Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401230 | XP_027353672.1 | 84.507 | 142 | 13 | 1 | 225 | 357 | 244 | 385 | 1.28e-71 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401230 | sp|Q8L6Y1|UBP14_ARATH | 73.381 | 139 | 28 | 1 | 225 | 354 | 239 | 377 | 1.53e-62 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401230 | A0A151QXE0 | 62.136 | 206 | 50 | 4 | 176 | 356 | 182 | 384 | 1.22e-70 | 246 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0401230 | Msa0889190 | 0.871676 | 5.701171e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401230 | MtrunA17_Chr2g0318671 | 58.621 | 203 | 56 | 4 | 176 | 353 | 177 | 376 | 1.65e-67 | 227 |
| Msa0401230 | MtrunA17_Chr5g0410931 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr5g0410951 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr8g0383851 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr8g0383781 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr8g0390361 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr2g0295191 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr7g0237661 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr4g0033041 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr7g0218971 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr4g0046301 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr8g0364801 | 91.089 | 101 | 9 | 0 | 1 | 101 | 1 | 101 | 1.75e-56 | 181 |
| Msa0401230 | MtrunA17_Chr1g0211411 | 86.735 | 98 | 13 | 0 | 111 | 208 | 82 | 179 | 6.35e-56 | 183 |
| Msa0401230 | MtrunA17_Chr4g0054161 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 2.78e-53 | 172 |
| Msa0401230 | MtrunA17_Chr8g0363741 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 2.78e-53 | 172 |
| Msa0401230 | MtrunA17_Chr1g0156021 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 2.78e-53 | 172 |
| Msa0401230 | MtrunA17_Chr4g0054151 | 87.129 | 101 | 13 | 0 | 1 | 101 | 4 | 104 | 2.84e-53 | 173 |
| Msa0401230 | MtrunA17_Chr8g0388121 | 86.139 | 101 | 14 | 0 | 1 | 101 | 1 | 101 | 1.04e-52 | 171 |
| Msa0401230 | MtrunA17_Chr2g0319141 | 85.263 | 95 | 14 | 0 | 1 | 95 | 1 | 95 | 5.34e-49 | 162 |
| Msa0401230 | MtrunA17_Chr2g0319151 | 85.263 | 95 | 14 | 0 | 1 | 95 | 1 | 95 | 5.34e-49 | 162 |
| Msa0401230 | MtrunA17_Chr2g0319131 | 73.874 | 111 | 19 | 1 | 1 | 101 | 1 | 111 | 1.41e-44 | 150 |
| Msa0401230 | MtrunA17_Chr2g0319121 | 72.549 | 102 | 26 | 2 | 1 | 101 | 1 | 101 | 6.82e-38 | 133 |
| Msa0401230 | MtrunA17_Chr7g0218961 | 87.324 | 71 | 9 | 0 | 25 | 95 | 2 | 72 | 1.73e-36 | 128 |
| Msa0401230 | MtrunA17_Chr7g0240791 | 95.455 | 66 | 3 | 0 | 1 | 66 | 1 | 66 | 4.55e-34 | 123 |
| Msa0401230 | MtrunA17_Chr5g0407311 | 65.263 | 95 | 30 | 2 | 1 | 95 | 1 | 92 | 5.53e-29 | 108 |
| Msa0401230 | MtrunA17_Chr7g0222991 | 61.702 | 94 | 35 | 1 | 1 | 94 | 10 | 102 | 1.43e-26 | 103 |
| Msa0401230 | MtrunA17_Chr7g0223001 | 50.000 | 108 | 45 | 5 | 1 | 102 | 10 | 114 | 1.41e-18 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0401230 | AT3G20630.1 | 73.381 | 139 | 28 | 1 | 225 | 354 | 239 | 377 | 1.56e-63 | 217 |
| Msa0401230 | AT1G09200.1 | 90.099 | 101 | 10 | 0 | 1 | 101 | 1 | 101 | 5.85e-56 | 180 |
| Msa0401230 | AT5G65360.1 | 90.099 | 101 | 10 | 0 | 1 | 101 | 1 | 101 | 5.85e-56 | 180 |
| Msa0401230 | AT5G10390.1 | 90.099 | 101 | 10 | 0 | 1 | 101 | 1 | 101 | 5.85e-56 | 180 |
| Msa0401230 | AT5G10400.1 | 90.099 | 101 | 10 | 0 | 1 | 101 | 1 | 101 | 5.85e-56 | 180 |
| Msa0401230 | AT3G27360.1 | 90.099 | 101 | 10 | 0 | 1 | 101 | 1 | 101 | 5.85e-56 | 180 |
| Msa0401230 | AT4G40030.3 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 3.84e-53 | 172 |
| Msa0401230 | AT4G40030.1 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 3.84e-53 | 172 |
| Msa0401230 | AT4G40030.4 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 3.84e-53 | 172 |
| Msa0401230 | AT5G10980.1 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 3.84e-53 | 172 |
| Msa0401230 | AT4G40040.2 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 3.84e-53 | 172 |
| Msa0401230 | AT4G40040.3 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 3.84e-53 | 172 |
| Msa0401230 | AT4G40040.1 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 3.84e-53 | 172 |
| Msa0401230 | AT4G40030.2 | 87.129 | 101 | 13 | 0 | 1 | 101 | 29 | 129 | 7.53e-53 | 173 |
| Msa0401230 | AT5G65350.1 | 85.149 | 101 | 15 | 0 | 1 | 101 | 1 | 101 | 4.21e-52 | 170 |
| Msa0401230 | AT1G13370.1 | 84.158 | 101 | 16 | 0 | 1 | 101 | 1 | 101 | 1.46e-49 | 163 |
| Msa0401230 | AT1G75600.1 | 82.353 | 102 | 18 | 0 | 1 | 102 | 1 | 102 | 1.56e-49 | 163 |
| Msa0401230 | AT1G19890.1 | 79.412 | 102 | 20 | 1 | 1 | 101 | 1 | 102 | 4.38e-46 | 154 |
| Msa0401230 | AT5G27280.1 | 72.632 | 95 | 21 | 1 | 114 | 208 | 67 | 156 | 1.14e-42 | 148 |
| Msa0401230 | AT5G12910.1 | 64.211 | 95 | 29 | 2 | 1 | 95 | 1 | 90 | 2.29e-31 | 116 |
Find 125 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACACTTGAAATGAAAATT+TGG | 0.141025 | 3_2:+26411644 | None:intergenic |
| TCAAATTTAGGTACCATATT+TGG | 0.197714 | 3_2:-26406283 | Msa0401230:three_prime_UTR |
| TTGGCGCGTGGTCTACTTTC+TGG | 0.199366 | 3_2:-26407314 | Msa0401230:CDS |
| CTTTGGTGGCGAGCTGCTTC+CGG | 0.226952 | 3_2:+26411441 | None:intergenic |
| TTCATCTGACTTTGCCCATT+TGG | 0.245081 | 3_2:-26411686 | Msa0401230:five_prime_UTR |
| ATTTGTTGACAGGACAAAAT+TGG | 0.248332 | 3_2:-26407333 | Msa0401230:intron |
| TTTGGTGGCGAGCTGCTTCC+GGG | 0.248437 | 3_2:+26411442 | None:intergenic |
| AGCTGATTTCCGGGCGGCTT+TGG | 0.278168 | 3_2:+26411424 | None:intergenic |
| CAGTCGCCAGAGCTGATTTC+CGG | 0.283620 | 3_2:+26411414 | None:intergenic |
| TAAATTTATAAAACCAAATA+TGG | 0.295857 | 3_2:+26406270 | None:intergenic |
| CAGATGAAGAATTGAATAAT+TGG | 0.297458 | 3_2:+26411701 | None:intergenic |
| AACATAACTAGATCAAATTT+AGG | 0.301558 | 3_2:-26406295 | Msa0401230:three_prime_UTR |
| AGAGGATGGACAACAGGTTC+TGG | 0.304476 | 3_2:-26410787 | Msa0401230:CDS |
| TCTCTCAAAGCAACTGTTCC+AGG | 0.333816 | 3_2:+26411362 | None:intergenic |
| TTACAATTTAGTGTTAAATC+TGG | 0.334140 | 3_2:+26406590 | None:intergenic |
| ACACTACAAGAAATCTAATA+TGG | 0.352207 | 3_2:+26406174 | None:intergenic |
| GTATGGTTCAGATCTGAAAA+TGG | 0.353006 | 3_2:+26411588 | None:intergenic |
| GCTTCTTCACTGTTCCGATT+TGG | 0.360640 | 3_2:+26409506 | None:intergenic |
| TGTACTGTTCCGATTGTTGC+TGG | 0.374712 | 3_2:+26409532 | None:intergenic |
| GATTGGTCAACATTGGAAAT+AGG | 0.374998 | 3_2:-26408328 | Msa0401230:intron |
| GAGCGGAAACGGCACTGCTC+TGG | 0.378623 | 3_2:+26411237 | None:intergenic |
| GTTCCGATTGTTGCTGGAAT+CGG | 0.383649 | 3_2:+26409538 | None:intergenic |
| TGGGATCAGGATGCGGCGAT+GGG | 0.385119 | 3_2:-26410835 | Msa0401230:intron |
| AGTCGCCAGAGCTGATTTCC+GGG | 0.389485 | 3_2:+26411415 | None:intergenic |
| GTGGGATCAGGATGCGGCGA+TGG | 0.394988 | 3_2:-26410836 | Msa0401230:intron |
| TCCACATTTAGCACAACATT+TGG | 0.402176 | 3_2:-26409224 | Msa0401230:CDS |
| TGGCGCGTGGTCTACTTTCT+GGG | 0.403666 | 3_2:-26407313 | Msa0401230:CDS |
| CAAATGCCTTCTTTAGACTT+TGG | 0.406071 | 3_2:+26408072 | None:intergenic |
| TCAGGATGCGGCGATGGGGC+TGG | 0.412806 | 3_2:-26410830 | Msa0401230:intron |
| CGGAAATCAGCTCTGGCGAC+TGG | 0.414881 | 3_2:-26411413 | Msa0401230:CDS |
| AGTTGAAAGAGGAGAGTGAC+AGG | 0.430076 | 3_2:-26406351 | Msa0401230:three_prime_UTR |
| AGCAATGAGCATCCTTCGCC+TGG | 0.430343 | 3_2:+26410669 | None:intergenic |
| TCACGAACAAGACGTTGAAA+TGG | 0.431551 | 3_2:+26411293 | None:intergenic |
| TGATTTCCGGGCGGCTTTGG+TGG | 0.433306 | 3_2:+26411427 | None:intergenic |
| TTGCAGGTTGCTAAGGAGAT+TGG | 0.434372 | 3_2:-26406717 | Msa0401230:intron |
| GTGCCATCGAGAGAAGCTTC+TGG | 0.439702 | 3_2:+26411507 | None:intergenic |
| ATACTCTGTTCCTGCATTCA+AGG | 0.442838 | 3_2:-26407288 | Msa0401230:intron |
| ATGGGTACAAAGAAGCCAAA+TGG | 0.443282 | 3_2:+26411671 | None:intergenic |
| GACGTTGAAATGGAAGTTTA+CGG | 0.451212 | 3_2:+26411303 | None:intergenic |
| TTCTTGTTGAAGAGCGGAAA+CGG | 0.456061 | 3_2:+26411226 | None:intergenic |
| CTGTGACTGTGATTGTGAAA+TGG | 0.464093 | 3_2:+26411546 | None:intergenic |
| TGGAATCAAATTCAAGAAAG+TGG | 0.465747 | 3_2:-26408389 | Msa0401230:CDS |
| AGCCGCCCGGAAATCAGCTC+TGG | 0.469829 | 3_2:-26411420 | Msa0401230:CDS |
| TGGACCTGGTTATACAGGAT+TGG | 0.474300 | 3_2:-26408345 | Msa0401230:CDS |
| GAGGATGGACAACAGGTTCT+GGG | 0.476565 | 3_2:-26410786 | Msa0401230:CDS |
| CCACCGGCGGCAAGGCTCCC+CGG | 0.480154 | 3_2:-26411460 | Msa0401230:CDS |
| ATTTCTATTGCAGGTTGCTA+AGG | 0.481522 | 3_2:-26406724 | Msa0401230:intron |
| ACAGGTAGAGGATGGACAAC+AGG | 0.485934 | 3_2:-26410793 | Msa0401230:CDS |
| AGGTCTACAGTTGGATCAGC+AGG | 0.486223 | 3_2:+26408041 | None:intergenic |
| TTTGGCTTCTTTGTACCCAT+CGG | 0.486540 | 3_2:-26411668 | Msa0401230:five_prime_UTR |
| ACACTTACAACTGCATATTC+AGG | 0.488171 | 3_2:+26408021 | None:intergenic |
| TCGCAAGTCCACCGGCGGCA+AGG | 0.488583 | 3_2:-26411468 | Msa0401230:CDS |
| AGCTCGCCACCAAAGCCGCC+CGG | 0.493101 | 3_2:-26411433 | Msa0401230:CDS |
| CAGTGCTCTTCTGATACTTA+CGG | 0.501233 | 3_2:+26411336 | None:intergenic |
| GAAATGAAAATTTGGACCGA+TGG | 0.502813 | 3_2:+26411652 | None:intergenic |
| CTAGGCTCCTACTGTTGGTA+AGG | 0.504325 | 3_2:-26406380 | Msa0401230:three_prime_UTR |
| GTTCCTGCTGTTAGCAAGGA+TGG | 0.505839 | 3_2:-26410748 | Msa0401230:CDS |
| AAATATTGTCAGTGCTAGAT+TGG | 0.507168 | 3_2:+26410725 | None:intergenic |
| CTTCCGGGGAGCCTTGCCGC+CGG | 0.507682 | 3_2:+26411457 | None:intergenic |
| TGCATATTCAGGTCTACAGT+TGG | 0.508855 | 3_2:+26408032 | None:intergenic |
| TCCAGAGGATAATAGTGTCT+TGG | 0.510277 | 3_2:-26409248 | Msa0401230:CDS |
| TCTAGTTCCTGCTGTTAGCA+AGG | 0.515650 | 3_2:-26410752 | Msa0401230:CDS |
| CTGGTGTTGAGTGCAGCAAC+AGG | 0.516115 | 3_2:-26410811 | Msa0401230:CDS |
| TCTGGATAAGTGACCAGAGC+TGG | 0.518009 | 3_2:+26406608 | None:intergenic |
| TTGAGTGCAGCAACAGGTAG+AGG | 0.519099 | 3_2:-26410805 | Msa0401230:CDS |
| TATACAGGATTGGTCAACAT+TGG | 0.520849 | 3_2:-26408335 | Msa0401230:CDS |
| TGGGTACAAAGAAGCCAAAT+GGG | 0.521154 | 3_2:+26411672 | None:intergenic |
| TCCAAGACACTATTATCCTC+TGG | 0.521863 | 3_2:+26409247 | None:intergenic |
| GGATCACGACAAACCAGCTC+TGG | 0.523313 | 3_2:-26406621 | Msa0401230:three_prime_UTR |
| TTATGTATTTGATTTGATGA+CGG | 0.523469 | 3_2:-26406250 | Msa0401230:three_prime_UTR |
| GGAACAGTACAAAACCAAAT+CGG | 0.525939 | 3_2:-26409520 | Msa0401230:CDS |
| CAACAAGATCATTCATATCA+CGG | 0.527089 | 3_2:-26408187 | Msa0401230:intron |
| GATCTAGTTATGTTAAACTC+TGG | 0.527506 | 3_2:+26406304 | None:intergenic |
| AGGCCGATTCCAGCAACAAT+CGG | 0.528355 | 3_2:-26409541 | Msa0401230:CDS |
| AGAGGGTAGACGAAAGTGGA+AGG | 0.528636 | 3_2:+26411173 | None:intergenic |
| TAAGGCAGAGAAGTTGAAAG+AGG | 0.537111 | 3_2:-26406362 | Msa0401230:three_prime_UTR |
| TGGCCATCCTTGCTAACAGC+AGG | 0.539363 | 3_2:+26410745 | None:intergenic |
| ACAACAGGTTCTGGGATGGA+AGG | 0.540621 | 3_2:-26410778 | Msa0401230:CDS |
| AAATGAAAATTTGGACCGAT+GGG | 0.544221 | 3_2:+26411653 | None:intergenic |
| TATGGTTCAGATCTGAAAAT+GGG | 0.544665 | 3_2:+26411589 | None:intergenic |
| TAGAAGAGGGTAGACGAAAG+TGG | 0.546563 | 3_2:+26411169 | None:intergenic |
| ATGAAGAATTGAATAATTGG+AGG | 0.548246 | 3_2:+26411704 | None:intergenic |
| CTTGAACCAAAGTCTAAAGA+AGG | 0.548290 | 3_2:-26408078 | Msa0401230:CDS |
| CCGGGGAGCCTTGCCGCCGG+TGG | 0.548377 | 3_2:+26411460 | None:intergenic |
| GGACTTGCGAGCAGTCTGCT+TGG | 0.551577 | 3_2:+26411481 | None:intergenic |
| TTTGGGAACAACTCTAGTTG+TGG | 0.551730 | 3_2:-26406668 | Msa0401230:exon |
| CTTCCAGAAGCTTCTCTCGA+TGG | 0.554027 | 3_2:-26411510 | Msa0401230:exon |
| CAACAGGTTCTGGGATGGAA+GGG | 0.554555 | 3_2:-26410777 | Msa0401230:CDS |
| CACTCTTCACTAAATCTCCC+AGG | 0.555459 | 3_2:-26410687 | Msa0401230:CDS |
| TAGGACTAGGCTCCTACTGT+TGG | 0.557420 | 3_2:-26406385 | Msa0401230:three_prime_UTR |
| CAGACTGCTCGCAAGTCCAC+CGG | 0.562052 | 3_2:-26411476 | Msa0401230:CDS |
| GAGATACATACCTTGAATGC+AGG | 0.569384 | 3_2:+26407278 | None:intergenic |
| TTGGTGGCGAGCTGCTTCCG+GGG | 0.573559 | 3_2:+26411443 | None:intergenic |
| TCACTAAATCTCCCAGGCGA+AGG | 0.574635 | 3_2:-26410681 | Msa0401230:CDS |
| GAAGAGTGACCATGGGAAAG+TGG | 0.574914 | 3_2:+26410702 | None:intergenic |
| ACGATAGAGAGGAACAGATA+AGG | 0.576537 | 3_2:+26411767 | None:intergenic |
| ACAATATTTCCACTTTCCCA+TGG | 0.577693 | 3_2:-26410711 | Msa0401230:CDS |
| TTGCTAACAGCAGGAACTAG+AGG | 0.586920 | 3_2:+26410754 | None:intergenic |
| AATCCTCATGCTTACACCGA+TGG | 0.587263 | 3_2:-26410604 | Msa0401230:CDS |
| GTGCAGCAACAGGTAGAGGA+TGG | 0.602472 | 3_2:-26410801 | Msa0401230:CDS |
| ATTTAGTGAAGAGTGACCAT+GGG | 0.605907 | 3_2:+26410695 | None:intergenic |
| ATCGGAACAGTGAAGAAGCA+AGG | 0.606962 | 3_2:-26409502 | Msa0401230:CDS |
| GATTTAGTGAAGAGTGACCA+TGG | 0.607466 | 3_2:+26410694 | None:intergenic |
| ATGGACAACAGGTTCTGGGA+TGG | 0.609246 | 3_2:-26410782 | Msa0401230:CDS |
| GGGATCAGGATGCGGCGATG+GGG | 0.613565 | 3_2:-26410834 | Msa0401230:intron |
| TAATAGCGCGAGTAGTTCGC+TGG | 0.613634 | 3_2:+26410626 | None:intergenic |
| AGAATACGGACGCTTAGAAG+AGG | 0.614308 | 3_2:+26411155 | None:intergenic |
| GAATACGGACGCTTAGAAGA+GGG | 0.616215 | 3_2:+26411156 | None:intergenic |
| AGTAGTTCGCTGGCCACACA+TGG | 0.624678 | 3_2:+26410636 | None:intergenic |
| GCAATGAGCATCCTTCGCCT+GGG | 0.627050 | 3_2:+26410670 | None:intergenic |
| GACACTATTATCCTCTGGAT+AGG | 0.627186 | 3_2:+26409252 | None:intergenic |
| GTGCCATCGGTGTAAGCATG+AGG | 0.630528 | 3_2:+26410601 | None:intergenic |
| GCCAAATGTTGTGCTAAATG+TGG | 0.632734 | 3_2:+26409223 | None:intergenic |
| AAATCAGCTCTGGCGACTGG+AGG | 0.633757 | 3_2:-26411410 | Msa0401230:CDS |
| TTGACCAATCCTGTATAACC+AGG | 0.634222 | 3_2:+26408341 | None:intergenic |
| ACTGCTCGCAAGTCCACCGG+CGG | 0.647164 | 3_2:-26411473 | Msa0401230:CDS |
| AACGAAGAACTGAGAAAGTG+AGG | 0.655894 | 3_2:+26411727 | None:intergenic |
| ATGATGTTCTTGTTGAAGAG+CGG | 0.661430 | 3_2:+26411220 | None:intergenic |
| GTTCCAGGTCTGAATATGTG+TGG | 0.666932 | 3_2:+26411377 | None:intergenic |
| TGTGTTTGTCATAGTGTACG+AGG | 0.667460 | 3_2:-26406642 | Msa0401230:three_prime_UTR |
| GACAGGACAAAATTGGCGCG+TGG | 0.667471 | 3_2:-26407326 | Msa0401230:intron |
| AATCCACACATATTCAGACC+TGG | 0.668518 | 3_2:-26411380 | Msa0401230:CDS |
| TTCTCTGCCTTACCAACAGT+AGG | 0.685066 | 3_2:+26406373 | None:intergenic |
| AGATGTTTACTCCTATCCAG+AGG | 0.692074 | 3_2:-26409263 | Msa0401230:CDS |
| CGCCAGAGCTGATTTCCGGG+CGG | 0.701307 | 3_2:+26411418 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAGTAAAATTAATGA+TGG | + | chr3_2:26406792-26406811 | None:intergenic | 10.0% |
| !! | ATATAAAAATAAGGAAATTA+GGG | + | chr3_2:26406958-26406977 | None:intergenic | 10.0% |
| !! | TATATAAAAATAAGGAAATT+AGG | + | chr3_2:26406959-26406978 | None:intergenic | 10.0% |
| !!! | TTATATATTTTACTGATTAA+TGG | - | chr3_2:26408914-26408933 | Msa0401230:intron | 10.0% |
| !!! | ATACTCAATTTTATAATTAT+CGG | + | chr3_2:26409157-26409176 | None:intergenic | 10.0% |
| !! | TAATTATAAAATTGAGTATT+TGG | - | chr3_2:26409158-26409177 | Msa0401230:intron | 10.0% |
| !! | ATATTATAAGAAATTAAACA+TGG | - | chr3_2:26410950-26410969 | Msa0401230:intron | 10.0% |
| !! | TAAATTTATAAAACCAAATA+TGG | + | chr3_2:26411616-26411635 | None:intergenic | 10.0% |
| !!! | AATTCATGTTTTATAAATTT+AGG | - | chr3_2:26411684-26411703 | Msa0401230:five_prime_UTR | 10.0% |
| !! | TAAATTCTGATTATAATTTG+TGG | - | chr3_2:26407028-26407047 | Msa0401230:intron | 15.0% |
| !!! | AAATTCTGATTATAATTTGT+GGG | - | chr3_2:26407029-26407048 | Msa0401230:intron | 15.0% |
| !! | GATCATGTTTAAATTATAAA+TGG | + | chr3_2:26407559-26407578 | None:intergenic | 15.0% |
| !! | TTATAATTTAAACATGATCT+TGG | - | chr3_2:26407560-26407579 | Msa0401230:intron | 15.0% |
| !! | TATAATTTAAACATGATCTT+GGG | - | chr3_2:26407561-26407580 | Msa0401230:intron | 15.0% |
| !!! | ATGTTATTTTATCTTCTTTT+AGG | - | chr3_2:26407820-26407839 | Msa0401230:intron | 15.0% |
| !!! | TTAGTTTAAATTATTTGTTG+AGG | + | chr3_2:26408507-26408526 | None:intergenic | 15.0% |
| !!! | ATAAATTTAAATTTTCTGTG+TGG | - | chr3_2:26408527-26408546 | Msa0401230:intron | 15.0% |
| !! | TAATTATGCTTATTGTATTA+TGG | - | chr3_2:26408591-26408610 | Msa0401230:intron | 15.0% |
| !!! | TTATTGTTTTTTCCTTATTA+TGG | - | chr3_2:26408952-26408971 | Msa0401230:intron | 15.0% |
| !! | CAAATCTAAACAAAATAATA+TGG | + | chr3_2:26409283-26409302 | None:intergenic | 15.0% |
| !! | TTGATATATAATTTATGGTA+TGG | + | chr3_2:26409412-26409431 | None:intergenic | 15.0% |
| !!! | AAATGATTACAAATTTTGAT+TGG | - | chr3_2:26409474-26409493 | Msa0401230:intron | 15.0% |
| !!! | ACAAATGTTTTCTTTTATAT+GGG | + | chr3_2:26410466-26410485 | None:intergenic | 15.0% |
| !!! | AACAAATGTTTTCTTTTATA+TGG | + | chr3_2:26410467-26410486 | None:intergenic | 15.0% |
| !! | TTTAATCTATTTATCCAAAA+GGG | + | chr3_2:26411330-26411349 | None:intergenic | 15.0% |
| !!! | TTTTAATCTATTTATCCAAA+AGG | + | chr3_2:26411331-26411350 | None:intergenic | 15.0% |
| !! | GATAAATAGATTAAAATGTT+TGG | - | chr3_2:26411335-26411354 | Msa0401230:CDS | 15.0% |
| !!! | TTCCTTATTTTTATATACGA+TGG | - | chr3_2:26406962-26406981 | Msa0401230:intron | 20.0% |
| !! | ATCCATCGTATATAAAAATA+AGG | + | chr3_2:26406967-26406986 | None:intergenic | 20.0% |
| !! | GATGTTATAAACAAAATAGT+TGG | + | chr3_2:26407786-26407805 | None:intergenic | 20.0% |
| !!! | CTATTTTGTTTATAACATCT+TGG | - | chr3_2:26407787-26407806 | Msa0401230:intron | 20.0% |
| !!! | TTTTGGGAAAGAAAAAAAAA+AGG | + | chr3_2:26408248-26408267 | None:intergenic | 20.0% |
| !!! | CAAAACAACAAAATTAGTTT+CGG | - | chr3_2:26408304-26408323 | Msa0401230:intron | 20.0% |
| !!! | TTTGAGTTTTAAGTTTTAAC+AGG | + | chr3_2:26408809-26408828 | None:intergenic | 20.0% |
| !! | GTCACTTGATATATAATTTA+TGG | + | chr3_2:26409417-26409436 | None:intergenic | 20.0% |
| !! | GTTGCTATATAATAACTAAA+AGG | + | chr3_2:26409656-26409675 | None:intergenic | 20.0% |
| !! | TCTGTTATAATTTCTTTCTT+AGG | - | chr3_2:26409777-26409796 | Msa0401230:intron | 20.0% |
| !! | AGATTATACACTTAATTACA+AGG | + | chr3_2:26410032-26410051 | None:intergenic | 20.0% |
| !! | TAATTATCTAACCATTTGAT+TGG | - | chr3_2:26410302-26410321 | Msa0401230:intron | 20.0% |
| !!! | GGTAACATTAAATTTTACAA+AGG | + | chr3_2:26410670-26410689 | None:intergenic | 20.0% |
| !! | ATAGAAATCTTATCTAACAT+AGG | - | chr3_2:26410973-26410992 | Msa0401230:intron | 20.0% |
| !! | AAACAAACAGAAAAATTACA+AGG | - | chr3_2:26411023-26411042 | Msa0401230:intron | 20.0% |
| !! | TTACAATTTAGTGTTAAATC+TGG | + | chr3_2:26411296-26411315 | None:intergenic | 20.0% |
| !! | ATTTAACACTAAATTGTAAG+TGG | - | chr3_2:26411297-26411316 | Msa0401230:CDS | 20.0% |
| !!! | TTGTGATTATGTGTTTTTTT+AGG | - | chr3_2:26411479-26411498 | Msa0401230:CDS | 20.0% |
| !! | AACATAACTAGATCAAATTT+AGG | - | chr3_2:26411588-26411607 | Msa0401230:five_prime_UTR | 20.0% |
| !!! | TTATGTATTTGATTTGATGA+CGG | - | chr3_2:26411633-26411652 | Msa0401230:five_prime_UTR | 20.0% |
| ! | ATGAAGAATTGAATAATTGG+AGG | + | chr3_2:26406182-26406201 | None:intergenic | 25.0% |
| ! | CAGATGAAGAATTGAATAAT+TGG | + | chr3_2:26406185-26406204 | None:intergenic | 25.0% |
| ! | CAACACTTGAAATGAAAATT+TGG | + | chr3_2:26406242-26406261 | None:intergenic | 25.0% |
| !!! | TGTTTTTGTTCAGGTAATTA+TGG | - | chr3_2:26407305-26407324 | Msa0401230:CDS | 25.0% |
| !! | TCAGGTAATTATGGTTTTTA+AGG | - | chr3_2:26407314-26407333 | Msa0401230:CDS | 25.0% |
| !!! | ATTATGGTTTTTAAGGAAGT+AGG | - | chr3_2:26407321-26407340 | Msa0401230:CDS | 25.0% |
| !!! | AAATTTTACCGTTTGAGTTT+CGG | + | chr3_2:26407391-26407410 | None:intergenic | 25.0% |
| ! | ATTATTTATGTGAACTGTCA+TGG | - | chr3_2:26407453-26407472 | Msa0401230:intron | 25.0% |
| ! | TAAATTATAAATGGCATGTC+CGG | + | chr3_2:26407550-26407569 | None:intergenic | 25.0% |
| ! | GATTCAAGTCTAATGTATAT+GGG | + | chr3_2:26407737-26407756 | None:intergenic | 25.0% |
| ! | TGATTCAAGTCTAATGTATA+TGG | + | chr3_2:26407738-26407757 | None:intergenic | 25.0% |
| !! | AGCTTTTATTGTAATAGTGT+GGG | + | chr3_2:26407930-26407949 | None:intergenic | 25.0% |
| !! | AAGCTTTTATTGTAATAGTG+TGG | + | chr3_2:26407931-26407950 | None:intergenic | 25.0% |
| ! | TGAATGTAATTAGACCTATT+GGG | + | chr3_2:26408152-26408171 | None:intergenic | 25.0% |
| ! | ATGAATGTAATTAGACCTAT+TGG | + | chr3_2:26408153-26408172 | None:intergenic | 25.0% |
| ! | ATAGGTCTAATTACATTCAT+TGG | - | chr3_2:26408153-26408172 | Msa0401230:intron | 25.0% |
| !!! | GAATTGGTGTTGATAATTTT+GGG | + | chr3_2:26408264-26408283 | None:intergenic | 25.0% |
| !!! | ATTTTGTTGTTTTGTTGTTG+TGG | + | chr3_2:26408298-26408317 | None:intergenic | 25.0% |
| ! | AAAACAAGATACGAAACAAA+AGG | + | chr3_2:26408454-26408473 | None:intergenic | 25.0% |
| !! | TATCATATTGCTTTCCTTTT+TGG | - | chr3_2:26408844-26408863 | Msa0401230:intron | 25.0% |
| !! | ATCATATTGCTTTCCTTTTT+GGG | - | chr3_2:26408845-26408864 | Msa0401230:intron | 25.0% |
| ! | ATCCATGAAAACATATTTGT+TGG | - | chr3_2:26408985-26409004 | Msa0401230:intron | 25.0% |
| ! | TCCATGAAAACATATTTGTT+GGG | - | chr3_2:26408986-26409005 | Msa0401230:intron | 25.0% |
| ! | ATATTTAATCCAGCAAACAA+GGG | + | chr3_2:26409030-26409049 | None:intergenic | 25.0% |
| ! | TATATTTAATCCAGCAAACA+AGG | + | chr3_2:26409031-26409050 | None:intergenic | 25.0% |
| !!! | TTGATAATGTTGAGATTAGA+AGG | - | chr3_2:26409072-26409091 | Msa0401230:intron | 25.0% |
| !! | TGATAATGTTGAGATTAGAA+GGG | - | chr3_2:26409073-26409092 | Msa0401230:intron | 25.0% |
| ! | AATTCATAAGAACCAACATA+TGG | + | chr3_2:26409597-26409616 | None:intergenic | 25.0% |
| ! | ATAGAGATACAAATAGCTAA+TGG | + | chr3_2:26410195-26410214 | None:intergenic | 25.0% |
| ! | GTTTATACATACACTCAAAA+TGG | - | chr3_2:26410227-26410246 | Msa0401230:intron | 25.0% |
| ! | TTCTAATGTTTGAAGGATAA+TGG | + | chr3_2:26410832-26410851 | None:intergenic | 25.0% |
| !!! | TTCTTGTTTCTAATGTTTGA+AGG | + | chr3_2:26410839-26410858 | None:intergenic | 25.0% |
| ! | TTCAAACATTAGAAACAAGA+AGG | - | chr3_2:26410838-26410857 | Msa0401230:intron | 25.0% |
| !!! | ATTACAGCTTTGAACATATT+TGG | + | chr3_2:26410871-26410890 | None:intergenic | 25.0% |
| !! | ATCCTGAATTTTCATCTATT+CGG | - | chr3_2:26410902-26410921 | Msa0401230:intron | 25.0% |
| ! | CAAAGTTATATGACAACATT+AGG | + | chr3_2:26411136-26411155 | None:intergenic | 25.0% |
| !!! | ACTAAATTGTAAGTGGATTA+TGG | - | chr3_2:26411304-26411323 | Msa0401230:CDS | 25.0% |
| ! | AAAAACACATAATCACAACA+AGG | + | chr3_2:26411477-26411496 | None:intergenic | 25.0% |
| !!! | TTATGTGTTTTTTTAGGACT+AGG | - | chr3_2:26411485-26411504 | Msa0401230:CDS | 25.0% |
| ! | TCAAATTTAGGTACCATATT+TGG | - | chr3_2:26411600-26411619 | Msa0401230:five_prime_UTR | 25.0% |
| ! | ACACTACAAGAAATCTAATA+TGG | + | chr3_2:26411712-26411731 | None:intergenic | 25.0% |
| AAATGAAAATTTGGACCGAT+GGG | + | chr3_2:26406233-26406252 | None:intergenic | 30.0% | |
| TATGGTTCAGATCTGAAAAT+GGG | + | chr3_2:26406297-26406316 | None:intergenic | 30.0% | |
| ! | TGTGAGATTTTAGATGTGTA+TGG | + | chr3_2:26406315-26406334 | None:intergenic | 30.0% |
| !! | TTTTTCATTTCAAGTGACGA+TGG | - | chr3_2:26406814-26406833 | Msa0401230:intron | 30.0% |
| GAGAGAAACATTACATACAA+TGG | + | chr3_2:26406932-26406951 | None:intergenic | 30.0% | |
| ! | TGATTATAATTTGTGGGATC+AGG | - | chr3_2:26407035-26407054 | Msa0401230:intron | 30.0% |
| AAATATTGTCAGTGCTAGAT+TGG | + | chr3_2:26407161-26407180 | None:intergenic | 30.0% | |
| TATAATGCAACATTCGTAAC+AGG | + | chr3_2:26407363-26407382 | None:intergenic | 30.0% | |
| CTGATAGTTGTCATGAATAA+GGG | - | chr3_2:26407519-26407538 | Msa0401230:intron | 30.0% | |
| TGATAGTTGTCATGAATAAG+GGG | - | chr3_2:26407520-26407539 | Msa0401230:intron | 30.0% | |
| AGTTAAGTTTCAAACTCCAA+TGG | + | chr3_2:26407599-26407618 | None:intergenic | 30.0% | |
| ! | CTCAAAGTCATGATTCTTTT+TGG | + | chr3_2:26407874-26407893 | None:intergenic | 30.0% |
| ! | TTTTATTGTAATAGTGTGGG+GGG | + | chr3_2:26407927-26407946 | None:intergenic | 30.0% |
| ! | CTTTTATTGTAATAGTGTGG+GGG | + | chr3_2:26407928-26407947 | None:intergenic | 30.0% |
| ! | GCTTTTATTGTAATAGTGTG+GGG | + | chr3_2:26407929-26407948 | None:intergenic | 30.0% |
| CAAGAAGTTGAAATCGTATT+TGG | + | chr3_2:26408209-26408228 | None:intergenic | 30.0% | |
| CAAATACGATTTCAACTTCT+TGG | - | chr3_2:26408207-26408226 | Msa0401230:CDS | 30.0% | |
| !!! | CGAATTGGTGTTGATAATTT+TGG | + | chr3_2:26408265-26408284 | None:intergenic | 30.0% |
| AGCATAATTAGTACATAGTG+AGG | + | chr3_2:26408581-26408600 | None:intergenic | 30.0% | |
| TGAAAAGTCAATGCCAAAAA+AGG | + | chr3_2:26408685-26408704 | None:intergenic | 30.0% | |
| AAGGGAAATTGTATCATTGA+AGG | + | chr3_2:26408732-26408751 | None:intergenic | 30.0% | |
| ! | TCCCAACAAATATGTTTTCA+TGG | + | chr3_2:26408990-26409009 | None:intergenic | 30.0% |
| TTGCATTTCTCAAAGATCTA+AGG | - | chr3_2:26409096-26409115 | Msa0401230:intron | 30.0% | |
| AAGAGCTTAAGATGTTATGT+TGG | - | chr3_2:26409257-26409276 | Msa0401230:CDS | 30.0% | |
| TGGAATCAAATTCAAGAAAG+TGG | - | chr3_2:26409494-26409513 | Msa0401230:intron | 30.0% | |
| !! | CAAGAAGTTGATCCAATTTT+TGG | - | chr3_2:26409518-26409537 | Msa0401230:CDS | 30.0% |
| ATAAGAACCAACATATGGTA+GGG | + | chr3_2:26409592-26409611 | None:intergenic | 30.0% | |
| CAACAAGATCATTCATATCA+CGG | - | chr3_2:26409696-26409715 | Msa0401230:intron | 30.0% | |
| GATTATCTAAGTTTGTGTGT+AGG | - | chr3_2:26409894-26409913 | Msa0401230:intron | 30.0% | |
| ! | AATTTTGTCCTGTCAACAAA+TGG | + | chr3_2:26410551-26410570 | None:intergenic | 30.0% |
| ! | ATTTGTTGACAGGACAAAAT+TGG | - | chr3_2:26410550-26410569 | Msa0401230:intron | 30.0% |
| !! | CGTAGTTGATGAATTTACAA+AGG | + | chr3_2:26410691-26410710 | None:intergenic | 30.0% |
| !! | ATATATTGATTCAGCTCATC+TGG | - | chr3_2:26410754-26410773 | Msa0401230:CDS | 30.0% |
| GAATAGATGAAAATTCAGGA+TGG | + | chr3_2:26410903-26410922 | None:intergenic | 30.0% | |
| GAAAAATTACAAGGAGATTG+TGG | - | chr3_2:26411032-26411051 | Msa0401230:intron | 30.0% | |
| TCAATAGTGTATATATGCTC+TGG | - | chr3_2:26411068-26411087 | Msa0401230:intron | 30.0% | |
| ACTTTGTACATTTCTATTGC+AGG | - | chr3_2:26411150-26411169 | Msa0401230:intron | 30.0% | |
| ! | AAACCTCTTGAGAGATTTTT+GGG | - | chr3_2:26411442-26411461 | Msa0401230:CDS | 30.0% |
| GATCTAGTTATGTTAAACTC+TGG | + | chr3_2:26411582-26411601 | None:intergenic | 30.0% | |
| !! | GAAGTGTTTTTACGATAGAG+AGG | + | chr3_2:26406130-26406149 | None:intergenic | 35.0% |
| GAAATGAAAATTTGGACCGA+TGG | + | chr3_2:26406234-26406253 | None:intergenic | 35.0% | |
| GTATGGTTCAGATCTGAAAA+TGG | + | chr3_2:26406298-26406317 | None:intergenic | 35.0% | |
| GACGTTGAAATGGAAGTTTA+CGG | + | chr3_2:26406583-26406602 | None:intergenic | 35.0% | |
| ATGATGTTCTTGTTGAAGAG+CGG | + | chr3_2:26406666-26406685 | None:intergenic | 35.0% | |
| GATTGATCGAGAAGAGAATA+CGG | + | chr3_2:26406745-26406764 | None:intergenic | 35.0% | |
| ATGGAGAAACAACGATTAGT+GGG | + | chr3_2:26406913-26406932 | None:intergenic | 35.0% | |
| AATGGAGAAACAACGATTAG+TGG | + | chr3_2:26406914-26406933 | None:intergenic | 35.0% | |
| ACAATATTTCCACTTTCCCA+TGG | - | chr3_2:26407172-26407191 | Msa0401230:intron | 35.0% | |
| ATTTAGTGAAGAGTGACCAT+GGG | + | chr3_2:26407191-26407210 | None:intergenic | 35.0% | |
| ATATCTGACCGAAACTCAAA+CGG | - | chr3_2:26407380-26407399 | Msa0401230:intron | 35.0% | |
| GCTGATAGTTGTCATGAATA+AGG | - | chr3_2:26407518-26407537 | Msa0401230:intron | 35.0% | |
| ATCAGCTTTCCTAATTCTCA+GGG | + | chr3_2:26407672-26407691 | None:intergenic | 35.0% | |
| TATCAGCTTTCCTAATTCTC+AGG | + | chr3_2:26407673-26407692 | None:intergenic | 35.0% | |
| TGAGAATTAGGAAAGCTGAT+AGG | - | chr3_2:26407672-26407691 | Msa0401230:intron | 35.0% | |
| TTTGTGATACGTGTACTTTG+AGG | - | chr3_2:26408040-26408059 | Msa0401230:CDS | 35.0% | |
| ! | ATCAACACCAATTCGTTTTC+TGG | - | chr3_2:26408270-26408289 | Msa0401230:intron | 35.0% |
| TTCGGAATTTGTAACAACAC+AGG | - | chr3_2:26408322-26408341 | Msa0401230:intron | 35.0% | |
| GGAACAGTACAAAACCAAAT+CGG | - | chr3_2:26408363-26408382 | Msa0401230:CDS | 35.0% | |
| TCCACATTTAGCACAACATT+TGG | - | chr3_2:26408659-26408678 | Msa0401230:intron | 35.0% | |
| ! | TGACTTTTCATCGCTTCAAA+AGG | - | chr3_2:26408695-26408714 | Msa0401230:intron | 35.0% |
| !! | CAATTTCCCTTTAGAGTACT+TGG | - | chr3_2:26408741-26408760 | Msa0401230:intron | 35.0% |
| TAGCAAAAGTAAACGCTCAA+GGG | + | chr3_2:26408877-26408896 | None:intergenic | 35.0% | |
| ATAGCAAAAGTAAACGCTCA+AGG | + | chr3_2:26408878-26408897 | None:intergenic | 35.0% | |
| ATCTCATCACAGCCATAATA+AGG | + | chr3_2:26408967-26408986 | None:intergenic | 35.0% | |
| ! | TTTTGTCTTTCTACTCTGCT+AGG | - | chr3_2:26409371-26409390 | Msa0401230:intron | 35.0% |
| GTATAACCAGGTCCAAAAAT+TGG | + | chr3_2:26409533-26409552 | None:intergenic | 35.0% | |
| !! | ATTTTTGGACCTGGTTATAC+AGG | - | chr3_2:26409533-26409552 | Msa0401230:CDS | 35.0% |
| !! | TATACAGGATTGGTCAACAT+TGG | - | chr3_2:26409548-26409567 | Msa0401230:intron | 35.0% |
| ! | GATTGGTCAACATTGGAAAT+AGG | - | chr3_2:26409555-26409574 | Msa0401230:intron | 35.0% |
| TAAGAACCAACATATGGTAG+GGG | + | chr3_2:26409591-26409610 | None:intergenic | 35.0% | |
| CATAAGAACCAACATATGGT+AGG | + | chr3_2:26409593-26409612 | None:intergenic | 35.0% | |
| CTTGAACCAAAGTCTAAAGA+AGG | - | chr3_2:26409805-26409824 | Msa0401230:intron | 35.0% | |
| CAAATGCCTTCTTTAGACTT+TGG | + | chr3_2:26409814-26409833 | None:intergenic | 35.0% | |
| ACACTTACAACTGCATATTC+AGG | + | chr3_2:26409865-26409884 | None:intergenic | 35.0% | |
| CATGTTACTGAATAGCACTA+CGG | + | chr3_2:26410072-26410091 | None:intergenic | 35.0% | |
| ! | CTTTTCTCTCTTACTCAACA+CGG | - | chr3_2:26410111-26410130 | Msa0401230:intron | 35.0% |
| ACTCAAAATGGTGTATGTCA+TGG | - | chr3_2:26410239-26410258 | Msa0401230:intron | 35.0% | |
| CTCAAGAACTTCCAATCAAA+TGG | + | chr3_2:26410316-26410335 | None:intergenic | 35.0% | |
| AGTGAAGATGATGTTCTTCA+AGG | - | chr3_2:26410487-26410506 | Msa0401230:intron | 35.0% | |
| GTGAAGATGATGTTCTTCAA+GGG | - | chr3_2:26410488-26410507 | Msa0401230:intron | 35.0% | |
| ! | ATAAGCATCCATTTGTTGAC+AGG | - | chr3_2:26410540-26410559 | Msa0401230:intron | 35.0% |
| CAGATGAATTTACTACGCTA+TGG | + | chr3_2:26410632-26410651 | None:intergenic | 35.0% | |
| TGCCGAATAGATGAAAATTC+AGG | + | chr3_2:26410907-26410926 | None:intergenic | 35.0% | |
| AATCAGAAACCAAAACAGGA+GGG | + | chr3_2:26411113-26411132 | None:intergenic | 35.0% | |
| TAGGAATCAGAAACCAAAAC+AGG | + | chr3_2:26411117-26411136 | None:intergenic | 35.0% | |
| ATTTCTATTGCAGGTTGCTA+AGG | - | chr3_2:26411159-26411178 | Msa0401230:intron | 35.0% | |
| ! | TCAAGTCTTCGAACGATTTT+TGG | - | chr3_2:26411197-26411216 | Msa0401230:CDS | 35.0% |
| ! | CAAGTCTTCGAACGATTTTT+GGG | - | chr3_2:26411198-26411217 | Msa0401230:CDS | 35.0% |
| ! | GAAACCTCTTGAGAGATTTT+TGG | - | chr3_2:26411441-26411460 | Msa0401230:CDS | 35.0% |
| AAACCCAAAAATCTCTCAAG+AGG | + | chr3_2:26411448-26411467 | None:intergenic | 35.0% | |
| ACGATAGAGAGGAACAGATA+AGG | + | chr3_2:26406119-26406138 | None:intergenic | 40.0% | |
| AACGAAGAACTGAGAAAGTG+AGG | + | chr3_2:26406159-26406178 | None:intergenic | 40.0% | |
| TTCATCTGACTTTGCCCATT+TGG | - | chr3_2:26406197-26406216 | Msa0401230:three_prime_UTR | 40.0% | |
| TGGGTACAAAGAAGCCAAAT+GGG | + | chr3_2:26406214-26406233 | None:intergenic | 40.0% | |
| ATGGGTACAAAGAAGCCAAA+TGG | + | chr3_2:26406215-26406234 | None:intergenic | 40.0% | |
| ! | TTTGGCTTCTTTGTACCCAT+CGG | - | chr3_2:26406215-26406234 | Msa0401230:three_prime_UTR | 40.0% |
| CTGTGACTGTGATTGTGAAA+TGG | + | chr3_2:26406340-26406359 | None:intergenic | 40.0% | |
| AATCCACACATATTCAGACC+TGG | - | chr3_2:26406503-26406522 | Msa0401230:intron | 40.0% | |
| CAGTGCTCTTCTGATACTTA+CGG | + | chr3_2:26406550-26406569 | None:intergenic | 40.0% | |
| TCACGAACAAGACGTTGAAA+TGG | + | chr3_2:26406593-26406612 | None:intergenic | 40.0% | |
| TTCTTGTTGAAGAGCGGAAA+CGG | + | chr3_2:26406660-26406679 | None:intergenic | 40.0% | |
| ! | ACGAAAGTGGAAGGTTTTCT+TGG | + | chr3_2:26406704-26406723 | None:intergenic | 40.0% |
| AAGGTTGAAGTTGAGTTCGT+TGG | + | chr3_2:26406881-26406900 | None:intergenic | 40.0% | |
| ACTCAACTTCAACCTTTCTC+AGG | - | chr3_2:26406885-26406904 | Msa0401230:intron | 40.0% | |
| ! | TAATTTGTGGGATCAGGATG+CGG | - | chr3_2:26407041-26407060 | Msa0401230:intron | 40.0% |
| GATTTAGTGAAGAGTGACCA+TGG | + | chr3_2:26407192-26407211 | None:intergenic | 40.0% | |
| ! | GCTTTTACTTGTACCATGTG+TGG | - | chr3_2:26407234-26407253 | Msa0401230:intron | 40.0% |
| CTGAACAAAAACAGTGCCAT+CGG | + | chr3_2:26407298-26407317 | None:intergenic | 40.0% | |
| TGCAACATTCGTAACAGGTT+TGG | + | chr3_2:26407358-26407377 | None:intergenic | 40.0% | |
| TAGCTTAGCTGCTCAAAGTT+TGG | - | chr3_2:26407426-26407445 | Msa0401230:intron | 40.0% | |
| ! | TGTCATGGATTGCATAAGAC+AGG | - | chr3_2:26407468-26407487 | Msa0401230:intron | 40.0% |
| GTCATGAATAAGGGGAAATC+CGG | - | chr3_2:26407528-26407547 | Msa0401230:intron | 40.0% | |
| ACTCGAAGTCTAGCATCATA+TGG | + | chr3_2:26407646-26407665 | None:intergenic | 40.0% | |
| TATGATGCTAGACTTCGAGT+TGG | - | chr3_2:26407646-26407665 | Msa0401230:intron | 40.0% | |
| TTAGACCTATTGGGTACAGT+TGG | + | chr3_2:26408143-26408162 | None:intergenic | 40.0% | |
| TGTGGATCCAGAAAACGAAT+TGG | + | chr3_2:26408280-26408299 | None:intergenic | 40.0% | |
| TCGCAAAAACAGTGAGAGAT+CGG | - | chr3_2:26408415-26408434 | Msa0401230:CDS | 40.0% | |
| AGATGTTTACTCCTATCCAG+AGG | - | chr3_2:26408620-26408639 | Msa0401230:intron | 40.0% | |
| GACACTATTATCCTCTGGAT+AGG | + | chr3_2:26408634-26408653 | None:intergenic | 40.0% | |
| TCCAGAGGATAATAGTGTCT+TGG | - | chr3_2:26408635-26408654 | Msa0401230:intron | 40.0% | |
| TCCAAGACACTATTATCCTC+TGG | + | chr3_2:26408639-26408658 | None:intergenic | 40.0% | |
| GCCAAATGTTGTGCTAAATG+TGG | + | chr3_2:26408663-26408682 | None:intergenic | 40.0% | |
| !!! | GCACAACATTTGGCCTTTTT+TGG | - | chr3_2:26408669-26408688 | Msa0401230:intron | 40.0% |
| GCGTAACCAAGTACTCTAAA+GGG | + | chr3_2:26408750-26408769 | None:intergenic | 40.0% | |
| AACAAATGCAGGTCTCATAG+AGG | + | chr3_2:26408777-26408796 | None:intergenic | 40.0% | |
| GGCATCAAGTTAACAAATGC+AGG | + | chr3_2:26408788-26408807 | None:intergenic | 40.0% | |
| !!! | TTGCTTTCCTTTTTGGGACA+CGG | - | chr3_2:26408851-26408870 | Msa0401230:intron | 40.0% |
| !! | GTTGATCCAATTTTTGGACC+TGG | - | chr3_2:26409524-26409543 | Msa0401230:CDS | 40.0% |
| TTGACCAATCCTGTATAACC+AGG | + | chr3_2:26409545-26409564 | None:intergenic | 40.0% | |
| CATTGGAAATAGGTGAGAGT+TGG | - | chr3_2:26409565-26409584 | Msa0401230:intron | 40.0% | |
| GAATTGAGCTGAATGCAAAC+TGG | + | chr3_2:26409759-26409778 | None:intergenic | 40.0% | |
| TGCATATTCAGGTCTACAGT+TGG | + | chr3_2:26409854-26409873 | None:intergenic | 40.0% | |
| CAGTTGTAAGTGTGCTTGTT+TGG | - | chr3_2:26409872-26409891 | Msa0401230:intron | 40.0% | |
| TTACTGAATAGCACTACGGA+AGG | + | chr3_2:26410068-26410087 | None:intergenic | 40.0% | |
| ! | CGTAGTGCTATTCAGTAACA+TGG | - | chr3_2:26410070-26410089 | Msa0401230:intron | 40.0% |
| ATACTCTGTTCCTGCATTCA+AGG | - | chr3_2:26410595-26410614 | Msa0401230:CDS | 40.0% | |
| GAGATACATACCTTGAATGC+AGG | + | chr3_2:26410608-26410627 | None:intergenic | 40.0% | |
| TACGACTGCTGTAAGATTTC+TGG | - | chr3_2:26410707-26410726 | Msa0401230:CDS | 40.0% | |
| GATGCACGTACAGATAAGTT+GGG | + | chr3_2:26410810-26410829 | None:intergenic | 40.0% | |
| AGATGAAAATTCAGGATGGC+TGG | + | chr3_2:26410899-26410918 | None:intergenic | 40.0% | |
| TTACAAGGAGATTGTGGTAC+TGG | - | chr3_2:26411038-26411057 | Msa0401230:intron | 40.0% | |
| ! | TATATATGCTCTGGTAGTGC+TGG | - | chr3_2:26411077-26411096 | Msa0401230:intron | 40.0% |
| ATCAGAAACCAAAACAGGAG+GGG | + | chr3_2:26411112-26411131 | None:intergenic | 40.0% | |
| GAATCAGAAACCAAAACAGG+AGG | + | chr3_2:26411114-26411133 | None:intergenic | 40.0% | |
| TTTGGGAACAACTCTAGTTG+TGG | - | chr3_2:26411215-26411234 | Msa0401230:CDS | 40.0% | |
| TGTGTTTGTCATAGTGTACG+AGG | - | chr3_2:26411241-26411260 | Msa0401230:CDS | 40.0% | |
| !!! | TAAGTGGATTATGGCCCTTT+TGG | - | chr3_2:26411313-26411332 | Msa0401230:CDS | 40.0% |
| TAAGGCAGAGAAGTTGAAAG+AGG | - | chr3_2:26411521-26411540 | Msa0401230:five_prime_UTR | 40.0% | |
| GTTCCAGGTCTGAATATGTG+TGG | + | chr3_2:26406509-26406528 | None:intergenic | 45.0% | |
| TCTCTCAAAGCAACTGTTCC+AGG | + | chr3_2:26406524-26406543 | None:intergenic | 45.0% | |
| TAGAAGAGGGTAGACGAAAG+TGG | + | chr3_2:26406717-26406736 | None:intergenic | 45.0% | |
| GAATACGGACGCTTAGAAGA+GGG | + | chr3_2:26406730-26406749 | None:intergenic | 45.0% | |
| AGAATACGGACGCTTAGAAG+AGG | + | chr3_2:26406731-26406750 | None:intergenic | 45.0% | |
| GATTAGTGGGAACCTGAGAA+AGG | + | chr3_2:26406900-26406919 | None:intergenic | 45.0% | |
| TTGCTAACAGCAGGAACTAG+AGG | + | chr3_2:26407132-26407151 | None:intergenic | 45.0% | |
| ! | TCTAGTTCCTGCTGTTAGCA+AGG | - | chr3_2:26407131-26407150 | Msa0401230:intron | 45.0% |
| CACTCTTCACTAAATCTCCC+AGG | - | chr3_2:26407196-26407215 | Msa0401230:intron | 45.0% | |
| AATCCTCATGCTTACACCGA+TGG | - | chr3_2:26407279-26407298 | Msa0401230:intron | 45.0% | |
| !!! | CGATGGCACTGTTTTTGTTC+AGG | - | chr3_2:26407296-26407315 | Msa0401230:CDS | 45.0% |
| TGGGATAACGAGCTAACCAT+TGG | - | chr3_2:26407580-26407599 | Msa0401230:intron | 45.0% | |
| TTGTGATACGTGTACTGTGC+TGG | - | chr3_2:26407984-26408003 | Msa0401230:intron | 45.0% | |
| AGTTGAGAGAATGGTCATGG+TGG | + | chr3_2:26408094-26408113 | None:intergenic | 45.0% | |
| ACCATGACCATTCTCTCAAC+TGG | - | chr3_2:26408093-26408112 | Msa0401230:intron | 45.0% | |
| ACCAGTTGAGAGAATGGTCA+TGG | + | chr3_2:26408097-26408116 | None:intergenic | 45.0% | |
| ATGACCATTCTCTCAACTGG+TGG | - | chr3_2:26408096-26408115 | Msa0401230:intron | 45.0% | |
| GAATCCACCAGTTGAGAGAA+TGG | + | chr3_2:26408103-26408122 | None:intergenic | 45.0% | |
| TCTGTCCAACTGTACCCAAT+AGG | - | chr3_2:26408135-26408154 | Msa0401230:intron | 45.0% | |
| GTTCCGATTGTTGCTGGAAT+CGG | + | chr3_2:26408348-26408367 | None:intergenic | 45.0% | |
| TGTACTGTTCCGATTGTTGC+TGG | + | chr3_2:26408354-26408373 | None:intergenic | 45.0% | |
| GCTTCTTCACTGTTCCGATT+TGG | + | chr3_2:26408380-26408399 | None:intergenic | 45.0% | |
| ATCGGAACAGTGAAGAAGCA+AGG | - | chr3_2:26408381-26408400 | Msa0401230:CDS | 45.0% | |
| CGCGTAACCAAGTACTCTAA+AGG | + | chr3_2:26408751-26408770 | None:intergenic | 45.0% | |
| ! | TTAGAGTACTTGGTTACGCG+TGG | - | chr3_2:26408751-26408770 | Msa0401230:intron | 45.0% |
| ! | CATGTTGAACCCTTGTTTGC+TGG | - | chr3_2:26409018-26409037 | Msa0401230:intron | 45.0% |
| TGGACCTGGTTATACAGGAT+TGG | - | chr3_2:26409538-26409557 | Msa0401230:CDS | 45.0% | |
| ATACTGCACACACACATGAC+TGG | + | chr3_2:26410426-26410445 | None:intergenic | 45.0% | |
| GTCATGTGTGTGTGCAGTAT+AGG | - | chr3_2:26410426-26410445 | Msa0401230:intron | 45.0% | |
| GGATGCACGTACAGATAAGT+TGG | + | chr3_2:26410811-26410830 | None:intergenic | 45.0% | |
| TTGCAGGTTGCTAAGGAGAT+TGG | - | chr3_2:26411166-26411185 | Msa0401230:CDS | 45.0% | |
| TTCTCTGCCTTACCAACAGT+AGG | + | chr3_2:26411513-26411532 | None:intergenic | 45.0% | |
| AGTTGAAAGAGGAGAGTGAC+AGG | - | chr3_2:26411532-26411551 | Msa0401230:five_prime_UTR | 45.0% | |
| !!! | TTTTGATAATTTTTTTATTT+TGG | - | chr3_2:26410274-26410293 | Msa0401230:intron | 5.0% |
| CTTCCAGAAGCTTCTCTCGA+TGG | - | chr3_2:26406373-26406392 | Msa0401230:three_prime_UTR | 50.0% | |
| AGAGGGTAGACGAAAGTGGA+AGG | + | chr3_2:26406713-26406732 | None:intergenic | 50.0% | |
| TTGAGTGCAGCAACAGGTAG+AGG | - | chr3_2:26407078-26407097 | Msa0401230:intron | 50.0% | |
| ACAGGTAGAGGATGGACAAC+AGG | - | chr3_2:26407090-26407109 | Msa0401230:intron | 50.0% | |
| AGAGGATGGACAACAGGTTC+TGG | - | chr3_2:26407096-26407115 | Msa0401230:intron | 50.0% | |
| GAGGATGGACAACAGGTTCT+GGG | - | chr3_2:26407097-26407116 | Msa0401230:intron | 50.0% | |
| !! | ATGGACAACAGGTTCTGGGA+TGG | - | chr3_2:26407101-26407120 | Msa0401230:intron | 50.0% |
| !! | ACAACAGGTTCTGGGATGGA+AGG | - | chr3_2:26407105-26407124 | Msa0401230:intron | 50.0% |
| !! | CAACAGGTTCTGGGATGGAA+GGG | - | chr3_2:26407106-26407125 | Msa0401230:intron | 50.0% |
| GTTCCTGCTGTTAGCAAGGA+TGG | - | chr3_2:26407135-26407154 | Msa0401230:intron | 50.0% | |
| GAAGAGTGACCATGGGAAAG+TGG | + | chr3_2:26407184-26407203 | None:intergenic | 50.0% | |
| TCACTAAATCTCCCAGGCGA+AGG | - | chr3_2:26407202-26407221 | Msa0401230:intron | 50.0% | |
| TAATAGCGCGAGTAGTTCGC+TGG | + | chr3_2:26407260-26407279 | None:intergenic | 50.0% | |
| !! | TCGAGTTGGCCCTGAGAATT+AGG | - | chr3_2:26407660-26407679 | Msa0401230:intron | 50.0% |
| ! | GATACGTGTACTGTGCTGGT+AGG | - | chr3_2:26407988-26408007 | Msa0401230:intron | 50.0% |
| !! | CTCAACTGGTGGATTCCTGA+TGG | - | chr3_2:26408107-26408126 | Msa0401230:intron | 50.0% |
| TGGGTACAGTTGGACAGAGT+TGG | + | chr3_2:26408133-26408152 | None:intergenic | 50.0% | |
| ! | AGGCCGATTCCAGCAACAAT+CGG | - | chr3_2:26408342-26408361 | Msa0401230:CDS | 50.0% |
| AGTTGGCCCCTACCATATGT+TGG | - | chr3_2:26409582-26409601 | Msa0401230:intron | 50.0% | |
| AGGTCTACAGTTGGATCAGC+AGG | + | chr3_2:26409845-26409864 | None:intergenic | 50.0% | |
| TCTGGATAAGTGACCAGAGC+TGG | + | chr3_2:26411278-26411297 | None:intergenic | 50.0% | |
| TAGGACTAGGCTCCTACTGT+TGG | - | chr3_2:26411498-26411517 | Msa0401230:exon | 50.0% | |
| CTAGGCTCCTACTGTTGGTA+AGG | - | chr3_2:26411503-26411522 | Msa0401230:exon | 50.0% | |
| GTGCCATCGAGAGAAGCTTC+TGG | + | chr3_2:26406379-26406398 | None:intergenic | 55.0% | |
| ! | AGTCGCCAGAGCTGATTTCC+GGG | + | chr3_2:26406471-26406490 | None:intergenic | 55.0% |
| ! | CAGTCGCCAGAGCTGATTTC+CGG | + | chr3_2:26406472-26406491 | None:intergenic | 55.0% |
| ! | AAATCAGCTCTGGCGACTGG+AGG | - | chr3_2:26406473-26406492 | Msa0401230:intron | 55.0% |
| ! | CTGGTGTTGAGTGCAGCAAC+AGG | - | chr3_2:26407072-26407091 | Msa0401230:intron | 55.0% |
| GTGCAGCAACAGGTAGAGGA+TGG | - | chr3_2:26407082-26407101 | Msa0401230:intron | 55.0% | |
| TGGCCATCCTTGCTAACAGC+AGG | + | chr3_2:26407141-26407160 | None:intergenic | 55.0% | |
| GCAATGAGCATCCTTCGCCT+GGG | + | chr3_2:26407216-26407235 | None:intergenic | 55.0% | |
| AGCAATGAGCATCCTTCGCC+TGG | + | chr3_2:26407217-26407236 | None:intergenic | 55.0% | |
| AGTAGTTCGCTGGCCACACA+TGG | + | chr3_2:26407250-26407269 | None:intergenic | 55.0% | |
| GTGCCATCGGTGTAAGCATG+AGG | + | chr3_2:26407285-26407304 | None:intergenic | 55.0% | |
| ! | GTCATGGTGGAGCAAGACAC+GGG | + | chr3_2:26408081-26408100 | None:intergenic | 55.0% |
| ! | GGTCATGGTGGAGCAAGACA+CGG | + | chr3_2:26408082-26408101 | None:intergenic | 55.0% |
| GTTGGACAGAGTTGGCCATC+AGG | + | chr3_2:26408125-26408144 | None:intergenic | 55.0% | |
| ACAGTGAGAGATCGGCGAAG+AGG | - | chr3_2:26408423-26408442 | Msa0401230:intron | 55.0% | |
| TCAAGGGCCGTGTCCCAAAA+AGG | + | chr3_2:26408861-26408880 | None:intergenic | 55.0% | |
| GACAGGACAAAATTGGCGCG+TGG | - | chr3_2:26410557-26410576 | Msa0401230:intron | 55.0% | |
| TTGGCGCGTGGTCTACTTTC+TGG | - | chr3_2:26410569-26410588 | Msa0401230:intron | 55.0% | |
| TGGCGCGTGGTCTACTTTCT+GGG | - | chr3_2:26410570-26410589 | Msa0401230:intron | 55.0% | |
| GGATCACGACAAACCAGCTC+TGG | - | chr3_2:26411262-26411281 | Msa0401230:CDS | 55.0% | |
| GGACTTGCGAGCAGTCTGCT+TGG | + | chr3_2:26406405-26406424 | None:intergenic | 60.0% | |
| CAGACTGCTCGCAAGTCCAC+CGG | - | chr3_2:26406407-26406426 | Msa0401230:intron | 60.0% | |
| !! | TTTGGTGGCGAGCTGCTTCC+GGG | + | chr3_2:26406444-26406463 | None:intergenic | 60.0% |
| !! | CTTTGGTGGCGAGCTGCTTC+CGG | + | chr3_2:26406445-26406464 | None:intergenic | 60.0% |
| ! | TGATTTCCGGGCGGCTTTGG+TGG | + | chr3_2:26406459-26406478 | None:intergenic | 60.0% |
| ! | AGCTGATTTCCGGGCGGCTT+TGG | + | chr3_2:26406462-26406481 | None:intergenic | 60.0% |
| ! | CGGAAATCAGCTCTGGCGAC+TGG | - | chr3_2:26406470-26406489 | Msa0401230:intron | 60.0% |
| TGGGATCAGGATGCGGCGAT+GGG | - | chr3_2:26407048-26407067 | Msa0401230:intron | 60.0% | |
| ACTGCTCGCAAGTCCACCGG+CGG | - | chr3_2:26406410-26406429 | Msa0401230:intron | 65.0% | |
| !! | TTGGTGGCGAGCTGCTTCCG+GGG | + | chr3_2:26406443-26406462 | None:intergenic | 65.0% |
| AGCCGCCCGGAAATCAGCTC+TGG | - | chr3_2:26406463-26406482 | Msa0401230:intron | 65.0% | |
| ! | CGCCAGAGCTGATTTCCGGG+CGG | + | chr3_2:26406468-26406487 | None:intergenic | 65.0% |
| GAGCGGAAACGGCACTGCTC+TGG | + | chr3_2:26406649-26406668 | None:intergenic | 65.0% | |
| GTGGGATCAGGATGCGGCGA+TGG | - | chr3_2:26407047-26407066 | Msa0401230:intron | 65.0% | |
| GGGATCAGGATGCGGCGATG+GGG | - | chr3_2:26407049-26407068 | Msa0401230:intron | 65.0% | |
| TCGCAAGTCCACCGGCGGCA+AGG | - | chr3_2:26406415-26406434 | Msa0401230:intron | 70.0% | |
| AGCTCGCCACCAAAGCCGCC+CGG | - | chr3_2:26406450-26406469 | Msa0401230:intron | 70.0% | |
| TCAGGATGCGGCGATGGGGC+TGG | - | chr3_2:26407053-26407072 | Msa0401230:intron | 70.0% | |
| CTTCCGGGGAGCCTTGCCGC+CGG | + | chr3_2:26406429-26406448 | None:intergenic | 75.0% | |
| ! | CCACCGGCGGCAAGGCTCCC+CGG | - | chr3_2:26406423-26406442 | Msa0401230:intron | 80.0% |
| ! | CCGGGGAGCCTTGCCGCCGG+TGG | + | chr3_2:26406426-26406445 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 26406106 | 26411799 | 26406106 | ID=Msa0401230;Name=Msa0401230 |
| chr3_2 | mRNA | 26406106 | 26411799 | 26406106 | ID=Msa0401230-mRNA-1;Parent=Msa0401230;Name=Msa0401230-mRNA-1;_AED=0.25;_eAED=0.25;_QI=286|0.77|0.9|1|0.88|0.8|10|379|375 |
| chr3_2 | exon | 26406106 | 26406404 | 26406106 | ID=Msa0401230-mRNA-1:exon:5558;Parent=Msa0401230-mRNA-1 |
| chr3_2 | exon | 26406594 | 26406733 | 26406594 | ID=Msa0401230-mRNA-1:exon:5557;Parent=Msa0401230-mRNA-1 |
| chr3_2 | exon | 26407289 | 26407343 | 26407289 | ID=Msa0401230-mRNA-1:exon:5556;Parent=Msa0401230-mRNA-1 |
| chr3_2 | exon | 26408029 | 26408106 | 26408029 | ID=Msa0401230-mRNA-1:exon:5555;Parent=Msa0401230-mRNA-1 |
| chr3_2 | exon | 26408188 | 26408244 | 26408188 | ID=Msa0401230-mRNA-1:exon:5554;Parent=Msa0401230-mRNA-1 |
| chr3_2 | exon | 26408329 | 26408435 | 26408329 | ID=Msa0401230-mRNA-1:exon:5553;Parent=Msa0401230-mRNA-1 |
| chr3_2 | exon | 26409189 | 26409288 | 26409189 | ID=Msa0401230-mRNA-1:exon:5552;Parent=Msa0401230-mRNA-1 |
| chr3_2 | exon | 26409500 | 26409561 | 26409500 | ID=Msa0401230-mRNA-1:exon:5551;Parent=Msa0401230-mRNA-1 |
| chr3_2 | exon | 26410588 | 26410848 | 26410588 | ID=Msa0401230-mRNA-1:exon:5550;Parent=Msa0401230-mRNA-1 |
| chr3_2 | exon | 26411166 | 26411799 | 26411166 | ID=Msa0401230-mRNA-1:exon:5549;Parent=Msa0401230-mRNA-1 |
| chr3_2 | five_prime_UTR | 26411514 | 26411799 | 26411514 | ID=Msa0401230-mRNA-1:five_prime_utr;Parent=Msa0401230-mRNA-1 |
| chr3_2 | CDS | 26411166 | 26411513 | 26411166 | ID=Msa0401230-mRNA-1:cds;Parent=Msa0401230-mRNA-1 |
| chr3_2 | CDS | 26410588 | 26410848 | 26410588 | ID=Msa0401230-mRNA-1:cds;Parent=Msa0401230-mRNA-1 |
| chr3_2 | CDS | 26409500 | 26409561 | 26409500 | ID=Msa0401230-mRNA-1:cds;Parent=Msa0401230-mRNA-1 |
| chr3_2 | CDS | 26409189 | 26409288 | 26409189 | ID=Msa0401230-mRNA-1:cds;Parent=Msa0401230-mRNA-1 |
| chr3_2 | CDS | 26408329 | 26408435 | 26408329 | ID=Msa0401230-mRNA-1:cds;Parent=Msa0401230-mRNA-1 |
| chr3_2 | CDS | 26408188 | 26408244 | 26408188 | ID=Msa0401230-mRNA-1:cds;Parent=Msa0401230-mRNA-1 |
| chr3_2 | CDS | 26408029 | 26408106 | 26408029 | ID=Msa0401230-mRNA-1:cds;Parent=Msa0401230-mRNA-1 |
| chr3_2 | CDS | 26407289 | 26407343 | 26407289 | ID=Msa0401230-mRNA-1:cds;Parent=Msa0401230-mRNA-1 |
| chr3_2 | CDS | 26406674 | 26406733 | 26406674 | ID=Msa0401230-mRNA-1:cds;Parent=Msa0401230-mRNA-1 |
| chr3_2 | three_prime_UTR | 26406594 | 26406673 | 26406594 | ID=Msa0401230-mRNA-1:three_prime_utr;Parent=Msa0401230-mRNA-1 |
| chr3_2 | three_prime_UTR | 26406106 | 26406404 | 26406106 | ID=Msa0401230-mRNA-1:three_prime_utr;Parent=Msa0401230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
