AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0398400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0398400 MtrunA17_Chr3g0085831 97.041 169 5 0 1 169 1 169 1.58e-122 342
Msa0398400 MtrunA17_Chr7g0256851 49.524 105 49 3 1 104 1 102 1.47e-28 102
Msa0398400 MtrunA17_Chr5g0437861 32.749 171 73 4 1 169 4 134 1.41e-20 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0398400 AT2G41430.5 41.143 175 85 6 1 169 1 163 1.85e-28 103
Msa0398400 AT2G41430.4 41.143 175 85 6 1 169 1 163 1.85e-28 103
Msa0398400 AT2G41430.2 41.143 175 85 6 1 169 1 163 1.85e-28 103
Msa0398400 AT2G41430.1 41.143 175 85 6 1 169 1 163 1.85e-28 103
Msa0398400 AT2G41430.3 53.750 80 34 2 1 77 1 80 3.96e-24 91.7
Msa0398400 AT4G14270.1 34.659 176 72 7 2 169 3 143 9.40e-24 91.3
Msa0398400 AT4G14270.2 34.659 176 72 7 2 169 3 143 9.40e-24 91.3

Find 54 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAGTCTTGGAATGTTTA+TGG 0.128513 3_2:+19880696 Msa0398400:three_prime_UTR
AGTCTTTGAATTTATGTTTC+AGG 0.191028 3_2:+19880788 Msa0398400:three_prime_UTR
AGATAATGAGTTTGAGAAAT+TGG 0.215472 3_2:+19879566 Msa0398400:CDS
CGACATGGTTTCATAGCTAT+TGG 0.303499 3_2:+19879418 Msa0398400:CDS
GACTTTGGACCCCTTTCCTT+TGG 0.317537 3_2:-19880405 None:intergenic
GGGTGGATAAACTTATAAAA+TGG 0.317843 3_2:-19880952 None:intergenic
TTGCAGTTCAAGCAAGTTAT+CGG 0.334419 3_2:-19880536 None:intergenic
GTCCTGTTCAGTGTGGTAAT+TGG 0.336286 3_2:+19880814 Msa0398400:three_prime_UTR
GCTGGCTTCTCAAAGTGCTT+TGG 0.365521 3_2:-19880441 None:intergenic
GTTCTGATGGCATTGGTAAC+TGG 0.375492 3_2:+19879294 Msa0398400:exon
AAGTGCTTTGGAGATCCAAT+AGG 0.400879 3_2:-19880429 None:intergenic
TGAGTTGAAACAAAGCAAAA+TGG 0.401226 3_2:-19877787 None:intergenic
ATTCAATGCTTACCATGAAC+AGG 0.405358 3_2:-19879648 None:intergenic
CGAGGTTGGTGAATTCTTTG+AGG 0.416409 3_2:-19880489 None:intergenic
GGAGATCCAATAGGGGACTT+TGG 0.419975 3_2:-19880420 None:intergenic
GGTATGAAGAGAGGTGCATT+TGG 0.424438 3_2:-19879336 None:intergenic
TCAACAGGATCATCCATAAC+TGG 0.427432 3_2:-19879615 None:intergenic
GTTTGAAACGGCTTAAGTCT+TGG 0.429607 3_2:+19880685 Msa0398400:three_prime_UTR
AGGGGTCCAAAGTCCCCTAT+TGG 0.433062 3_2:+19880414 Msa0398400:CDS
CATGTAGTGTATTTAATGGT+AGG 0.436501 3_2:+19880650 Msa0398400:three_prime_UTR
AGTGCTTTGGAGATCCAATA+GGG 0.437450 3_2:-19880428 None:intergenic
AAGAATTCACCAACCTCGTT+AGG 0.440467 3_2:+19880494 Msa0398400:CDS
AGCTCAAGAGTGTCCAGTTA+TGG 0.459111 3_2:+19879602 Msa0398400:CDS
GATCTTGTCACCAAAGGAAA+GGG 0.460246 3_2:+19880395 Msa0398400:CDS
ATCCAATTACCACACTGAAC+AGG 0.468231 3_2:-19880816 None:intergenic
TGGACACTCTTGAGCTTCAT+CGG 0.502009 3_2:-19879595 None:intergenic
CTATTGGTTGAGCCAGCATA+AGG 0.514718 3_2:+19879434 Msa0398400:CDS
TTCTTTGAGGTGCACACTTG+AGG 0.519384 3_2:-19880476 None:intergenic
TAACTTGTGTATATAGAAGA+AGG 0.519471 3_2:+19880592 Msa0398400:three_prime_UTR
CAAAATCTTCCTCCTTATGC+TGG 0.523223 3_2:-19879446 None:intergenic
TGAGACTTTCAAGTTTGAAA+CGG 0.524402 3_2:+19880673 Msa0398400:three_prime_UTR
TTGAGGTTAACATATTGTGC+TGG 0.533520 3_2:-19880459 None:intergenic
ACCTGCTGCATTTCGTCAAG+TGG 0.534431 3_2:+19879356 Msa0398400:CDS
TTCACAAGCTCCCACCATTG+AGG 0.540449 3_2:-19879390 None:intergenic
AAAGTTTATCCTAACGAGGT+TGG 0.543754 3_2:-19880503 None:intergenic
TCCACTTGACGAAATGCAGC+AGG 0.554768 3_2:-19879357 None:intergenic
TTCTTAATCAGGTGTTAACA+AGG 0.557343 3_2:+19880353 Msa0398400:intron
AGATCTTGTCACCAAAGGAA+AGG 0.561565 3_2:+19880394 Msa0398400:CDS
CATCAAGATCTTGTCACCAA+AGG 0.566700 3_2:+19880389 Msa0398400:CDS
TGCTGCATTTCGTCAAGTGG+AGG 0.583030 3_2:+19879359 Msa0398400:CDS
ATTCTGCTGACAAGTTCTGA+TGG 0.587248 3_2:+19879281 Msa0398400:exon
AATGGTTAATGTAAGTTACA+TGG 0.588591 3_2:+19880757 Msa0398400:three_prime_UTR
TTAAACATGGAACCATGTGA+TGG 0.588720 3_2:+19880927 Msa0398400:three_prime_UTR
CTTCAAAGTTTATCCTAACG+AGG 0.589028 3_2:-19880507 None:intergenic
AGCTTGTGAAATCTTCGACA+TGG 0.599712 3_2:+19879403 Msa0398400:CDS
ATGACAACTTTATTTAAACA+TGG 0.605146 3_2:+19880914 Msa0398400:three_prime_UTR
CTGACAAGTTCTGATGGCAT+TGG 0.609871 3_2:+19879287 Msa0398400:exon
AGTTATGGATGATCCTGTTG+AGG 0.618736 3_2:+19879617 Msa0398400:CDS
TTGGTTGAGCCAGCATAAGG+AGG 0.633628 3_2:+19879437 Msa0398400:CDS
ATCTTGTCACCAAAGGAAAG+GGG 0.652126 3_2:+19880396 Msa0398400:CDS
TATAAAATGGAACCATCACA+TGG 0.659435 3_2:-19880939 None:intergenic
AATGCAGCAGGTATGAAGAG+AGG 0.675950 3_2:-19879345 None:intergenic
GTGCTTTGGAGATCCAATAG+GGG 0.692880 3_2:-19880427 None:intergenic
CAGGTGTGTCCTGTTCAGTG+TGG 0.697068 3_2:+19880807 Msa0398400:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAACATTTTTTTTTCAA+AGG - chr3_2:19878069-19878088 None:intergenic 10.0%
!!! AACTTTTATTAAGATATTTA+AGG - chr3_2:19878873-19878892 None:intergenic 10.0%
!! TTATAATGATCAAATATAAA+CGG - chr3_2:19879702-19879721 None:intergenic 10.0%
!! ATGTGTGTATTATAAAAATA+AGG + chr3_2:19878312-19878331 Msa0398400:intron 15.0%
!! TGTGTGTATTATAAAAATAA+GGG + chr3_2:19878313-19878332 Msa0398400:intron 15.0%
!!! ATATAAAAACAAGAGTTTTA+TGG + chr3_2:19878789-19878808 Msa0398400:intron 15.0%
!! TATCTTAATAAAAGTTTACT+AGG + chr3_2:19878877-19878896 Msa0398400:intron 15.0%
!!! AATACTTTTTCAAACTAAAT+AGG + chr3_2:19879920-19879939 Msa0398400:intron 15.0%
!! TAGTTTAAAAATCATACAAA+GGG + chr3_2:19880021-19880040 Msa0398400:intron 15.0%
!!! ATTATATTTACTCTAACTTT+TGG - chr3_2:19880208-19880227 None:intergenic 15.0%
!!! TTCATTTTGAAATAAATGAA+TGG + chr3_2:19880739-19880758 Msa0398400:three_prime_UTR 15.0%
!!! TTTTACATTTGAAAAGAAAA+TGG + chr3_2:19880860-19880879 Msa0398400:three_prime_UTR 15.0%
!!! TAATGTTTTTTTTTTCCACT+AGG + chr3_2:19878255-19878274 Msa0398400:intron 20.0%
!! AGAGTAAAAAGACAAATAAA+TGG - chr3_2:19878737-19878756 None:intergenic 20.0%
!!! TGTTATCTTTTCTAACAAAA+AGG - chr3_2:19878968-19878987 None:intergenic 20.0%
!! CTAGTTTAAAAATCATACAA+AGG + chr3_2:19880020-19880039 Msa0398400:intron 20.0%
!!! AGATCAATTTTATACATTGT+CGG - chr3_2:19880090-19880109 None:intergenic 20.0%
!!! AATTGATTTCTTTCTTAATC+AGG + chr3_2:19880342-19880361 Msa0398400:intron 20.0%
!!! TTTTCATGTAGTGTATTTAA+TGG + chr3_2:19880646-19880665 Msa0398400:three_prime_UTR 20.0%
!!! ATGACAACTTTATTTAAACA+TGG + chr3_2:19880914-19880933 Msa0398400:three_prime_UTR 20.0%
!! AAATACACTTTTGTAGCAAT+AGG + chr3_2:19877864-19877883 Msa0398400:five_prime_UTR 25.0%
! TTTCTCAAAAGATCAACAAT+GGG - chr3_2:19877967-19877986 None:intergenic 25.0%
!! TTTTCTCAAAAGATCAACAA+TGG - chr3_2:19877968-19877987 None:intergenic 25.0%
!! AATTTTTATAGCCCATTTGA+TGG + chr3_2:19878004-19878023 Msa0398400:intron 25.0%
!!! TTTTTTCAAAGGATCAACAA+TGG - chr3_2:19878058-19878077 None:intergenic 25.0%
!!! GCATCATAAAAAAGTATCAA+TGG - chr3_2:19878101-19878120 None:intergenic 25.0%
!! AGTTGAGTCAAATTTTTATG+TGG + chr3_2:19878179-19878198 Msa0398400:intron 25.0%
! TGCTAGTATATAGTAAATCT+TGG + chr3_2:19878345-19878364 Msa0398400:intron 25.0%
! AGTATATAGTAAATCTTGGA+TGG + chr3_2:19878349-19878368 Msa0398400:intron 25.0%
!!! AAGAAAAGATGAAGTGTTTT+TGG + chr3_2:19878476-19878495 Msa0398400:intron 25.0%
!! CTATCTCACAATCAAAATTT+TGG - chr3_2:19878693-19878712 None:intergenic 25.0%
! TACTCTTCACTAAAAATTGA+AGG + chr3_2:19878751-19878770 Msa0398400:intron 25.0%
! ATATGATATATGCCTTTGAA+TGG + chr3_2:19879029-19879048 Msa0398400:intron 25.0%
!! TATTTTACAACACCATTCAA+AGG - chr3_2:19879044-19879063 None:intergenic 25.0%
! ATACTTTATGAACACTTTGT+AGG + chr3_2:19879239-19879258 Msa0398400:intron 25.0%
! AGATAATGAGTTTGAGAAAT+TGG + chr3_2:19879566-19879585 Msa0398400:CDS 25.0%
!! TTTTAAACACAGTAGATTCT+AGG - chr3_2:19879875-19879894 None:intergenic 25.0%
!! GAATCGAACTCAAAATTTTA+GGG - chr3_2:19880292-19880311 None:intergenic 25.0%
!! TTACACATTTTGTGATTAGT+AGG - chr3_2:19880314-19880333 None:intergenic 25.0%
!! TAACTTGTGTATATAGAAGA+AGG + chr3_2:19880592-19880611 Msa0398400:three_prime_UTR 25.0%
!! TGTCTTTGTATTTTTCTTGT+TGG + chr3_2:19880623-19880642 Msa0398400:three_prime_UTR 25.0%
! AATGGTTAATGTAAGTTACA+TGG + chr3_2:19880757-19880776 Msa0398400:three_prime_UTR 25.0%
! AGTCTTTGAATTTATGTTTC+AGG + chr3_2:19880788-19880807 Msa0398400:three_prime_UTR 25.0%
! TGAGTTGAAACAAAGCAAAA+TGG - chr3_2:19877790-19877809 None:intergenic 30.0%
AGAAATAGCATCCATCAAAT+GGG - chr3_2:19878018-19878037 None:intergenic 30.0%
AAGAAATAGCATCCATCAAA+TGG - chr3_2:19878019-19878038 None:intergenic 30.0%
! GAGTCAAATTTTTATGTGGA+TGG + chr3_2:19878183-19878202 Msa0398400:intron 30.0%
!!! AAAAGATGAAGTGTTTTTGG+AGG + chr3_2:19878479-19878498 Msa0398400:intron 30.0%
!!! AAAGATGAAGTGTTTTTGGA+GGG + chr3_2:19878480-19878499 Msa0398400:intron 30.0%
! AAAACTTTTGATCCTAGTTG+TGG + chr3_2:19878518-19878537 Msa0398400:intron 30.0%
! AAACTTTTGATCCTAGTTGT+GGG + chr3_2:19878519-19878538 Msa0398400:intron 30.0%
GAATCAAGTGTTATCTTCTA+TGG + chr3_2:19878552-19878571 Msa0398400:intron 30.0%
TACCAATGAAGCAATTTCAT+TGG + chr3_2:19878991-19879010 Msa0398400:intron 30.0%
TACCAATGAAATTGCTTCAT+TGG - chr3_2:19878996-19879015 None:intergenic 30.0%
GTGTACAAATCTTTGAACAT+AGG + chr3_2:19879748-19879767 Msa0398400:intron 30.0%
TGATACAACGTTATATGTCT+TGG + chr3_2:19879973-19879992 Msa0398400:intron 30.0%
TTGGATTTAATCGATATGCA+CGG + chr3_2:19879992-19880011 Msa0398400:intron 30.0%
TATAATGTGTCATACCACAA+AGG + chr3_2:19880222-19880241 Msa0398400:intron 30.0%
! GGAATCGAACTCAAAATTTT+AGG - chr3_2:19880293-19880312 None:intergenic 30.0%
TTCTTAATCAGGTGTTAACA+AGG + chr3_2:19880353-19880372 Msa0398400:intron 30.0%
CATGTAGTGTATTTAATGGT+AGG + chr3_2:19880650-19880669 Msa0398400:three_prime_UTR 30.0%
!! TGAGACTTTCAAGTTTGAAA+CGG + chr3_2:19880673-19880692 Msa0398400:three_prime_UTR 30.0%
CTTAAGTCTTGGAATGTTTA+TGG + chr3_2:19880696-19880715 Msa0398400:three_prime_UTR 30.0%
TATAAAATGGAACCATCACA+TGG - chr3_2:19880942-19880961 None:intergenic 30.0%
TCCACTAGGAATTGATATGA+TGG + chr3_2:19878269-19878288 Msa0398400:intron 35.0%
CCACTAGGAATTGATATGAT+GGG + chr3_2:19878270-19878289 Msa0398400:intron 35.0%
!!! AAGATGAAGTGTTTTTGGAG+GGG + chr3_2:19878481-19878500 Msa0398400:intron 35.0%
CATATCATTATCCCACAACT+AGG - chr3_2:19878533-19878552 None:intergenic 35.0%
ACATTGCTTTAGCTGCTATT+TGG - chr3_2:19879135-19879154 None:intergenic 35.0%
! CTGTCAGAAACTTTTGATCT+TGG + chr3_2:19879519-19879538 Msa0398400:CDS 35.0%
ATTCAATGCTTACCATGAAC+AGG - chr3_2:19879651-19879670 None:intergenic 35.0%
!!! CCACTTTTTTGGATATCTCA+AGG - chr3_2:19879947-19879966 None:intergenic 35.0%
CCTTGAGATATCCAAAAAAG+TGG + chr3_2:19879944-19879963 Msa0398400:intron 35.0%
GATATCCAAAAAAGTGGATG+TGG + chr3_2:19879950-19879969 Msa0398400:intron 35.0%
!!! TATCACCACATCCACTTTTT+TGG - chr3_2:19879958-19879977 None:intergenic 35.0%
TTGAGGTTAACATATTGTGC+TGG - chr3_2:19880462-19880481 None:intergenic 35.0%
AAAGTTTATCCTAACGAGGT+TGG - chr3_2:19880506-19880525 None:intergenic 35.0%
CTTCAAAGTTTATCCTAACG+AGG - chr3_2:19880510-19880529 None:intergenic 35.0%
TTGCAGTTCAAGCAAGTTAT+CGG - chr3_2:19880539-19880558 None:intergenic 35.0%
TTAAACATGGAACCATGTGA+TGG + chr3_2:19880927-19880946 Msa0398400:three_prime_UTR 35.0%
CCCATCATATCAATTCCTAG+TGG - chr3_2:19878273-19878292 None:intergenic 40.0%
AAAACAACAGAGAGACAGCA+AGG - chr3_2:19878846-19878865 None:intergenic 40.0%
! CTGCAATTTTTCACGATCTG+CGG + chr3_2:19879182-19879201 Msa0398400:intron 40.0%
! ATTCTGCTGACAAGTTCTGA+TGG + chr3_2:19879281-19879300 Msa0398400:exon 40.0%
! TGGAGGATTTTTCACCTCAA+TGG + chr3_2:19879376-19879395 Msa0398400:CDS 40.0%
! AGGATTTTTCACCTCAATGG+TGG + chr3_2:19879379-19879398 Msa0398400:CDS 40.0%
! GGATTTTTCACCTCAATGGT+GGG + chr3_2:19879380-19879399 Msa0398400:CDS 40.0%
AGCTTGTGAAATCTTCGACA+TGG + chr3_2:19879403-19879422 Msa0398400:CDS 40.0%
CGACATGGTTTCATAGCTAT+TGG + chr3_2:19879418-19879437 Msa0398400:CDS 40.0%
CAAAATCTTCCTCCTTATGC+TGG - chr3_2:19879449-19879468 None:intergenic 40.0%
! GAGGAAGATTTTGTCGAAAG+TGG + chr3_2:19879456-19879475 Msa0398400:CDS 40.0%
! GAAGATTTTGTCGAAAGTGG+CGG + chr3_2:19879459-19879478 Msa0398400:CDS 40.0%
TCAACAGGATCATCCATAAC+TGG - chr3_2:19879618-19879637 None:intergenic 40.0%
AGTTATGGATGATCCTGTTG+AGG + chr3_2:19879617-19879636 Msa0398400:CDS 40.0%
!!! ACAGGCTTTTTTTCCTCAAC+AGG - chr3_2:19879633-19879652 None:intergenic 40.0%
GAGGAAAAAAAGCCTGTTCA+TGG + chr3_2:19879636-19879655 Msa0398400:CDS 40.0%
GATCTGTGTTTGTGTTTGGT+CGG + chr3_2:19880045-19880064 Msa0398400:intron 40.0%
! AAAGGTGTAGTGCAAGTAGT+TGG + chr3_2:19880240-19880259 Msa0398400:intron 40.0%
CATCAAGATCTTGTCACCAA+AGG + chr3_2:19880389-19880408 Msa0398400:CDS 40.0%
AGATCTTGTCACCAAAGGAA+AGG + chr3_2:19880394-19880413 Msa0398400:CDS 40.0%
GATCTTGTCACCAAAGGAAA+GGG + chr3_2:19880395-19880414 Msa0398400:CDS 40.0%
ATCTTGTCACCAAAGGAAAG+GGG + chr3_2:19880396-19880415 Msa0398400:CDS 40.0%
!! AGTGCTTTGGAGATCCAATA+GGG - chr3_2:19880431-19880450 None:intergenic 40.0%
!! AAGTGCTTTGGAGATCCAAT+AGG - chr3_2:19880432-19880451 None:intergenic 40.0%
AAGAATTCACCAACCTCGTT+AGG + chr3_2:19880494-19880513 Msa0398400:CDS 40.0%
! GTTTGAAACGGCTTAAGTCT+TGG + chr3_2:19880685-19880704 Msa0398400:three_prime_UTR 40.0%
ATCCAATTACCACACTGAAC+AGG - chr3_2:19880819-19880838 None:intergenic 40.0%
! CTGACAAGTTCTGATGGCAT+TGG + chr3_2:19879287-19879306 Msa0398400:exon 45.0%
!! GTTCTGATGGCATTGGTAAC+TGG + chr3_2:19879294-19879313 Msa0398400:exon 45.0%
! GGTATGAAGAGAGGTGCATT+TGG - chr3_2:19879339-19879358 None:intergenic 45.0%
AATGCAGCAGGTATGAAGAG+AGG - chr3_2:19879348-19879367 None:intergenic 45.0%
! CTATTGGTTGAGCCAGCATA+AGG + chr3_2:19879434-19879453 Msa0398400:CDS 45.0%
TGGACACTCTTGAGCTTCAT+CGG - chr3_2:19879598-19879617 None:intergenic 45.0%
!! AGCTCAAGAGTGTCCAGTTA+TGG + chr3_2:19879602-19879621 Msa0398400:CDS 45.0%
GGGTGATCTGTGTTTGTGTT+TGG + chr3_2:19880041-19880060 Msa0398400:intron 45.0%
CTACTTGCACTACACCTTTG+TGG - chr3_2:19880239-19880258 None:intergenic 45.0%
!! GTGCTTTGGAGATCCAATAG+GGG - chr3_2:19880430-19880449 None:intergenic 45.0%
!! TTCTTTGAGGTGCACACTTG+AGG - chr3_2:19880479-19880498 None:intergenic 45.0%
!! CGAGGTTGGTGAATTCTTTG+AGG - chr3_2:19880492-19880511 None:intergenic 45.0%
GTCCTGTTCAGTGTGGTAAT+TGG + chr3_2:19880814-19880833 Msa0398400:three_prime_UTR 45.0%
ACCTGCTGCATTTCGTCAAG+TGG + chr3_2:19879356-19879375 Msa0398400:CDS 50.0%
TCCACTTGACGAAATGCAGC+AGG - chr3_2:19879360-19879379 None:intergenic 50.0%
TGCTGCATTTCGTCAAGTGG+AGG + chr3_2:19879359-19879378 Msa0398400:CDS 50.0%
TTCACAAGCTCCCACCATTG+AGG - chr3_2:19879393-19879412 None:intergenic 50.0%
TTGGTTGAGCCAGCATAAGG+AGG + chr3_2:19879437-19879456 Msa0398400:CDS 50.0%
GACTTTGGACCCCTTTCCTT+TGG - chr3_2:19880408-19880427 None:intergenic 50.0%
GGAGATCCAATAGGGGACTT+TGG - chr3_2:19880423-19880442 None:intergenic 50.0%
! GCTGGCTTCTCAAAGTGCTT+TGG - chr3_2:19880444-19880463 None:intergenic 50.0%
AGGGGTCCAAAGTCCCCTAT+TGG + chr3_2:19880414-19880433 Msa0398400:CDS 55.0%
CAGGTGTGTCCTGTTCAGTG+TGG + chr3_2:19880807-19880826 Msa0398400:three_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 19877779 19880972 19877779 ID=Msa0398400;Name=Msa0398400
chr3_2 mRNA 19877779 19880972 19877779 ID=Msa0398400-mRNA-1;Parent=Msa0398400;Name=Msa0398400-mRNA-1;_AED=0.00;_eAED=0.00;_QI=146|1|1|1|0.5|0.33|3|457|169
chr3_2 exon 19877779 19877885 19877779 ID=Msa0398400-mRNA-1:exon:4283;Parent=Msa0398400-mRNA-1
chr3_2 exon 19879261 19879657 19879261 ID=Msa0398400-mRNA-1:exon:4284;Parent=Msa0398400-mRNA-1
chr3_2 exon 19880364 19880972 19880364 ID=Msa0398400-mRNA-1:exon:4285;Parent=Msa0398400-mRNA-1
chr3_2 five_prime_UTR 19877779 19877885 19877779 ID=Msa0398400-mRNA-1:five_prime_utr;Parent=Msa0398400-mRNA-1
chr3_2 five_prime_UTR 19879261 19879299 19879261 ID=Msa0398400-mRNA-1:five_prime_utr;Parent=Msa0398400-mRNA-1
chr3_2 CDS 19879300 19879657 19879300 ID=Msa0398400-mRNA-1:cds;Parent=Msa0398400-mRNA-1
chr3_2 CDS 19880364 19880515 19880364 ID=Msa0398400-mRNA-1:cds;Parent=Msa0398400-mRNA-1
chr3_2 three_prime_UTR 19880516 19880972 19880516 ID=Msa0398400-mRNA-1:three_prime_utr;Parent=Msa0398400-mRNA-1
Gene Sequence

>Msa0398400

ATGGCATTGGTAACTGGAAGAAGTTCAGCTCTGAATCCAAATGCACCTCTCTTCATACCTGCTGCATTTCGTCAAGTGGAGGATTTTTCACCTCAATGGTGGGAGCTTGTGAAATCTTCGACATGGTTTCATAGCTATTGGTTGAGCCAGCATAAGGAGGAAGATTTTGTCGAAAGTGGCGGAAATGAAGCTACAAATGATGATGATATAGAACATATGCTGTCAGAAACTTTTGATCTTGGCATTGAAGAAGATTTCAATTTTCTAGATAATGAGTTTGAGAAATTGGTGATGTCCGATGAAGCTCAAGAGTGTCCAGTTATGGATGATCCTGTTGAGGAAAAAAAGCCTGTTCATGGTGTTAACAAGGATGCTGCAGCTCTCATCAAGATCTTGTCACCAAAGGAAAGGGGTCCAAAGTCCCCTATTGGATCTCCAAAGCACTTTGAGAAGCCAGCACAATATGTTAACCTCAAGTGTGCACCTCAAAGAATTCACCAACCTCGTTAG
Protein sequence

>Msa0398400

MALVTGRSSALNPNAPLFIPAAFRQVEDFSPQWWELVKSSTWFHSYWLSQHKEEDFVESGGNEATNDDDIEHMLSETFDLGIEEDFNFLDNEFEKLVMSDEAQECPVMDDPVEEKKPVHGVNKDAAALIKILSPKERGPKSPIGSPKHFEKPAQYVNLKCAPQRIHQPR*