AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0404730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0404730 MtrunA17_Chr3g0095031 90.609 394 4 1 1 361 165 558 0.0 710
Msa0404730 MtrunA17_Chr5g0442191 72.368 304 51 1 1 271 156 459 4.90e-158 456
Msa0404730 MtrunA17_Chr7g0271121 61.333 300 83 1 2 268 184 483 2.53e-120 364
Msa0404730 MtrunA17_Chr1g0193491 57.045 291 92 1 2 259 193 483 1.11e-111 339
Msa0404730 MtrunA17_Chr1g0204391 42.809 299 129 6 2 262 140 434 2.19e-66 219
Msa0404730 MtrunA17_Chr6g0475251 41.554 296 131 6 2 259 183 474 6.46e-63 213
Msa0404730 MtrunA17_Chr3g0107851 38.462 325 148 5 1 282 191 506 6.11e-61 205
Msa0404730 MtrunA17_Chr1g0176041 36.257 342 172 6 1 296 233 574 9.54e-61 205
Msa0404730 MtrunA17_Chr3g0121351 38.176 296 139 6 1 252 225 520 4.12e-59 201
Msa0404730 MtrunA17_Chr4g0076491 39.062 320 134 6 2 271 365 673 7.57e-58 199
Msa0404730 MtrunA17_Chr6g0449741 38.871 319 134 6 2 271 327 633 1.52e-57 197
Msa0404730 MtrunA17_Chr4g0063551 36.047 344 173 6 2 298 226 569 2.18e-57 197
Msa0404730 MtrunA17_Chr2g0277821 38.163 283 138 4 1 246 578 860 1.65e-55 196
Msa0404730 MtrunA17_Chr5g0409981 39.051 274 129 5 1 236 179 452 2.91e-55 189
Msa0404730 MtrunA17_Chr2g0299681 37.838 296 150 4 2 263 111 406 4.95e-55 186
Msa0404730 MtrunA17_Chr6g0449911 37.407 270 132 4 3 236 240 508 4.11e-54 189
Msa0404730 MtrunA17_Chr2g0330401 35.588 340 167 9 1 301 170 496 7.03e-54 185
Msa0404730 MtrunA17_Chr8g0342861 36.364 308 157 5 2 275 111 413 8.40e-53 180
Msa0404730 MtrunA17_Chr2g0329931 36.688 308 156 5 2 275 111 413 9.64e-53 179
Msa0404730 MtrunA17_Chr4g0070981 36.213 301 158 4 2 268 111 411 1.12e-51 177
Msa0404730 MtrunA17_Chr2g0293631 38.182 275 135 3 3 242 571 845 1.72e-51 184
Msa0404730 MtrunA17_Chr7g0236841 33.242 364 193 8 1 322 81 436 2.27e-51 177
Msa0404730 MtrunA17_Chr2g0297261 34.459 296 160 4 2 263 104 399 6.01e-51 175
Msa0404730 MtrunA17_Chr6g0483491 34.431 334 173 7 1 292 81 410 6.03e-51 176
Msa0404730 MtrunA17_Chr1g0200181 36.299 281 141 7 3 245 224 504 2.45e-50 177
Msa0404730 MtrunA17_Chr7g0247181 34.014 294 162 5 2 263 210 503 2.15e-49 173
Msa0404730 MtrunA17_Chr7g0247221 34.014 294 162 5 2 263 213 506 3.75e-49 172
Msa0404730 MtrunA17_Chr7g0270131 35.461 282 146 4 1 246 306 587 4.00e-49 176
Msa0404730 MtrunA17_Chr1g0157691 35.231 281 144 7 3 245 226 506 5.33e-49 173
Msa0404730 MtrunA17_Chr7g0247191 33.673 294 163 5 2 263 220 513 6.14e-49 172
Msa0404730 MtrunA17_Chr2g0300291 36.271 295 150 5 3 259 215 509 2.91e-48 173
Msa0404730 MtrunA17_Chr3g0098121 36.735 294 149 5 3 259 226 519 9.20e-48 172
Msa0404730 MtrunA17_Chr2g0310581 35.959 292 146 5 1 252 122 412 4.72e-42 153
Msa0404730 MtrunA17_Chr4g0040761 33.333 270 144 5 3 236 92 361 1.81e-39 149
Msa0404730 MtrunA17_Chr1g0149251 31.159 276 147 7 2 237 34 306 3.11e-38 139
Msa0404730 MtrunA17_Chr3g0114081 31.186 295 144 6 1 238 90 382 8.27e-38 142
Msa0404730 MtrunA17_Chr4g0003441 30.263 304 168 8 2 264 178 478 5.73e-37 139
Msa0404730 MtrunA17_Chr4g0058591 34.043 235 120 4 1 200 276 510 1.30e-36 139
Msa0404730 MtrunA17_Chr6g0461751 32.624 282 152 7 1 245 216 496 2.84e-34 132
Msa0404730 MtrunA17_Chr8g0347161 32.517 286 144 8 1 239 179 462 1.27e-32 128
Msa0404730 MtrunA17_Chr6g0466611 31.900 279 143 7 2 234 221 498 1.61e-32 128
Msa0404730 MtrunA17_Chr4g0062301 30.000 280 150 7 2 238 171 447 2.20e-32 127
Msa0404730 MtrunA17_Chr2g0307471 30.466 279 149 7 2 238 165 440 1.13e-31 125
Msa0404730 MtrunA17_Chr8g0347171 31.818 286 146 8 1 239 237 520 1.22e-30 122
Msa0404730 MtrunA17_Chr2g0309551 26.901 342 168 8 2 261 195 536 1.84e-30 122
Msa0404730 MtrunA17_Chr8g0386451 30.035 283 153 6 2 239 366 648 2.61e-30 122
Msa0404730 MtrunA17_Chr8g0347151 30.634 284 152 8 1 239 278 561 3.07e-30 122
Msa0404730 MtrunA17_Chr7g0263771 28.758 306 173 9 2 268 204 503 5.18e-30 120
Msa0404730 MtrunA17_Chr1g0169331 27.928 333 167 9 2 263 61 391 1.96e-29 117
Msa0404730 MtrunA17_Chr5g0429221 28.188 298 176 6 1 263 76 370 1.25e-24 103
Msa0404730 MtrunA17_Chr8g0342851 28.814 295 152 7 2 263 43 312 1.24e-23 99.8
Msa0404730 MtrunA17_Chr4g0062321 28.390 236 125 6 8 205 4 233 3.26e-22 94.4
Msa0404730 MtrunA17_Chr5g0443991 28.571 280 153 10 2 238 150 425 5.48e-22 97.4
Msa0404730 MtrunA17_Chr1g0155201 27.711 249 147 8 37 259 1 242 9.14e-22 95.1
Msa0404730 MtrunA17_Chr1g0179761 25.893 336 170 11 2 268 153 478 1.04e-21 96.3
Msa0404730 MtrunA17_Chr3g0145781 27.010 311 168 9 3 254 212 522 1.50e-19 90.1
Msa0404730 MtrunA17_Chr3g0137891 37.984 129 75 3 2 125 34 162 4.07e-19 85.1
Msa0404730 MtrunA17_Chr7g0236831 42.574 101 57 1 138 237 476 576 1.80e-18 87.0
Msa0404730 MtrunA17_Chr7g0236831 35.000 140 62 3 2 112 255 394 7.05e-16 79.3
Msa0404730 MtrunA17_Chr4g0039471 39.844 128 72 2 1 123 292 419 6.08e-18 84.7
Msa0404730 MtrunA17_Chr8g0354761 22.759 290 175 9 1 246 81 365 1.22e-16 80.9
Msa0404730 MtrunA17_Chr3g0137901 33.333 117 71 2 125 237 29 142 2.92e-16 75.9
Msa0404730 MtrunA17_Chr4g0004301 35.537 121 66 3 139 251 335 451 6.85e-15 75.9
Msa0404730 MtrunA17_Chr4g0029191 30.968 155 85 4 1 133 120 274 1.20e-14 75.1
Msa0404730 MtrunA17_Chr4g0029191 34.314 102 66 1 166 267 391 491 6.96e-14 72.8
Msa0404730 MtrunA17_Chr5g0434301 35.537 121 66 3 139 251 335 451 2.80e-14 73.9
Msa0404730 MtrunA17_Chr2g0301281 30.323 155 86 4 1 133 117 271 3.02e-14 73.9
Msa0404730 MtrunA17_Chr2g0301281 32.000 125 80 3 143 267 369 488 3.13e-14 73.9
Msa0404730 MtrunA17_Chr4g0025141 27.014 211 107 6 104 267 15 225 2.03e-13 69.3
Msa0404730 MtrunA17_Chr4g0025101 28.934 197 103 7 97 269 20 203 2.09e-13 68.9
Msa0404730 MtrunA17_Chr8g0364251 32.653 147 94 5 110 253 407 551 2.46e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0404730 AT3G22330.1 67.208 308 68 1 1 275 180 487 1.50e-150 438
Msa0404730 AT3G22310.2 66.124 307 71 1 2 275 193 499 2.71e-146 426
Msa0404730 AT3G22310.1 66.124 307 71 1 2 275 193 499 4.30e-146 426
Msa0404730 AT5G26742.3 57.812 320 99 3 3 286 91 410 4.15e-119 359
Msa0404730 AT5G26742.1 57.812 320 99 3 3 286 184 503 3.07e-118 359
Msa0404730 AT5G26742.2 57.812 320 99 3 3 286 184 503 3.14e-118 359
Msa0404730 AT5G62190.1 43.854 301 123 8 2 262 177 471 4.40e-63 213
Msa0404730 AT1G20920.2 38.869 283 136 4 1 246 266 548 5.29e-58 201
Msa0404730 AT1G20920.4 38.869 283 136 4 1 246 604 886 1.02e-57 202
Msa0404730 AT1G20920.6 38.869 283 136 4 1 246 604 886 1.02e-57 202
Msa0404730 AT1G20920.3 38.869 283 136 4 1 246 604 886 1.02e-57 202
Msa0404730 AT1G20920.7 38.869 283 136 4 1 246 604 886 1.02e-57 202
Msa0404730 AT1G20920.5 38.869 283 136 4 1 246 604 886 1.02e-57 202
Msa0404730 AT1G20920.1 38.869 283 136 4 1 246 604 886 1.02e-57 202
Msa0404730 AT5G14610.7 38.889 270 128 4 3 236 106 374 1.72e-57 195
Msa0404730 AT5G14610.3 38.889 270 128 4 3 236 106 374 1.72e-57 195
Msa0404730 AT5G14610.6 38.889 270 128 4 3 236 237 505 2.28e-57 197
Msa0404730 AT5G14610.2 38.889 270 128 4 3 236 237 505 2.46e-57 197
Msa0404730 AT5G14610.5 38.889 270 128 4 3 236 245 513 2.59e-57 197
Msa0404730 AT3G58570.1 36.250 320 160 5 1 276 226 545 4.45e-57 196
Msa0404730 AT3G58510.1 35.329 334 174 6 1 292 231 564 4.50e-57 196
Msa0404730 AT3G58510.3 35.329 334 174 6 1 292 231 564 4.50e-57 196
Msa0404730 AT3G58510.2 35.329 334 174 6 1 292 231 564 4.50e-57 196
Msa0404730 AT5G14610.1 38.889 270 128 4 3 236 305 573 8.00e-57 197
Msa0404730 AT3G01540.4 37.500 280 138 4 3 246 234 512 1.65e-56 194
Msa0404730 AT3G01540.2 37.500 280 138 4 3 246 234 512 1.65e-56 194
Msa0404730 AT3G01540.3 37.500 280 138 4 3 246 234 512 1.65e-56 194
Msa0404730 AT3G01540.1 37.500 280 138 4 3 246 234 512 1.94e-56 194
Msa0404730 AT2G33730.1 40.000 285 121 5 2 236 392 676 1.83e-55 193
Msa0404730 AT2G42520.2 35.312 320 163 6 1 276 239 558 9.83e-55 190
Msa0404730 AT2G42520.1 35.312 320 163 6 1 276 239 558 9.83e-55 190
Msa0404730 AT2G42520.3 35.312 320 163 6 1 276 239 558 9.83e-55 190
Msa0404730 AT1G72730.1 37.662 308 153 5 2 275 112 414 1.36e-54 185
Msa0404730 AT1G31970.1 41.392 273 122 6 2 236 194 466 5.05e-54 186
Msa0404730 AT1G55150.1 34.940 332 164 6 1 291 174 494 6.11e-54 185
Msa0404730 AT1G51380.1 36.149 296 155 4 2 263 93 388 1.38e-53 182
Msa0404730 AT5G63120.2 35.943 281 145 3 1 246 240 520 1.50e-53 186
Msa0404730 AT1G55150.2 34.940 332 164 6 1 291 199 519 2.10e-53 184
Msa0404730 AT3G13920.3 36.364 308 157 5 2 275 100 402 8.55e-53 180
Msa0404730 AT3G13920.4 36.364 308 157 5 2 275 105 407 8.63e-53 180
Msa0404730 AT3G13920.1 36.364 308 157 5 2 275 110 412 8.71e-53 180
Msa0404730 AT3G19760.1 34.459 296 160 4 2 263 106 401 2.12e-52 179
Msa0404730 AT3G13920.2 37.634 279 140 4 2 246 110 388 2.87e-51 176
Msa0404730 AT3G13920.5 37.634 279 140 4 2 246 114 392 3.03e-51 176
Msa0404730 AT1G54270.2 35.714 308 159 5 2 275 105 407 8.85e-51 175
Msa0404730 AT1G54270.1 35.714 308 159 5 2 275 110 412 9.09e-51 175
Msa0404730 AT2G47330.1 37.234 282 141 5 1 246 303 584 1.29e-50 180
Msa0404730 AT3G06480.1 36.364 275 140 2 3 242 511 785 2.80e-50 181
Msa0404730 AT3G09620.2 37.358 265 136 6 1 246 472 725 5.55e-50 180
Msa0404730 AT3G09620.1 37.358 265 136 6 1 246 471 724 5.65e-50 180
Msa0404730 AT1G28180.1 37.828 267 134 4 2 236 52 318 2.44e-49 170
Msa0404730 AT5G60990.1 33.918 342 182 8 1 301 91 429 4.95e-49 171
Msa0404730 AT1G16280.1 38.944 303 136 9 1 259 128 425 2.05e-48 170
Msa0404730 AT5G51280.1 34.982 283 146 5 1 245 224 506 3.70e-48 171
Msa0404730 AT4G16630.1 36.054 294 151 4 3 259 242 535 4.67e-48 174
Msa0404730 AT2G45810.1 34.680 297 160 7 2 265 225 520 6.02e-48 170
Msa0404730 AT4G33370.1 34.982 283 146 6 1 245 175 457 4.93e-47 167
Msa0404730 AT4G00660.1 32.993 294 165 5 2 263 202 495 9.01e-47 166
Msa0404730 AT4G00660.2 32.993 294 165 5 2 263 202 495 9.01e-47 166
Msa0404730 AT3G61240.2 33.898 295 161 7 2 263 195 488 1.17e-46 166
Msa0404730 AT3G61240.1 33.898 295 161 7 2 263 195 488 1.17e-46 166
Msa0404730 AT5G14610.4 36.398 261 124 6 3 227 245 499 5.46e-45 161
Msa0404730 AT1G77030.1 33.210 271 145 5 2 236 101 371 4.25e-40 151
Msa0404730 AT3G06480.2 34.156 243 123 3 3 209 511 752 1.19e-39 149
Msa0404730 AT1G71370.1 31.429 280 150 6 1 238 92 371 5.89e-39 146
Msa0404730 AT5G05450.1 31.142 289 148 7 1 238 92 380 2.54e-38 144
Msa0404730 AT5G63120.3 34.855 241 122 3 1 206 240 480 5.19e-38 142
Msa0404730 AT5G63120.4 34.855 241 122 3 1 206 240 480 5.19e-38 142
Msa0404730 AT5G63120.5 34.855 241 122 3 1 206 240 480 5.19e-38 142
Msa0404730 AT5G63120.1 34.894 235 118 3 1 200 240 474 5.67e-38 142
Msa0404730 AT5G11170.2 30.263 304 168 8 2 264 34 334 1.96e-37 138
Msa0404730 AT5G11170.1 30.263 304 168 8 2 264 117 417 3.15e-37 139
Msa0404730 AT5G11200.1 30.263 304 168 8 2 264 117 417 3.15e-37 139
Msa0404730 AT3G18600.1 32.852 277 145 7 2 239 164 438 8.14e-37 140
Msa0404730 AT5G65900.1 31.834 289 157 8 2 251 229 516 2.48e-35 136
Msa0404730 AT3G02065.1 32.258 279 152 7 1 243 51 328 7.34e-35 131
Msa0404730 AT3G02065.3 32.258 279 152 7 1 243 188 465 6.64e-34 131
Msa0404730 AT3G02065.2 32.258 279 152 7 1 243 188 465 6.64e-34 131
Msa0404730 AT5G08610.1 30.189 318 168 10 1 269 460 772 3.39e-33 131
Msa0404730 AT5G63630.2 29.618 314 175 7 1 269 326 638 4.54e-33 130
Msa0404730 AT5G63630.1 29.618 314 175 7 1 269 132 444 3.29e-32 127
Msa0404730 AT5G08620.1 29.560 318 170 8 1 269 158 470 1.66e-30 122
Msa0404730 AT4G09730.1 30.935 278 145 7 3 234 193 469 7.51e-30 120
Msa0404730 AT1G12770.2 28.190 337 163 8 2 259 194 530 9.27e-30 120
Msa0404730 AT1G12770.1 28.190 337 163 8 2 259 194 530 9.27e-30 120
Msa0404730 AT3G09720.2 26.510 298 180 6 2 263 213 507 3.16e-29 118
Msa0404730 AT3G09720.1 26.510 298 180 6 2 263 213 507 3.16e-29 118
Msa0404730 AT1G63250.1 30.903 288 146 9 1 239 407 690 3.82e-29 119
Msa0404730 AT2G07750.1 30.526 285 151 8 1 239 454 737 4.68e-28 116
Msa0404730 AT1G51380.2 41.985 131 74 1 2 130 93 223 8.05e-25 102
Msa0404730 AT1G71280.2 30.942 223 130 5 1 204 93 310 1.02e-24 103
Msa0404730 AT1G51380.4 41.985 131 74 1 2 130 93 223 1.97e-24 102
Msa0404730 AT1G51380.3 41.985 131 74 1 2 130 93 223 2.88e-24 101
Msa0404730 AT1G71280.1 30.804 224 131 5 1 205 93 311 4.05e-24 103
Msa0404730 AT3G53110.1 27.915 283 152 9 2 234 165 445 7.93e-23 99.8
Msa0404730 AT4G15850.1 31.757 148 94 2 132 272 330 477 4.39e-18 85.9
Msa0404730 AT5G11200.3 37.209 129 76 3 2 125 117 245 2.42e-17 83.6
Msa0404730 AT5G11200.3 28.966 145 95 3 125 264 317 458 2.25e-14 74.7
Msa0404730 AT5G11200.2 37.121 132 78 3 2 128 117 248 2.53e-17 83.6
Msa0404730 AT5G11200.2 28.966 145 95 3 125 264 335 476 2.86e-14 74.3
Msa0404730 AT3G16840.1 35.000 140 62 3 2 112 282 421 3.70e-16 80.5
Msa0404730 AT3G16840.1 34.783 115 74 1 138 251 503 617 1.24e-15 79.0
Msa0404730 AT3G16840.2 35.000 140 62 3 2 112 283 422 3.70e-16 80.5
Msa0404730 AT3G16840.2 34.783 115 74 1 138 251 504 618 1.21e-15 79.0
Msa0404730 AT2G40700.1 37.615 109 65 2 161 267 373 480 5.83e-15 76.6
Msa0404730 AT2G40700.1 30.128 156 89 3 1 136 107 262 3.61e-14 74.3
Msa0404730 AT1G59990.2 35.593 118 74 2 139 255 426 542 3.35e-13 71.2
Msa0404730 AT1G59990.1 35.593 118 74 2 139 255 426 542 4.01e-13 70.9

Find 146 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAAATAATTAGTCTTTA+TGG 0.084893 3_2:-37231920 Msa0404730:CDS
ACAAATATCTCTGAATTATT+TGG 0.134715 3_2:+37229425 None:intergenic
GGCTGTGACTTAGCTGCTTT+TGG 0.161327 3_2:-37227650 Msa0404730:three_prime_UTR
GGAACTGTTTATTGAGAAAA+TGG 0.218184 3_2:-37226934 Msa0404730:three_prime_UTR
CTTTCCTATGGATGGAATTC+AGG 0.226333 3_2:+37227376 None:intergenic
AAACAGCTATTTCAATGTTT+TGG 0.259542 3_2:-37230195 Msa0404730:CDS
TTGCTAATTTGTTGCTGAAT+AGG 0.267190 3_2:+37231890 None:intergenic
AGACTAATTATTTCCAAGTT+AGG 0.275152 3_2:+37231926 None:intergenic
TGGAAATAATTAGTCTTTAT+GGG 0.279985 3_2:-37231919 Msa0404730:CDS
TAATCTACCACGCAGTTTCT+AGG 0.280539 3_2:+37227288 None:intergenic
TATGGGAAATCCAGTGGTTT+TGG 0.292126 3_2:-37227849 Msa0404730:CDS
GCACTTACCAGGAGTTAAAA+TGG 0.294440 3_2:+37227590 None:intergenic
ACGCCATCTTCACTTCTTGA+TGG 0.301046 3_2:-37227567 Msa0404730:three_prime_UTR
TCTCGGCAACAATGCCTTCT+TGG 0.303539 3_2:-37231673 Msa0404730:CDS
TGGATTTCCCATAGCCATTT+CGG 0.310094 3_2:+37227859 None:intergenic
ACTTCTTGATGGTTTAAGTT+TGG 0.311291 3_2:-37227556 Msa0404730:three_prime_UTR
GAGATATTTGTTCATCGATC+TGG 0.318649 3_2:-37229413 Msa0404730:CDS
ACCGGGTGTGCCTTCGGCCT+TGG 0.330410 3_2:-37227250 Msa0404730:three_prime_UTR
AGAAACTGCGTGGTAGATTA+TGG 0.339751 3_2:-37227285 Msa0404730:three_prime_UTR
CTCAATTGTCTTTACATCCC+TGG 0.345874 3_2:+37229331 None:intergenic
GTTGTTACACCTCGTTATAT+AGG 0.347365 3_2:-37227099 Msa0404730:three_prime_UTR
AAGTTTAGCTCAGGTAAATC+TGG 0.349135 3_2:-37227717 Msa0404730:CDS
AATCCCCTTATCACTTGATA+TGG 0.353686 3_2:-37227476 Msa0404730:three_prime_UTR
AATAGCAGTTCCTTTCTTAC+CGG 0.354230 3_2:+37229376 None:intergenic
TTGTTACACCTCGTTATATA+GGG 0.355298 3_2:-37227098 Msa0404730:three_prime_UTR
CAGAGAGAAAGAACTCTTAC+TGG 0.358585 3_2:-37230224 Msa0404730:CDS
CGTCGATCAAGTAGTAGTTC+TGG 0.364601 3_2:-37227888 Msa0404730:CDS
TGATCGTCTATCACATATAA+TGG 0.364977 3_2:-37230294 Msa0404730:CDS
TCAAGTCGTTCCAGTGGCTT+TGG 0.365127 3_2:-37227741 Msa0404730:CDS
GCCTTGGATCTCCTAGGTTC+TGG 0.365170 3_2:+37227670 None:intergenic
CTGGGTGGGTTGTGTTGGAT+TGG 0.372168 3_2:-37226996 Msa0404730:three_prime_UTR
ATATCACCATTGCTATATAA+AGG 0.374630 3_2:+37227211 None:intergenic
AAGAAGGGATCCTTTGGCTT+TGG 0.386008 3_2:-37232008 None:intergenic
ATAAGAGTTTGACGCTTAGA+AGG 0.390311 3_2:+37231698 None:intergenic
CTTACAAGATCAATTGTTAA+GGG 0.390668 3_2:+37231617 None:intergenic
GCGTCAAACTCTTATGTTCT+CGG 0.392179 3_2:-37231690 Msa0404730:CDS
AGTGGTCGATATGGCTCTTC+GGG 0.396708 3_2:-37227921 Msa0404730:CDS
CAGCAACAAATTAGCAAACT+TGG 0.398443 3_2:-37231884 Msa0404730:CDS
CAATGGTGATATGTTTCATT+TGG 0.403487 3_2:-37227200 Msa0404730:three_prime_UTR
AACTTGTCGTGCAAGTTCTC+TGG 0.403791 3_2:+37231973 None:intergenic
CAAGGACGCTGCACCTAACT+TGG 0.406366 3_2:-37231939 Msa0404730:CDS
TCCTTGTGAGATGATCTTCA+TGG 0.407159 3_2:+37226954 None:intergenic
GATATTGTAGTTGGCACGCC+TGG 0.410806 3_2:-37231851 Msa0404730:CDS
ACTTACAAGATCAATTGTTA+AGG 0.411746 3_2:+37231616 None:intergenic
GGCTTTGGAAAGTTTAGCTC+AGG 0.415998 3_2:-37227726 Msa0404730:CDS
TTTCTCCATATCAAGTGATA+AGG 0.416224 3_2:+37227471 None:intergenic
TTCTCCATATCAAGTGATAA+GGG 0.422298 3_2:+37227472 None:intergenic
TATCAAGTGATAAGGGGATT+AGG 0.423206 3_2:+37227479 None:intergenic
TGTTCCTTGAAGTATGTAAT+GGG 0.424034 3_2:-37227173 Msa0404730:three_prime_UTR
GGATCTGGCCGAAATGGCTA+TGG 0.441031 3_2:-37227867 Msa0404730:CDS
TCAGGTAAATCTGGGAGATA+TGG 0.441756 3_2:-37227708 Msa0404730:CDS
CAATTGTTAAGGGTTTGTTT+AGG 0.442345 3_2:+37231627 None:intergenic
GTGTTATTGATCTTCTCAAA+AGG 0.443558 3_2:-37231826 Msa0404730:CDS
AGGTGTAACAACTATATTGC+GGG 0.444313 3_2:+37227110 None:intergenic
CCGAAGATTGCTGTTGAAAG+TGG 0.446685 3_2:-37227972 Msa0404730:CDS
GAATGATACATTCTGCTTTG+AGG 0.448716 3_2:-37227436 Msa0404730:three_prime_UTR
TAGTGGTCGATATGGCTCTT+CGG 0.449283 3_2:-37227922 Msa0404730:CDS
AGCACGAGTAGTGGTCGATA+TGG 0.449737 3_2:-37227930 Msa0404730:CDS
TTGTTCCTTGAAGTATGTAA+TGG 0.451449 3_2:-37227174 Msa0404730:three_prime_UTR
ACATGCACCGGGTGTGCCTT+CGG 0.454485 3_2:-37227256 Msa0404730:three_prime_UTR
CACTTACCAGGAGTTAAAAT+GGG 0.457426 3_2:+37227591 None:intergenic
AGTTCTGGATCTGGCCGAAA+TGG 0.458244 3_2:-37227873 Msa0404730:CDS
GGCTCTAGTTCAAGGAAGTC+AGG 0.459719 3_2:-37227825 Msa0404730:CDS
GTTCATCGATCTGGACGAAC+AGG 0.460090 3_2:-37229404 Msa0404730:CDS
GAACTTACAAGATCAACATT+TGG 0.460659 3_2:+37230137 None:intergenic
TTTATTGAGAAAATGGAAAC+CGG 0.461223 3_2:-37226927 Msa0404730:three_prime_UTR
ACATTCTGGGTGGGTTGTGT+TGG 0.462857 3_2:-37227001 Msa0404730:three_prime_UTR
TCTGCCCATTACATACTTCA+AGG 0.463013 3_2:+37227169 None:intergenic
AATAATAACAGTTAAAATAG+AGG 0.463106 3_2:-37227617 Msa0404730:three_prime_UTR
GCCAAGGCCGAAGGCACACC+CGG 0.463723 3_2:+37227249 None:intergenic
ACAGGACGTGCCGGTAAGAA+AGG 0.464924 3_2:-37229386 Msa0404730:CDS
CCACTTTCAACAGCAATCTT+CGG 0.468869 3_2:+37227972 None:intergenic
GCAACTGATGTTGCTTCTCG+TGG 0.472676 3_2:-37230170 Msa0404730:CDS
AGTGGATCAGCAGACATGTT+TGG 0.473943 3_2:-37227954 Msa0404730:CDS
TAGACGATCAGCATCACGTT+TGG 0.475355 3_2:+37230307 None:intergenic
TGTTATTGATCTTCTCAAAA+GGG 0.475497 3_2:-37231825 Msa0404730:CDS
CACTCCTACTCACTTTCCTA+TGG 0.475805 3_2:+37227364 None:intergenic
TCTGGTAAAACGGATAAATA+CGG 0.481870 3_2:-37227783 Msa0404730:CDS
GAAGATGGCGTGCACTTACC+AGG 0.485866 3_2:+37227579 None:intergenic
GGAAATAATTAGTCTTTATG+GGG 0.493886 3_2:-37231918 Msa0404730:CDS
TCAAGTAGTAGTTCTGGATC+TGG 0.495071 3_2:-37227882 Msa0404730:CDS
ACAAGTTGAAAAGGAATTCA+AGG 0.497144 3_2:-37231957 Msa0404730:CDS
TTCACACAGAAAATCAATCC+AGG 0.497254 3_2:-37229349 Msa0404730:CDS
AAAATATGCATCGTACGGGC+TGG 0.509032 3_2:+37227332 None:intergenic
GATATGGCTCTTCGGGAGGT+AGG 0.509220 3_2:-37227914 Msa0404730:CDS
ACGGATAAATACGGTGGTGG+AGG 0.516721 3_2:-37227774 Msa0404730:CDS
GAAAATATATCATTAATTCC+CGG 0.517443 3_2:+37227031 None:intergenic
TCGTTGTTTACATTCTGGGT+GGG 0.518793 3_2:-37227010 Msa0404730:three_prime_UTR
CCTACTCACTTTCCTATGGA+TGG 0.519773 3_2:+37227368 None:intergenic
GTAAGATTCTTTATCCAAGA+AGG 0.527112 3_2:+37231659 None:intergenic
ACTTGCACGACAAGTTGAAA+AGG 0.531541 3_2:-37231966 Msa0404730:CDS
CAACTGATGTTGCTTCTCGT+GGG 0.532954 3_2:-37230169 Msa0404730:CDS
ACTTGATATGGAGAAAGTTA+CGG 0.536080 3_2:-37227464 Msa0404730:three_prime_UTR
CTCTGATAGGAACATGCTAA+AGG 0.538109 3_2:-37230356 Msa0404730:intron
TTCGTTGTTTACATTCTGGG+TGG 0.546043 3_2:-37227011 Msa0404730:three_prime_UTR
TTATGGTTCTGAACATGCAC+CGG 0.549735 3_2:-37227268 Msa0404730:three_prime_UTR
TTCAAGATTGCCAAGGCCGA+AGG 0.553799 3_2:+37227240 None:intergenic
CAAATTAGCAAACTTGGTAG+TGG 0.556602 3_2:-37231878 Msa0404730:CDS
AGAAGATCAATAACACGTCC+AGG 0.558404 3_2:+37231833 None:intergenic
ATATGGCTCTTCGGGAGGTA+GGG 0.561990 3_2:-37227913 Msa0404730:CDS
AAGCAGCTAAGTCACAGCCT+TGG 0.564790 3_2:+37227654 None:intergenic
AAACCATCAAGAAGTGAAGA+TGG 0.565030 3_2:+37227564 None:intergenic
AGTTTAGCTCAGGTAAATCT+GGG 0.566547 3_2:-37227716 Msa0404730:CDS
GATCTGGCCGAAATGGCTAT+GGG 0.570071 3_2:-37227866 Msa0404730:CDS
TCATCCTGAATTCCATCCAT+AGG 0.573914 3_2:-37227380 Msa0404730:three_prime_UTR
AAGACAATTGAGAGAGACGT+TGG 0.577942 3_2:-37229320 Msa0404730:CDS
AGAAATTAAAGCCAGAACCT+AGG 0.580490 3_2:-37227681 Msa0404730:exon
AGTGGCGTAGATATTGTAGT+TGG 0.581207 3_2:-37231860 Msa0404730:CDS
GTTATTGATCTTCTCAAAAG+GGG 0.583997 3_2:-37231824 Msa0404730:CDS
TGTCGTGCAAGTTCTCTGGT+TGG 0.584435 3_2:+37231977 None:intergenic
ATTAAATGCGAGGCCTTGCA+TGG 0.587294 3_2:-37230263 Msa0404730:CDS
GCTAAACTTTCCAAAGCCAC+TGG 0.588118 3_2:+37227731 None:intergenic
GAGCAACCTTTATATAGCAA+TGG 0.589689 3_2:-37227217 Msa0404730:three_prime_UTR
AAGGGGCTCACTGAAACTGA+AGG 0.594694 3_2:-37231807 Msa0404730:CDS
CTAGTTCAAGGAAGTCAGGA+GGG 0.596259 3_2:-37227821 Msa0404730:CDS
AGCAGTTCAAGTCGTTCCAG+TGG 0.601225 3_2:-37227747 Msa0404730:CDS
ACTAGAGCCACCAAAACCAC+TGG 0.602513 3_2:+37227839 None:intergenic
GTCACAGCCTTGGATCTCCT+AGG 0.604311 3_2:+37227664 None:intergenic
TGATAGGAACATGCTAAAGG+AGG 0.604402 3_2:-37230353 Msa0404730:intron
TCTGGACGAACAGGACGTGC+CGG 0.607192 3_2:-37229395 Msa0404730:CDS
TCTCCATATCAAGTGATAAG+GGG 0.607836 3_2:+37227473 None:intergenic
TATGGTTCTGAACATGCACC+GGG 0.611573 3_2:-37227267 Msa0404730:three_prime_UTR
AGTAGGATTTCAAGAAGCGG+TGG 0.614756 3_2:-37231741 Msa0404730:CDS
TTGTGAAATATCTCCATGCA+AGG 0.620343 3_2:+37230250 None:intergenic
AAAACGGATAAATACGGTGG+TGG 0.622200 3_2:-37227777 Msa0404730:CDS
GCTGATCAGATGCTTCAAGT+AGG 0.623573 3_2:-37231758 Msa0404730:CDS
GGTGCTAACACCAAAGCCAA+AGG 0.626475 3_2:+37231998 None:intergenic
ATGTTTGGTAGCACGAGTAG+TGG 0.629110 3_2:-37227939 Msa0404730:CDS
GAAATAATTAGTCTTTATGG+GGG 0.630072 3_2:-37231917 Msa0404730:CDS
GCTTGAAGTTATACTAGATG+AGG 0.633346 3_2:+37227508 None:intergenic
GGTCGATATGGCTCTTCGGG+AGG 0.633477 3_2:-37227918 Msa0404730:CDS
AGTTCAAGGAAGTCAGGAGG+GGG 0.635455 3_2:-37227819 Msa0404730:CDS
GTTGCTCTTCAAGATTGCCA+AGG 0.637000 3_2:+37227233 None:intergenic
GCCAGAACCTAGGAGATCCA+AGG 0.637533 3_2:-37227671 Msa0404730:three_prime_UTR
CCATCCATAGGAAAGTGAGT+AGG 0.648584 3_2:-37227368 Msa0404730:three_prime_UTR
TCACACAGAAAATCAATCCA+GGG 0.653560 3_2:-37229348 Msa0404730:CDS
TCTAGTTCAAGGAAGTCAGG+AGG 0.658828 3_2:-37227822 Msa0404730:CDS
AATGGCTATGGGAAATCCAG+TGG 0.659955 3_2:-37227855 Msa0404730:CDS
TCAAGTAGGATTTCAAGAAG+CGG 0.666197 3_2:-37231744 Msa0404730:CDS
GCCATGAAGATCATCTCACA+AGG 0.682401 3_2:-37226955 Msa0404730:three_prime_UTR
TAGTTCAAGGAAGTCAGGAG+GGG 0.687822 3_2:-37227820 Msa0404730:CDS
GAGGTGTAACAACTATATTG+CGG 0.703613 3_2:+37227109 None:intergenic
GAGAATTTCCCTATATAACG+AGG 0.709929 3_2:+37227090 None:intergenic
ACAATCTCCTAGAAACTGCG+TGG 0.723388 3_2:-37227295 Msa0404730:three_prime_UTR
GGTAAAACGGATAAATACGG+TGG 0.734116 3_2:-37227780 Msa0404730:CDS
CGTTGGATGTAAATTCACAG+AGG 0.770685 3_2:-37229303 Msa0404730:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTTTGATTATATTTGT+GGG - chr3_2:37227735-37227754 Msa0404730:CDS 10.0%
!!! AATATAATATATTTTTTTGG+TGG + chr3_2:37228237-37228256 None:intergenic 10.0%
!! TCTGAATAAAAAATATCATT+TGG + chr3_2:37227297-37227316 None:intergenic 15.0%
!!! TTAATTAGATTTTTTCTTGA+TGG + chr3_2:37227405-37227424 None:intergenic 15.0%
!! TAATTTAAAAAAATGGTGTA+GGG + chr3_2:37227451-37227470 None:intergenic 15.0%
!! TTAATTTAAAAAAATGGTGT+AGG + chr3_2:37227452-37227471 None:intergenic 15.0%
!!! ACACCATTTTTTTAAATTAA+AGG - chr3_2:37227452-37227471 Msa0404730:three_prime_UTR 15.0%
!!! GTACCTTTAATTTAAAAAAA+TGG + chr3_2:37227458-37227477 None:intergenic 15.0%
!! GTTAAGTGTTTAAAAAATAT+AGG - chr3_2:37227647-37227666 Msa0404730:three_prime_UTR 15.0%
!!! GTATATTTTGATTATATTTG+TGG - chr3_2:37227734-37227753 Msa0404730:CDS 15.0%
!!! AAACTAAAATTTCTTTTGAA+GGG + chr3_2:37227781-37227800 None:intergenic 15.0%
!!! TAAACTAAAATTTCTTTTGA+AGG + chr3_2:37227782-37227801 None:intergenic 15.0%
!!! TTATATTTTCTCATGATTTT+TGG - chr3_2:37228250-37228269 Msa0404730:intron 15.0%
!!! TATATTTTCTCATGATTTTT+GGG - chr3_2:37228251-37228270 Msa0404730:intron 15.0%
!!! TGATTTAAAACAAAAAGTTT+AGG + chr3_2:37228736-37228755 None:intergenic 15.0%
!! TAAATAAGAAACAACTTAAA+AGG + chr3_2:37229020-37229039 None:intergenic 15.0%
!! ATTTATATTATGAAAGCTAA+CGG + chr3_2:37230009-37230028 None:intergenic 15.0%
!! TACTATTACGAAAATAAAAT+TGG + chr3_2:37230142-37230161 None:intergenic 15.0%
!!! CTATTTTAACTGTTATTATT+TGG + chr3_2:37231224-37231243 None:intergenic 15.0%
!! AATAATAACAGTTAAAATAG+AGG - chr3_2:37231224-37231243 Msa0404730:intron 15.0%
!!! TTGGAAATAATTAGTCTTTA+TGG - chr3_2:37226921-37226940 Msa0404730:three_prime_UTR 20.0%
!!! TGGAAATAATTAGTCTTTAT+GGG - chr3_2:37226922-37226941 Msa0404730:three_prime_UTR 20.0%
!!! TAAGTATACAAATCTGTTTT+GGG - chr3_2:37227243-37227262 Msa0404730:three_prime_UTR 20.0%
!! TAATTAACAAAATCTTCTTG+AGG - chr3_2:37227418-37227437 Msa0404730:three_prime_UTR 20.0%
!!! TGTTTCGATAAATATTTTTC+TGG - chr3_2:37227808-37227827 Msa0404730:CDS 20.0%
!! TGAGATTTGATGTATATATT+AGG - chr3_2:37228009-37228028 Msa0404730:intron 20.0%
!! ATTTGATGTATATATTAGGT+TGG - chr3_2:37228013-37228032 Msa0404730:intron 20.0%
!!! CCATATTATATATTTTCTCA+CGG - chr3_2:37228138-37228157 Msa0404730:intron 20.0%
!! GGAAAGTTCAAATTAAAAAA+AGG + chr3_2:37228959-37228978 None:intergenic 20.0%
!! ACAAATATCTCTGAATTATT+TGG + chr3_2:37229419-37229438 None:intergenic 20.0%
!! TCTATAACATACTAATAACA+TGG + chr3_2:37229715-37229734 None:intergenic 20.0%
!! ATTAGTATGTTATAGAATCA+TGG - chr3_2:37229719-37229738 Msa0404730:intron 20.0%
!!! GTTAGCTTTCATAATATAAA+TGG - chr3_2:37230008-37230027 Msa0404730:intron 20.0%
!!! AGTTTTATTCATTCTCAAAA+AGG + chr3_2:37230073-37230092 None:intergenic 20.0%
!! AAAATTGAGAAACGTTTATA+AGG - chr3_2:37230481-37230500 Msa0404730:intron 20.0%
!! ATTATAAAACATAGTGATCA+GGG + chr3_2:37230805-37230824 None:intergenic 20.0%
!! AATTATAAAACATAGTGATC+AGG + chr3_2:37230806-37230825 None:intergenic 20.0%
!!! AGATACAACATTTTAGAAAT+AGG - chr3_2:37231694-37231713 Msa0404730:CDS 20.0%
!! GAAAATATATCATTAATTCC+CGG + chr3_2:37231813-37231832 None:intergenic 20.0%
! AGACTAATTATTTCCAAGTT+AGG + chr3_2:37226918-37226937 None:intergenic 25.0%
!!! GGAAATAATTAGTCTTTATG+GGG - chr3_2:37226923-37226942 Msa0404730:three_prime_UTR 25.0%
!!! GAAATAATTAGTCTTTATGG+GGG - chr3_2:37226924-37226943 Msa0404730:three_prime_UTR 25.0%
! TGTTATTGATCTTCTCAAAA+GGG - chr3_2:37227016-37227035 Msa0404730:three_prime_UTR 25.0%
! CTTACAAGATCAATTGTTAA+GGG + chr3_2:37227227-37227246 None:intergenic 25.0%
! ACTTACAAGATCAATTGTTA+AGG + chr3_2:37227228-37227247 None:intergenic 25.0%
!! GTAAGTATACAAATCTGTTT+TGG - chr3_2:37227242-37227261 Msa0404730:three_prime_UTR 25.0%
!! CCAAATAATAAGCTTTTGTT+AGG + chr3_2:37227379-37227398 None:intergenic 25.0%
! CCTAACAAAAGCTTATTATT+TGG - chr3_2:37227376-37227395 Msa0404730:three_prime_UTR 25.0%
! CCGTGAGAAAATATATAATA+TGG + chr3_2:37228141-37228160 None:intergenic 25.0%
!!! AAACAGCTATTTCAATGTTT+TGG - chr3_2:37228646-37228665 Msa0404730:intron 25.0%
! ATATATTCTCGAAAAGTCAT+AGG + chr3_2:37228850-37228869 None:intergenic 25.0%
! CAAATAAAAAATGTTCCTGT+AGG - chr3_2:37228921-37228940 Msa0404730:intron 25.0%
! AATAACGAATTGAGTAACAA+TGG + chr3_2:37229347-37229366 None:intergenic 25.0%
! ATTATGTGATTATTTGACCT+TGG - chr3_2:37229364-37229383 Msa0404730:CDS 25.0%
! AATATAAGATGCATACGAAA+AGG + chr3_2:37229578-37229597 None:intergenic 25.0%
!!! CTTATATTTTTTACTCGAAG+TGG - chr3_2:37229590-37229609 Msa0404730:intron 25.0%
!! AACAATCATTAGATTTTACC+AGG - chr3_2:37229744-37229763 Msa0404730:intron 25.0%
!! ACAATCATTAGATTTTACCA+GGG - chr3_2:37229745-37229764 Msa0404730:intron 25.0%
! ACAAATGTAAAATAAAACCC+TGG + chr3_2:37229765-37229784 None:intergenic 25.0%
!! CTGGATTTGATTAAGATTTT+TGG + chr3_2:37229816-37229835 None:intergenic 25.0%
! TTCATAATATAAATGGTGAG+TGG - chr3_2:37230015-37230034 Msa0404730:intron 25.0%
! TCATAATATAAATGGTGAGT+GGG - chr3_2:37230016-37230035 Msa0404730:intron 25.0%
! GAGAATGAATAAAACTTGAT+CGG - chr3_2:37230077-37230096 Msa0404730:intron 25.0%
! GAAAATAAAATTGGCCAATA+TGG + chr3_2:37230133-37230152 None:intergenic 25.0%
! AATTATACCTTGTAAGCTAT+TGG - chr3_2:37230197-37230216 Msa0404730:CDS 25.0%
! TTTATTGGATAGTTAGTAAG+AGG - chr3_2:37230349-37230368 Msa0404730:CDS 25.0%
!!! AGTTCTCATTTTAACCAAAT+TGG - chr3_2:37230562-37230581 Msa0404730:intron 25.0%
! ATCGAATAACAGTTTGATAA+AGG + chr3_2:37230604-37230623 None:intergenic 25.0%
! TCAAACTGTTATTCGATAAA+TGG - chr3_2:37230607-37230626 Msa0404730:intron 25.0%
! CAAACTGTTATTCGATAAAT+GGG - chr3_2:37230608-37230627 Msa0404730:intron 25.0%
! CAATAATAAATGTTCACCAT+TGG + chr3_2:37230653-37230672 None:intergenic 25.0%
! GAACATTTATTATTGATCTC+TGG - chr3_2:37230658-37230677 Msa0404730:intron 25.0%
! ATATCACCATTGCTATATAA+AGG + chr3_2:37231633-37231652 None:intergenic 25.0%
!!! ACAACATTTTAGAAATAGGT+AGG - chr3_2:37231698-37231717 Msa0404730:CDS 25.0%
!!! CTTTTTTTCTTCTACATTTC+CGG - chr3_2:37231791-37231810 Msa0404730:CDS 25.0%
!!! TTTTTTTCTTCTACATTTCC+GGG - chr3_2:37231792-37231811 Msa0404730:CDS 25.0%
!! TATTTTCGTTGTTTACATTC+TGG - chr3_2:37231826-37231845 Msa0404730:CDS 25.0%
!! ATTTTCGTTGTTTACATTCT+GGG - chr3_2:37231827-37231846 Msa0404730:CDS 25.0%
! TTTATTGAGAAAATGGAAAC+CGG - chr3_2:37231914-37231933 Msa0404730:CDS 25.0%
! ACAAGTTGAAAAGGAATTCA+AGG - chr3_2:37226884-37226903 Msa0404730:three_prime_UTR 30.0%
!! TTGCTAATTTGTTGCTGAAT+AGG + chr3_2:37226954-37226973 None:intergenic 30.0%
! GTGTTATTGATCTTCTCAAA+AGG - chr3_2:37227015-37227034 Msa0404730:three_prime_UTR 30.0%
GTTATTGATCTTCTCAAAAG+GGG - chr3_2:37227017-37227036 Msa0404730:three_prime_UTR 30.0%
GTAAGATTCTTTATCCAAGA+AGG + chr3_2:37227185-37227204 None:intergenic 30.0%
! CAATTGTTAAGGGTTTGTTT+AGG + chr3_2:37227217-37227236 None:intergenic 30.0%
ATTTATCCTCAAAAACCCTT+TGG + chr3_2:37227347-37227366 None:intergenic 30.0%
CTGGAACAATTTGAAGAATA+TGG + chr3_2:37227533-37227552 None:intergenic 30.0%
ACTTAACTCTGCATTTATTG+GGG + chr3_2:37227634-37227653 None:intergenic 30.0%
CACTTAACTCTGCATTTATT+GGG + chr3_2:37227635-37227654 None:intergenic 30.0%
ACACTTAACTCTGCATTTAT+TGG + chr3_2:37227636-37227655 None:intergenic 30.0%
ATTATATTTGTGGGTTTCAC+TGG - chr3_2:37227744-37227763 Msa0404730:CDS 30.0%
!! AAGAATTCCTGCTTTAGAAT+AGG + chr3_2:37228095-37228114 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG - chr3_2:37228189-37228208 Msa0404730:intron 30.0%
!!! TATATTTTTTTGGTGGTGTC+CGG + chr3_2:37228230-37228249 None:intergenic 30.0%
TTAATGATCTATCCTCTGAT+AGG - chr3_2:37228472-37228491 Msa0404730:intron 30.0%
TGATCGTCTATCACATATAA+TGG - chr3_2:37228547-37228566 Msa0404730:intron 30.0%
GAACTTACAAGATCAACATT+TGG + chr3_2:37228707-37228726 None:intergenic 30.0%
TAGTTAAAATTGCCTACACT+AGG + chr3_2:37229082-37229101 None:intergenic 30.0%
ATTACCTAACTCTAACTAAC+TGG + chr3_2:37229115-37229134 None:intergenic 30.0%
ACATTCTACAATTCTCCTAT+AGG - chr3_2:37229184-37229203 Msa0404730:intron 30.0%
AAGCATTCAACAATTCATCA+TGG - chr3_2:37229217-37229236 Msa0404730:intron 30.0%
TTCATAATGTATTACCTGTG+AGG + chr3_2:37229393-37229412 None:intergenic 30.0%
ATTTATCATGAAACATGAGC+TGG + chr3_2:37229690-37229709 None:intergenic 30.0%
ATTTAAACACAATACCTCAC+TGG + chr3_2:37229870-37229889 None:intergenic 30.0%
!! GAGGTATTGTGTTTAAATTG+AGG - chr3_2:37229872-37229891 Msa0404730:intron 30.0%
ATCTTTAGTAGCTTATATGC+TGG - chr3_2:37229909-37229928 Msa0404730:intron 30.0%
TATGCTGGATATTATCTAGA+TGG - chr3_2:37229924-37229943 Msa0404730:intron 30.0%
ATGCTGGATATTATCTAGAT+GGG - chr3_2:37229925-37229944 Msa0404730:intron 30.0%
! TACTTGTCCATTTTCCATAT+TGG - chr3_2:37230116-37230135 Msa0404730:intron 30.0%
AAATTGGCCAATATGGAAAA+TGG + chr3_2:37230126-37230145 None:intergenic 30.0%
ATCTTACAACAAAGATCTTC+TGG + chr3_2:37230253-37230272 None:intergenic 30.0%
! ATCTTTGTTGTAAGATGTCA+AGG - chr3_2:37230257-37230276 Msa0404730:CDS 30.0%
!! CCAACACAGTTTAGAATTTT+TGG + chr3_2:37230289-37230308 None:intergenic 30.0%
CCAAAAATTCTAAACTGTGT+TGG - chr3_2:37230286-37230305 Msa0404730:CDS 30.0%
! CTGAAGTTCTCAACTTTTAT+TGG - chr3_2:37230334-37230353 Msa0404730:CDS 30.0%
!! TGAGTCTTGTCTCAATTTTT+AGG - chr3_2:37230376-37230395 Msa0404730:intron 30.0%
!! TTGTCTCAATTTTTAGGAAC+TGG - chr3_2:37230382-37230401 Msa0404730:intron 30.0%
GAAGTTATTGAGAATATGCT+GGG + chr3_2:37230449-37230468 None:intergenic 30.0%
AGAAGTTATTGAGAATATGC+TGG + chr3_2:37230450-37230469 None:intergenic 30.0%
TATAAGGATGATACTAGAGT+TGG - chr3_2:37230497-37230516 Msa0404730:intron 30.0%
AGTTGGTTATTATGATCATG+AGG - chr3_2:37230514-37230533 Msa0404730:intron 30.0%
TTGGTTAAAATGAGAACTCA+TGG + chr3_2:37230560-37230579 None:intergenic 30.0%
TAAATGGGCAGTACATAAAA+TGG - chr3_2:37230623-37230642 Msa0404730:intron 30.0%
TACATAAAATGGCATTCCAA+TGG - chr3_2:37230634-37230653 Msa0404730:intron 30.0%
!! TGAGGAATTTTCTGGTAAAA+CGG - chr3_2:37231048-37231067 Msa0404730:intron 30.0%
TCTGGTAAAACGGATAAATA+CGG - chr3_2:37231058-37231077 Msa0404730:intron 30.0%
! ACTTCTTGATGGTTTAAGTT+TGG - chr3_2:37231285-37231304 Msa0404730:intron 30.0%
TTCTCCATATCAAGTGATAA+GGG + chr3_2:37231372-37231391 None:intergenic 30.0%
TTTCTCCATATCAAGTGATA+AGG + chr3_2:37231373-37231392 None:intergenic 30.0%
ACTTGATATGGAGAAAGTTA+CGG - chr3_2:37231377-37231396 Msa0404730:intron 30.0%
ATCCAAAAATATGCATCGTA+CGG + chr3_2:37231517-37231536 None:intergenic 30.0%
CAATGGTGATATGTTTCATT+TGG - chr3_2:37231641-37231660 Msa0404730:CDS 30.0%
TTGTTCCTTGAAGTATGTAA+TGG - chr3_2:37231667-37231686 Msa0404730:CDS 30.0%
TGTTCCTTGAAGTATGTAAT+GGG - chr3_2:37231668-37231687 Msa0404730:CDS 30.0%
TTGTTACACCTCGTTATATA+GGG - chr3_2:37231743-37231762 Msa0404730:CDS 30.0%
GGAACTGTTTATTGAGAAAA+TGG - chr3_2:37231907-37231926 Msa0404730:CDS 30.0%
CAAAAAACATCAACTTCAAC+CGG + chr3_2:37231936-37231955 None:intergenic 30.0%
CAGCAACAAATTAGCAAACT+TGG - chr3_2:37226957-37226976 Msa0404730:three_prime_UTR 35.0%
CAAATTAGCAAACTTGGTAG+TGG - chr3_2:37226963-37226982 Msa0404730:three_prime_UTR 35.0%
TCAAGTAGGATTTCAAGAAG+CGG - chr3_2:37227097-37227116 Msa0404730:three_prime_UTR 35.0%
ATAAGAGTTTGACGCTTAGA+AGG + chr3_2:37227146-37227165 None:intergenic 35.0%
!! ATACAAATCTGTTTTGGGCA+TGG - chr3_2:37227248-37227267 Msa0404730:three_prime_UTR 35.0%
CTTAACTCTGCATTTATTGG+GGG + chr3_2:37227633-37227652 None:intergenic 35.0%
AAAAATTCGTCCAGCTACAA+TGG + chr3_2:37227682-37227701 None:intergenic 35.0%
! TTGTAGCTGGACGAATTTTT+AGG - chr3_2:37227682-37227701 Msa0404730:exon 35.0%
!!! TTTGGAAGTTTTGCTGTTGT+AGG - chr3_2:37227853-37227872 Msa0404730:CDS 35.0%
AGAATAGGCATTAGATGCAA+TGG + chr3_2:37228080-37228099 None:intergenic 35.0%
!! TCTAATGCCTATTCTAAAGC+AGG - chr3_2:37228085-37228104 Msa0404730:intron 35.0%
TGGAGTCTTACTGTTATAAG+AGG + chr3_2:37228121-37228140 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr3_2:37228194-37228213 Msa0404730:intron 35.0%
!!! ATATTTTTTTGGTGGTGTCC+GGG + chr3_2:37228229-37228248 None:intergenic 35.0%
AGTATAGTGACAAGATTGCA+GGG + chr3_2:37228439-37228458 None:intergenic 35.0%
AAGTATAGTGACAAGATTGC+AGG + chr3_2:37228440-37228459 None:intergenic 35.0%
TTGTGAAATATCTCCATGCA+AGG + chr3_2:37228594-37228613 None:intergenic 35.0%
!! CAGCTATTTCAATGTTTTGG+TGG - chr3_2:37228649-37228668 Msa0404730:intron 35.0%
TTCTCGAAAAGTCATAGGAA+TGG + chr3_2:37228845-37228864 None:intergenic 35.0%
TTGTTAACTACATACGACCA+TGG - chr3_2:37228880-37228899 Msa0404730:intron 35.0%
AAAAAATGTTCCTGTAGGTG+TGG - chr3_2:37228926-37228945 Msa0404730:intron 35.0%
AAAAATGTTCCTGTAGGTGT+GGG - chr3_2:37228927-37228946 Msa0404730:intron 35.0%
TTCCACATATTTGAGTGAGA+AGG - chr3_2:37228975-37228994 Msa0404730:intron 35.0%
TTCCTTCTCACTCAAATATG+TGG + chr3_2:37228980-37228999 None:intergenic 35.0%
TGCTGTAATTCGTTTGCAAT+GGG + chr3_2:37229138-37229157 None:intergenic 35.0%
TTGCTGTAATTCGTTTGCAA+TGG + chr3_2:37229139-37229158 None:intergenic 35.0%
GAGATATTTGTTCATCGATC+TGG - chr3_2:37229428-37229447 Msa0404730:CDS 35.0%
AATAGCAGTTCCTTTCTTAC+CGG + chr3_2:37229468-37229487 None:intergenic 35.0%
TTCACACAGAAAATCAATCC+AGG - chr3_2:37229492-37229511 Msa0404730:intron 35.0%
TCACACAGAAAATCAATCCA+GGG - chr3_2:37229493-37229512 Msa0404730:intron 35.0%
!! CTAATTTGTTGCTAGACACA+TGG - chr3_2:37229635-37229654 Msa0404730:intron 35.0%
CAGATATAGAAAACACAGAC+TGG + chr3_2:37229835-37229854 None:intergenic 35.0%
! TATTATCTAGATGGGTTCGA+AGG - chr3_2:37229933-37229952 Msa0404730:intron 35.0%
ACACATGAATCCAAGTTTGA+TGG - chr3_2:37229974-37229993 Msa0404730:intron 35.0%
CACATGAATCCAAGTTTGAT+GGG - chr3_2:37229975-37229994 Msa0404730:intron 35.0%
TAATATAAATGGTGAGTGGG+AGG - chr3_2:37230019-37230038 Msa0404730:intron 35.0%
AATATAAATGGTGAGTGGGA+GGG - chr3_2:37230020-37230039 Msa0404730:intron 35.0%
GGAAAATGGACAAGTATTAC+TGG + chr3_2:37230112-37230131 None:intergenic 35.0%
TCAAACATGTGTGTAAAGCA+TGG + chr3_2:37230418-37230437 None:intergenic 35.0%
TGGTTATTATGATCATGAGG+TGG - chr3_2:37230517-37230536 Msa0404730:intron 35.0%
TCAATTGTGTGCTACCAATT+TGG + chr3_2:37230579-37230598 None:intergenic 35.0%
! AAGTTTAGCTCAGGTAAATC+TGG - chr3_2:37231124-37231143 Msa0404730:intron 35.0%
! AGTTTAGCTCAGGTAAATCT+GGG - chr3_2:37231125-37231144 Msa0404730:intron 35.0%
AGAAATTAAAGCCAGAACCT+AGG - chr3_2:37231160-37231179 Msa0404730:intron 35.0%
CACTTACCAGGAGTTAAAAT+GGG + chr3_2:37231253-37231272 None:intergenic 35.0%
AAACCATCAAGAAGTGAAGA+TGG + chr3_2:37231280-37231299 None:intergenic 35.0%
GCTTGAAGTTATACTAGATG+AGG + chr3_2:37231336-37231355 None:intergenic 35.0%
TATCAAGTGATAAGGGGATT+AGG + chr3_2:37231365-37231384 None:intergenic 35.0%
AATCCCCTTATCACTTGATA+TGG - chr3_2:37231365-37231384 Msa0404730:intron 35.0%
TCTCCATATCAAGTGATAAG+GGG + chr3_2:37231371-37231390 None:intergenic 35.0%
GAATGATACATTCTGCTTTG+AGG - chr3_2:37231405-37231424 Msa0404730:intron 35.0%
TCCAAAAATATGCATCGTAC+GGG + chr3_2:37231516-37231535 None:intergenic 35.0%
GAGCAACCTTTATATAGCAA+TGG - chr3_2:37231624-37231643 Msa0404730:CDS 35.0%
AGGTGTAACAACTATATTGC+GGG + chr3_2:37231734-37231753 None:intergenic 35.0%
GAGGTGTAACAACTATATTG+CGG + chr3_2:37231735-37231754 None:intergenic 35.0%
GTTGTTACACCTCGTTATAT+AGG - chr3_2:37231742-37231761 Msa0404730:CDS 35.0%
GAGAATTTCCCTATATAACG+AGG + chr3_2:37231754-37231773 None:intergenic 35.0%
! ACTTGCACGACAAGTTGAAA+AGG - chr3_2:37226875-37226894 Msa0404730:three_prime_UTR 40.0%
AGTGGCGTAGATATTGTAGT+TGG - chr3_2:37226981-37227000 Msa0404730:three_prime_UTR 40.0%
AGAAGATCAATAACACGTCC+AGG + chr3_2:37227011-37227030 None:intergenic 40.0%
GCGTCAAACTCTTATGTTCT+CGG - chr3_2:37227151-37227170 Msa0404730:three_prime_UTR 40.0%
TATTCAGATTGTGCCTAGTC+TGG - chr3_2:37227309-37227328 Msa0404730:three_prime_UTR 40.0%
! TGCCTAGTCTGGTAATGATA+TGG - chr3_2:37227320-37227339 Msa0404730:three_prime_UTR 40.0%
! GCCTAGTCTGGTAATGATAT+GGG - chr3_2:37227321-37227340 Msa0404730:three_prime_UTR 40.0%
! TGGTAATGATATGGGCCAAA+GGG - chr3_2:37227329-37227348 Msa0404730:three_prime_UTR 40.0%
! AGACAGAATGTGCTAGTTTC+TGG + chr3_2:37227552-37227571 None:intergenic 40.0%
TGGAGATTCTGATCAGAAGT+TGG - chr3_2:37228033-37228052 Msa0404730:intron 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr3_2:37228195-37228214 Msa0404730:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG - chr3_2:37228196-37228215 Msa0404730:intron 40.0%
CTTTAGCATGTTCCTATCAG+AGG + chr3_2:37228487-37228506 None:intergenic 40.0%
CTCTGATAGGAACATGCTAA+AGG - chr3_2:37228485-37228504 Msa0404730:intron 40.0%
TGATAGGAACATGCTAAAGG+AGG - chr3_2:37228488-37228507 Msa0404730:intron 40.0%
!! GGCAAAAAGCATTAAATGCG+AGG - chr3_2:37228568-37228587 Msa0404730:intron 40.0%
CAGAGAGAAAGAACTCTTAC+TGG - chr3_2:37228617-37228636 Msa0404730:intron 40.0%
! TCACTTCCATTCCTTGTTTC+TGG - chr3_2:37228768-37228787 Msa0404730:intron 40.0%
AACTGTCCAGAAACAAGGAA+TGG + chr3_2:37228777-37228796 None:intergenic 40.0%
CAATCAACTGTCCAGAAACA+AGG + chr3_2:37228782-37228801 None:intergenic 40.0%
!! TGTTTCTGGACAGTTGATTG+AGG - chr3_2:37228782-37228801 Msa0404730:intron 40.0%
TCGAAAAGTCATAGGAATGG+AGG + chr3_2:37228842-37228861 None:intergenic 40.0%
GTTGCCAGTTAGTTAGAGTT+AGG - chr3_2:37229108-37229127 Msa0404730:intron 40.0%
TGCTTAGAAGAAGCTCCTAT+AGG + chr3_2:37229202-37229221 None:intergenic 40.0%
TATTACCTGTGAGGAAACCA+AGG + chr3_2:37229384-37229403 None:intergenic 40.0%
CTCAATTGTCTTTACATCCC+TGG + chr3_2:37229513-37229532 None:intergenic 40.0%
AAGACAATTGAGAGAGACGT+TGG - chr3_2:37229521-37229540 Msa0404730:intron 40.0%
CGTTGGATGTAAATTCACAG+AGG - chr3_2:37229538-37229557 Msa0404730:intron 40.0%
TGGATGTAAATTCACAGAGG+TGG - chr3_2:37229541-37229560 Msa0404730:intron 40.0%
TCATGAAACATGAGCTGGAT+GGG + chr3_2:37229685-37229704 None:intergenic 40.0%
ATCATGAAACATGAGCTGGA+TGG + chr3_2:37229686-37229705 None:intergenic 40.0%
GTAAAGTAGCCCATCAAACT+TGG + chr3_2:37229987-37230006 None:intergenic 40.0%
ACAACAAAGATCTTCTGGTC+TGG + chr3_2:37230248-37230267 None:intergenic 40.0%
!! CTAAACTGTGTTGGTTTGCT+TGG - chr3_2:37230295-37230314 Msa0404730:CDS 40.0%
TGCTTGGAAGTGATCTCAAA+AGG - chr3_2:37230311-37230330 Msa0404730:CDS 40.0%
!! TTGATCTCTGGTGTTGATTG+TGG - chr3_2:37230670-37230689 Msa0404730:intron 40.0%
GCGCTTCTATGCTAACATTT+AGG - chr3_2:37230778-37230797 Msa0404730:intron 40.0%
CCACTTTCAACAGCAATCTT+CGG + chr3_2:37230872-37230891 None:intergenic 40.0%
!! TCAAGTAGTAGTTCTGGATC+TGG - chr3_2:37230959-37230978 Msa0404730:intron 40.0%
TGGATTTCCCATAGCCATTT+CGG + chr3_2:37230985-37231004 None:intergenic 40.0%
! TATGGGAAATCCAGTGGTTT+TGG - chr3_2:37230992-37231011 Msa0404730:intron 40.0%
GGTAAAACGGATAAATACGG+TGG - chr3_2:37231061-37231080 Msa0404730:intron 40.0%
AAAACGGATAAATACGGTGG+TGG - chr3_2:37231064-37231083 Msa0404730:intron 40.0%
TCAGGTAAATCTGGGAGATA+TGG - chr3_2:37231133-37231152 Msa0404730:intron 40.0%
GCACTTACCAGGAGTTAAAA+TGG + chr3_2:37231254-37231273 None:intergenic 40.0%
TCATCCTGAATTCCATCCAT+AGG - chr3_2:37231461-37231480 Msa0404730:intron 40.0%
CTTTCCTATGGATGGAATTC+AGG + chr3_2:37231468-37231487 None:intergenic 40.0%
TAATCTACCACGCAGTTTCT+AGG + chr3_2:37231556-37231575 None:intergenic 40.0%
AGAAACTGCGTGGTAGATTA+TGG - chr3_2:37231556-37231575 Msa0404730:intron 40.0%
!! TTATGGTTCTGAACATGCAC+CGG - chr3_2:37231573-37231592 Msa0404730:intron 40.0%
TCTGCCCATTACATACTTCA+AGG + chr3_2:37231675-37231694 None:intergenic 40.0%
TTCGTTGTTTACATTCTGGG+TGG - chr3_2:37231830-37231849 Msa0404730:CDS 40.0%
TCGTTGTTTACATTCTGGGT+GGG - chr3_2:37231831-37231850 Msa0404730:CDS 40.0%
TCCTTGTGAGATGATCTTCA+TGG + chr3_2:37231890-37231909 None:intergenic 40.0%
AACTTGTCGTGCAAGTTCTC+TGG + chr3_2:37226871-37226890 None:intergenic 45.0%
GCTGATCAGATGCTTCAAGT+AGG - chr3_2:37227083-37227102 Msa0404730:three_prime_UTR 45.0%
AGTAGGATTTCAAGAAGCGG+TGG - chr3_2:37227100-37227119 Msa0404730:three_prime_UTR 45.0%
AAACTGCAATATCCTCCTGC+TGG + chr3_2:37227274-37227293 None:intergenic 45.0%
GCCCATATCATTACCAGACT+AGG + chr3_2:37227325-37227344 None:intergenic 45.0%
! CTGGTAATGATATGGGCCAA+AGG - chr3_2:37227328-37227347 Msa0404730:three_prime_UTR 45.0%
! TATGGGCCAAAGGGTTTTTG+AGG - chr3_2:37227338-37227357 Msa0404730:three_prime_UTR 45.0%
TGCATTTATTGGGGGAGACA+GGG + chr3_2:37227625-37227644 None:intergenic 45.0%
TCCAGCTACAATGGTCTACA+TGG + chr3_2:37227673-37227692 None:intergenic 45.0%
TCTGATCAGAAGTTGGCAGA+TGG - chr3_2:37228040-37228059 Msa0404730:intron 45.0%
TGAGCTTAGCTCAGTTGGTT+TGG - chr3_2:37228167-37228186 Msa0404730:intron 45.0%
TAGACGATCAGCATCACGTT+TGG + chr3_2:37228537-37228556 None:intergenic 45.0%
ATTAAATGCGAGGCCTTGCA+TGG - chr3_2:37228578-37228597 Msa0404730:intron 45.0%
! CAACTGATGTTGCTTCTCGT+GGG - chr3_2:37228672-37228691 Msa0404730:intron 45.0%
AACTACATACGACCATGGTG+TGG - chr3_2:37228885-37228904 Msa0404730:intron 45.0%
AGGAAATATCCCACACCTAC+AGG + chr3_2:37228939-37228958 None:intergenic 45.0%
TGCTTGATAGGACCTAGTGT+AGG - chr3_2:37229067-37229086 Msa0404730:intron 45.0%
TTTGACCTTGGTTTCCTCAC+AGG - chr3_2:37229376-37229395 Msa0404730:CDS 45.0%
CATGAGCTGGATGGGATTTA+TGG + chr3_2:37229677-37229696 None:intergenic 45.0%
TGAACTAAGTTCTGCCAGTG+AGG - chr3_2:37229853-37229872 Msa0404730:intron 45.0%
ACCTTGTAAGCTATTGGTGC+TGG - chr3_2:37230203-37230222 Msa0404730:CDS 45.0%
TCCAGCACCAATAGCTTACA+AGG + chr3_2:37230207-37230226 None:intergenic 45.0%
! CCGAAGATTGCTGTTGAAAG+TGG - chr3_2:37230869-37230888 Msa0404730:intron 45.0%
AGTGGATCAGCAGACATGTT+TGG - chr3_2:37230887-37230906 Msa0404730:intron 45.0%
! ATGTTTGGTAGCACGAGTAG+TGG - chr3_2:37230902-37230921 Msa0404730:intron 45.0%
TAGTGGTCGATATGGCTCTT+CGG - chr3_2:37230919-37230938 Msa0404730:intron 45.0%
CGTCGATCAAGTAGTAGTTC+TGG - chr3_2:37230953-37230972 Msa0404730:intron 45.0%
AATGGCTATGGGAAATCCAG+TGG - chr3_2:37230986-37231005 Msa0404730:intron 45.0%
!!! GTTTTGGTGGCTCTAGTTCA+AGG - chr3_2:37231008-37231027 Msa0404730:intron 45.0%
! TCTAGTTCAAGGAAGTCAGG+AGG - chr3_2:37231019-37231038 Msa0404730:intron 45.0%
CTAGTTCAAGGAAGTCAGGA+GGG - chr3_2:37231020-37231039 Msa0404730:intron 45.0%
TAGTTCAAGGAAGTCAGGAG+GGG - chr3_2:37231021-37231040 Msa0404730:intron 45.0%
! GGGGGATTTGAGGAATTTTC+TGG - chr3_2:37231040-37231059 Msa0404730:intron 45.0%
GCTAAACTTTCCAAAGCCAC+TGG + chr3_2:37231113-37231132 None:intergenic 45.0%
!! GGCTTTGGAAAGTTTAGCTC+AGG - chr3_2:37231115-37231134 Msa0404730:intron 45.0%
!!! GCTGTGACTTAGCTGCTTTT+GGG - chr3_2:37231192-37231211 Msa0404730:intron 45.0%
!!! CTGTGACTTAGCTGCTTTTG+GGG - chr3_2:37231193-37231212 Msa0404730:intron 45.0%
!!! AGGAAGCCCATTTTAACTCC+TGG - chr3_2:37231244-37231263 Msa0404730:intron 45.0%
ACGCCATCTTCACTTCTTGA+TGG - chr3_2:37231274-37231293 Msa0404730:intron 45.0%
CCTACTCACTTTCCTATGGA+TGG + chr3_2:37231476-37231495 None:intergenic 45.0%
CCATCCATAGGAAAGTGAGT+AGG - chr3_2:37231473-37231492 Msa0404730:intron 45.0%
CACTCCTACTCACTTTCCTA+TGG + chr3_2:37231480-37231499 None:intergenic 45.0%
AAAATATGCATCGTACGGGC+TGG + chr3_2:37231512-37231531 None:intergenic 45.0%
! GCCCGTACGATGCATATTTT+TGG - chr3_2:37231512-37231531 Msa0404730:intron 45.0%
ACAATCTCCTAGAAACTGCG+TGG - chr3_2:37231546-37231565 Msa0404730:intron 45.0%
!! TATGGTTCTGAACATGCACC+GGG - chr3_2:37231574-37231593 Msa0404730:intron 45.0%
GTTGCTCTTCAAGATTGCCA+AGG + chr3_2:37231611-37231630 None:intergenic 45.0%
GCCATGAAGATCATCTCACA+AGG - chr3_2:37231886-37231905 Msa0404730:CDS 45.0%
!!! ATTACTTTATATATTTTTTT+TGG - chr3_2:37227835-37227854 Msa0404730:CDS 5.0%
!!! GAAAATATAATATATTTTTT+TGG + chr3_2:37228240-37228259 None:intergenic 5.0%
TGTCGTGCAAGTTCTCTGGT+TGG + chr3_2:37226867-37226886 None:intergenic 50.0%
GATATTGTAGTTGGCACGCC+TGG - chr3_2:37226990-37227009 Msa0404730:three_prime_UTR 50.0%
AAGGGGCTCACTGAAACTGA+AGG - chr3_2:37227034-37227053 Msa0404730:three_prime_UTR 50.0%
TCTCGGCAACAATGCCTTCT+TGG - chr3_2:37227168-37227187 Msa0404730:three_prime_UTR 50.0%
CTGCATTTATTGGGGGAGAC+AGG + chr3_2:37227626-37227645 None:intergenic 50.0%
GCCATGTAGACCATTGTAGC+TGG - chr3_2:37227669-37227688 Msa0404730:three_prime_UTR 50.0%
! GCAACTGATGTTGCTTCTCG+TGG - chr3_2:37228671-37228690 Msa0404730:intron 50.0%
CATACGACCATGGTGTGGTA+CGG - chr3_2:37228890-37228909 Msa0404730:intron 50.0%
TACTCAACCGTACCACACCA+TGG + chr3_2:37228900-37228919 None:intergenic 50.0%
CACTAGGTCCTATCAAGCAC+AGG + chr3_2:37229066-37229085 None:intergenic 50.0%
GTTCATCGATCTGGACGAAC+AGG - chr3_2:37229437-37229456 Msa0404730:CDS 50.0%
AGCACGAGTAGTGGTCGATA+TGG - chr3_2:37230911-37230930 Msa0404730:intron 50.0%
AGTGGTCGATATGGCTCTTC+GGG - chr3_2:37230920-37230939 Msa0404730:intron 50.0%
ATATGGCTCTTCGGGAGGTA+GGG - chr3_2:37230928-37230947 Msa0404730:intron 50.0%
!! AGTTCTGGATCTGGCCGAAA+TGG - chr3_2:37230968-37230987 Msa0404730:intron 50.0%
GATCTGGCCGAAATGGCTAT+GGG - chr3_2:37230975-37230994 Msa0404730:intron 50.0%
!!! GGGAAATCCAGTGGTTTTGG+TGG - chr3_2:37230995-37231014 Msa0404730:intron 50.0%
ACTAGAGCCACCAAAACCAC+TGG + chr3_2:37231005-37231024 None:intergenic 50.0%
! GGCTCTAGTTCAAGGAAGTC+AGG - chr3_2:37231016-37231035 Msa0404730:intron 50.0%
AGTTCAAGGAAGTCAGGAGG+GGG - chr3_2:37231022-37231041 Msa0404730:intron 50.0%
! ACGGATAAATACGGTGGTGG+AGG - chr3_2:37231067-37231086 Msa0404730:intron 50.0%
AGCAGTTCAAGTCGTTCCAG+TGG - chr3_2:37231094-37231113 Msa0404730:intron 50.0%
TCAAGTCGTTCCAGTGGCTT+TGG - chr3_2:37231100-37231119 Msa0404730:intron 50.0%
AAGCAGCTAAGTCACAGCCT+TGG + chr3_2:37231190-37231209 None:intergenic 50.0%
!! GGCTGTGACTTAGCTGCTTT+TGG - chr3_2:37231191-37231210 Msa0404730:intron 50.0%
TTCAAGATTGCCAAGGCCGA+AGG + chr3_2:37231604-37231623 None:intergenic 50.0%
!! ACATTCTGGGTGGGTTGTGT+TGG - chr3_2:37231840-37231859 Msa0404730:CDS 50.0%
CAAGGACGCTGCACCTAACT+TGG - chr3_2:37226902-37226921 Msa0404730:three_prime_UTR 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr3_2:37228165-37228184 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr3_2:37228162-37228181 Msa0404730:intron 55.0%
AAGGTCCGGGGTTCAAATCC+CGG - chr3_2:37228208-37228227 Msa0404730:intron 55.0%
CGTGCTCACCTGTGCTTGAT+AGG - chr3_2:37229055-37229074 Msa0404730:intron 55.0%
! ACAGGACGTGCCGGTAAGAA+AGG - chr3_2:37229455-37229474 Msa0404730:intron 55.0%
GATATGGCTCTTCGGGAGGT+AGG - chr3_2:37230927-37230946 Msa0404730:intron 55.0%
GGATCTGGCCGAAATGGCTA+TGG - chr3_2:37230974-37230993 Msa0404730:intron 55.0%
GAAGTCAGGAGGGGGATTTG+AGG - chr3_2:37231030-37231049 Msa0404730:intron 55.0%
GCCAGAACCTAGGAGATCCA+AGG - chr3_2:37231170-37231189 Msa0404730:intron 55.0%
GCCTTGGATCTCCTAGGTTC+TGG + chr3_2:37231174-37231193 None:intergenic 55.0%
GTCACAGCCTTGGATCTCCT+AGG + chr3_2:37231180-37231199 None:intergenic 55.0%
GAAGATGGCGTGCACTTACC+AGG + chr3_2:37231265-37231284 None:intergenic 55.0%
!! CTGGGTGGGTTGTGTTGGAT+TGG - chr3_2:37231845-37231864 Msa0404730:CDS 55.0%
!! CTGTTTTGGGCATGGCCAGC+AGG - chr3_2:37227256-37227275 Msa0404730:three_prime_UTR 60.0%
! TTTTGGGCATGGCCAGCAGG+AGG - chr3_2:37227259-37227278 Msa0404730:three_prime_UTR 60.0%
GGTGTCCGGGATTTGAACCC+CGG + chr3_2:37228216-37228235 None:intergenic 60.0%
TCTGGACGAACAGGACGTGC+CGG - chr3_2:37229446-37229465 Msa0404730:CDS 60.0%
GGTCGATATGGCTCTTCGGG+AGG - chr3_2:37230923-37230942 Msa0404730:intron 60.0%
ACATGCACCGGGTGTGCCTT+CGG - chr3_2:37231585-37231604 Msa0404730:intron 60.0%
ACCGGGTGTGCCTTCGGCCT+TGG - chr3_2:37231591-37231610 Msa0404730:intron 70.0%
! GCCAAGGCCGAAGGCACACC+CGG + chr3_2:37231595-37231614 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 37226846 37232017 37226846 ID=Msa0404730;Name=Msa0404730
chr3_2 mRNA 37226846 37232017 37226846 ID=Msa0404730-mRNA-1;Parent=Msa0404730;Name=Msa0404730-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.66|1|1|0.66|1|4|849|361
chr3_2 exon 37226846 37227997 37226846 ID=Msa0404730-mRNA-1:exon:7434;Parent=Msa0404730-mRNA-1
chr3_2 exon 37229304 37229465 37229304 ID=Msa0404730-mRNA-1:exon:7433;Parent=Msa0404730-mRNA-1
chr3_2 exon 37230145 37230369 37230145 ID=Msa0404730-mRNA-1:exon:7432;Parent=Msa0404730-mRNA-1
chr3_2 exon 37231622 37232017 37231622 ID=Msa0404730-mRNA-1:exon:7431;Parent=Msa0404730-mRNA-1
chr3_2 CDS 37231622 37232017 37231622 ID=Msa0404730-mRNA-1:cds;Parent=Msa0404730-mRNA-1
chr3_2 CDS 37230145 37230369 37230145 ID=Msa0404730-mRNA-1:cds;Parent=Msa0404730-mRNA-1
chr3_2 CDS 37229304 37229465 37229304 ID=Msa0404730-mRNA-1:cds;Parent=Msa0404730-mRNA-1
chr3_2 CDS 37227695 37227997 37227695 ID=Msa0404730-mRNA-1:cds;Parent=Msa0404730-mRNA-1
chr3_2 three_prime_UTR 37226846 37227694 37226846 ID=Msa0404730-mRNA-1:three_prime_utr;Parent=Msa0404730-mRNA-1
Gene Sequence

>Msa0404730

TTGGCTTTGGTGTTAGCACCAACCAGAGAACTTGCACGACAAGTTGAAAAGGAATTCAAGGACGCTGCACCTAACTTGGAAATAATTAGTCTTTATGGGGGTATGCCTATTCAGCAACAAATTAGCAAACTTGGTAGTGGCGTAGATATTGTAGTTGGCACGCCTGGACGTGTTATTGATCTTCTCAAAAGGGGCTCACTGAAACTGAAGGATGTTAATTATGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTAGGATTTCAAGAAGCGGTGGAGACTATCTTGCAGAAGTTGCCTTCTAAGCGTCAAACTCTTATGTTCTCGGCAACAATGCCTTCTTGGATAAAGAATCTTACGCGCAATTACCTAAACAAACCCTTAACAATTGATCTTGAACATGCTAAAGGAGGAAAGTGTATTGTTTTCACTCAAACCAAACGTGATGCTGATCGTCTATCACATATAATGGCAAAAAGCATTAAATGCGAGGCCTTGCATGGAGATATTTCACAAACTCAGAGAGAAAGAACTCTTACTGGCTTTAGAAACAGCTATTTCAATGTTTTGGTGGCAACTGATGTTGCTTCTCGTGGGCTTGATATACCAAATGTTGATCTTGTAATACATTATGAACTTCCAAATAATTCAGAGATATTTGTTCATCGATCTGGACGAACAGGACGTGCCGGTAAGAAAGGAACTGCTATTCTTGTTCACACAGAAAATCAATCCAGGGATGTAAAGACAATTGAGAGAGACGTTGGATGTAAATTCACAGAGTTACCGAAGATTGCTGTTGAAAGTGGATCAGCAGACATGTTTGGTAGCACGAGTAGTGGTCGATATGGCTCTTCGGGAGGTAGGGATCGTCGATCAAGTAGTAGTTCTGGATCTGGCCGAAATGGCTATGGGAAATCCAGTGGTTTTGGTGGCTCTAGTTCAAGGAAGTCAGGAGGGGGATTTGAGGAATTTTCTGGTAAAACGGATAAATACGGTGGTGGAGGATTTAGCAGTTCAAGTCGTTCCAGTGGCTTTGGAAAGTTTAGCTCAGGTAAATCTGGGAGATATGGTGACAGAAATTAA
Protein sequence

>Msa0404730

LALVLAPTRELARQVEKEFKDAAPNLEIISLYGGMPIQQQISKLGSGVDIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPSKRQTLMFSATMPSWIKNLTRNYLNKPLTIDLEHAKGGKCIVFTQTKRDADRLSHIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTIERDVGCKFTELPKIAVESGSADMFGSTSSGRYGSSGGRDRRSSSSSGSGRNGYGKSSGFGGSSSRKSGGGFEEFSGKTDKYGGGGFSSSSRSSGFGKFSSGKSGRYGDRN*