAATTAGACACTAC+GGG - chr3_2:1868629-1868648 None:intergenic 30.0%
CATCAGAAAATTAGACACTA+CGG - chr3_2:1868630-1868649 None:intergenic 30.0%
GTATCAAAGGAGAATGTATA+TGG - chr3_2:1868841-1868860 None:intergenic 30.0%
AAGATTCAGGATAGTATCAA+AGG - chr3_2:1868854-1868873 None:intergenic 30.0%
CTGAATTATACGAAAGATTC+AGG - chr3_2:1868867-1868886 None:intergenic 30.0%
CTTTCGTATAATTCAGAGAA+AGG + chr3_2:1868871-1868890 Msa0390780:intron 30.0%
TAATGAAATATTGGGTGAAG+AGG + chr3_2:1868927-1868946 Msa0390780:CDS 30.0%
AGTATCTCAAAGATATCAAG+TGG + chr3_2:1869060-1869079 Msa0390780:CDS 30.0%
! TTTTTGTTAGCACGGAATTT+TGG - chr3_2:1869148-1869167 None:intergenic 30.0%
!! GTGATATGTTTTTGTTAGCA+CGG - chr3_2:1869156-1869175 None:intergenic 30.0%
TTTGCTTGAACATTGTAGAA+CGG + chr3_2:1869282-1869301 Msa0390780:intron 30.0%
!!! GCATTTTTTGATCCTTTCTT+TGG - chr3_2:1869361-1869380 None:intergenic 30.0%
ATGGAGCATGATTATGATAT+TGG + chr3_2:1869583-1869602 Msa0390780:CDS 30.0%
TGGAGCATGATTATGATATT+GGG + chr3_2:1869584-1869603 Msa0390780:CDS 30.0%
! TCTTATTCTTTTGATGTGAG+TGG + chr3_2:1869637-1869656 Msa0390780:intron 30.0%
TGAAGCCATGATTATGATAT+TGG + chr3_2:1869660-1869679 Msa0390780:intron 30.0%
GGATACCAATATCATAATCA+TGG - chr3_2:1869668-1869687 None:intergenic 30.0%
CTTAAGGAAAAAAAATGGTG+GGG + chr3_2:1870098-1870117 Msa0390780:intron 30.0%
TTAAGGAAAAAAAATGGTGG+GGG + chr3_2:1870099-1870118 Msa0390780:intron 30.0%
! CATGAGGAATAATTTTGTCT+CGG - chr3_2:1870240-1870259 None:intergenic 30.0%
TTAACTCTCTGCTAAACTAT+GGG + chr3_2:1870519-1870538 Msa0390780:intron 30.0%
ACACAACTAAACATATATCC+AGG - chr3_2:1870681-1870700 None:intergenic 30.0%
CTGACAAAAAACATATATCC+AGG - chr3_2:1870712-1870731 None:intergenic 30.0%
!!! GGATATATGTTTTTTGTCAG+TGG + chr3_2:1870712-1870731 Msa0390780:three_prime_UTR 30.0%
GTATAATTACTGTTAGAGTC+TGG + chr3_2:1870734-1870753 Msa0390780:three_prime_UTR 30.0%
! GCTGCAGTTTTACATTAATA+TGG + chr3_2:1870774-1870793 Msa0390780:three_prime_UTR 30.0%
! TAATATTTTCGTTCTCTGCT+TGG + chr3_2:1870828-1870847 Msa0390780:three_prime_UTR 30.0%
! AATATTTTCGTTCTCTGCTT+GGG + chr3_2:1870829-1870848 Msa0390780:three_prime_UTR 30.0%
TTCCCCAAAGATAAACAATT+TGG + chr3_2:1871086-1871105 Msa0390780:three_prime_UTR 30.0%
TCCCCAAAGATAAACAATTT+GGG + chr3_2:1871087-1871106 Msa0390780:three_prime_UTR 30.0%
TCCCAAATTGTTTATCTTTG+GGG - chr3_2:1871091-1871110 None:intergenic 30.0%
ATCACAGTAATATCATGTCT+CGG - chr3_2:1871137-1871156 None:intergenic 30.0%
GAAAGTGAAATTGATGTTAC+CGG - chr3_2:1867276-1867295 None:intergenic 30.0%
!! AGACCTAGGTTTTAATCAAT+TGG - chr3_2:1867390-1867409 None:intergenic 30.0%
CAACAGTATAATTTAGACCT+AGG - chr3_2:1867404-1867423 None:intergenic 30.0%
!!! ATTTTTTACTGTTCCCTTTG+TGG + chr3_2:1867621-1867640 Msa0390780:intron 30.0%
TTCACAAACAATTCCACAAA+GGG - chr3_2:1867637-1867656 None:intergenic 30.0%
TTTCACAAACAATTCCACAA+AGG - chr3_2:1867638-1867657 None:intergenic 30.0%
TTGTCACGGATACAAATATT+TGG + chr3_2:1867861-1867880 Msa0390780:intron 30.0%
TGTCACGGATACAAATATTT+GGG + chr3_2:1867862-1867881 Msa0390780:intron 30.0%
TTGAACGTAATCACATGTAT+CGG - chr3_2:1868031-1868050 None:intergenic 30.0%
!! ATTGGAGAGTAAGTTTTTAG+AGG + chr3_2:1868272-1868291 Msa0390780:intron 30.0%
TTATGAACCACTTTACACAA+AGG + chr3_2:1868329-1868348 Msa0390780:intron 30.0%
TATAAGTTGTTTGTCCAAAC+AGG + chr3_2:1868603-1868622 Msa0390780:intron 30.0%
ATCAGAAAATTAGACACTAC+GGG - chr3_2:1868629-1868648 None:intergenic 30.0%
CATCAGAAAATTAGACACTA+CGG - chr3_2:1868630-1868649 None:intergenic 30.0%
GTATCAAAGGAGAATGTATA+TGG - chr3_2:1868841-1868860 None:intergenic 30.0%
AAGATTCAGGATAGTATCAA+AGG - chr3_2:1868854-1868873 None:intergenic 30.0%
CTGAATTATACGAAAGATTC+AGG - chr3_2:1868867-1868886 None:intergenic 30.0%
CTTTCGTATAATTCAGAGAA+AGG + chr3_2:1868871-1868890 Msa0390780:intron 30.0%
TAATGAAATATTGGGTGAAG+AGG + chr3_2:1868927-1868946 Msa0390780:CDS 30.0%
AGTATCTCAAAGATATCAAG+TGG + chr3_2:1869060-1869079 Msa0390780:CDS 30.0%
! TTTTTGTTAGCACGGAATTT+TGG - chr3_2:1869148-1869167 None:intergenic 30.0%
!! GTGATATGTTTTTGTTAGCA+CGG - chr3_2:1869156-1869175 None:intergenic 30.0%
TTTGCTTGAACATTGTAGAA+CGG + chr3_2:1869282-1869301 Msa0390780:intron 30.0%
!!! GCATTTTTTGATCCTTTCTT+TGG - chr3_2:1869361-1869380 None:intergenic 30.0%
ATGGAGCATGATTATGATAT+TGG + chr3_2:1869583-1869602 Msa0390780:CDS 30.0%
TGGAGCATGATTATGATATT+GGG + chr3_2:1869584-1869603 Msa0390780:CDS 30.0%
! TCTTATTCTTTTGATGTGAG+TGG + chr3_2:1869637-1869656 Msa0390780:intron 30.0%
TGAAGCCATGATTATGATAT+TGG + chr3_2:1869660-1869679 Msa0390780:intron 30.0%
GGATACCAATATCATAATCA+TGG - chr3_2:1869668-1869687 None:intergenic 30.0%
CTTAAGGAAAAAAAATGGTG+GGG + chr3_2:1870098-1870117 Msa0390780:intron 30.0%
TTAAGGAAAAAAAATGGTGG+GGG + chr3_2:1870099-1870118 Msa0390780:intron 30.0%
! CATGAGGAATAATTTTGTCT+CGG - chr3_2:1870240-1870259 None:intergenic 30.0%
TTAACTCTCTGCTAAACTAT+GGG + chr3_2:1870519-1870538 Msa0390780:intron 30.0%
ACACAACTAAACATATATCC+AGG - chr3_2:1870681-1870700 None:intergenic 30.0%
CTGACAAAAAACATATATCC+AGG - chr3_2:1870712-1870731 None:intergenic 30.0%
!!! GGATATATGTTTTTTGTCAG+TGG + chr3_2:1870712-1870731 Msa0390780:three_prime_UTR 30.0%
GTATAATTACTGTTAGAGTC+TGG + chr3_2:1870734-1870753 Msa0390780:three_prime_UTR 30.0%
! GCTGCAGTTTTACATTAATA+TGG + chr3_2:1870774-1870793 Msa0390780:three_prime_UTR 30.0%
! TAATATTTTCGTTCTCTGCT+TGG + chr3_2:1870828-1870847 Msa0390780:three_prime_UTR 30.0%
! AATATTTTCGTTCTCTGCTT+GGG + chr3_2:1870829-1870848 Msa0390780:three_prime_UTR 30.0%
TTCCCCAAAGATAAACAATT+TGG + chr3_2:1871086-1871105 Msa0390780:three_prime_UTR 30.0%
TCCCCAAAGATAAACAATTT+GGG + chr3_2:1871087-1871106 Msa0390780:three_prime_UTR 30.0%
TCCCAAATTGTTTATCTTTG+GGG - chr3_2:1871091-1871110 None:intergenic 30.0%
ATCACAGTAATATCATGTCT+CGG - chr3_2:1871137-1871156 None:intergenic 30.0%
GAAATGAAGAAAACTGGCAA+AGG - chr3_2:1867209-1867228 None:intergenic 35.0%
GTGATGACAAGAATGAGAAA+TGG - chr3_2:1867300-1867319 None:intergenic 35.0%
!! GAAATGTTTGCTGTTTCTGT+AGG + chr3_2:1867654-1867673 Msa0390780:intron 35.0%
ATCATCCTCCTTCTATCTAT+TGG + chr3_2:1867777-1867796 Msa0390780:intron 35.0%
ATGAGACACCAATAGATAGA+AGG - chr3_2:1867788-1867807 None:intergenic 35.0%
GTCACGGATACAAATATTTG+GGG + chr3_2:1867863-1867882 Msa0390780:intron 35.0%
ACAAATATTTGGGGATTGCT+TGG + chr3_2:1867872-1867891 Msa0390780:intron 35.0%
GCTACTCATTATAGAACACA+AGG - chr3_2:1867958-1867977 None:intergenic 35.0%
!! TACTCAATGAAGCATTGACA+AGG - chr3_2:1868114-1868133 None:intergenic 35.0%
AAAGTGGTTCATAAAGCTTC+TGG - chr3_2:1868323-1868342 None:intergenic 35.0%
! TTTACACAAAGGTGTGTGTT+TGG + chr3_2:1868340-1868359 Msa0390780:intron 35.0%
! ATACATTTTGCGACACTGTT+TGG + chr3_2:1868391-1868410 Msa0390780:intron 35.0%
! TACATTTTGCGACACTGTTT+GGG + chr3_2:1868392-1868411 Msa0390780:intron 35.0%
! CGTAGTGTCTAATTTTCTGA+TGG + chr3_2:1868628-1868647 Msa0390780:intron 35.0%
AGTTACTTCCTGTTTCACTA+CGG + chr3_2:1868651-1868670 Msa0390780:intron 35.0%
AATTGTAACCGTAGTGAAAC+AGG - chr3_2:1868662-1868681 None:intergenic 35.0%
!! AATGGTGTTATTGACGTTGA+AGG + chr3_2:1868729-1868748 Msa0390780:CDS 35.0%
!! TTAGTCTTGTTCAACAGTGT+AGG + chr3_2:1868809-1868828 Msa0390780:intron 35.0%
TTGCAGTTAACCAAAAGCTA+GGG - chr3_2:1868900-1868919 None:intergenic 35.0%
ATTGCAGTTAACCAAAAGCT+AGG - chr3_2:1868901-1868920 None:intergenic 35.0%
ATCTATCACAGAAAATGGCA+TGG - chr3_2:1869014-1869033 None:intergenic 35.0%
CAGTGATCTATCACAGAAAA+TGG - chr3_2:1869019-1869038 None:intergenic 35.0%
AGTAAACTTGACAATCCCAA+GGG + chr3_2:1869083-1869102 Msa0390780:CDS 35.0%
!! AGCACGGAATTTTGGAAATA+AGG - chr3_2:1869140-1869159 None:intergenic 35.0%
ATTGTAGAACGGAAATTGAG+TGG + chr3_2:1869293-1869312 Msa0390780:intron 35.0%
CACAAAAGGTTATGAAGAAG+AGG + chr3_2:1869335-1869354 Msa0390780:CDS 35.0%
ATCAATTTCGTCATCATCCT+CGG - chr3_2:1869449-1869468 None:intergenic 35.0%
GGGATACAGATTCCTTAATT+CGG + chr3_2:1870436-1870455 Msa0390780:intron 35.0%
CAGAATCCACAATCAGTAAT+CGG - chr3_2:1870485-1870504 None:intergenic 35.0%
CTTAACTCTCTGCTAAACTA+TGG + chr3_2:1870518-1870537 Msa0390780:intron 35.0%
AGTGTATCAAATTCTGCGAT+CGG + chr3_2:1871026-1871045 Msa0390780:three_prime_UTR 35.0%
TCACAGTAATATCATGTCTC+GGG - chr3_2:1871136-1871155 None:intergenic 35.0%
GAAATGAAGAAAACTGGCAA+AGG - chr3_2:1867209-1867228 None:intergenic 35.0%
GTGATGACAAGAATGAGAAA+TGG - chr3_2:1867300-1867319 None:intergenic 35.0%
!! GAAATGTTTGCTGTTTCTGT+AGG + chr3_2:1867654-1867673 Msa0390780:intron 35.0%
ATCATCCTCCTTCTATCTAT+TGG + chr3_2:1867777-1867796 Msa0390780:intron 35.0%
ATGAGACACCAATAGATAGA+AGG - chr3_2:1867788-1867807 None:intergenic 35.0%
GTCACGGATACAAATATTTG+GGG + chr3_2:1867863-1867882 Msa0390780:intron 35.0%
ACAAATATTTGGGGATTGCT+TGG + chr3_2:1867872-1867891 Msa0390780:intron 35.0%
GCTACTCATTATAGAACACA+AGG - chr3_2:1867958-1867977 None:intergenic 35.0%
!! TACTCAATGAAGCATTGACA+AGG - chr3_2:1868114-1868133 None:intergenic 35.0%
AAAGTGGTTCATAAAGCTTC+TGG - chr3_2:1868323-1868342 None:intergenic 35.0%
! TTTACACAAAGGTGTGTGTT+TGG + chr3_2:1868340-1868359 Msa0390780:intron 35.0%
! ATACATTTTGCGACACTGTT+TGG + chr3_2:1868391-1868410 Msa0390780:intron 35.0%
! TACATTTTGCGACACTGTTT+GGG + chr3_2:1868392-1868411 Msa0390780:intron 35.0%
! CGTAGTGTCTAATTTTCTGA+TGG + chr3_2:1868628-1868647 Msa0390780:intron 35.0%
AGTTACTTCCTGTTTCACTA+CGG + chr3_2:1868651-1868670 Msa0390780:intron 35.0%
AATTGTAACCGTAGTGAAAC+AGG - chr3_2:1868662-1868681 None:intergenic 35.0%
!! AATGGTGTTATTGACGTTGA+AGG + chr3_2:1868729-1868748 Msa0390780:CDS 35.0%
!! TTAGTCTTGTTCAACAGTGT+AGG + chr3_2:1868809-1868828 Msa0390780:intron 35.0%
TTGCAGTTAACCAAAAGCTA+GGG - chr3_2:1868900-1868919 None:intergenic 35.0%
ATTGCAGTTAACCAAAAGCT+AGG - chr3_2:1868901-1868920 None:intergenic 35.0%
ATCTATCACAGAAAATGGCA+TGG - chr3_2:1869014-1869033 None:intergenic 35.0%
CAGTGATCTATCACAGAAAA+TGG - chr3_2:1869019-1869038 None:intergenic 35.0%
AGTAAACTTGACAATCCCAA+GGG + chr3_2:1869083-1869102 Msa0390780:CDS 35.0%
!! AGCACGGAATTTTGGAAATA+AGG - chr3_2:1869140-1869159 None:intergenic 35.0%
ATTGTAGAACGGAAATTGAG+TGG + chr3_2:1869293-1869312 Msa0390780:intron 35.0%
CACAAAAGGTTATGAAGAAG+AGG + chr3_2:1869335-1869354 Msa0390780:CDS 35.0%
ATCAATTTCGTCATCATCCT+CGG - chr3_2:1869449-1869468 None:intergenic 35.0%
GGGATACAGATTCCTTAATT+CGG + chr3_2:1870436-1870455 Msa0390780:intron 35.0%
CAGAATCCACAATCAGTAAT+CGG - chr3_2:1870485-1870504 None:intergenic 35.0%
CTTAACTCTCTGCTAAACTA+TGG + chr3_2:1870518-1870537 Msa0390780:intron 35.0%
AGTGTATCAAATTCTGCGAT+CGG + chr3_2:1871026-1871045 Msa0390780:three_prime_UTR 35.0%
TCACAGTAATATCATGTCTC+GGG - chr3_2:1871136-1871155 None:intergenic 35.0%
ATGAAGAAAACTGGCAAAGG+AGG - chr3_2:1867206-1867225 None:intergenic 40.0%
AGTGAAATTGATGTTACCGG+CGG - chr3_2:1867273-1867292 None:intergenic 40.0%
AAACACTTTCGCCTAATGTC+AGG + chr3_2:1867719-1867738 Msa0390780:CDS 40.0%
! TGAGGTTCTCAAAGTTTTGC+AGG + chr3_2:1867750-1867769 Msa0390780:CDS 40.0%
AGACACCAATAGATAGAAGG+AGG - chr3_2:1867785-1867804 None:intergenic 40.0%
! ACACCTTCGATTAGAAGTGT+CGG - chr3_2:1867993-1868012 None:intergenic 40.0%
ACACACACCTTTGTGTAAAG+TGG - chr3_2:1868339-1868358 None:intergenic 40.0%
GGACAAACAACTTATAGCAC+AGG - chr3_2:1868599-1868618 None:intergenic 40.0%
! TAGAGGTACGAGATTGTCAA+TGG + chr3_2:1868711-1868730 Msa0390780:intron 40.0%
GAAGGAATTACAAACGAAGC+AGG + chr3_2:1868747-1868766 Msa0390780:CDS 40.0%
AATTACAAACGAAGCAGGAC+AGG + chr3_2:1868752-1868771 Msa0390780:CDS 40.0%
ATTACAAACGAAGCAGGACA+GGG + chr3_2:1868753-1868772 Msa0390780:CDS 40.0%
ATAGATCACTGAACGTGATG+AGG + chr3_2:1869028-1869047 Msa0390780:intron 40.0%
GAGTAAACTTGACAATCCCA+AGG + chr3_2:1869082-1869101 Msa0390780:CDS 40.0%
TTTGTGTCAAGCACTTTCCT+GGG - chr3_2:1869321-1869340 None:intergenic 40.0%
! TTTTGTGTCAAGCACTTTCC+TGG - chr3_2:1869322-1869341 None:intergenic 40.0%
!! AGGAAAGTGCTTGACACAAA+AGG + chr3_2:1869321-1869340 Msa0390780:CDS 40.0%
ATGAAGAAGAGGCCAAAGAA+AGG + chr3_2:1869346-1869365 Msa0390780:CDS 40.0%
TCAATTTCGTCATCATCCTC+GGG - chr3_2:1869448-1869467 None:intergenic 40.0%
!! TTGGTATCCGTTAGTCTTGA+TGG + chr3_2:1869679-1869698 Msa0390780:intron 40.0%
GTTGAGTGCAAAACTGCTTA+TGG + chr3_2:1869849-1869868 Msa0390780:intron 40.0%
AGCATGAATTGTCTTCCTTC+CGG - chr3_2:1870156-1870175 None:intergenic 40.0%
TTATTCCTCATGCTGTGTCA+TGG + chr3_2:1870248-1870267 Msa0390780:CDS 40.0%
AGACAGAGATGAAGATGAAG+AGG + chr3_2:1870330-1870349 Msa0390780:CDS 40.0%
! TGATGATGATGACGATGAAG+AGG + chr3_2:1870354-1870373 Msa0390780:CDS 40.0%
CAGCAGATTATGCCGAATTA+AGG - chr3_2:1870451-1870470 None:intergenic 40.0%
! TCAGATCCGATTACTGATTG+TGG + chr3_2:1870476-1870495 Msa0390780:intron 40.0%
TCTGCTAAACTATGGGTAAC+TGG + chr3_2:1870526-1870545 Msa0390780:intron 40.0%
TGTTTGTCTTAACTGCAGAG+TGG + chr3_2:1870570-1870589 Msa0390780:intron 40.0%
TGACTGATCTTTACCAGGTT+TGG - chr3_2:1870604-1870623 None:intergenic 40.0%
TCAGTTGACTGATCTTTACC+AGG - chr3_2:1870609-1870628 None:intergenic 40.0%
TTAGTTGTGTGCAACATTCC+TGG + chr3_2:1870660-1870679 Msa0390780:three_prime_UTR 40.0%
TTAGTTGTGTGCAACATTCC+TGG + chr3_2:1870660-1870679 Msa0390780:three_prime_UTR 40.0%
!!! GGTTTTAAAAGGAAGTGACG+AGG + chr3_2:1870910-1870929 Msa0390780:three_prime_UTR 40.0%
ATGAAGAAAACTGGCAAAGG+AGG - chr3_2:1867206-1867225 None:intergenic 40.0%
AGTGAAATTGATGTTACCGG+CGG - chr3_2:1867273-1867292 None:intergenic 40.0%
AAACACTTTCGCCTAATGTC+AGG + chr3_2:1867719-1867738 Msa0390780:CDS 40.0%
! TGAGGTTCTCAAAGTTTTGC+AGG + chr3_2:1867750-1867769 Msa0390780:CDS 40.0%
AGACACCAATAGATAGAAGG+AGG - chr3_2:1867785-1867804 None:intergenic 40.0%
! ACACCTTCGATTAGAAGTGT+CGG - chr3_2:1867993-1868012 None:intergenic 40.0%
ACACACACCTTTGTGTAAAG+TGG - chr3_2:1868339-1868358 None:intergenic 40.0%
GGACAAACAACTTATAGCAC+AGG - chr3_2:1868599-1868618 None:intergenic 40.0%
! TAGAGGTACGAGATTGTCAA+TGG + chr3_2:1868711-1868730 Msa0390780:intron 40.0%
GAAGGAATTACAAACGAAGC+AGG + chr3_2:1868747-1868766 Msa0390780:CDS 40.0%
AATTACAAACGAAGCAGGAC+AGG + chr3_2:1868752-1868771 Msa0390780:CDS 40.0%
ATTACAAACGAAGCAGGACA+GGG + chr3_2:1868753-1868772 Msa0390780:CDS 40.0%
ATAGATCACTGAACGTGATG+AGG + chr3_2:1869028-1869047 Msa0390780:intron 40.0%
GAGTAAACTTGACAATCCCA+AGG + chr3_2:1869082-1869101 Msa0390780:CDS 40.0%
TTTGTGTCAAGCACTTTCCT+GGG - chr3_2:1869321-1869340 None:intergenic 40.0%
! TTTTGTGTCAAGCACTTTCC+TGG - chr3_2:1869322-1869341 None:intergenic 40.0%
!! AGGAAAGTGCTTGACACAAA+AGG + chr3_2:1869321-1869340 Msa0390780:CDS 40.0%
ATGAAGAAGAGGCCAAAGAA+AGG + chr3_2:1869346-1869365 Msa0390780:CDS 40.0%
TCAATTTCGTCATCATCCTC+GGG - chr3_2:1869448-1869467 None:intergenic 40.0%
!! TTGGTATCCGTTAGTCTTGA+TGG + chr3_2:1869679-1869698 Msa0390780:intron 40.0%
GTTGAGTGCAAAACTGCTTA+TGG + chr3_2:1869849-1869868 Msa0390780:intron 40.0%
AGCATGAATTGTCTTCCTTC+CGG - chr3_2:1870156-1870175 None:intergenic 40.0%
TTATTCCTCATGCTGTGTCA+TGG + chr3_2:1870248-1870267 Msa0390780:CDS 40.0%
AGACAGAGATGAAGATGAAG+AGG + chr3_2:1870330-1870349 Msa0390780:CDS 40.0%
! TGATGATGATGACGATGAAG+AGG + chr3_2:1870354-1870373 Msa0390780:CDS 40.0%
CAGCAGATTATGCCGAATTA+AGG - chr3_2:1870451-1870470 None:intergenic 40.0%
! TCAGATCCGATTACTGATTG+TGG + chr3_2:1870476-1870495 Msa0390780:intron 40.0%
TCTGCTAAACTATGGGTAAC+TGG + chr3_2:1870526-1870545 Msa0390780:intron 40.0%
TGTTTGTCTTAACTGCAGAG+TGG + chr3_2:1870570-1870589 Msa0390780:intron 40.0%
TGACTGATCTTTACCAGGTT+TGG - chr3_2:1870604-1870623 None:intergenic 40.0%
TCAGTTGACTGATCTTTACC+AGG - chr3_2:1870609-1870628 None:intergenic 40.0%
TTAGTTGTGTGCAACATTCC+TGG + chr3_2:1870660-1870679 Msa0390780:three_prime_UTR 40.0%
TTAGTTGTGTGCAACATTCC+TGG + chr3_2:1870660-1870679 Msa0390780:three_prime_UTR 40.0%
!!! GGTTTTAAAAGGAAGTGACG+AGG + chr3_2:1870910-1870929 Msa0390780:three_prime_UTR 40.0%
AGAAAACTGGCAAAGGAGGA+GGG - chr3_2:1867202-1867221 None:intergenic 45.0%
AAGAAAACTGGCAAAGGAGG+AGG - chr3_2:1867203-1867222 None:intergenic 45.0%
GTAGGATAAGCTTCAGCTCT+TGG + chr3_2:1867672-1867691 Msa0390780:intron 45.0%
ATAAGCTTCAGCTCTTGGCT+GGG + chr3_2:1867677-1867696 Msa0390780:CDS 45.0%
TCAACACGTTGCCTGACATT+AGG - chr3_2:1867733-1867752 None:intergenic 45.0%
TAATGTCAGGCAACGTGTTG+AGG + chr3_2:1867732-1867751 Msa0390780:CDS 45.0%
! TTAGCCTGTTTTCGTGTGTG+TGG + chr3_2:1867809-1867828 Msa0390780:intron 45.0%
!! TAGAAGTGTCGGTGCTACAA+AGG - chr3_2:1867982-1868001 None:intergenic 45.0%
!! CATGTATCGGTGTCAGACAT+AGG - chr3_2:1868018-1868037 None:intergenic 45.0%
GCAGAGCGAACATGATGAAT+TGG + chr3_2:1868254-1868273 Msa0390780:intron 45.0%
GCACAGGCACTTATCATGAT+AGG - chr3_2:1868583-1868602 None:intergenic 45.0%
GAAGAAAGCAAAGCTGCTGA+AGG + chr3_2:1868777-1868796 Msa0390780:CDS 45.0%
!! AGAAAGGAGTCCCTAGCTTT+TGG + chr3_2:1868887-1868906 Msa0390780:CDS 45.0%
AACTCCAGCTTGAAACCCTT+GGG - chr3_2:1869101-1869120 None:intergenic 45.0%
AAACTCCAGCTTGAAACCCT+TGG - chr3_2:1869102-1869121 None:intergenic 45.0%
CATGCAAGAAACAGAGGCAA+TGG - chr3_2:1869537-1869556 None:intergenic 45.0%
! CATTGCCTCTGTTTCTTGCA+TGG + chr3_2:1869535-1869554 Msa0390780:intron 45.0%
CCTATCCATGCAAGAAACAG+AGG - chr3_2:1869543-1869562 None:intergenic 45.0%
! CCTCTGTTTCTTGCATGGAT+AGG + chr3_2:1869540-1869559 Msa0390780:intron 45.0%
CCGAATGCCATCAAGACTAA+CGG - chr3_2:1869689-1869708 None:intergenic 45.0%
!! CCGTTAGTCTTGATGGCATT+CGG + chr3_2:1869686-1869705 Msa0390780:intron 45.0%
GTTCCACTTGATCACAAGCA+TGG - chr3_2:1869923-1869942 None:intergenic 45.0%
!! AAAAATGGTGGGGGCATTTG+CGG + chr3_2:1870108-1870127 Msa0390780:intron 45.0%
! CTGGTGATGATAGATGTCAC+CGG + chr3_2:1870134-1870153 Msa0390780:intron 45.0%
TGATGATAGATGTCACCGGA+AGG + chr3_2:1870138-1870157 Msa0390780:intron 45.0%
TCATGCTGTGTCATGGTTCA+CGG + chr3_2:1870255-1870274 Msa0390780:CDS 45.0%
! TGATGACGATGAAGAGGATG+AGG + chr3_2:1870360-1870379 Msa0390780:CDS 45.0%
GGATGAGGATGAAGATGATG+AGG + chr3_2:1870375-1870394 Msa0390780:CDS 45.0%
TGAGGATGAAGATGATGAGG+AGG + chr3_2:1870378-1870397 Msa0390780:CDS 45.0%
ATGATGAGGAGGAAGACGAA+GGG + chr3_2:1870389-1870408 Msa0390780:CDS 45.0%
GGAAGAACAAGAGCAAGGTA+GGG + chr3_2:1870416-1870435 Msa0390780:intron 45.0%
TTAACTGCAGAGTGGTAGCA+AGG + chr3_2:1870578-1870597 Msa0390780:intron 45.0%
GTTCTCTGCTTGGGATTCTT+GGG + chr3_2:1870838-1870857 Msa0390780:three_prime_UTR 45.0%
CGGCTGATGAATCATGCAAT+TGG + chr3_2:1871046-1871065 Msa0390780:three_prime_UTR 45.0%
AGAAAACTGGCAAAGGAGGA+GGG - chr3_2:1867202-1867221 None:intergenic 45.0%
AAGAAAACTGGCAAAGGAGG+AGG - chr3_2:1867203-1867222 None:intergenic 45.0%
GTAGGATAAGCTTCAGCTCT+TGG + chr3_2:1867672-1867691 Msa0390780:intron 45.0%
ATAAGCTTCAGCTCTTGGCT+GGG + chr3_2:1867677-1867696 Msa0390780:CDS 45.0%
TCAACACGTTGCCTGACATT+AGG - chr3_2:1867733-1867752 None:intergenic 45.0%
TAATGTCAGGCAACGTGTTG+AGG + chr3_2:1867732-1867751 Msa0390780:CDS 45.0%
! TTAGCCTGTTTTCGTGTGTG+TGG + chr3_2:1867809-1867828 Msa0390780:intron 45.0%
!! TAGAAGTGTCGGTGCTACAA+AGG - chr3_2:1867982-1868001 None:intergenic 45.0%
!! CATGTATCGGTGTCAGACAT+AGG - chr3_2:1868018-1868037 None:intergenic 45.0%
GCAGAGCGAACATGATGAAT+TGG + chr3_2:1868254-1868273 Msa0390780:intron 45.0%
GCACAGGCACTTATCATGAT+AGG - chr3_2:1868583-1868602 None:intergenic 45.0%
GAAGAAAGCAAAGCTGCTGA+AGG + chr3_2:1868777-1868796 Msa0390780:CDS 45.0%
!! AGAAAGGAGTCCCTAGCTTT+TGG + chr3_2:1868887-1868906 Msa0390780:CDS 45.0%
AACTCCAGCTTGAAACCCTT+GGG - chr3_2:1869101-1869120 None:intergenic 45.0%
AAACTCCAGCTTGAAACCCT+TGG - chr3_2:1869102-1869121 None:intergenic 45.0%
CATGCAAGAAACAGAGGCAA+TGG - chr3_2:1869537-1869556 None:intergenic 45.0%
! CATTGCCTCTGTTTCTTGCA+TGG + chr3_2:1869535-1869554 Msa0390780:intron 45.0%
CCTATCCATGCAAGAAACAG+AGG - chr3_2:1869543-1869562 None:intergenic 45.0%
! CCTCTGTTTCTTGCATGGAT+AGG + chr3_2:1869540-1869559 Msa0390780:intron 45.0%
CCGAATGCCATCAAGACTAA+CGG - chr3_2:1869689-1869708 None:intergenic 45.0%
!! CCGTTAGTCTTGATGGCATT+CGG + chr3_2:1869686-1869705 Msa0390780:intron 45.0%
GTTCCACTTGATCACAAGCA+TGG - chr3_2:1869923-1869942 None:intergenic 45.0%
!! AAAAATGGTGGGGGCATTTG+CGG + chr3_2:1870108-1870127 Msa0390780:intron 45.0%
! CTGGTGATGATAGATGTCAC+CGG + chr3_2:1870134-1870153 Msa0390780:intron 45.0%
TGATGATAGATGTCACCGGA+AGG + chr3_2:1870138-1870157 Msa0390780:intron 45.0%
TCATGCTGTGTCATGGTTCA+CGG + chr3_2:1870255-1870274 Msa0390780:CDS 45.0%
! TGATGACGATGAAGAGGATG+AGG + chr3_2:1870360-1870379 Msa0390780:CDS 45.0%
GGATGAGGATGAAGATGATG+AGG + chr3_2:1870375-1870394 Msa0390780:CDS 45.0%
TGAGGATGAAGATGATGAGG+AGG + chr3_2:1870378-1870397 Msa0390780:CDS 45.0%
ATGATGAGGAGGAAGACGAA+GGG + chr3_2:1870389-1870408 Msa0390780:CDS 45.0%
GGAAGAACAAGAGCAAGGTA+GGG + chr3_2:1870416-1870435 Msa0390780:intron 45.0%
TTAACTGCAGAGTGGTAGCA+AGG + chr3_2:1870578-1870597 Msa0390780:intron 45.0%
GTTCTCTGCTTGGGATTCTT+GGG + chr3_2:1870838-1870857 Msa0390780:three_prime_UTR 45.0%
CGGCTGATGAATCATGCAAT+TGG + chr3_2:1871046-1871065 Msa0390780:three_prime_UTR 45.0%
GAAATTGATGTTACCGGCGG+CGG - chr3_2:1867270-1867289 None:intergenic 50.0%
GATAAGCTTCAGCTCTTGGC+TGG + chr3_2:1867676-1867695 Msa0390780:CDS 50.0%
TAAGCTTCAGCTCTTGGCTG+GGG + chr3_2:1867678-1867697 Msa0390780:CDS 50.0%
! GCACCGACACTTCTAATCGA+AGG + chr3_2:1867987-1868006 Msa0390780:intron 50.0%
TTTAGAGGAGCGAGCTCAGT+TGG + chr3_2:1868287-1868306 Msa0390780:intron 50.0%
TTAGACACTACGGGCCTGTT+TGG - chr3_2:1868620-1868639 None:intergenic 50.0%
GATCACTGAACGTGATGAGG+AGG + chr3_2:1869031-1869050 Msa0390780:intron 50.0%
CAATCCCAAGGGTTTCAAGC+TGG + chr3_2:1869094-1869113 Msa0390780:CDS 50.0%
TCATCATCCTCGGGAATCTG+GGG - chr3_2:1869439-1869458 None:intergenic 50.0%
GTCATCATCCTCGGGAATCT+GGG - chr3_2:1869440-1869459 None:intergenic 50.0%
GCAAAACTGCTTATGGCGCA+TGG + chr3_2:1869856-1869875 Msa0390780:intron 50.0%
GTGCCATGCTTGTGATCAAG+TGG + chr3_2:1869917-1869936 Msa0390780:intron 50.0%
GTGAACCATGACACAGCATG+AGG - chr3_2:1870256-1870275 None:intergenic 50.0%
CATGCTGTGTCATGGTTCAC+GGG + chr3_2:1870256-1870275 Msa0390780:CDS 50.0%
GATGATGAGGAGGAAGACGA+AGG + chr3_2:1870388-1870407 Msa0390780:CDS 50.0%
GAAGGGGAAGAACAAGAGCA+AGG + chr3_2:1870411-1870430 Msa0390780:CDS 50.0%
GGGAAGAACAAGAGCAAGGT+AGG + chr3_2:1870415-1870434 Msa0390780:intron 50.0%
! ACTGCTGCTTGCAATCAGCA+GGG - chr3_2:1870635-1870654 None:intergenic 50.0%
! TACTGCTGCTTGCAATCAGC+AGG - chr3_2:1870636-1870655 None:intergenic 50.0%
CGTTCTCTGCTTGGGATTCT+TGG + chr3_2:1870837-1870856 Msa0390780:three_prime_UTR 50.0%
GAAATTGATGTTACCGGCGG+CGG - chr3_2:1867270-1867289 None:intergenic 50.0%
GATAAGCTTCAGCTCTTGGC+TGG + chr3_2:1867676-1867695 Msa0390780:CDS 50.0%
TAAGCTTCAGCTCTTGGCTG+GGG + chr3_2:1867678-1867697 Msa0390780:CDS 50.0%
! GCACCGACACTTCTAATCGA+AGG + chr3_2:1867987-1868006 Msa0390780:intron 50.0%
TTTAGAGGAGCGAGCTCAGT+TGG + chr3_2:1868287-1868306 Msa0390780:intron 50.0%
TTAGACACTACGGGCCTGTT+TGG - chr3_2:1868620-1868639 None:intergenic 50.0%
GATCACTGAACGTGATGAGG+AGG + chr3_2:1869031-1869050 Msa0390780:intron 50.0%
CAATCCCAAGGGTTTCAAGC+TGG + chr3_2:1869094-1869113 Msa0390780:CDS 50.0%
TCATCATCCTCGGGAATCTG+GGG - chr3_2:1869439-1869458 None:intergenic 50.0%
GTCATCATCCTCGGGAATCT+GGG - chr3_2:1869440-1869459 None:intergenic 50.0%
GCAAAACTGCTTATGGCGCA+TGG + chr3_2:1869856-1869875 Msa0390780:intron 50.0%
GTGCCATGCTTGTGATCAAG+TGG + chr3_2:1869917-1869936 Msa0390780:intron 50.0%
GTGAACCATGACACAGCATG+AGG - chr3_2:1870256-1870275 None:intergenic 50.0%
CATGCTGTGTCATGGTTCAC+GGG + chr3_2:1870256-1870275 Msa0390780:CDS 50.0%
GATGATGAGGAGGAAGACGA+AGG + chr3_2:1870388-1870407 Msa0390780:CDS 50.0%
GAAGGGGAAGAACAAGAGCA+AGG + chr3_2:1870411-1870430 Msa0390780:CDS 50.0%
GGGAAGAACAAGAGCAAGGT+AGG + chr3_2:1870415-1870434 Msa0390780:intron 50.0%
! ACTGCTGCTTGCAATCAGCA+GGG - chr3_2:1870635-1870654 None:intergenic 50.0%
! TACTGCTGCTTGCAATCAGC+AGG - chr3_2:1870636-1870655 None:intergenic 50.0%
CGTTCTCTGCTTGGGATTCT+TGG + chr3_2:1870837-1870856 Msa0390780:three_prime_UTR 50.0%
CTGGCAAAGGAGGAGGGAAA+TGG - chr3_2:1867196-1867215 None:intergenic 55.0%
!! GGGAAGATCGGCGGATTGAT+CGG - chr3_2:1867243-1867262 None:intergenic 55.0%
! CTCAGTGCTGAAGATCGTGC+TGG + chr3_2:1867440-1867459 Msa0390780:CDS 55.0%
TGGGGATCGTGTGGATGTCA+TGG + chr3_2:1867696-1867715 Msa0390780:CDS 55.0%
GCAGCCACACACACGAAAAC+AGG - chr3_2:1867816-1867835 None:intergenic 55.0%
ACGGAAATTGAGTGGCACCC+AGG + chr3_2:1869301-1869320 Msa0390780:CDS 55.0%
CGTCATCATCCTCGGGAATC+TGG - chr3_2:1869441-1869460 None:intergenic 55.0%
TGTGTCATGGTTCACGGGAG+AGG + chr3_2:1870261-1870280 Msa0390780:CDS 55.0%
TGAGGAGGAAGACGAAGGGA+AGG + chr3_2:1870393-1870412 Msa0390780:CDS 55.0%
GAGGAGGAAGACGAAGGGAA+GGG + chr3_2:1870394-1870413 Msa0390780:CDS 55.0%
AGGAGGAAGACGAAGGGAAG+GGG + chr3_2:1870395-1870414 Msa0390780:CDS 55.0%
AGTGGTAGCAAGGCCAAACC+TGG + chr3_2:1870588-1870607 Msa0390780:CDS 55.0%
CTGGCAAAGGAGGAGGGAAA+TGG - chr3_2:1867196-1867215 None:intergenic 55.0%
!! GGGAAGATCGGCGGATTGAT+CGG - chr3_2:1867243-1867262 None:intergenic 55.0%
! CTCAGTGCTGAAGATCGTGC+TGG + chr3_2:1867440-1867459 Msa0390780:CDS 55.0%
TGGGGATCGTGTGGATGTCA+TGG + chr3_2:1867696-1867715 Msa0390780:CDS 55.0%
GCAGCCACACACACGAAAAC+AGG - chr3_2:1867816-1867835 None:intergenic 55.0%
ACGGAAATTGAGTGGCACCC+AGG + chr3_2:1869301-1869320 Msa0390780:CDS 55.0%
CGTCATCATCCTCGGGAATC+TGG - chr3_2:1869441-1869460 None:intergenic 55.0%
TGTGTCATGGTTCACGGGAG+AGG + chr3_2:1870261-1870280 Msa0390780:CDS 55.0%
TGAGGAGGAAGACGAAGGGA+AGG + chr3_2:1870393-1870412 Msa0390780:CDS 55.0%
GAGGAGGAAGACGAAGGGAA+GGG + chr3_2:1870394-1870413 Msa0390780:CDS 55.0%
AGGAGGAAGACGAAGGGAAG+GGG + chr3_2:1870395-1870414 Msa0390780:CDS 55.0%
AGTGGTAGCAAGGCCAAACC+TGG + chr3_2:1870588-1870607 Msa0390780:CDS 55.0%
CATCCTCGGGAATCTGGGGA+GGG - chr3_2:1869435-1869454 None:intergenic 60.0%
TCATCCTCGGGAATCTGGGG+AGG - chr3_2:1869436-1869455 None:intergenic 60.0%
!! GTGGGGGCATTTGCGGAATC+TGG + chr3_2:1870115-1870134 Msa0390780:intron 60.0%
CATCCTCGGGAATCTGGGGA+GGG - chr3_2:1869435-1869454 None:intergenic 60.0%
TCATCCTCGGGAATCTGGGG+AGG - chr3_2:1869436-1869455 None:intergenic 60.0%
!! GTGGGGGCATTTGCGGAATC+TGG + chr3_2:1870115-1870134 Msa0390780:intron 60.0%
GCTCTTGGCTGGGGATCGTG+TGG + chr3_2:1867687-1867706 Msa0390780:CDS 65.0%
CAACCCTCCCCAGATTCCCG+AGG + chr3_2:1869429-1869448 Msa0390780:CDS 65.0%
GCTCTTGGCTGGGGATCGTG+TGG + chr3_2:1867687-1867706 Msa0390780:CDS 65.0%
CAACCCTCCCCAGATTCCCG+AGG + chr3_2:1869429-1869448 Msa0390780:CDS 65.0%
ATGTTACCGGCGGCGGCAGC+GGG - chr3_2:1867263-1867282 None:intergenic 70.0%
GATGTTACCGGCGGCGGCAG+CGG - chr3_2:1867264-1867283 None:intergenic 70.0%
ATGTTACCGGCGGCGGCAGC+GGG - chr3_2:1867263-1867282 None:intergenic 70.0%
GATGTTACCGGCGGCGGCAG+CGG - chr3_2:1867264-1867283 None:intergenic 70.0%
GGCGGCAGCGGGAAGATCGG+CGG - chr3_2:1867252-1867271 None:intergenic 75.0%
GGCGGCGGCAGCGGGAAGAT+CGG - chr3_2:1867255-1867274 None:intergenic 75.0%
GATCTTCCCGCTGCCGCCGC+CGG + chr3_2:1867254-1867273 Msa0390780:CDS 75.0%
GGCGGCAGCGGGAAGATCGG+CGG - chr3_2:1867252-1867271 None:intergenic 75.0%
GGCGGCGGCAGCGGGAAGAT+CGG - chr3_2:1867255-1867274 None:intergenic 75.0%
GATCTTCCCGCTGCCGCCGC+CGG + chr3_2:1867254-1867273 Msa0390780:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 1867181 1871207 1867181 ID=Msa0390780;Name=Msa0390780
chr3_2 mRNA 1867181 1871207 1867181 ID=Msa0390780-mRNA-1;Parent=Msa0390780;Name=Msa0390780-mRNA-1;_AED=0.09;_eAED=0.09;_QI=55|0.88|1|1|1|1|10|551|335
chr3_2 exon 1867181 1867275 1867181 ID=Msa0390780-mRNA-1:exon:546;Parent=Msa0390780-mRNA-1
chr3_2 exon 1867438 1867481 1867438 ID=Msa0390780-mRNA-1:exon:547;Parent=Msa0390780-mRNA-1
chr3_2 exon 1867676 1867771 1867676 ID=Msa0390780-mRNA-1:exon:548;Parent=Msa0390780-mRNA-1
chr3_2 exon 1868714 1868798 1868714 ID=Msa0390780-mRNA-1:exon:549;Parent=Msa0390780-mRNA-1
chr3_2 exon 1868887 1868948 1868887 ID=Msa0390780-mRNA-1:exon:550;Parent=Msa0390780-mRNA-1
chr3_2 exon 1869032 1869216 1869032 ID=Msa0390780-mRNA-1:exon:551;Parent=Msa0390780-mRNA-1
chr3_2 exon 1869300 1869477 1869300 ID=Msa0390780-mRNA-1:exon:552;Parent=Msa0390780-mRNA-1
chr3_2 exon 1869562 1869605 1869562 ID=Msa0390780-mRNA-1:exon:553;Parent=Msa0390780-mRNA-1
chr3_2 exon 1870228 1870432 1870228 ID=Msa0390780-mRNA-1:exon:554;Parent=Msa0390780-mRNA-1
chr3_2 exon 1870588 1871207 1870588 ID=Msa0390780-mRNA-1:exon:555;Parent=Msa0390780-mRNA-1
chr3_2 five_prime_UTR 1867181 1867235 1867181 ID=Msa0390780-mRNA-1:five_prime_utr;Parent=Msa0390780-mRNA-1
chr3_2 CDS 1867236 1867275 1867236 ID=Msa0390780-mRNA-1:cds;Parent=Msa0390780-mRNA-1
chr3_2 CDS 1867438 1867481 1867438 ID=Msa0390780-mRNA-1:cds;Parent=Msa0390780-mRNA-1
chr3_2 CDS 1867676 1867771 1867676 ID=Msa0390780-mRNA-1:cds;Parent=Msa0390780-mRNA-1
chr3_2 CDS 1868714 1868798 1868714 ID=Msa0390780-mRNA-1:cds;Parent=Msa0390780-mRNA-1
chr3_2 CDS 1868887 1868948 1868887 ID=Msa0390780-mRNA-1:cds;Parent=Msa0390780-mRNA-1
chr3_2 CDS 1869032 1869216 1869032 ID=Msa0390780-mRNA-1:cds;Parent=Msa0390780-mRNA-1
chr3_2 CDS 1869300 1869477 1869300 ID=Msa0390780-mRNA-1:cds;Parent=Msa0390780-mRNA-1
chr3_2 CDS 1869562 1869605 1869562 ID=Msa0390780-mRNA-1:cds;Parent=Msa0390780-mRNA-1
chr3_2 CDS 1870228 1870432 1870228 ID=Msa0390780-mRNA-1:cds;Parent=Msa0390780-mRNA-1
chr3_2 CDS 1870588 1870656 1870588 ID=Msa0390780-mRNA-1:cds;Parent=Msa0390780-mRNA-1
chr3_2 three_prime_UTR 1870657 1871207 1870657 ID=Msa0390780-mRNA-1:three_prime_utr;Parent=Msa0390780-mRNA-1
Gene Sequence

>Msa0390780

ATGTCCGATCAATCCGCCGATCTTCCCGCTGCCGCCGCCGCTCTCAGTGCTGAAGATCGTGCTGGTCTCGTCAATGCACTCAAAGATAAGCTTCAGCTCTTGGCTGGGGATCGTGTGGATGTCATGGAAACACTTTCGCCTAATGTCAGGCAACGTGTTGAGGTTCTCAAAGTTTTGCAGAGGTACGAGATTGTCAATGGTGTTATTGACGTTGAAGGAATTACAAACGAAGCAGGACAGGGAGAAGAAAGCAAAGCTGCTGAAGAGAAAGGAGTCCCTAGCTTTTGGTTAACTGCAATGAAGACTAATGAAATATTGGGTGAAGAGATCACTGAACGTGATGAGGAGGCTCTCAAGTATCTCAAAGATATCAAGTGGAGTAAACTTGACAATCCCAAGGGTTTCAAGCTGGAGTTTTATTTTGATTCTAATCCTTATTTCCAAAATTCCGTGCTAACAAAAACATATCACATGATTGAAGATGATGACCCTATATTAGAGAAATCAATAGGAACGGAAATTGAGTGGCACCCAGGAAAGTGCTTGACACAAAAGGTTATGAAGAAGAGGCCAAAGAAAGGATCAAAAAATGCCAAACCAATCATAAAAACAGAAAAATGTGATAGTTTCTTCAACATTTTCAACCCTCCCCAGATTCCCGAGGATGATGACGAAATTGATGACGATGTTGTTGAAGAGCTTCAAAATTTAATGGAGCATGATTATGATATTGGTTCTACAATCCGAGACAAAATTATTCCTCATGCTGTGTCATGGTTCACGGGAGAGGCTGTAGAGAGTGATTTTGACGATATAGAAGTAGATGAAGATGATGAAGACAGAGATGAAGATGAAGAGGATGATGATGATGACGATGAAGAGGATGAGGATGAAGATGATGAGGAGGAAGACGAAGGGAAGGGGAAGAACAAGAGCAAGAGTGGTAGCAAGGCCAAACCTGGTAAAGATCAGTCAACTGAGCGCCCTGCTGATTGCAAGCAGCAGTAG
Protein sequence

>Msa0390780

MSDQSADLPAAAAALSAEDRAGLVNALKDKLQLLAGDRVDVMETLSPNVRQRVEVLKVLQRYEIVNGVIDVEGITNEAGQGEESKAAEEKGVPSFWLTAMKTNEILGEEITERDEEALKYLKDIKWSKLDNPKGFKLEFYFDSNPYFQNSVLTKTYHMIEDDDPILEKSIGTEIEWHPGKCLTQKVMKKRPKKGSKNAKPIIKTEKCDSFFNIFNPPQIPEDDDEIDDDVVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEAVESDFDDIEVDEDDEDRDEDEEDDDDDDEEDEDEDDEEEDEGKGKNKSKSGSKAKPGKDQSTERPADCKQQ*