Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604010 | XP_013456231.1 | 97.579 | 413 | 10 | 0 | 1 | 413 | 1 | 413 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604010 | sp|Q8RWR1|JMJ30_ARATH | 70.118 | 425 | 109 | 5 | 4 | 411 | 5 | 428 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023040 | Msa0604010 | 0.802731 | 4.880482e-49 | -8.615850e-47 |
| Msa0026680 | Msa0604010 | 0.803151 | 3.996859e-49 | -8.615850e-47 |
| Msa0604010 | Msa0605630 | 0.800302 | 1.535925e-48 | -8.615850e-47 |
| Msa0604010 | Msa0646580 | 0.803933 | 2.752251e-49 | -8.615850e-47 |
| Msa0604010 | Msa0684780 | 0.885026 | 1.158929e-71 | -8.615850e-47 |
| Msa0604010 | Msa0688120 | 0.868104 | 8.363492e-66 | -8.615850e-47 |
| Msa0604010 | Msa0692240 | -0.804094 | 2.547443e-49 | -8.615850e-47 |
| Msa0604010 | Msa0708930 | 0.819458 | 1.149163e-52 | -8.615850e-47 |
| Msa0604010 | Msa0724140 | -0.841567 | 4.394529e-58 | -8.615850e-47 |
| Msa0604010 | Msa0758300 | -0.824588 | 7.443102e-54 | -8.615850e-47 |
| Msa0604010 | Msa0764680 | -0.851417 | 8.998664e-61 | -8.615850e-47 |
| Msa0604010 | Msa0799680 | -0.805528 | 1.278412e-49 | -8.615850e-47 |
| Msa0604010 | Msa0837930 | -0.832800 | 7.688930e-56 | -8.615850e-47 |
| Msa0604010 | Msa0844220 | -0.822979 | 1.772958e-53 | -8.615850e-47 |
| Msa0604010 | Msa0968610 | 0.806247 | 9.024677e-50 | -8.615850e-47 |
| Msa0604010 | Msa0982130 | 0.916134 | 2.565598e-85 | -8.615850e-47 |
| Msa0604010 | Msa1172610 | -0.803274 | 3.769837e-49 | -8.615850e-47 |
| Msa0604010 | Msa1212190 | 0.801124 | 1.044161e-48 | -8.615850e-47 |
| Msa0604010 | Msa1212270 | 0.804119 | 2.516832e-49 | -8.615850e-47 |
| Msa0604010 | Msa1259910 | 0.804039 | 2.616088e-49 | -8.615850e-47 |
| Msa0604010 | Msa1384360 | -0.811197 | 7.897175e-51 | -8.615850e-47 |
| Msa0375310 | Msa0604010 | 0.805930 | 1.052488e-49 | -8.615850e-47 |
| Msa0381500 | Msa0604010 | 0.811509 | 6.757936e-51 | -8.615850e-47 |
| Msa0390780 | Msa0604010 | 0.801586 | 8.398348e-49 | -8.615850e-47 |
| Msa0402210 | Msa0604010 | 0.844260 | 8.437875e-59 | -8.615850e-47 |
| Msa0421500 | Msa0604010 | 0.804491 | 2.105729e-49 | -8.615850e-47 |
| Msa0435980 | Msa0604010 | -0.811169 | 8.007406e-51 | -8.615850e-47 |
| Msa0444170 | Msa0604010 | -0.803091 | 4.113246e-49 | -8.615850e-47 |
| Msa0469560 | Msa0604010 | -0.801092 | 1.059786e-48 | -8.615850e-47 |
| Msa0350070 | Msa0604010 | -0.817475 | 3.235610e-52 | -8.615850e-47 |
| Msa0355140 | Msa0604010 | 0.836340 | 9.911070e-57 | -8.615850e-47 |
| Msa0483770 | Msa0604010 | 0.846531 | 2.049244e-59 | -8.615850e-47 |
| Msa0491730 | Msa0604010 | -0.813504 | 2.475990e-51 | -8.615850e-47 |
| Msa0513990 | Msa0604010 | 0.811231 | 7.763702e-51 | -8.615850e-47 |
| Msa0515270 | Msa0604010 | -0.812099 | 5.026606e-51 | -8.615850e-47 |
| Msa0519950 | Msa0604010 | 0.803286 | 3.747226e-49 | -8.615850e-47 |
| Msa0527690 | Msa0604010 | -0.811389 | 7.175483e-51 | -8.615850e-47 |
| Msa0550120 | Msa0604010 | 0.813515 | 2.461793e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604010 | MtrunA17_Chr4g0033081 | 97.579 | 413 | 10 | 0 | 1 | 413 | 1 | 413 | 0.0 | 833 |
| Msa0604010 | MtrunA17_Chr1g0185111 | 37.500 | 160 | 84 | 6 | 263 | 410 | 138 | 293 | 8.07e-22 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604010 | AT3G20810.1 | 71.981 | 414 | 109 | 4 | 4 | 411 | 5 | 417 | 0.0 | 608 |
| Msa0604010 | AT3G20810.2 | 70.118 | 425 | 109 | 5 | 4 | 411 | 5 | 428 | 0.0 | 600 |
| Msa0604010 | AT3G20810.3 | 71.320 | 394 | 107 | 3 | 4 | 392 | 5 | 397 | 0.0 | 580 |
| Msa0604010 | AT3G20810.5 | 68.807 | 327 | 96 | 3 | 4 | 325 | 5 | 330 | 1.52e-159 | 452 |
| Msa0604010 | AT3G20810.4 | 69.255 | 322 | 93 | 3 | 4 | 320 | 5 | 325 | 7.72e-158 | 449 |
| Msa0604010 | AT5G19840.1 | 29.562 | 274 | 141 | 10 | 176 | 404 | 15 | 281 | 3.02e-23 | 102 |
| Msa0604010 | AT5G19840.2 | 29.562 | 274 | 141 | 10 | 176 | 404 | 15 | 281 | 3.46e-23 | 102 |
| Msa0604010 | AT3G45880.2 | 25.168 | 298 | 151 | 11 | 166 | 404 | 16 | 300 | 7.07e-12 | 66.6 |
| Msa0604010 | AT3G45880.1 | 25.168 | 298 | 151 | 11 | 166 | 404 | 16 | 300 | 7.91e-12 | 66.6 |
| Msa0604010 | AT5G06550.1 | 25.097 | 259 | 157 | 11 | 159 | 401 | 182 | 419 | 3.17e-11 | 65.5 |
Find 120 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGATATGGGGATTATTA+TGG | 0.186608 | 4_2:-49145201 | Msa0604010:CDS |
| GGCGCTTAGGGCTTTGGATA+TGG | 0.208142 | 4_2:-49145213 | Msa0604010:CDS |
| TTTGAATACCTGATCAAATA+AGG | 0.226160 | 4_2:+49141690 | None:intergenic |
| CTACATTTCATTATTAATAA+TGG | 0.231399 | 4_2:-49140038 | Msa0604010:three_prime_UTR |
| CAGCCAGGTAATGATCTTTC+AGG | 0.278024 | 4_2:+49143128 | None:intergenic |
| AATGGGAGGTGTAAAGATTT+TGG | 0.296847 | 4_2:-49145101 | Msa0604010:CDS |
| AGGTTGGTTAAGGTTGATAA+TGG | 0.314847 | 4_2:-49145119 | Msa0604010:CDS |
| TCCTTGGCACTCGGTGTTGC+CGG | 0.319116 | 4_2:-49145309 | Msa0604010:CDS |
| CCAGTTTATCAGTTAGCTTT+TGG | 0.327040 | 4_2:-49140113 | Msa0604010:CDS |
| TAAAGAGGCGCTTAGGGCTT+TGG | 0.336994 | 4_2:-49145219 | Msa0604010:CDS |
| GGCGCGAATGTCGCCGGCGG+CGG | 0.341012 | 4_2:+49145376 | None:intergenic |
| TTGGATATGGGGATTATTAT+GGG | 0.343770 | 4_2:-49145200 | Msa0604010:CDS |
| CCAAAAGCTAACTGATAAAC+TGG | 0.357343 | 4_2:+49140113 | None:intergenic |
| AATTCCAAGTCTTGCACCTT+AGG | 0.363637 | 4_2:+49140213 | None:intergenic |
| GAGTTTGCTTAGGAAGGATT+TGG | 0.366501 | 4_2:-49145174 | Msa0604010:CDS |
| GATTACTTGCAAAGAGTTGC+TGG | 0.375148 | 4_2:-49143040 | Msa0604010:CDS |
| GTTTCACACTTCCAGGTTGT+TGG | 0.378528 | 4_2:-49140924 | Msa0604010:intron |
| GCGAAGTGTTGCTATGAAAA+TGG | 0.381872 | 4_2:-49145248 | Msa0604010:CDS |
| AGATCTCTCAATGCTTGGTT+TGG | 0.381952 | 4_2:-49141505 | Msa0604010:CDS |
| ATGCAGTCGCTGATGATAAC+TGG | 0.382618 | 4_2:+49143100 | None:intergenic |
| GCGCTTAGGGCTTTGGATAT+GGG | 0.383753 | 4_2:-49145212 | Msa0604010:CDS |
| GAGAGTTTAAAGAGGCGCTT+AGG | 0.392198 | 4_2:-49145226 | Msa0604010:CDS |
| TTTGAAGCAAGGGACTTAAC+AGG | 0.394352 | 4_2:+49143190 | None:intergenic |
| AGCAGCTGCACTCCGGTCCT+TGG | 0.396639 | 4_2:-49145325 | Msa0604010:CDS |
| TTCTGCTGTTGTGAAGGTTT+CGG | 0.399127 | 4_2:-49145150 | Msa0604010:CDS |
| TTTCACACTTCCAGGTTGTT+GGG | 0.399540 | 4_2:-49140923 | Msa0604010:intron |
| TGCTGGTGACCGCACTGTTC+CGG | 0.405682 | 4_2:-49143023 | Msa0604010:CDS |
| TCAGCATCCCTTATTTGATC+AGG | 0.417700 | 4_2:-49141698 | Msa0604010:intron |
| GGAGAAAGCGAGGTTGGTTA+AGG | 0.420028 | 4_2:-49145129 | Msa0604010:CDS |
| AAAACTATTTATGTGCAGAT+TGG | 0.423646 | 4_2:-49141804 | Msa0604010:CDS |
| CAAAGCATGGTTTCTGAGTA+GGG | 0.429895 | 4_2:+49140852 | None:intergenic |
| AATGCTTGGTTTGGTCCAGC+TGG | 0.430502 | 4_2:-49141496 | Msa0604010:CDS |
| TTCTGCGGCGCGAATGTCGC+CGG | 0.434979 | 4_2:+49145370 | None:intergenic |
| ACAAGAGTAATTACCTCAAC+CGG | 0.440109 | 4_2:+49143004 | None:intergenic |
| GGGTGGGAGTTTGCTTAGGA+AGG | 0.447670 | 4_2:-49145180 | Msa0604010:CDS |
| TTGAATACCTGATCAAATAA+GGG | 0.448968 | 4_2:+49141691 | None:intergenic |
| GGTTGGTTAAGGTTGATAAT+GGG | 0.450399 | 4_2:-49145118 | Msa0604010:CDS |
| TGAGATGGAGTGGAGGAGTG+TGG | 0.454775 | 4_2:+49145439 | None:intergenic |
| CGCTTAGGGCTTTGGATATG+GGG | 0.455785 | 4_2:-49145211 | Msa0604010:CDS |
| CTTTAGATCTTATCCGATCA+AGG | 0.458405 | 4_2:+49141752 | None:intergenic |
| CATAGTGCCACCACTTTGGC+GGG | 0.459007 | 4_2:+49140151 | None:intergenic |
| AATGTCGCCGGCGGCGGCGA+GGG | 0.462687 | 4_2:+49145382 | None:intergenic |
| GCAAAGCATGGTTTCTGAGT+AGG | 0.465229 | 4_2:+49140851 | None:intergenic |
| TGATAACTGGAGAGCCAGCC+AGG | 0.466614 | 4_2:+49143113 | None:intergenic |
| ATGTCCTCCCTCGCCGCCGC+CGG | 0.467944 | 4_2:-49145389 | Msa0604010:CDS |
| GAATGTCGCCGGCGGCGGCG+AGG | 0.469365 | 4_2:+49145381 | None:intergenic |
| GTTTCCTAAGGTGCAAGACT+TGG | 0.471641 | 4_2:-49140217 | Msa0604010:CDS |
| CTTGATCGGATAAGATCTAA+AGG | 0.478631 | 4_2:-49141751 | Msa0604010:CDS |
| GTCGCCGGCGGCGGCGAGGG+AGG | 0.481353 | 4_2:+49145385 | None:intergenic |
| AGCTAAGATCTCTCAATGCT+TGG | 0.481715 | 4_2:-49141510 | Msa0604010:CDS |
| GAAGAGATCTGCCTTGTCAC+TGG | 0.484449 | 4_2:-49143158 | Msa0604010:CDS |
| TGACCGCACTGTTCCGGTTG+AGG | 0.485106 | 4_2:-49143017 | Msa0604010:intron |
| GCACTCCGGTCCTTGGCACT+CGG | 0.485361 | 4_2:-49145318 | Msa0604010:CDS |
| TTATGGGTGGGAGTTTGCTT+AGG | 0.488417 | 4_2:-49145184 | Msa0604010:CDS |
| CGGCGGCGAGGGAGGACATA+CGG | 0.496322 | 4_2:+49145393 | None:intergenic |
| AATGGCAGATAAATGAGCTT+CGG | 0.499618 | 4_2:-49141576 | Msa0604010:intron |
| CGCACATAGTGCCACCACTT+TGG | 0.500138 | 4_2:+49140147 | None:intergenic |
| GGGACTTAACAGGCAAAAGT+TGG | 0.501194 | 4_2:+49143200 | None:intergenic |
| TCAGCGACTGCATGGCGCAC+TGG | 0.503078 | 4_2:-49143090 | Msa0604010:CDS |
| CACTACAAGCTTTGAAGCAA+GGG | 0.503171 | 4_2:+49143180 | None:intergenic |
| CTGAAAGATCATTACCTGGC+TGG | 0.509814 | 4_2:-49143127 | Msa0604010:CDS |
| CGCAGAAGCAGTTCGTGAGA+TGG | 0.510927 | 4_2:-49145354 | Msa0604010:CDS |
| CCACCAGTAAAACAATAGTC+AGG | 0.511588 | 4_2:+49141538 | None:intergenic |
| GAGATGGAGTGGAGGAGTGT+GGG | 0.514149 | 4_2:+49145440 | None:intergenic |
| AGTTCCTCAGACAAAGATGC+TGG | 0.515281 | 4_2:+49140879 | None:intergenic |
| CGTTCTCTGAGTTCCTTGAT+CGG | 0.519472 | 4_2:-49141765 | Msa0604010:CDS |
| AAGCAGTTCGTGAGATGGCG+TGG | 0.524892 | 4_2:-49145349 | Msa0604010:CDS |
| ACATAGTGCCACCACTTTGG+CGG | 0.531433 | 4_2:+49140150 | None:intergenic |
| AAAGTAATACGACATTAAGA+TGG | 0.532681 | 4_2:+49140066 | None:intergenic |
| CATGCTTTGCAATTCCAGCC+AGG | 0.532765 | 4_2:-49140838 | Msa0604010:intron |
| GAGAGAGTCGCTGATGGATG+AGG | 0.536053 | 4_2:+49145490 | None:intergenic |
| GGTTTCGGAGAAAGCGAGGT+TGG | 0.538332 | 4_2:-49145135 | Msa0604010:CDS |
| CAACACCGAGTGCCAAGGAC+CGG | 0.542861 | 4_2:+49145313 | None:intergenic |
| GTATGTTATGATGTGGATCA+TGG | 0.546162 | 4_2:+49141455 | None:intergenic |
| TTTGGATTCTGCTGTTGTGA+AGG | 0.548244 | 4_2:-49145156 | Msa0604010:CDS |
| GGATGCTGAGCAAGATATGT+AGG | 0.548812 | 4_2:+49141712 | None:intergenic |
| GGAGATTCTGCGTCGAGCGT+TGG | 0.551554 | 4_2:+49145461 | None:intergenic |
| AGATGAATTGAAGTTTCCTA+AGG | 0.560556 | 4_2:-49140229 | Msa0604010:CDS |
| TGCGGCGCGAATGTCGCCGG+CGG | 0.563097 | 4_2:+49145373 | None:intergenic |
| TTATCCAGCATCTTTGTCTG+AGG | 0.563839 | 4_2:-49140883 | Msa0604010:CDS |
| TGATGTGGATCATGGTGTAA+TGG | 0.564342 | 4_2:+49141463 | None:intergenic |
| GTGGCGTGACGCGTACTCGA+TGG | 0.564597 | 4_2:-49145285 | Msa0604010:CDS |
| ATATGGGGATTATTATGGGT+GGG | 0.564715 | 4_2:-49145196 | Msa0604010:CDS |
| CAGAAAACTAAATACCTGGC+TGG | 0.564939 | 4_2:+49140824 | None:intergenic |
| CATCTCACGAACTGCTTCTG+CGG | 0.572178 | 4_2:+49145355 | None:intergenic |
| AGAGTTTAAAGAGGCGCTTA+GGG | 0.572608 | 4_2:-49145225 | Msa0604010:CDS |
| CTTCCTGAAAGATCATTACC+TGG | 0.575421 | 4_2:-49143131 | Msa0604010:CDS |
| GCAAGATATGTAGGACCACC+AGG | 0.576296 | 4_2:+49141721 | None:intergenic |
| TCTTGAATTTGATGTTTCAA+AGG | 0.576493 | 4_2:-49145054 | Msa0604010:intron |
| CTCCACTCCATCTCATCCCA+CGG | 0.580867 | 4_2:-49145431 | Msa0604010:CDS |
| CTGGCTGGAATTGCAAAGCA+TGG | 0.582870 | 4_2:+49140839 | None:intergenic |
| ACCGGCAACACCGAGTGCCA+AGG | 0.583074 | 4_2:+49145308 | None:intergenic |
| GTAGCCTCCGTGGGATGAGA+TGG | 0.584469 | 4_2:+49145424 | None:intergenic |
| AGTTATCATCAGCGACTGCA+TGG | 0.585260 | 4_2:-49143098 | Msa0604010:CDS |
| TCACTACAAGCTTTGAAGCA+AGG | 0.585461 | 4_2:+49143179 | None:intergenic |
| CAGGAAGTTCTCCAGTGACA+AGG | 0.586848 | 4_2:+49143147 | None:intergenic |
| CAAAGTGGTGGCACTATGTG+CGG | 0.587103 | 4_2:-49140146 | Msa0604010:CDS |
| GATATGGGGATTATTATGGG+TGG | 0.587263 | 4_2:-49145197 | Msa0604010:CDS |
| ACATCATAACATACTAGCAC+AGG | 0.592715 | 4_2:-49141446 | Msa0604010:intron |
| GGCACTCGGTGTTGCCGGTG+TGG | 0.599102 | 4_2:-49145304 | Msa0604010:CDS |
| AATGGCGTTACAGTTCCAGC+TGG | 0.601305 | 4_2:+49141481 | None:intergenic |
| TGAAGGTTTCGGAGAAAGCG+AGG | 0.606598 | 4_2:-49145139 | Msa0604010:CDS |
| TGTTTCGAGAGAGTCGCTGA+TGG | 0.607399 | 4_2:+49145484 | None:intergenic |
| GACGTAGGCGTAGCCTCCGT+GGG | 0.608040 | 4_2:+49145415 | None:intergenic |
| TGAAAATGGAGAGTTTAAAG+AGG | 0.609357 | 4_2:-49145234 | Msa0604010:CDS |
| TGGTTAAGGTTGATAATGGG+AGG | 0.611770 | 4_2:-49145115 | Msa0604010:CDS |
| GCGTGGGAGCAGCTGCACTC+CGG | 0.612868 | 4_2:-49145332 | Msa0604010:CDS |
| TATATATCCCGCCAAAGTGG+TGG | 0.622734 | 4_2:-49140158 | Msa0604010:CDS |
| AGAGTCGCTGATGGATGAGG+TGG | 0.626527 | 4_2:+49145493 | None:intergenic |
| AGCAGTTCGTGAGATGGCGT+GGG | 0.629178 | 4_2:-49145348 | Msa0604010:CDS |
| GGACGTAGGCGTAGCCTCCG+TGG | 0.630457 | 4_2:+49145414 | None:intergenic |
| CGTGGGATGAGATGGAGTGG+AGG | 0.638713 | 4_2:+49145432 | None:intergenic |
| CTCCGTGGGATGAGATGGAG+TGG | 0.638980 | 4_2:+49145429 | None:intergenic |
| AAAGCATGGTTTCTGAGTAG+GGG | 0.643076 | 4_2:+49140853 | None:intergenic |
| TGTTATATATCCCGCCAAAG+TGG | 0.659158 | 4_2:-49140161 | Msa0604010:CDS |
| TGTGCTAGTATGTTATGATG+TGG | 0.675622 | 4_2:+49141448 | None:intergenic |
| CACTCCATCTCATCCCACGG+AGG | 0.717936 | 4_2:-49145428 | Msa0604010:CDS |
| GAGTACGCGTCACGCCACAC+CGG | 0.723133 | 4_2:+49145290 | None:intergenic |
| GAGGGAGGACATACGGACGT+AGG | 0.726924 | 4_2:+49145400 | None:intergenic |
| TTACCTCAACCGGAACAGTG+CGG | 0.784273 | 4_2:+49143014 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTATATATTAACTAAAAAA+AGG | + | chr4_2:49141128-49141147 | None:intergenic | 10.0% |
| !! | ATATATTAACTAAAAAAAGG+AGG | + | chr4_2:49141125-49141144 | None:intergenic | 15.0% |
| !! | AAAAGTTTAATTCATTTCAA+TGG | - | chr4_2:49141239-49141258 | Msa0604010:intron | 15.0% |
| !! | TTAATTATTAATACTACGAT+TGG | - | chr4_2:49141436-49141455 | Msa0604010:intron | 15.0% |
| !!! | TAATTTGAATGAATTGATTT+TGG | - | chr4_2:49141532-49141551 | Msa0604010:CDS | 15.0% |
| !! | NNNNNNNNNNCTAAAATGCA+TGG | - | chr4_2:49142653-49142672 | Msa0604010:intron | 15.0% |
| !!! | GAAATTTAAGTTCTTTTTTT+TGG | - | chr4_2:49142914-49142933 | Msa0604010:intron | 15.0% |
| !! | AATTTAGCTATTTAAAAAGA+GGG | + | chr4_2:49143168-49143187 | None:intergenic | 15.0% |
| !! | AAATTTAGCTATTTAAAAAG+AGG | + | chr4_2:49143169-49143188 | None:intergenic | 15.0% |
| !!! | AATAGCTAAATTTATTTCTA+CGG | - | chr4_2:49143176-49143195 | Msa0604010:CDS | 15.0% |
| !!! | AGTGAATAAATAAATTTGTT+TGG | - | chr4_2:49143370-49143389 | Msa0604010:intron | 15.0% |
| !!! | TAATTTTTTTTTTTCTGTGA+TGG | - | chr4_2:49143634-49143653 | Msa0604010:intron | 15.0% |
| !! | TATAACACAATTGTAATATA+GGG | + | chr4_2:49144372-49144391 | None:intergenic | 15.0% |
| !!! | TCATTTTATTGCTTTTAATT+AGG | - | chr4_2:49145179-49145198 | Msa0604010:CDS | 15.0% |
| !! | CTACATTTCATTATTAATAA+TGG | - | chr4_2:49145496-49145515 | Msa0604010:CDS | 15.0% |
| !! | ATGTGTAAAATAACTTTACA+CGG | - | chr4_2:49140625-49140644 | Msa0604010:intron | 20.0% |
| !!! | ATCAAATACTCTATTTCTAT+TGG | + | chr4_2:49140831-49140850 | None:intergenic | 20.0% |
| !!! | TTTTAAAGACTTGTAATCTA+AGG | - | chr4_2:49141051-49141070 | Msa0604010:intron | 20.0% |
| !! | TTTAAAGACTTGTAATCTAA+GGG | - | chr4_2:49141052-49141071 | Msa0604010:intron | 20.0% |
| !! | TATAAAATTCAAGCTATGAA+TGG | + | chr4_2:49141160-49141179 | None:intergenic | 20.0% |
| !!! | TTCAAATTACATTTTTGCTA+TGG | + | chr4_2:49141521-49141540 | None:intergenic | 20.0% |
| !! | CAAGTTAAAATTCATTTAAG+AGG | - | chr4_2:49141675-49141694 | Msa0604010:intron | 20.0% |
| !! | AAAAAAATTACATGCATGTT+TGG | + | chr4_2:49141832-49141851 | None:intergenic | 20.0% |
| !! | TCCTTATAACATTTAAACAA+TGG | - | chr4_2:49142102-49142121 | Msa0604010:intron | 20.0% |
| !! | TCCATTGTTTAAATGTTATA+AGG | + | chr4_2:49142106-49142125 | None:intergenic | 20.0% |
| !! | ATAACATTTAAACAATGGAA+TGG | - | chr4_2:49142107-49142126 | Msa0604010:intron | 20.0% |
| !!! | TATATTATTCCAGTTTTTCT+TGG | + | chr4_2:49142474-49142493 | None:intergenic | 20.0% |
| !!! | AGAGATAAAGTTTTCAAAAT+CGG | - | chr4_2:49142710-49142729 | Msa0604010:intron | 20.0% |
| !!! | AGTTTTGTAATTGTTAGTTA+AGG | + | chr4_2:49142832-49142851 | None:intergenic | 20.0% |
| !! | TTAATACACTTTGATTACAT+TGG | - | chr4_2:49143097-49143116 | Msa0604010:CDS | 20.0% |
| !! | ATTTAGCTATTTAAAAAGAG+GGG | + | chr4_2:49143167-49143186 | None:intergenic | 20.0% |
| !!! | ATAGCTAAATTTATTTCTAC+GGG | - | chr4_2:49143177-49143196 | Msa0604010:CDS | 20.0% |
| !! | GATGAATTTATGATTAATTC+TGG | + | chr4_2:49143206-49143225 | None:intergenic | 20.0% |
| !! | TACAAATTACAGAATAAAGA+CGG | + | chr4_2:49143570-49143589 | None:intergenic | 20.0% |
| !! | AGAAAAAAAAAAATTACACG+AGG | + | chr4_2:49143630-49143649 | None:intergenic | 20.0% |
| !! | TAATAGTATACTAGAAGAAA+AGG | - | chr4_2:49143676-49143695 | Msa0604010:intron | 20.0% |
| !! | AATAGTATACTAGAAGAAAA+GGG | - | chr4_2:49143677-49143696 | Msa0604010:intron | 20.0% |
| !! | ATATAACATGATTTAACTCT+GGG | + | chr4_2:49144222-49144241 | None:intergenic | 20.0% |
| !! | TATATAACATGATTTAACTC+TGG | + | chr4_2:49144223-49144242 | None:intergenic | 20.0% |
| !! | AGTAGTTATTAGTGAAATAA+AGG | - | chr4_2:49144284-49144303 | Msa0604010:intron | 20.0% |
| !! | CTATAACACAATTGTAATAT+AGG | + | chr4_2:49144373-49144392 | None:intergenic | 20.0% |
| !! | AATTAAGGAAATACTTCTAT+AGG | + | chr4_2:49144892-49144911 | None:intergenic | 20.0% |
| !! | GATATAAGATAGAAATGTTT+AGG | + | chr4_2:49145017-49145036 | None:intergenic | 20.0% |
| !! | AGTTTACCTATACAATATAT+GGG | - | chr4_2:49145062-49145081 | Msa0604010:CDS | 20.0% |
| !!! | TTATTGCTTTTTGATATTTC+TGG | - | chr4_2:49145222-49145241 | Msa0604010:CDS | 20.0% |
| ! | TCTTGAATTTGATGTTTCAA+AGG | - | chr4_2:49140480-49140499 | Msa0604010:intron | 25.0% |
| ! | AACACATGATTGAATTCAAA+GGG | + | chr4_2:49140524-49140543 | None:intergenic | 25.0% |
| ! | GTAGTATTCATTAATTGACA+TGG | - | chr4_2:49140590-49140609 | Msa0604010:intron | 25.0% |
| !!! | AATGATTGGTTTTCATTAGA+TGG | - | chr4_2:49140894-49140913 | Msa0604010:CDS | 25.0% |
| !! | GTAAAAATATTTTACACCGT+CGG | - | chr4_2:49140921-49140940 | Msa0604010:intron | 25.0% |
| ! | AAATTAATCCACGACTTTAT+AGG | + | chr4_2:49141094-49141113 | None:intergenic | 25.0% |
| !! | TATAAAGTCGTGGATTAATT+TGG | - | chr4_2:49141093-49141112 | Msa0604010:intron | 25.0% |
| ! | TTGTTACTATTATTGTTACG+AGG | - | chr4_2:49141291-49141310 | Msa0604010:intron | 25.0% |
| ! | CATAATAAAACTCCATTGTT+TGG | - | chr4_2:49141949-49141968 | Msa0604010:intron | 25.0% |
| ! | TTGGTAGAATTGATTGAAAT+AGG | - | chr4_2:49141968-49141987 | Msa0604010:intron | 25.0% |
| ! | TAGAATTGATTGAAATAGGA+GGG | - | chr4_2:49141972-49141991 | Msa0604010:intron | 25.0% |
| ! | TTAAACAATGGAATGGTAAT+TGG | - | chr4_2:49142114-49142133 | Msa0604010:intron | 25.0% |
| ! | AGACATGAGTAAAATGATTA+TGG | - | chr4_2:49142247-49142266 | Msa0604010:intron | 25.0% |
| ! | GACATGAGTAAAATGATTAT+GGG | - | chr4_2:49142248-49142267 | Msa0604010:intron | 25.0% |
| ! | ACATGAGTAAAATGATTATG+GGG | - | chr4_2:49142249-49142268 | Msa0604010:intron | 25.0% |
| ! | CTATAAAGTAAACGTTAGAA+GGG | + | chr4_2:49142295-49142314 | None:intergenic | 25.0% |
| !! | GAGATAAAGTTTTCAAAATC+GGG | - | chr4_2:49142711-49142730 | Msa0604010:intron | 25.0% |
| !! | TTTAGTTTCTTGATTTCACA+GGG | - | chr4_2:49142742-49142761 | Msa0604010:intron | 25.0% |
| ! | TAACAGCTAATGAACATTTA+CGG | + | chr4_2:49142876-49142895 | None:intergenic | 25.0% |
| ! | ACAACTTTGTTACTAGTATT+TGG | - | chr4_2:49142950-49142969 | Msa0604010:intron | 25.0% |
| ! | CAACTTTGTTACTAGTATTT+GGG | - | chr4_2:49142951-49142970 | Msa0604010:intron | 25.0% |
| ! | TAATCATAAATTCATCCACT+AGG | - | chr4_2:49143210-49143229 | Msa0604010:intron | 25.0% |
| ! | CCAATTAAATAATTTCCTAG+TGG | + | chr4_2:49143228-49143247 | None:intergenic | 25.0% |
| ! | CCACTAGGAAATTATTTAAT+TGG | - | chr4_2:49143225-49143244 | Msa0604010:intron | 25.0% |
| ! | CAATCAGAGAGATATTTAAA+GGG | + | chr4_2:49143288-49143307 | None:intergenic | 25.0% |
| !!! | TTTCTACATAGAGCATTTTT+AGG | + | chr4_2:49143317-49143336 | None:intergenic | 25.0% |
| ! | ACAAATTACAGAATAAAGAC+GGG | + | chr4_2:49143569-49143588 | None:intergenic | 25.0% |
| ! | ATAAATACAAACAACACTTG+AGG | + | chr4_2:49143598-49143617 | None:intergenic | 25.0% |
| ! | AAAACTATTTATGTGCAGAT+TGG | - | chr4_2:49143730-49143749 | Msa0604010:intron | 25.0% |
| ! | TTGAATACCTGATCAAATAA+GGG | + | chr4_2:49143846-49143865 | None:intergenic | 25.0% |
| ! | TTTGAATACCTGATCAAATA+AGG | + | chr4_2:49143847-49143866 | None:intergenic | 25.0% |
| !!! | TTATATACCCTTTGCTATTA+TGG | - | chr4_2:49144236-49144255 | Msa0604010:intron | 25.0% |
| ! | ATAAGAACCATAATAGCAAA+GGG | + | chr4_2:49144246-49144265 | None:intergenic | 25.0% |
| ! | AATAAGAACCATAATAGCAA+AGG | + | chr4_2:49144247-49144266 | None:intergenic | 25.0% |
| ! | CCATAGAATGATATATTTGA+CGG | - | chr4_2:49144574-49144593 | Msa0604010:intron | 25.0% |
| ! | CATATATTGTATAGGTAAAC+TGG | + | chr4_2:49145063-49145082 | None:intergenic | 25.0% |
| ! | CAGTTTACCTATACAATATA+TGG | - | chr4_2:49145061-49145080 | Msa0604010:CDS | 25.0% |
| ! | GTTTACCTATACAATATATG+GGG | - | chr4_2:49145063-49145082 | Msa0604010:CDS | 25.0% |
| !!! | TATGGAATAGTTTTAAATCC+AGG | - | chr4_2:49145086-49145105 | Msa0604010:CDS | 25.0% |
| !! | TTTTACCATTTTACAACAGA+CGG | + | chr4_2:49145115-49145134 | None:intergenic | 25.0% |
| ! | ATGAACACATATGAAATGAA+TGG | + | chr4_2:49145163-49145182 | None:intergenic | 25.0% |
| ! | AAAGTAATACGACATTAAGA+TGG | + | chr4_2:49145471-49145490 | None:intergenic | 25.0% |
| TGAAAATGGAGAGTTTAAAG+AGG | - | chr4_2:49140300-49140319 | Msa0604010:intron | 30.0% | |
| TTTGGATATGGGGATTATTA+TGG | - | chr4_2:49140333-49140352 | Msa0604010:intron | 30.0% | |
| TTGGATATGGGGATTATTAT+GGG | - | chr4_2:49140334-49140353 | Msa0604010:intron | 30.0% | |
| AATTTGATGTTTCAAAGGTG+AGG | - | chr4_2:49140485-49140504 | Msa0604010:intron | 30.0% | |
| ATTGAATTCAAAGGGAAAAG+AGG | + | chr4_2:49140516-49140535 | None:intergenic | 30.0% | |
| CAACACATGATTGAATTCAA+AGG | + | chr4_2:49140525-49140544 | None:intergenic | 30.0% | |
| !! | ACTCTATTTCTATTGGACAT+CGG | + | chr4_2:49140824-49140843 | None:intergenic | 30.0% |
| TGTTACAAAACATGCATACA+TGG | - | chr4_2:49140868-49140887 | Msa0604010:CDS | 30.0% | |
| ! | TATGTTATGGACTAAGTTGA+TGG | - | chr4_2:49140976-49140995 | Msa0604010:intron | 30.0% |
| TGTAATCTAAGGGACTTATT+TGG | - | chr4_2:49141062-49141081 | Msa0604010:intron | 30.0% | |
| GTAATCTAAGGGACTTATTT+GGG | - | chr4_2:49141063-49141082 | Msa0604010:intron | 30.0% | |
| ATACCACATCACAACAATAA+TGG | + | chr4_2:49141272-49141291 | None:intergenic | 30.0% | |
| TTATTGTTACGAGGAATGTT+AGG | - | chr4_2:49141300-49141319 | Msa0604010:intron | 30.0% | |
| CTCAATGAAAAAGCAAACAT+TGG | + | chr4_2:49141336-49141355 | None:intergenic | 30.0% | |
| TTCATTGAGTGAAATTTACG+TGG | - | chr4_2:49141347-49141366 | Msa0604010:intron | 30.0% | |
| !!! | GTTAAGTCCTATGTTGATTT+TGG | - | chr4_2:49141490-49141509 | Msa0604010:CDS | 30.0% |
| CTTACTTTCACATTTATGCA+TGG | + | chr4_2:49141594-49141613 | None:intergenic | 30.0% | |
| AAAATCATTTCTGTGCATGT+TGG | - | chr4_2:49141734-49141753 | Msa0604010:CDS | 30.0% | |
| !!! | TATGTTTTAACCACACAGTT+TGG | + | chr4_2:49141876-49141895 | None:intergenic | 30.0% |
| TCATCCTCAAATATGATACA+GGG | - | chr4_2:49141906-49141925 | Msa0604010:intron | 30.0% | |
| CAATCAATTCTACCAAACAA+TGG | + | chr4_2:49141964-49141983 | None:intergenic | 30.0% | |
| GTAGAATTGATTGAAATAGG+AGG | - | chr4_2:49141971-49141990 | Msa0604010:intron | 30.0% | |
| !!! | GGCTGTTTTTGGATATATAA+CGG | + | chr4_2:49142186-49142205 | None:intergenic | 30.0% |
| ATATATCCAAAAACAGCCTT+AGG | - | chr4_2:49142188-49142207 | Msa0604010:intron | 30.0% | |
| TATATCCAAAAACAGCCTTA+GGG | - | chr4_2:49142189-49142208 | Msa0604010:intron | 30.0% | |
| GCTATAAAGTAAACGTTAGA+AGG | + | chr4_2:49142296-49142315 | None:intergenic | 30.0% | |
| ! | CTTTATAGCTTTTACACTGT+AGG | - | chr4_2:49142307-49142326 | Msa0604010:intron | 30.0% |
| TTGTTCTTCAAAGTTCAAAG+AGG | + | chr4_2:49142684-49142703 | None:intergenic | 30.0% | |
| ! | GTTTAGTTTCTTGATTTCAC+AGG | - | chr4_2:49142741-49142760 | Msa0604010:intron | 30.0% |
| CTGTAACTTAACTCAATTGT+AGG | - | chr4_2:49142850-49142869 | Msa0604010:intron | 30.0% | |
| TAGTATTTGGGAAAATTCAC+CGG | - | chr4_2:49142963-49142982 | Msa0604010:intron | 30.0% | |
| TATGCCTGTAAAGAAAAGTA+GGG | - | chr4_2:49143011-49143030 | Msa0604010:intron | 30.0% | |
| GCAATCAGAGAGATATTTAA+AGG | + | chr4_2:49143289-49143308 | None:intergenic | 30.0% | |
| AAATATCTCTCTGATTGCAT+AGG | - | chr4_2:49143291-49143310 | Msa0604010:intron | 30.0% | |
| CATGTCATAATTACAACAGT+TGG | + | chr4_2:49143894-49143913 | None:intergenic | 30.0% | |
| TAATTATGACATGCAAGTTC+AGG | - | chr4_2:49143901-49143920 | Msa0604010:intron | 30.0% | |
| !! | ATTCCTGACTATTGTTTTAC+TGG | - | chr4_2:49143993-49144012 | Msa0604010:intron | 30.0% |
| CTAAATGTACACTTTATAGC+TGG | - | chr4_2:49144395-49144414 | Msa0604010:intron | 30.0% | |
| AAATCTGAACTTTGTATTGC+TGG | + | chr4_2:49144450-49144469 | None:intergenic | 30.0% | |
| CACAGATTTCTCTTAAGATA+AGG | + | chr4_2:49144480-49144499 | None:intergenic | 30.0% | |
| CCGTCAAATATATCATTCTA+TGG | + | chr4_2:49144577-49144596 | None:intergenic | 30.0% | |
| AGTTCAGAAAACTAAATACC+TGG | + | chr4_2:49144717-49144736 | None:intergenic | 30.0% | |
| TTCTATAGGCTATAGTTCTT+CGG | + | chr4_2:49144878-49144897 | None:intergenic | 30.0% | |
| AGAGAAGATACGTTGAATTA+AGG | + | chr4_2:49144907-49144926 | None:intergenic | 30.0% | |
| ! | ATGGTAAAATTTTATGCGCA+CGG | - | chr4_2:49145126-49145145 | Msa0604010:CDS | 30.0% |
| AGATGAATTGAAGTTTCCTA+AGG | - | chr4_2:49145305-49145324 | Msa0604010:CDS | 30.0% | |
| ! | ATTTGTAGACTGCATTTTAG+AGG | - | chr4_2:49145341-49145360 | Msa0604010:CDS | 30.0% |
| ATATGGGGATTATTATGGGT+GGG | - | chr4_2:49140338-49140357 | Msa0604010:intron | 35.0% | |
| !! | AGGTTGGTTAAGGTTGATAA+TGG | - | chr4_2:49140415-49140434 | Msa0604010:intron | 35.0% |
| !! | GGTTGGTTAAGGTTGATAAT+GGG | - | chr4_2:49140416-49140435 | Msa0604010:intron | 35.0% |
| !! | AATGGGAGGTGTAAAGATTT+TGG | - | chr4_2:49140433-49140452 | Msa0604010:intron | 35.0% |
| TTCGGTAACAGTAATTGATG+TGG | + | chr4_2:49140548-49140567 | None:intergenic | 35.0% | |
| GACAACTGTGCTTTAGTATT+CGG | + | chr4_2:49140566-49140585 | None:intergenic | 35.0% | |
| GAATACTAAAGCACAGTTGT+CGG | - | chr4_2:49140565-49140584 | Msa0604010:intron | 35.0% | |
| ! | ATTCGGTGGTTTACTTGTTA+AGG | + | chr4_2:49140672-49140691 | None:intergenic | 35.0% |
| TACACAGTCAGCTACAAATT+CGG | + | chr4_2:49140689-49140708 | None:intergenic | 35.0% | |
| AATTTGTAGCTGACTGTGTA+AGG | - | chr4_2:49140689-49140708 | Msa0604010:intron | 35.0% | |
| ! | TGTGTAAGGCTTTGTGAAAT+AGG | - | chr4_2:49140703-49140722 | Msa0604010:intron | 35.0% |
| TGCATACATGGCAAAATGAT+TGG | - | chr4_2:49140880-49140899 | Msa0604010:CDS | 35.0% | |
| TGAAAATGAATATGCACCGA+CGG | + | chr4_2:49140940-49140959 | None:intergenic | 35.0% | |
| AACTCGAGTAGAGTATGTTA+TGG | - | chr4_2:49140963-49140982 | Msa0604010:intron | 35.0% | |
| ! | AAAGTCGTGGATTAATTTGG+TGG | - | chr4_2:49141096-49141115 | Msa0604010:intron | 35.0% |
| TAGCCATTATTGTTGTGATG+TGG | - | chr4_2:49141266-49141285 | Msa0604010:intron | 35.0% | |
| TGGATCTCACAACTTTATGT+GGG | - | chr4_2:49141367-49141386 | Msa0604010:intron | 35.0% | |
| GGCATAACCAAAATCAACAT+AGG | + | chr4_2:49141500-49141519 | None:intergenic | 35.0% | |
| TACATGCATGTTTGGATTTG+CGG | + | chr4_2:49141824-49141843 | None:intergenic | 35.0% | |
| GTCATCCTCAAATATGATAC+AGG | - | chr4_2:49141905-49141924 | Msa0604010:intron | 35.0% | |
| TCAACCCTGTATCATATTTG+AGG | + | chr4_2:49141913-49141932 | None:intergenic | 35.0% | |
| !! | AAGCAGGGTATTGAATAGAA+TGG | + | chr4_2:49142031-49142050 | None:intergenic | 35.0% |
| TTCTTCTCTTCCAGTTTGAA+TGG | - | chr4_2:49142051-49142070 | Msa0604010:intron | 35.0% | |
| TTTCTCCATTCCATTCAAAC+TGG | + | chr4_2:49142064-49142083 | None:intergenic | 35.0% | |
| TGAGTAAAATGATTATGGGG+TGG | - | chr4_2:49142252-49142271 | Msa0604010:intron | 35.0% | |
| ! | TTATTCCAGTTTTTCTTGGC+TGG | + | chr4_2:49142470-49142489 | None:intergenic | 35.0% |
| ACAAGAGTAATTACCTCAAC+CGG | + | chr4_2:49142533-49142552 | None:intergenic | 35.0% | |
| TTCTTCAAAGTTCAAAGAGG+AGG | + | chr4_2:49142681-49142700 | None:intergenic | 35.0% | |
| AAAGGATCTGAGTATCAATG+GGG | + | chr4_2:49142795-49142814 | None:intergenic | 35.0% | |
| CAAAGGATCTGAGTATCAAT+GGG | + | chr4_2:49142796-49142815 | None:intergenic | 35.0% | |
| AAGGTGAGAGTTTAATCCAA+AGG | + | chr4_2:49142813-49142832 | None:intergenic | 35.0% | |
| AGTATTTGGGAAAATTCACC+GGG | - | chr4_2:49142964-49142983 | Msa0604010:intron | 35.0% | |
| GCAGTTTGAGCAAAAAGTAA+CGG | - | chr4_2:49142986-49143005 | Msa0604010:intron | 35.0% | |
| GTATGCCTGTAAAGAAAAGT+AGG | - | chr4_2:49143010-49143029 | Msa0604010:intron | 35.0% | |
| TGTAAAGAAAAGTAGGGTGA+GGG | - | chr4_2:49143017-49143036 | Msa0604010:intron | 35.0% | |
| AATGACAGGGTAAAAGTTCT+AGG | + | chr4_2:49143341-49143360 | None:intergenic | 35.0% | |
| ATTTGTTTGGTTGCAACAGT+TGG | - | chr4_2:49143383-49143402 | Msa0604010:intron | 35.0% | |
| TCAGGATTTGTCACAGAATA+GGG | + | chr4_2:49143430-49143449 | None:intergenic | 35.0% | |
| TGTTGAACTGAAACTGGAAA+TGG | - | chr4_2:49143474-49143493 | Msa0604010:intron | 35.0% | |
| ATTACAGAATAAAGACGGGA+GGG | + | chr4_2:49143565-49143584 | None:intergenic | 35.0% | |
| AATTACAGAATAAAGACGGG+AGG | + | chr4_2:49143566-49143585 | None:intergenic | 35.0% | |
| CTTTAGATCTTATCCGATCA+AGG | + | chr4_2:49143785-49143804 | None:intergenic | 35.0% | |
| CTTGATCGGATAAGATCTAA+AGG | - | chr4_2:49143783-49143802 | Msa0604010:intron | 35.0% | |
| ! | CGGTTTCTGACATTTTTGAA+TGG | - | chr4_2:49143940-49143959 | Msa0604010:intron | 35.0% |
| AATGGCAGATAAATGAGCTT+CGG | - | chr4_2:49143958-49143977 | Msa0604010:intron | 35.0% | |
| !! | ACTATTGTTTTACTGGTGGA+GGG | - | chr4_2:49144000-49144019 | Msa0604010:intron | 35.0% |
| GTATGTTATGATGTGGATCA+TGG | + | chr4_2:49144082-49144101 | None:intergenic | 35.0% | |
| TGTGCTAGTATGTTATGATG+TGG | + | chr4_2:49144089-49144108 | None:intergenic | 35.0% | |
| ACATCATAACATACTAGCAC+AGG | - | chr4_2:49144088-49144107 | Msa0604010:intron | 35.0% | |
| AAAAATGCTGCGTACATTAC+CGG | - | chr4_2:49144547-49144566 | Msa0604010:intron | 35.0% | |
| TATATCATTCTATGGTGCAC+CGG | + | chr4_2:49144569-49144588 | None:intergenic | 35.0% | |
| TTGTTGGGAAAAAATACGTC+AGG | - | chr4_2:49144626-49144645 | Msa0604010:intron | 35.0% | |
| GTTCTTCGGTCATTCAAAAT+AGG | + | chr4_2:49144807-49144826 | None:intergenic | 35.0% | |
| AGTGATATTCTTCCAAGCAA+AGG | + | chr4_2:49144833-49144852 | None:intergenic | 35.0% | |
| GTTCTTCGGTCATTCAAAAT+AGG | + | chr4_2:49144807-49144826 | None:intergenic | 35.0% | |
| CCATACCCCATATATTGTAT+AGG | + | chr4_2:49145071-49145090 | None:intergenic | 35.0% | |
| CCTATACAATATATGGGGTA+TGG | - | chr4_2:49145068-49145087 | Msa0604010:CDS | 35.0% | |
| !! | GGTCAGTTTCTTTTGTTTGA+AGG | - | chr4_2:49145266-49145285 | Msa0604010:CDS | 35.0% |
| CCAAAAGCTAACTGATAAAC+TGG | + | chr4_2:49145424-49145443 | None:intergenic | 35.0% | |
| !!! | CCAGTTTATCAGTTAGCTTT+TGG | - | chr4_2:49145421-49145440 | Msa0604010:CDS | 35.0% |
| !!! | GTTTATCAGTTAGCTTTTGG+TGG | - | chr4_2:49145424-49145443 | Msa0604010:CDS | 35.0% |
| !! | GCGAAGTGTTGCTATGAAAA+TGG | - | chr4_2:49140286-49140305 | Msa0604010:intron | 40.0% |
| !! | AGAGTTTAAAGAGGCGCTTA+GGG | - | chr4_2:49140309-49140328 | Msa0604010:intron | 40.0% |
| GATATGGGGATTATTATGGG+TGG | - | chr4_2:49140337-49140356 | Msa0604010:intron | 40.0% | |
| ! | GAGTTTGCTTAGGAAGGATT+TGG | - | chr4_2:49140360-49140379 | Msa0604010:intron | 40.0% |
| TTTGGATTCTGCTGTTGTGA+AGG | - | chr4_2:49140378-49140397 | Msa0604010:intron | 40.0% | |
| TTCTGCTGTTGTGAAGGTTT+CGG | - | chr4_2:49140384-49140403 | Msa0604010:intron | 40.0% | |
| !! | TGGTTAAGGTTGATAATGGG+AGG | - | chr4_2:49140419-49140438 | Msa0604010:intron | 40.0% |
| GAATTCAAAGGGAAAAGAGG+AGG | + | chr4_2:49140513-49140532 | None:intergenic | 40.0% | |
| !! | TGGACTAAGTTGATGGTAAG+TGG | - | chr4_2:49140983-49141002 | Msa0604010:intron | 40.0% |
| GTGGATCTCACAACTTTATG+TGG | - | chr4_2:49141366-49141385 | Msa0604010:intron | 40.0% | |
| GGATCTCACAACTTTATGTG+GGG | - | chr4_2:49141368-49141387 | Msa0604010:intron | 40.0% | |
| ! | CCAACACTCACTCTTTTGTT+GGG | + | chr4_2:49141409-49141428 | None:intergenic | 40.0% |
| ! | TCCAACACTCACTCTTTTGT+TGG | + | chr4_2:49141410-49141429 | None:intergenic | 40.0% |
| TTCTGTGCATGTTGGAATCA+CGG | - | chr4_2:49141742-49141761 | Msa0604010:CDS | 40.0% | |
| CGGTGAGTTTGAGAAAATCA+CGG | + | chr4_2:49141804-49141823 | None:intergenic | 40.0% | |
| ATGTCAAAGTCCAAACTGTG+TGG | - | chr4_2:49141863-49141882 | Msa0604010:intron | 40.0% | |
| !! | ACAGGGTTGATGAAATGACA+TGG | - | chr4_2:49141923-49141942 | Msa0604010:intron | 40.0% |
| TGAAATAGGAGGGAAAAGAG+TGG | - | chr4_2:49141982-49142001 | Msa0604010:intron | 40.0% | |
| GAAATAGGAGGGAAAAGAGT+GGG | - | chr4_2:49141983-49142002 | Msa0604010:intron | 40.0% | |
| ACTGGAAGAGAAGAAAAGCA+GGG | + | chr4_2:49142046-49142065 | None:intergenic | 40.0% | |
| AACTGGAAGAGAAGAAAAGC+AGG | + | chr4_2:49142047-49142066 | None:intergenic | 40.0% | |
| CTCTTCCAGTTTGAATGGAA+TGG | - | chr4_2:49142056-49142075 | Msa0604010:intron | 40.0% | |
| CGAAAGGGGATTTATTAGAG+TGG | + | chr4_2:49142149-49142168 | None:intergenic | 40.0% | |
| AGTGTGAAACTGAACGAAAG+GGG | + | chr4_2:49142163-49142182 | None:intergenic | 40.0% | |
| GAGTGTGAAACTGAACGAAA+GGG | + | chr4_2:49142164-49142183 | None:intergenic | 40.0% | |
| ! | TTTGAAGCAAGGGACTTAAC+AGG | + | chr4_2:49142347-49142366 | None:intergenic | 40.0% |
| !! | CACTACAAGCTTTGAAGCAA+GGG | + | chr4_2:49142357-49142376 | None:intergenic | 40.0% |
| !! | TCACTACAAGCTTTGAAGCA+AGG | + | chr4_2:49142358-49142377 | None:intergenic | 40.0% |
| CTTCCTGAAAGATCATTACC+TGG | - | chr4_2:49142403-49142422 | Msa0604010:intron | 40.0% | |
| GATTACTTGCAAAGAGTTGC+TGG | - | chr4_2:49142494-49142513 | Msa0604010:intron | 40.0% | |
| ACAGGGAAAAACAGATAGCT+GGG | - | chr4_2:49142759-49142778 | Msa0604010:intron | 40.0% | |
| CCAAAGGATCTGAGTATCAA+TGG | + | chr4_2:49142797-49142816 | None:intergenic | 40.0% | |
| CCATTGATACTCAGATCCTT+TGG | - | chr4_2:49142794-49142813 | Msa0604010:intron | 40.0% | |
| !! | TACTTTTTGCTCAAACTGCC+CGG | + | chr4_2:49142985-49143004 | None:intergenic | 40.0% |
| !! | CTCACCCTACTTTTCTTTAC+AGG | + | chr4_2:49143018-49143037 | None:intergenic | 40.0% |
| CTGTAAAGAAAAGTAGGGTG+AGG | - | chr4_2:49143016-49143035 | Msa0604010:intron | 40.0% | |
| CACTTGACAGATGAATGACA+GGG | + | chr4_2:49143354-49143373 | None:intergenic | 40.0% | |
| TCACTTGACAGATGAATGAC+AGG | + | chr4_2:49143355-49143374 | None:intergenic | 40.0% | |
| AGGATTTGTCACAGAATAGG+GGG | + | chr4_2:49143428-49143447 | None:intergenic | 40.0% | |
| CAGGATTTGTCACAGAATAG+GGG | + | chr4_2:49143429-49143448 | None:intergenic | 40.0% | |
| GTCAGGATTTGTCACAGAAT+AGG | + | chr4_2:49143431-49143450 | None:intergenic | 40.0% | |
| TGGCTAAAACAGAATCTGTC+AGG | + | chr4_2:49143448-49143467 | None:intergenic | 40.0% | |
| GTTTCAGTTCAACAACTTGG+TGG | + | chr4_2:49143468-49143487 | None:intergenic | 40.0% | |
| CCAGTTTCAGTTCAACAACT+TGG | + | chr4_2:49143471-49143490 | None:intergenic | 40.0% | |
| CCAAGTTGTTGAACTGAAAC+TGG | - | chr4_2:49143468-49143487 | Msa0604010:intron | 40.0% | |
| TTACAGAATAAAGACGGGAG+GGG | + | chr4_2:49143564-49143583 | None:intergenic | 40.0% | |
| AGAAGAAAAGGGTAAGTGTG+CGG | - | chr4_2:49143688-49143707 | Msa0604010:intron | 40.0% | |
| ! | AGATCTAAAGGCTTTTCTCC+TGG | - | chr4_2:49143795-49143814 | Msa0604010:intron | 40.0% |
| ! | TCAGCATCCCTTATTTGATC+AGG | - | chr4_2:49143836-49143855 | Msa0604010:intron | 40.0% |
| ! | CAGGACTTTTACTGCTCTTT+CGG | - | chr4_2:49143920-49143939 | Msa0604010:intron | 40.0% |
| CCACCAGTAAAACAATAGTC+AGG | + | chr4_2:49143999-49144018 | None:intergenic | 40.0% | |
| !! | CCTGACTATTGTTTTACTGG+TGG | - | chr4_2:49143996-49144015 | Msa0604010:intron | 40.0% |
| !! | GACTATTGTTTTACTGGTGG+AGG | - | chr4_2:49143999-49144018 | Msa0604010:intron | 40.0% |
| !! | CTATTGTTTTACTGGTGGAG+GGG | - | chr4_2:49144001-49144020 | Msa0604010:intron | 40.0% |
| AGCTAAGATCTCTCAATGCT+TGG | - | chr4_2:49144024-49144043 | Msa0604010:intron | 40.0% | |
| AGATCTCTCAATGCTTGGTT+TGG | - | chr4_2:49144029-49144048 | Msa0604010:intron | 40.0% | |
| TGATGTGGATCATGGTGTAA+TGG | + | chr4_2:49144074-49144093 | None:intergenic | 40.0% | |
| ACATGATTTAACTCTGGGCA+GGG | + | chr4_2:49144217-49144236 | None:intergenic | 40.0% | |
| AACATGATTTAACTCTGGGC+AGG | + | chr4_2:49144218-49144237 | None:intergenic | 40.0% | |
| GTAACAGTATTTGCCGAAGT+TGG | + | chr4_2:49144328-49144347 | None:intergenic | 40.0% | |
| ! | ATAGGGAAGAAGCATGAATC+TGG | + | chr4_2:49144355-49144374 | None:intergenic | 40.0% |
| !! | ATGTCTTGTTTCACACTTCC+AGG | - | chr4_2:49144603-49144622 | Msa0604010:intron | 40.0% |
| TTTCACACTTCCAGGTTGTT+GGG | - | chr4_2:49144611-49144630 | Msa0604010:intron | 40.0% | |
| !!! | CGTATTTTTTCCCAACAACC+TGG | + | chr4_2:49144624-49144643 | None:intergenic | 40.0% |
| TTATCCAGCATCTTTGTCTG+AGG | - | chr4_2:49144651-49144670 | Msa0604010:intron | 40.0% | |
| AAAGCATGGTTTCTGAGTAG+GGG | + | chr4_2:49144684-49144703 | None:intergenic | 40.0% | |
| CAAAGCATGGTTTCTGAGTA+GGG | + | chr4_2:49144685-49144704 | None:intergenic | 40.0% | |
| CAGAAAACTAAATACCTGGC+TGG | + | chr4_2:49144713-49144732 | None:intergenic | 40.0% | |
| AGCGATATTCTTCCAAGCAA+AGG | + | chr4_2:49144776-49144795 | None:intergenic | 40.0% | |
| TTTCTCTCCTCTGCATGTAT+AGG | - | chr4_2:49144971-49144990 | Msa0604010:intron | 40.0% | |
| TTACACACCTATACATGCAG+AGG | + | chr4_2:49144981-49145000 | None:intergenic | 40.0% | |
| ! | AAATCTGTCTTCGTGTTGAC+TGG | - | chr4_2:49145245-49145264 | Msa0604010:CDS | 40.0% |
| AATTCCAAGTCTTGCACCTT+AGG | + | chr4_2:49145324-49145343 | None:intergenic | 40.0% | |
| !! | GTAGACTGCATTTTAGAGGA+AGG | - | chr4_2:49145345-49145364 | Msa0604010:CDS | 40.0% |
| TGTTATATATCCCGCCAAAG+TGG | - | chr4_2:49145373-49145392 | Msa0604010:CDS | 40.0% | |
| !! | GAGAGTTTAAAGAGGCGCTT+AGG | - | chr4_2:49140308-49140327 | Msa0604010:intron | 45.0% |
| ! | TTATGGGTGGGAGTTTGCTT+AGG | - | chr4_2:49140350-49140369 | Msa0604010:intron | 45.0% |
| !! | GGGAGGTGTAAAGATTTTGG+TGG | - | chr4_2:49140436-49140455 | Msa0604010:intron | 45.0% |
| ACAGTCAGCTACAAATTCGG+TGG | + | chr4_2:49140686-49140705 | None:intergenic | 45.0% | |
| CCCAACAAAAGAGTGAGTGT+TGG | - | chr4_2:49141406-49141425 | Msa0604010:intron | 45.0% | |
| GGGAAAAGAGTGGGATATGA+TGG | - | chr4_2:49141992-49142011 | Msa0604010:intron | 45.0% | |
| GGAGTGTGAAACTGAACGAA+AGG | + | chr4_2:49142165-49142184 | None:intergenic | 45.0% | |
| GGGACTTAACAGGCAAAAGT+TGG | + | chr4_2:49142337-49142356 | None:intergenic | 45.0% | |
| CAGCCAGGTAATGATCTTTC+AGG | + | chr4_2:49142409-49142428 | None:intergenic | 45.0% | |
| CTGAAAGATCATTACCTGGC+TGG | - | chr4_2:49142407-49142426 | Msa0604010:intron | 45.0% | |
| ATGCAGTCGCTGATGATAAC+TGG | + | chr4_2:49142437-49142456 | None:intergenic | 45.0% | |
| AGTTATCATCAGCGACTGCA+TGG | - | chr4_2:49142436-49142455 | Msa0604010:intron | 45.0% | |
| CACAGGGAAAAACAGATAGC+TGG | - | chr4_2:49142758-49142777 | Msa0604010:intron | 45.0% | |
| TTTGTCACAGAATAGGGGGA+GGG | + | chr4_2:49143424-49143443 | None:intergenic | 45.0% | |
| ATTTGTCACAGAATAGGGGG+AGG | + | chr4_2:49143425-49143444 | None:intergenic | 45.0% | |
| CGTTCTCTGAGTTCCTTGAT+CGG | - | chr4_2:49143769-49143788 | Msa0604010:intron | 45.0% | |
| ! | TCTAAAGGCTTTTCTCCTGG+TGG | - | chr4_2:49143798-49143817 | Msa0604010:intron | 45.0% |
| GGATGCTGAGCAAGATATGT+AGG | + | chr4_2:49143825-49143844 | None:intergenic | 45.0% | |
| ! | AGTTGGACTCATGGGAGTAT+GGG | + | chr4_2:49144311-49144330 | None:intergenic | 45.0% |
| AAGTTGGACTCATGGGAGTA+TGG | + | chr4_2:49144312-49144331 | None:intergenic | 45.0% | |
| TACTCCCATGAGTCCAACTT+CGG | - | chr4_2:49144312-49144331 | Msa0604010:intron | 45.0% | |
| TTTGCCGAAGTTGGACTCAT+GGG | + | chr4_2:49144319-49144338 | None:intergenic | 45.0% | |
| ATTTGCCGAAGTTGGACTCA+TGG | + | chr4_2:49144320-49144339 | None:intergenic | 45.0% | |
| ! | GAAGAAGCATGAATCTGGCT+CGG | + | chr4_2:49144350-49144369 | None:intergenic | 45.0% |
| ACACTTTATAGCTGGCAACC+TGG | - | chr4_2:49144403-49144422 | Msa0604010:intron | 45.0% | |
| TACATCAACTATGCCATGCC+AGG | + | chr4_2:49144424-49144443 | None:intergenic | 45.0% | |
| GTTTCACACTTCCAGGTTGT+TGG | - | chr4_2:49144610-49144629 | Msa0604010:intron | 45.0% | |
| AGTTCCTCAGACAAAGATGC+TGG | + | chr4_2:49144658-49144677 | None:intergenic | 45.0% | |
| GCAAAGCATGGTTTCTGAGT+AGG | + | chr4_2:49144686-49144705 | None:intergenic | 45.0% | |
| CAAGCAAAGGCTTAAGCAGA+CGG | + | chr4_2:49144763-49144782 | None:intergenic | 45.0% | |
| ! | CCAAGCAAAGGCTTGTTCTT+CGG | + | chr4_2:49144821-49144840 | None:intergenic | 45.0% |
| ! | TTTTACAACAGACGGAGTCC+TGG | + | chr4_2:49145107-49145126 | None:intergenic | 45.0% |
| GGACTCCGTCTGTTGTAAAA+TGG | - | chr4_2:49145107-49145126 | Msa0604010:CDS | 45.0% | |
| GTTTCCTAAGGTGCAAGACT+TGG | - | chr4_2:49145317-49145336 | Msa0604010:CDS | 45.0% | |
| TATATATCCCGCCAAAGTGG+TGG | - | chr4_2:49145376-49145395 | Msa0604010:CDS | 45.0% | |
| !!! | AGTTAGCTTTTGGTGGAGTG+AGG | - | chr4_2:49145431-49145450 | Msa0604010:CDS | 45.0% |
| !!! | GTTAGCTTTTGGTGGAGTGA+GGG | - | chr4_2:49145432-49145451 | Msa0604010:CDS | 45.0% |
| TGTTTCGAGAGAGTCGCTGA+TGG | + | chr4_2:49140053-49140072 | None:intergenic | 50.0% | |
| CATCTCACGAACTGCTTCTG+CGG | + | chr4_2:49140182-49140201 | None:intergenic | 50.0% | |
| !! | TAAAGAGGCGCTTAGGGCTT+TGG | - | chr4_2:49140315-49140334 | Msa0604010:intron | 50.0% |
| !! | GCGCTTAGGGCTTTGGATAT+GGG | - | chr4_2:49140322-49140341 | Msa0604010:intron | 50.0% |
| !! | CGCTTAGGGCTTTGGATATG+GGG | - | chr4_2:49140323-49140342 | Msa0604010:intron | 50.0% |
| TGAAGGTTTCGGAGAAAGCG+AGG | - | chr4_2:49140395-49140414 | Msa0604010:intron | 50.0% | |
| ! | GGAGAAAGCGAGGTTGGTTA+AGG | - | chr4_2:49140405-49140424 | Msa0604010:intron | 50.0% |
| !! | GGGAGCATCCTATAAAGTCG+TGG | - | chr4_2:49141083-49141102 | Msa0604010:intron | 50.0% |
| TGTGCATGTTGGAATCACGG+TGG | - | chr4_2:49141745-49141764 | Msa0604010:CDS | 50.0% | |
| !! | GAGCACCCTAAGGCTGTTTT+TGG | + | chr4_2:49142197-49142216 | None:intergenic | 50.0% |
| !! | AAGCACAGAAGAGCACCCTA+AGG | + | chr4_2:49142207-49142226 | None:intergenic | 50.0% |
| GAAGAGATCTGCCTTGTCAC+TGG | - | chr4_2:49142376-49142395 | Msa0604010:intron | 50.0% | |
| CAGGAAGTTCTCCAGTGACA+AGG | + | chr4_2:49142390-49142409 | None:intergenic | 50.0% | |
| ACTGGCCAGCCAAGAAAAAC+TGG | - | chr4_2:49142462-49142481 | Msa0604010:intron | 50.0% | |
| TTACCTCAACCGGAACAGTG+CGG | + | chr4_2:49142523-49142542 | None:intergenic | 50.0% | |
| TTGTCACAGAATAGGGGGAG+GGG | + | chr4_2:49143423-49143442 | None:intergenic | 50.0% | |
| AAGTGTGCGGCATTCTTTGC+AGG | - | chr4_2:49143701-49143720 | Msa0604010:intron | 50.0% | |
| TGCGGCATTCTTTGCAGGTT+GGG | - | chr4_2:49143706-49143725 | Msa0604010:intron | 50.0% | |
| GCAAGATATGTAGGACCACC+AGG | + | chr4_2:49143816-49143835 | None:intergenic | 50.0% | |
| !! | AATGCTTGGTTTGGTCCAGC+TGG | - | chr4_2:49144038-49144057 | Msa0604010:intron | 50.0% |
| AATGGCGTTACAGTTCCAGC+TGG | + | chr4_2:49144056-49144075 | None:intergenic | 50.0% | |
| TTAAACACTCACCTCGCCCT+AGG | - | chr4_2:49144191-49144210 | Msa0604010:intron | 50.0% | |
| TTATAGCTGGCAACCTGGCA+TGG | - | chr4_2:49144408-49144427 | Msa0604010:intron | 50.0% | |
| CTGGCTGGAATTGCAAAGCA+TGG | + | chr4_2:49144698-49144717 | None:intergenic | 50.0% | |
| CATGCTTTGCAATTCCAGCC+AGG | - | chr4_2:49144696-49144715 | Msa0604010:intron | 50.0% | |
| CGTCTGCTTAAGCCTTTGCT+TGG | - | chr4_2:49144761-49144780 | Msa0604010:intron | 50.0% | |
| CCGAAGAACAAGCCTTTGCT+TGG | - | chr4_2:49144818-49144837 | Msa0604010:intron | 50.0% | |
| ACATAGTGCCACCACTTTGG+CGG | + | chr4_2:49145387-49145406 | None:intergenic | 50.0% | |
| CAAAGTGGTGGCACTATGTG+CGG | - | chr4_2:49145388-49145407 | Msa0604010:CDS | 50.0% | |
| ! | AGAGTCGCTGATGGATGAGG+TGG | + | chr4_2:49140044-49140063 | None:intergenic | 55.0% |
| ! | GAGAGAGTCGCTGATGGATG+AGG | + | chr4_2:49140047-49140066 | None:intergenic | 55.0% |
| ! | GAGATGGAGTGGAGGAGTGT+GGG | + | chr4_2:49140097-49140116 | None:intergenic | 55.0% |
| TGAGATGGAGTGGAGGAGTG+TGG | + | chr4_2:49140098-49140117 | None:intergenic | 55.0% | |
| CTCCACTCCATCTCATCCCA+CGG | - | chr4_2:49140103-49140122 | Msa0604010:CDS | 55.0% | |
| CGCAGAAGCAGTTCGTGAGA+TGG | - | chr4_2:49140180-49140199 | Msa0604010:CDS | 55.0% | |
| AAGCAGTTCGTGAGATGGCG+TGG | - | chr4_2:49140185-49140204 | Msa0604010:CDS | 55.0% | |
| AGCAGTTCGTGAGATGGCGT+GGG | - | chr4_2:49140186-49140205 | Msa0604010:CDS | 55.0% | |
| !! | GGCGCTTAGGGCTTTGGATA+TGG | - | chr4_2:49140321-49140340 | Msa0604010:intron | 55.0% |
| ! | GGGTGGGAGTTTGCTTAGGA+AGG | - | chr4_2:49140354-49140373 | Msa0604010:intron | 55.0% |
| GGTTTCGGAGAAAGCGAGGT+TGG | - | chr4_2:49140399-49140418 | Msa0604010:intron | 55.0% | |
| TGATAACTGGAGAGCCAGCC+AGG | + | chr4_2:49142424-49142443 | None:intergenic | 55.0% | |
| CAGAATAAAGACGGGAGGGG+AGG | + | chr4_2:49143561-49143580 | None:intergenic | 55.0% | |
| GTGCGGCATTCTTTGCAGGT+TGG | - | chr4_2:49143705-49143724 | Msa0604010:intron | 55.0% | |
| TTAACTCTGGGCAGGGCCTA+GGG | + | chr4_2:49144210-49144229 | None:intergenic | 55.0% | |
| TTTAACTCTGGGCAGGGCCT+AGG | + | chr4_2:49144211-49144230 | None:intergenic | 55.0% | |
| CATAGTGCCACCACTTTGGC+GGG | + | chr4_2:49145386-49145405 | None:intergenic | 55.0% | |
| CGCACATAGTGCCACCACTT+TGG | + | chr4_2:49145390-49145409 | None:intergenic | 55.0% | |
| GGAGATTCTGCGTCGAGCGT+TGG | + | chr4_2:49140076-49140095 | None:intergenic | 60.0% | |
| CGTGGGATGAGATGGAGTGG+AGG | + | chr4_2:49140105-49140124 | None:intergenic | 60.0% | |
| CTCCGTGGGATGAGATGGAG+TGG | + | chr4_2:49140108-49140127 | None:intergenic | 60.0% | |
| CACTCCATCTCATCCCACGG+AGG | - | chr4_2:49140106-49140125 | Msa0604010:CDS | 60.0% | |
| GTAGCCTCCGTGGGATGAGA+TGG | + | chr4_2:49140113-49140132 | None:intergenic | 60.0% | |
| GAGGGAGGACATACGGACGT+AGG | + | chr4_2:49140137-49140156 | None:intergenic | 60.0% | |
| CAACACCGAGTGCCAAGGAC+CGG | + | chr4_2:49140224-49140243 | None:intergenic | 60.0% | |
| !! | TCCTTGGCACTCGGTGTTGC+CGG | - | chr4_2:49140225-49140244 | Msa0604010:CDS | 60.0% |
| TGCTGGTGACCGCACTGTTC+CGG | - | chr4_2:49142511-49142530 | Msa0604010:intron | 60.0% | |
| TGACCGCACTGTTCCGGTTG+AGG | - | chr4_2:49142517-49142536 | Msa0604010:intron | 60.0% | |
| GACGTAGGCGTAGCCTCCGT+GGG | + | chr4_2:49140122-49140141 | None:intergenic | 65.0% | |
| TTCTGCGGCGCGAATGTCGC+CGG | + | chr4_2:49140167-49140186 | None:intergenic | 65.0% | |
| AGCAGCTGCACTCCGGTCCT+TGG | - | chr4_2:49140209-49140228 | Msa0604010:CDS | 65.0% | |
| GCACTCCGGTCCTTGGCACT+CGG | - | chr4_2:49140216-49140235 | Msa0604010:CDS | 65.0% | |
| ACCGGCAACACCGAGTGCCA+AGG | + | chr4_2:49140229-49140248 | None:intergenic | 65.0% | |
| GAGTACGCGTCACGCCACAC+CGG | + | chr4_2:49140247-49140266 | None:intergenic | 65.0% | |
| GTGGCGTGACGCGTACTCGA+TGG | - | chr4_2:49140249-49140268 | Msa0604010:CDS | 65.0% | |
| TCAGCGACTGCATGGCGCAC+TGG | - | chr4_2:49142444-49142463 | Msa0604010:intron | 65.0% | |
| GGACGTAGGCGTAGCCTCCG+TGG | + | chr4_2:49140123-49140142 | None:intergenic | 70.0% | |
| CGGCGGCGAGGGAGGACATA+CGG | + | chr4_2:49140144-49140163 | None:intergenic | 70.0% | |
| GCGTGGGAGCAGCTGCACTC+CGG | - | chr4_2:49140202-49140221 | Msa0604010:CDS | 70.0% | |
| !! | GGCACTCGGTGTTGCCGGTG+TGG | - | chr4_2:49140230-49140249 | Msa0604010:CDS | 70.0% |
| ATGTCCTCCCTCGCCGCCGC+CGG | - | chr4_2:49140145-49140164 | Msa0604010:CDS | 75.0% | |
| AATGTCGCCGGCGGCGGCGA+GGG | + | chr4_2:49140155-49140174 | None:intergenic | 75.0% | |
| TGCGGCGCGAATGTCGCCGG+CGG | + | chr4_2:49140164-49140183 | None:intergenic | 75.0% | |
| TCTGGGCAGGGCCTAGGGCG+AGG | + | chr4_2:49144205-49144224 | None:intergenic | 75.0% | |
| ! | GAATGTCGCCGGCGGCGGCG+AGG | + | chr4_2:49140156-49140175 | None:intergenic | 80.0% |
| ! | GGCGCGAATGTCGCCGGCGG+CGG | + | chr4_2:49140161-49140180 | None:intergenic | 80.0% |
| ! | GTCGCCGGCGGCGGCGAGGG+AGG | + | chr4_2:49140152-49140171 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 49140031 | 49145525 | 49140031 | ID=Msa0604010;Name=Msa0604010 |
| chr4_2 | mRNA | 49140031 | 49145525 | 49140031 | ID=Msa0604010-mRNA-1;Parent=Msa0604010;Name=Msa0604010-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.6|0.5|1|1|1|6|49|413 |
| chr4_2 | exon | 49140031 | 49140268 | 49140031 | ID=Msa0604010-mRNA-1:exon:11359;Parent=Msa0604010-mRNA-1 |
| chr4_2 | exon | 49140839 | 49140931 | 49140839 | ID=Msa0604010-mRNA-1:exon:11358;Parent=Msa0604010-mRNA-1 |
| chr4_2 | exon | 49141447 | 49141590 | 49141447 | ID=Msa0604010-mRNA-1:exon:11357;Parent=Msa0604010-mRNA-1 |
| chr4_2 | exon | 49141699 | 49141833 | 49141699 | ID=Msa0604010-mRNA-1:exon:11356;Parent=Msa0604010-mRNA-1 |
| chr4_2 | exon | 49143018 | 49143227 | 49143018 | ID=Msa0604010-mRNA-1:exon:11355;Parent=Msa0604010-mRNA-1 |
| chr4_2 | exon | 49145055 | 49145525 | 49145055 | ID=Msa0604010-mRNA-1:exon:11354;Parent=Msa0604010-mRNA-1 |
| chr4_2 | CDS | 49145055 | 49145525 | 49145055 | ID=Msa0604010-mRNA-1:cds;Parent=Msa0604010-mRNA-1 |
| chr4_2 | CDS | 49143018 | 49143227 | 49143018 | ID=Msa0604010-mRNA-1:cds;Parent=Msa0604010-mRNA-1 |
| chr4_2 | CDS | 49141699 | 49141833 | 49141699 | ID=Msa0604010-mRNA-1:cds;Parent=Msa0604010-mRNA-1 |
| chr4_2 | CDS | 49141447 | 49141590 | 49141447 | ID=Msa0604010-mRNA-1:cds;Parent=Msa0604010-mRNA-1 |
| chr4_2 | CDS | 49140839 | 49140931 | 49140839 | ID=Msa0604010-mRNA-1:cds;Parent=Msa0604010-mRNA-1 |
| chr4_2 | CDS | 49140080 | 49140268 | 49140080 | ID=Msa0604010-mRNA-1:cds;Parent=Msa0604010-mRNA-1 |
| chr4_2 | three_prime_UTR | 49140031 | 49140079 | 49140031 | ID=Msa0604010-mRNA-1:three_prime_utr;Parent=Msa0604010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
