AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0450690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450690 MtrunA17_Chr3g0095031 86.936 421 18 2 7 390 138 558 0.0 722
Msa0450690 MtrunA17_Chr5g0442191 69.184 331 65 3 7 300 129 459 1.47e-161 466
Msa0450690 MtrunA17_Chr7g0271121 58.485 330 98 2 7 297 154 483 6.25e-123 372
Msa0450690 MtrunA17_Chr1g0193491 50.829 362 126 5 7 320 162 519 1.68e-113 345
Msa0450690 MtrunA17_Chr1g0204391 42.857 301 130 6 29 291 138 434 1.00e-66 221
Msa0450690 MtrunA17_Chr6g0475251 40.122 329 147 7 6 288 150 474 1.19e-64 218
Msa0450690 MtrunA17_Chr3g0107851 37.861 346 160 7 7 306 165 501 1.01e-62 210
Msa0450690 MtrunA17_Chr1g0176041 36.443 343 172 6 29 325 232 574 2.78e-61 207
Msa0450690 MtrunA17_Chr3g0121351 38.384 297 139 6 29 281 224 520 1.09e-59 203
Msa0450690 MtrunA17_Chr4g0076491 39.130 322 135 6 29 300 363 673 9.90e-59 202
Msa0450690 MtrunA17_Chr5g0409981 38.614 303 142 6 7 265 150 452 1.17e-58 199
Msa0450690 MtrunA17_Chr6g0449741 38.941 321 135 6 29 300 325 633 1.73e-58 201
Msa0450690 MtrunA17_Chr4g0063551 36.127 346 174 6 29 327 224 569 8.67e-58 199
Msa0450690 MtrunA17_Chr2g0277821 38.380 284 138 4 29 275 577 860 2.14e-56 199
Msa0450690 MtrunA17_Chr2g0330401 35.103 339 172 7 29 330 169 496 5.42e-55 189
Msa0450690 MtrunA17_Chr6g0449911 37.363 273 134 4 29 265 237 508 1.24e-54 191
Msa0450690 MtrunA17_Chr2g0299681 37.838 296 150 4 31 292 111 406 1.56e-54 185
Msa0450690 MtrunA17_Chr8g0342861 36.824 296 153 4 31 292 111 406 1.59e-52 180
Msa0450690 MtrunA17_Chr2g0293631 36.755 302 154 4 7 271 544 845 2.32e-52 187
Msa0450690 MtrunA17_Chr2g0329931 36.688 308 156 5 31 304 111 413 2.63e-52 179
Msa0450690 MtrunA17_Chr2g0297261 33.750 320 176 5 7 292 82 399 1.89e-51 177
Msa0450690 MtrunA17_Chr4g0070981 36.213 301 158 4 31 297 111 411 1.94e-51 177
Msa0450690 MtrunA17_Chr1g0200181 36.268 284 143 7 29 274 221 504 4.60e-51 180
Msa0450690 MtrunA17_Chr7g0236841 34.579 321 174 5 7 292 58 377 8.31e-51 176
Msa0450690 MtrunA17_Chr6g0483491 34.579 321 174 5 7 292 58 377 1.45e-50 175
Msa0450690 MtrunA17_Chr7g0270131 35.540 287 149 4 25 275 301 587 4.21e-50 180
Msa0450690 MtrunA17_Chr1g0157691 34.169 319 164 9 1 274 189 506 1.14e-49 176
Msa0450690 MtrunA17_Chr7g0247181 34.014 294 162 5 31 292 210 503 3.95e-49 173
Msa0450690 MtrunA17_Chr7g0247221 34.014 294 162 5 31 292 213 506 6.09e-49 173
Msa0450690 MtrunA17_Chr3g0098121 35.938 320 167 6 7 288 200 519 7.59e-49 176
Msa0450690 MtrunA17_Chr7g0247191 32.615 325 171 7 7 292 198 513 8.52e-49 172
Msa0450690 MtrunA17_Chr2g0300291 36.271 295 150 5 32 288 215 509 3.46e-48 174
Msa0450690 MtrunA17_Chr2g0310581 35.959 292 146 5 30 281 122 412 5.37e-42 154
Msa0450690 MtrunA17_Chr4g0040761 32.226 301 168 5 1 265 61 361 2.60e-40 152
Msa0450690 MtrunA17_Chr3g0114081 30.530 321 161 7 7 267 64 382 2.52e-39 147
Msa0450690 MtrunA17_Chr1g0149251 30.820 305 156 9 7 266 12 306 2.52e-38 140
Msa0450690 MtrunA17_Chr4g0058591 33.716 261 135 6 7 229 250 510 1.45e-37 142
Msa0450690 MtrunA17_Chr4g0003441 30.000 320 175 9 20 293 162 478 2.52e-37 140
Msa0450690 MtrunA17_Chr6g0461751 30.816 331 177 10 27 318 213 530 2.33e-35 136
Msa0450690 MtrunA17_Chr8g0347161 32.381 315 158 10 7 268 150 462 1.49e-34 134
Msa0450690 MtrunA17_Chr6g0466611 32.168 286 147 7 24 263 214 498 8.03e-34 133
Msa0450690 MtrunA17_Chr8g0347151 30.990 313 165 10 7 268 249 561 3.59e-33 131
Msa0450690 MtrunA17_Chr4g0062301 29.967 307 165 9 7 267 145 447 7.11e-33 129
Msa0450690 MtrunA17_Chr2g0307471 30.164 305 166 8 7 267 139 440 2.83e-32 127
Msa0450690 MtrunA17_Chr8g0347171 31.329 316 160 10 7 268 208 520 2.93e-31 125
Msa0450690 MtrunA17_Chr8g0386451 29.393 313 170 8 7 268 336 648 2.41e-30 123
Msa0450690 MtrunA17_Chr2g0309551 26.901 342 168 8 31 290 195 536 3.37e-30 121
Msa0450690 MtrunA17_Chr7g0263771 28.758 306 173 9 31 297 204 503 1.04e-29 120
Msa0450690 MtrunA17_Chr1g0169331 27.928 333 167 9 31 292 61 391 3.26e-29 117
Msa0450690 MtrunA17_Chr5g0429221 28.188 298 176 6 30 292 76 370 1.78e-24 103
Msa0450690 MtrunA17_Chr8g0342851 28.814 295 152 7 31 292 43 312 1.78e-23 99.8
Msa0450690 MtrunA17_Chr1g0179761 25.895 363 182 12 7 297 131 478 3.43e-23 100
Msa0450690 MtrunA17_Chr4g0062321 28.390 236 125 6 37 234 4 233 4.34e-22 94.4
Msa0450690 MtrunA17_Chr5g0443991 27.500 280 156 8 31 267 150 425 5.78e-22 98.2
Msa0450690 MtrunA17_Chr1g0155201 27.711 249 147 8 66 288 1 242 1.21e-21 95.1
Msa0450690 MtrunA17_Chr4g0034411 26.543 324 180 11 7 281 124 438 3.50e-20 92.8
Msa0450690 MtrunA17_Chr3g0145781 26.513 347 181 11 7 283 180 522 3.82e-20 92.0
Msa0450690 MtrunA17_Chr3g0137891 36.552 145 82 4 20 154 18 162 1.33e-19 87.0
Msa0450690 MtrunA17_Chr7g0236831 42.574 101 57 1 167 266 476 576 2.21e-18 87.4
Msa0450690 MtrunA17_Chr7g0236831 35.000 140 62 3 31 141 255 394 1.02e-15 79.0
Msa0450690 MtrunA17_Chr4g0039471 39.844 128 72 2 30 152 292 419 8.21e-18 84.7
Msa0450690 MtrunA17_Chr8g0354761 22.857 315 192 11 7 275 56 365 1.63e-17 84.0
Msa0450690 MtrunA17_Chr3g0137901 33.333 117 71 2 154 266 29 142 3.42e-16 76.3
Msa0450690 MtrunA17_Chr4g0029191 29.670 182 102 6 7 162 93 274 2.05e-15 77.8
Msa0450690 MtrunA17_Chr4g0029191 34.314 102 66 1 195 296 391 491 7.83e-14 73.2
Msa0450690 MtrunA17_Chr2g0301281 29.121 182 103 6 7 162 90 271 3.51e-15 77.4
Msa0450690 MtrunA17_Chr2g0301281 32.000 125 80 3 172 296 369 488 3.39e-14 74.3
Msa0450690 MtrunA17_Chr4g0004301 35.537 121 66 3 168 280 335 451 9.49e-15 75.9
Msa0450690 MtrunA17_Chr5g0434301 35.537 121 66 3 168 280 335 451 3.91e-14 73.9
Msa0450690 MtrunA17_Chr4g0025141 27.014 211 107 6 133 296 15 225 1.69e-13 69.7
Msa0450690 MtrunA17_Chr4g0025101 28.934 197 103 7 126 298 20 203 2.49e-13 68.9
Msa0450690 MtrunA17_Chr8g0364251 32.653 147 94 5 139 282 407 551 1.92e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450690 AT3G22330.1 64.179 335 83 3 7 304 153 487 4.04e-153 446
Msa0450690 AT3G22310.2 62.687 335 88 3 7 304 165 499 4.50e-148 432
Msa0450690 AT3G22310.1 62.687 335 88 3 7 304 165 499 7.15e-148 432
Msa0450690 AT5G26742.3 61.017 295 82 1 27 288 86 380 2.99e-119 360
Msa0450690 AT5G26742.1 61.017 295 82 1 27 288 179 473 2.64e-118 360
Msa0450690 AT5G26742.2 61.017 295 82 1 27 288 179 473 2.71e-118 360
Msa0450690 AT5G62190.1 42.771 332 140 8 6 291 144 471 1.62e-65 221
Msa0450690 AT1G20920.2 37.540 309 153 5 7 275 240 548 3.78e-59 206
Msa0450690 AT1G20920.4 39.085 284 136 4 29 275 603 886 1.42e-58 206
Msa0450690 AT1G20920.6 39.085 284 136 4 29 275 603 886 1.42e-58 206
Msa0450690 AT1G20920.3 39.085 284 136 4 29 275 603 886 1.42e-58 206
Msa0450690 AT1G20920.7 39.085 284 136 4 29 275 603 886 1.42e-58 206
Msa0450690 AT1G20920.5 39.085 284 136 4 29 275 603 886 1.42e-58 206
Msa0450690 AT1G20920.1 39.085 284 136 4 29 275 603 886 1.42e-58 206
Msa0450690 AT5G14610.7 37.584 298 145 6 7 265 79 374 2.37e-58 198
Msa0450690 AT5G14610.3 37.584 298 145 6 7 265 79 374 2.37e-58 198
Msa0450690 AT5G14610.2 37.584 298 145 6 7 265 210 505 3.19e-58 201
Msa0450690 AT5G14610.5 37.584 298 145 6 7 265 218 513 4.69e-58 200
Msa0450690 AT5G14610.6 37.584 298 145 6 7 265 210 505 4.75e-58 200
Msa0450690 AT3G58510.1 35.522 335 174 6 29 321 230 564 9.06e-58 199
Msa0450690 AT3G58510.3 35.522 335 174 6 29 321 230 564 9.06e-58 199
Msa0450690 AT3G58510.2 35.522 335 174 6 29 321 230 564 9.06e-58 199
Msa0450690 AT3G58570.1 36.449 321 160 5 29 305 225 545 1.36e-57 199
Msa0450690 AT5G14610.1 37.584 298 145 6 7 265 278 573 1.38e-57 200
Msa0450690 AT3G01540.4 36.364 308 155 6 7 275 207 512 3.51e-57 197
Msa0450690 AT3G01540.2 36.364 308 155 6 7 275 207 512 3.51e-57 197
Msa0450690 AT3G01540.3 36.364 308 155 6 7 275 207 512 3.51e-57 197
Msa0450690 AT3G01540.1 36.364 308 155 6 7 275 207 512 4.47e-57 197
Msa0450690 AT2G33730.1 40.070 287 122 5 29 265 390 676 2.63e-56 197
Msa0450690 AT1G31970.1 40.132 304 137 8 7 265 163 466 9.84e-56 192
Msa0450690 AT2G42520.2 35.514 321 163 6 29 305 238 558 2.52e-55 192
Msa0450690 AT2G42520.1 35.514 321 163 6 29 305 238 558 2.52e-55 192
Msa0450690 AT2G42520.3 35.514 321 163 6 29 305 238 558 2.52e-55 192
Msa0450690 AT5G63120.2 35.831 307 159 5 7 275 214 520 3.19e-55 191
Msa0450690 AT1G72730.1 37.662 308 153 5 31 304 112 414 3.97e-54 184
Msa0450690 AT1G55150.1 34.835 333 165 6 29 320 173 494 8.06e-54 186
Msa0450690 AT1G51380.1 35.312 320 171 5 7 292 71 388 1.35e-53 182
Msa0450690 AT1G55150.2 34.925 335 166 6 29 322 198 521 2.68e-53 185
Msa0450690 AT3G19760.1 34.062 320 175 5 7 292 84 401 5.95e-53 181
Msa0450690 AT3G13920.4 36.364 308 157 5 31 304 105 407 2.12e-52 180
Msa0450690 AT3G13920.3 36.364 308 157 5 31 304 100 402 2.17e-52 179
Msa0450690 AT3G13920.1 36.364 308 157 5 31 304 110 412 2.19e-52 180
Msa0450690 AT3G06480.1 35.314 303 157 4 7 271 484 785 2.39e-52 188
Msa0450690 AT2G47330.1 36.364 308 157 7 7 275 277 584 8.48e-52 184
Msa0450690 AT3G09620.2 36.426 291 152 8 7 275 446 725 5.71e-51 184
Msa0450690 AT3G09620.1 36.426 291 152 8 7 275 445 724 6.33e-51 184
Msa0450690 AT3G13920.5 37.634 279 140 4 31 275 114 392 7.45e-51 176
Msa0450690 AT3G13920.2 37.634 279 140 4 31 275 110 388 8.15e-51 176
Msa0450690 AT1G54270.2 35.714 308 159 5 31 304 105 407 2.43e-50 174
Msa0450690 AT1G54270.1 35.714 308 159 5 31 304 110 412 2.80e-50 174
Msa0450690 AT1G28180.1 37.918 269 135 4 29 265 50 318 5.81e-50 172
Msa0450690 AT5G60990.1 34.097 349 184 9 25 330 84 429 1.00e-49 174
Msa0450690 AT5G51280.1 34.169 319 164 7 1 274 189 506 3.32e-49 175
Msa0450690 AT1G16280.1 37.910 335 151 12 1 288 101 425 1.57e-48 171
Msa0450690 AT4G16630.1 35.312 320 169 5 7 288 216 535 2.86e-48 175
Msa0450690 AT4G33370.1 34.859 284 147 5 29 274 174 457 5.85e-48 171
Msa0450690 AT2G45810.1 34.680 297 160 7 31 294 225 520 7.43e-48 171
Msa0450690 AT4G00660.1 32.993 294 165 4 31 292 202 495 1.45e-46 166
Msa0450690 AT4G00660.2 32.993 294 165 4 31 292 202 495 1.45e-46 166
Msa0450690 AT3G61240.2 33.898 295 161 6 31 292 195 488 2.93e-46 166
Msa0450690 AT3G61240.1 33.898 295 161 6 31 292 195 488 2.93e-46 166
Msa0450690 AT5G14610.4 35.294 289 141 8 7 256 218 499 9.50e-46 164
Msa0450690 AT1G77030.1 31.894 301 169 5 1 265 71 371 9.36e-41 154
Msa0450690 AT3G06480.2 32.963 270 142 4 7 238 484 752 1.43e-40 153
Msa0450690 AT5G63120.3 34.831 267 136 5 7 235 214 480 1.17e-39 147
Msa0450690 AT5G63120.4 34.831 267 136 5 7 235 214 480 1.17e-39 147
Msa0450690 AT5G63120.5 34.831 267 136 5 7 235 214 480 1.17e-39 147
Msa0450690 AT5G63120.1 34.866 261 132 5 7 229 214 474 1.65e-39 147
Msa0450690 AT1G71370.1 30.619 307 167 7 7 267 65 371 1.72e-39 148
Msa0450690 AT5G05450.1 30.696 316 164 8 7 267 65 380 3.27e-39 148
Msa0450690 AT3G02065.1 32.746 284 154 7 25 272 46 328 1.04e-37 140
Msa0450690 AT3G18600.1 32.343 303 162 9 7 268 138 438 1.94e-37 142
Msa0450690 AT5G11170.2 30.263 304 168 8 31 293 34 334 2.72e-37 138
Msa0450690 AT5G11170.1 29.878 328 184 9 7 293 95 417 4.66e-37 139
Msa0450690 AT5G11200.1 29.878 328 184 9 7 293 95 417 4.66e-37 139
Msa0450690 AT3G02065.3 32.746 284 154 7 25 272 183 465 1.37e-36 139
Msa0450690 AT3G02065.2 32.746 284 154 7 25 272 183 465 1.37e-36 139
Msa0450690 AT5G65900.1 31.646 316 172 10 7 280 203 516 1.95e-35 137
Msa0450690 AT5G08610.1 29.971 347 183 12 7 298 431 772 7.70e-34 134
Msa0450690 AT5G63630.2 29.565 345 187 9 7 298 297 638 7.87e-34 133
Msa0450690 AT5G63630.1 29.446 343 190 8 7 298 103 444 3.65e-33 130
Msa0450690 AT5G08620.1 29.395 347 185 10 7 298 129 470 1.63e-31 125
Msa0450690 AT4G09730.1 30.000 310 163 8 7 263 161 469 2.42e-31 125
Msa0450690 AT1G12770.2 28.280 343 167 8 25 288 188 530 4.58e-30 121
Msa0450690 AT1G12770.1 28.280 343 167 8 25 288 188 530 4.58e-30 121
Msa0450690 AT3G09720.2 26.398 322 197 7 7 292 190 507 3.68e-29 119
Msa0450690 AT3G09720.1 26.398 322 197 7 7 292 190 507 3.68e-29 119
Msa0450690 AT1G63250.1 30.903 288 146 9 30 268 407 690 5.32e-29 119
Msa0450690 AT2G07750.1 30.526 285 151 8 30 268 454 737 6.62e-28 116
Msa0450690 AT1G51380.2 39.355 155 90 2 7 159 71 223 1.80e-25 104
Msa0450690 AT1G71280.2 30.000 250 147 6 7 233 66 310 2.66e-25 105
Msa0450690 AT3G53110.1 28.339 307 166 10 7 263 143 445 3.27e-25 107
Msa0450690 AT1G51380.4 39.355 155 90 2 7 159 71 223 5.43e-25 103
Msa0450690 AT1G51380.3 39.355 155 90 2 7 159 71 223 7.06e-25 103
Msa0450690 AT1G71280.1 29.880 251 148 6 7 234 66 311 9.13e-25 105
Msa0450690 AT3G06980.1 27.000 300 154 10 29 267 452 747 1.18e-18 88.6
Msa0450690 AT4G15850.1 27.604 192 125 3 161 345 330 514 3.46e-18 86.7
Msa0450690 AT5G11200.3 35.526 152 91 4 7 153 95 244 2.47e-17 84.0
Msa0450690 AT5G11200.3 28.966 145 95 3 154 293 317 458 2.83e-14 74.7
Msa0450690 AT5G11200.2 35.256 156 94 4 7 157 95 248 3.09e-17 83.6
Msa0450690 AT5G11200.2 28.966 145 95 3 154 293 335 476 3.95e-14 74.3
Msa0450690 AT4G34910.1 24.841 314 157 6 25 259 117 430 1.11e-16 82.4
Msa0450690 AT3G16840.2 35.000 140 62 3 31 141 283 422 5.81e-16 80.5
Msa0450690 AT3G16840.2 34.783 115 74 1 167 280 504 618 1.01e-15 79.7
Msa0450690 AT3G16840.1 35.000 140 62 3 31 141 282 421 6.02e-16 80.1
Msa0450690 AT3G16840.1 34.783 115 74 1 167 280 503 617 1.04e-15 79.7
Msa0450690 AT2G40700.1 37.615 109 65 2 190 296 373 480 6.77e-15 76.6
Msa0450690 AT2G40700.1 30.128 156 89 3 30 165 107 262 6.17e-14 73.9
Msa0450690 AT1G59990.2 35.593 118 74 2 168 284 426 542 3.16e-13 71.6
Msa0450690 AT1G59990.1 35.593 118 74 2 168 284 426 542 3.52e-13 71.6
Msa0450690 AT2G28600.1 30.065 153 98 5 29 175 197 346 7.58e-11 63.9
Msa0450690 AT1G28180.2 45.070 71 37 1 29 97 50 120 9.06e-11 59.3

Find 151 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAAATAATTAGTCTTTA+TGG 0.084893 3_3:-36807773 Msa0450690:CDS
GGCTGTGACTTTGCTGCTTT+TGG 0.113415 3_3:-36803307 Msa0450690:three_prime_UTR
ACAAATATCTCTGAATTATT+TGG 0.134715 3_3:+36805077 None:intergenic
ACTTCTTGATGGTTTAATTT+TGG 0.135626 3_3:-36803213 Msa0450690:three_prime_UTR
GGAACTGTTTATTGAGAAAA+TGG 0.218184 3_3:-36802591 Msa0450690:three_prime_UTR
CTTTCCTATGGATGGAATTC+AGG 0.226333 3_3:+36803033 None:intergenic
AAACAGCTATTTCAATGTTT+TGG 0.259542 3_3:-36806046 Msa0450690:CDS
TTGCTTATTTGTTGCTGAAT+AGG 0.267190 3_3:+36807743 None:intergenic
AGACTAATTATTTCCAAGTT+AGG 0.275152 3_3:+36807779 None:intergenic
TGGAAATAATTAGTCTTTAT+GGG 0.279985 3_3:-36807772 Msa0450690:CDS
TATGGGAAATCCAGTGGTTT+TGG 0.292126 3_3:-36803506 Msa0450690:CDS
GCACTTACCAGGAGTTAAAA+TGG 0.294440 3_3:+36803247 None:intergenic
ACAAACTGCGTGGTAGATTA+TGG 0.297080 3_3:-36802942 Msa0450690:three_prime_UTR
ACGCCATCTTCACTTCTTGA+TGG 0.301046 3_3:-36803224 Msa0450690:three_prime_UTR
TCTCGGCAACAATGCCTTCT+TGG 0.303539 3_3:-36807526 Msa0450690:CDS
TGGATTTCCCATAGCCATTT+CGG 0.310094 3_3:+36803516 None:intergenic
CCACTTTCAACAGCAATCTT+TGG 0.314583 3_3:+36803629 None:intergenic
GAGATATTTGTTCATCGATC+TGG 0.318649 3_3:-36805065 Msa0450690:CDS
ACCGGGTGTGCCGTCGGCCT+TGG 0.340882 3_3:-36802907 Msa0450690:three_prime_UTR
CTCAATTGTCTTTACATCCC+TGG 0.345874 3_3:+36804983 None:intergenic
GTTGTTACACCTCGTTATAT+AGG 0.347365 3_3:-36802756 Msa0450690:three_prime_UTR
AAGTTTAGCTCAGGTAAATC+TGG 0.349135 3_3:-36803374 Msa0450690:CDS
AATCCCCTTATCACTTGATA+TGG 0.353686 3_3:-36803133 Msa0450690:three_prime_UTR
AATAGCAGTTCCTTTCTTAC+CGG 0.354230 3_3:+36805028 None:intergenic
TTGTTACACCTCGTTATATA+GGG 0.355298 3_3:-36802755 Msa0450690:three_prime_UTR
CAGAGAGAAAGAACTCTTAC+TGG 0.358585 3_3:-36806075 Msa0450690:CDS
TAGTGGTCGATACGGCTCTT+CGG 0.359807 3_3:-36803579 Msa0450690:CDS
CGTCGATCAAGTAGTAGTTC+TGG 0.364601 3_3:-36803545 Msa0450690:CDS
TGATCGTCTATCACATATAA+TGG 0.364977 3_3:-36806145 Msa0450690:CDS
TCAAGTCGTTCCAGTGGCTT+TGG 0.365127 3_3:-36803398 Msa0450690:CDS
GCCTTGGATCTCCTAGGTTC+TGG 0.365170 3_3:+36803327 None:intergenic
CTGGGTGGGTTGTGTTGGAT+TGG 0.372168 3_3:-36802653 Msa0450690:three_prime_UTR
AGTGGTCGATACGGCTCTTC+GGG 0.382018 3_3:-36803578 Msa0450690:CDS
AAGAAGGGATCCTTTGGCTT+TGG 0.386008 3_3:-36807861 Msa0450690:CDS
ATAAGAGTTTGACGCTTAGA+AGG 0.390311 3_3:+36807551 None:intergenic
CTTACAAGATCAATTGTTAA+GGG 0.390668 3_3:+36807470 None:intergenic
GCGTCAAACTCTTATGTTCT+CGG 0.392179 3_3:-36807543 Msa0450690:CDS
ATATCACCATTACTATATAA+AGG 0.399451 3_3:+36802868 None:intergenic
AACTTGTCGTGCAAGTTCTC+TGG 0.403791 3_3:+36807826 None:intergenic
CAAGGACGCTGCACCTAACT+TGG 0.406366 3_3:-36807792 Msa0450690:CDS
TCCTTGTGAGATGATCTTCA+TGG 0.407159 3_3:+36802611 None:intergenic
GATATTGTAGTTGGCACGCC+TGG 0.410806 3_3:-36807704 Msa0450690:CDS
ACTTACAAGATCAATTGTTA+AGG 0.411746 3_3:+36807469 None:intergenic
GGCTTTGGAAAGTTTAGCTC+AGG 0.415998 3_3:-36803383 Msa0450690:CDS
TTTCTCCATATCAAGTGATA+AGG 0.416224 3_3:+36803128 None:intergenic
TAATCTACCACGCAGTTTGT+AGG 0.420443 3_3:+36802945 None:intergenic
TTCTCCATATCAAGTGATAA+GGG 0.422298 3_3:+36803129 None:intergenic
TATCAAGTGATAAGGGGATT+AGG 0.423206 3_3:+36803136 None:intergenic
TGTTCCTTGAAGTATGTAAT+GGG 0.424034 3_3:-36802830 Msa0450690:three_prime_UTR
TAATGGTGATATGTTTCATT+TGG 0.436741 3_3:-36802857 Msa0450690:three_prime_UTR
CAGGAAAAGAAGGGATCCTT+TGG 0.437217 3_3:-36807867 Msa0450690:CDS
TTGATTATGGCAGGAAAAGA+AGG 0.437614 3_3:-36807877 Msa0450690:intron
CCAAAGATTGCTGTTGAAAG+TGG 0.438332 3_3:-36803629 Msa0450690:CDS
GGATCTGGCCGAAATGGCTA+TGG 0.441031 3_3:-36803524 Msa0450690:CDS
TCAGGTAAATCTGGGAGATA+TGG 0.441756 3_3:-36803365 Msa0450690:CDS
CAATTGTTAAGGGTTTGTTT+AGG 0.442345 3_3:+36807480 None:intergenic
GTGTTATTGATCTTCTCAAA+AGG 0.443558 3_3:-36807679 Msa0450690:CDS
AGGTGTAACAACTATATTGC+GGG 0.444313 3_3:+36802767 None:intergenic
GAATGATACATTCTGCTTTG+AGG 0.448716 3_3:-36803093 Msa0450690:three_prime_UTR
AGTGGATCAGCAGACATGTT+TGG 0.451065 3_3:-36803611 Msa0450690:CDS
TTGTTCCTTGAAGTATGTAA+TGG 0.451449 3_3:-36802831 Msa0450690:three_prime_UTR
CAGCAACAAATAAGCAAACT+TGG 0.453404 3_3:-36807737 Msa0450690:CDS
CACTTACCAGGAGTTAAAAT+GGG 0.457426 3_3:+36803248 None:intergenic
AGTTCTGGATCTGGCCGAAA+TGG 0.458244 3_3:-36803530 Msa0450690:CDS
GGCTCTAGTTCAAGGAAGTC+AGG 0.459719 3_3:-36803482 Msa0450690:CDS
GTTCATCGATCTGGACGAAC+AGG 0.460090 3_3:-36805056 Msa0450690:CDS
GAACTTACAAGATCAACATT+TGG 0.460659 3_3:+36805988 None:intergenic
TTTATTGAGAAAATGGAAAC+CGG 0.461223 3_3:-36802584 Msa0450690:three_prime_UTR
ACATTCTGGGTGGGTTGTGT+TGG 0.462857 3_3:-36802658 Msa0450690:three_prime_UTR
TCTGCCCATTACATACTTCA+AGG 0.463013 3_3:+36802826 None:intergenic
AATAATAACAGTTAAAATAG+AGG 0.463106 3_3:-36803274 Msa0450690:three_prime_UTR
ACAGGACGTGCCGGTAAGAA+AGG 0.464924 3_3:-36805038 Msa0450690:CDS
GCCAAGGCCGACGGCACACC+CGG 0.469484 3_3:+36802906 None:intergenic
GCAACTGATGTTGCTTCTCG+TGG 0.472676 3_3:-36806021 Msa0450690:CDS
TAGACGATCAGCATCACGTT+TGG 0.475355 3_3:+36806158 None:intergenic
TGTTATTGATCTTCTCAAAA+GGG 0.475497 3_3:-36807678 Msa0450690:CDS
CACTCCTACTCACTTTCCTA+TGG 0.475805 3_3:+36803021 None:intergenic
TCTGGTAAAACGGATAAATA+CGG 0.481870 3_3:-36803440 Msa0450690:CDS
AAGACAATTGAGAGAGATGT+TGG 0.485650 3_3:-36804972 Msa0450690:CDS
GAAGATGGCGTGCACTTACC+AGG 0.485866 3_3:+36803236 None:intergenic
GGAAATAATTAGTCTTTATG+GGG 0.493886 3_3:-36807771 Msa0450690:CDS
TCAAGTAGTAGTTCTGGATC+TGG 0.495071 3_3:-36803539 Msa0450690:CDS
ACAAGTTGAAAAGGAATTCA+AGG 0.497144 3_3:-36807810 Msa0450690:CDS
TTCACACAGAAAATCAATCC+AGG 0.497254 3_3:-36805001 Msa0450690:CDS
AAAATATGCATCGTACGGGC+TGG 0.509032 3_3:+36802989 None:intergenic
GATACGGCTCTTCGGGAGGT+AGG 0.511083 3_3:-36803571 Msa0450690:CDS
ATATGAATGTTGTCGAGAAC+CGG 0.512716 3_3:-36807978 Msa0450690:CDS
ACGGATAAATACGGTGGTGG+AGG 0.516721 3_3:-36803431 Msa0450690:CDS
GAAAATATATCATTAATTCC+CGG 0.517443 3_3:+36802688 None:intergenic
TCGTTGTTTACATTCTGGGT+GGG 0.518793 3_3:-36802667 Msa0450690:three_prime_UTR
CCTACTCACTTTCCTATGGA+TGG 0.519773 3_3:+36803025 None:intergenic
GTAAGATTCTTTATCCAAGA+AGG 0.527112 3_3:+36807512 None:intergenic
AAGCAGCAAAGTCACAGCCT+TGG 0.529531 3_3:+36803311 None:intergenic
ACTTGCACGACAAGTTGAAA+AGG 0.531541 3_3:-36807819 Msa0450690:CDS
CAACTGATGTTGCTTCTCGT+GGG 0.532954 3_3:-36806020 Msa0450690:CDS
ACTTGATATGGAGAAAGTTA+CGG 0.536080 3_3:-36803121 Msa0450690:three_prime_UTR
CTCTGATAGGAACATGCTAA+AGG 0.538109 3_3:-36806207 Msa0450690:intron
AAACCATCAAGAAGTGAAGA+TGG 0.540818 3_3:+36803221 None:intergenic
ATACGGCTCTTCGGGAGGTA+GGG 0.545873 3_3:-36803570 Msa0450690:CDS
TTCGTTGTTTACATTCTGGG+TGG 0.546043 3_3:-36802668 Msa0450690:three_prime_UTR
TTATGGTTCTGAACATGCAC+CGG 0.549735 3_3:-36802925 Msa0450690:three_prime_UTR
GAGCAACCTTTATATAGTAA+TGG 0.555784 3_3:-36802874 Msa0450690:three_prime_UTR
CAAATAAGCAAACTTGGTAG+TGG 0.556602 3_3:-36807731 Msa0450690:CDS
AGAAGATCAATAACACGTCC+AGG 0.558404 3_3:+36807686 None:intergenic
TTCAAGATTGCCAAGGCCGA+CGG 0.560617 3_3:+36802897 None:intergenic
ACATGCACCGGGTGTGCCGT+CGG 0.564643 3_3:-36802913 Msa0450690:three_prime_UTR
AGTTTAGCTCAGGTAAATCT+GGG 0.566547 3_3:-36803373 Msa0450690:CDS
GATCTGGCCGAAATGGCTAT+GGG 0.570071 3_3:-36803523 Msa0450690:CDS
AGCATGAGTAGTGGTCGATA+CGG 0.571117 3_3:-36803587 Msa0450690:CDS
TCATCCTGAATTCCATCCAT+AGG 0.573914 3_3:-36803037 Msa0450690:three_prime_UTR
AGAAATTAAAGCCAGAACCT+AGG 0.580490 3_3:-36803338 Msa0450690:exon
AGTGGCGTAGATATTGTAGT+TGG 0.581207 3_3:-36807713 Msa0450690:CDS
GTTATTGATCTTCTCAAAAG+GGG 0.583997 3_3:-36807677 Msa0450690:CDS
TGTCGTGCAAGTTCTCTGGT+TGG 0.584435 3_3:+36807830 None:intergenic
ATTAAATGCGAGGCCTTGCA+TGG 0.587294 3_3:-36806114 Msa0450690:CDS
GCTAAACTTTCCAAAGCCAC+TGG 0.588118 3_3:+36803388 None:intergenic
AAGGGGCTCACTGAAACTGA+AGG 0.594694 3_3:-36807660 Msa0450690:CDS
TAACACAAAAGAAAATGGCA+TGG 0.595167 3_3:-36808038 None:intergenic
CTAGTTCAAGGAAGTCAGGA+GGG 0.596259 3_3:-36803478 Msa0450690:CDS
AGCAGTTCAAGTCGTTCCAG+TGG 0.601225 3_3:-36803404 Msa0450690:CDS
ACTAGAGCCACCAAAACCAC+TGG 0.602513 3_3:+36803496 None:intergenic
TGATAGGAACATGCTAAAGG+AGG 0.604402 3_3:-36806204 Msa0450690:intron
TCTGGACGAACAGGACGTGC+CGG 0.607192 3_3:-36805047 Msa0450690:CDS
TGATTATGGCAGGAAAAGAA+GGG 0.607235 3_3:-36807876 Msa0450690:intron
TCTCCATATCAAGTGATAAG+GGG 0.607836 3_3:+36803130 None:intergenic
TATGGTTCTGAACATGCACC+GGG 0.611573 3_3:-36802924 Msa0450690:three_prime_UTR
AGTAGGATTTCAAGAAGCGG+TGG 0.614756 3_3:-36807594 Msa0450690:CDS
TTGTGAAATATCTCCATGCA+AGG 0.620343 3_3:+36806101 None:intergenic
AAAACGGATAAATACGGTGG+TGG 0.622200 3_3:-36803434 Msa0450690:CDS
GCTGATCAGATGCTTCAAGT+AGG 0.623573 3_3:-36807611 Msa0450690:CDS
GGTGCTAACACCAAAGCCAA+AGG 0.626475 3_3:+36807851 None:intergenic
GAAATAATTAGTCTTTATGG+GGG 0.630072 3_3:-36807770 Msa0450690:CDS
GGTCGATACGGCTCTTCGGG+AGG 0.630819 3_3:-36803575 Msa0450690:CDS
GTCACAGCCTTGGATCTCCT+AGG 0.631570 3_3:+36803321 None:intergenic
GCTTGAAGTTATACTAGATG+AGG 0.633346 3_3:+36803165 None:intergenic
AGTTCAAGGAAGTCAGGAGG+GGG 0.635455 3_3:-36803476 Msa0450690:CDS
GTTGCTCTTCAAGATTGCCA+AGG 0.637000 3_3:+36802890 None:intergenic
GCCAGAACCTAGGAGATCCA+AGG 0.637533 3_3:-36803328 Msa0450690:three_prime_UTR
ATGTTTGGCAGCATGAGTAG+TGG 0.644388 3_3:-36803596 Msa0450690:CDS
CCATCCATAGGAAAGTGAGT+AGG 0.648584 3_3:-36803025 Msa0450690:three_prime_UTR
TCACACAGAAAATCAATCCA+GGG 0.653560 3_3:-36805000 Msa0450690:CDS
TCTAGTTCAAGGAAGTCAGG+AGG 0.658828 3_3:-36803479 Msa0450690:CDS
AATGGCTATGGGAAATCCAG+TGG 0.659955 3_3:-36803512 Msa0450690:CDS
TCAAGTAGGATTTCAAGAAG+CGG 0.666197 3_3:-36807597 Msa0450690:CDS
GCCATGAAGATCATCTCACA+AGG 0.682401 3_3:-36802612 Msa0450690:three_prime_UTR
TAGTTCAAGGAAGTCAGGAG+GGG 0.687822 3_3:-36803477 Msa0450690:CDS
GAGGTGTAACAACTATATTG+CGG 0.703613 3_3:+36802766 None:intergenic
GAGAATTTCCCTATATAACG+AGG 0.709929 3_3:+36802747 None:intergenic
GGTAAAACGGATAAATACGG+TGG 0.734116 3_3:-36803437 Msa0450690:CDS
ACGATCTCCTACAAACTGCG+TGG 0.740491 3_3:-36802952 Msa0450690:three_prime_UTR
TGTTGGATGTAAATTCACAG+AGG 0.780436 3_3:-36804955 Msa0450690:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATAATATATTTTTTT+TGG + chr3_3:36804075-36804094 None:intergenic 0.0%
!!! TAAGCATTTTTAAAAAATAT+AGG - chr3_3:36803482-36803501 Msa0450690:CDS 10.0%
!!! TATATTTTGATTATATTTGT+GGG - chr3_3:36803570-36803589 Msa0450690:CDS 10.0%
!!! ATATAATATATTTTTTTTGG+TGG + chr3_3:36804072-36804091 None:intergenic 10.0%
!!! AATTTTTTTGTTGTTGATTA+TGG - chr3_3:36802637-36802656 Msa0450690:three_prime_UTR 15.0%
!! TCTGAATAAAAAATATCATT+TGG + chr3_3:36803130-36803149 None:intergenic 15.0%
!!! TTAATTAGATTTTTTCTTGA+TGG + chr3_3:36803238-36803257 None:intergenic 15.0%
!! TAATTTAAAAAAATGGTGTA+GGG + chr3_3:36803284-36803303 None:intergenic 15.0%
!! TTAATTTAAAAAAATGGTGT+AGG + chr3_3:36803285-36803304 None:intergenic 15.0%
!!! ACACCATTTTTTTAAATTAA+AGG - chr3_3:36803285-36803304 Msa0450690:three_prime_UTR 15.0%
!!! GTACCTTTAATTTAAAAAAA+TGG + chr3_3:36803291-36803310 None:intergenic 15.0%
!!! GTATATTTTGATTATATTTG+TGG - chr3_3:36803569-36803588 Msa0450690:CDS 15.0%
!!! AAACTAAAATTTCTTTTGAA+GGG + chr3_3:36803616-36803635 None:intergenic 15.0%
!!! TAAACTAAAATTTCTTTTGA+AGG + chr3_3:36803617-36803636 None:intergenic 15.0%
!!! TTATATTTTCTCATGATTTT+TGG - chr3_3:36804086-36804105 Msa0450690:intron 15.0%
!!! TATATTTTCTCATGATTTTT+GGG - chr3_3:36804087-36804106 Msa0450690:intron 15.0%
!! ATTTATATTATGAAAGCTAA+AGG + chr3_3:36806038-36806057 None:intergenic 15.0%
!!! TTTAGCTTTCATAATATAAA+TGG - chr3_3:36806037-36806056 Msa0450690:CDS 15.0%
!! TACTATTACGAAAATAAAAT+TGG + chr3_3:36806171-36806190 None:intergenic 15.0%
!!! CTATTTTAACTGTTATTATT+TGG + chr3_3:36807253-36807272 None:intergenic 15.0%
!! AATAATAACAGTTAAAATAG+AGG - chr3_3:36807253-36807272 Msa0450690:intron 15.0%
!!! TTGGAAATAATTAGTCTTTA+TGG - chr3_3:36802754-36802773 Msa0450690:three_prime_UTR 20.0%
!!! TGGAAATAATTAGTCTTTAT+GGG - chr3_3:36802755-36802774 Msa0450690:three_prime_UTR 20.0%
!!! TAAGTATACAAATCTGTTTT+GGG - chr3_3:36803076-36803095 Msa0450690:three_prime_UTR 20.0%
!! TAATTAACAAAATCTTCTTG+AGG - chr3_3:36803251-36803270 Msa0450690:three_prime_UTR 20.0%
!!! TGTTTCGATAAATATTTTTC+TGG - chr3_3:36803643-36803662 Msa0450690:intron 20.0%
!! TGAGATTTGATGTATATATT+AGG - chr3_3:36803844-36803863 Msa0450690:intron 20.0%
!! ATTTGATGTATATATTAGGT+TGG - chr3_3:36803848-36803867 Msa0450690:intron 20.0%
!!! CCATATTATATATTTTCTCA+CGG - chr3_3:36803973-36803992 Msa0450690:intron 20.0%
!!! TAATATATTTTTTTTGGTGG+TGG + chr3_3:36804069-36804088 None:intergenic 20.0%
!! GGAAAGTTCAAATTAAATAA+AGG + chr3_3:36804794-36804813 None:intergenic 20.0%
!! CAAATAAGAAACAACTTAAA+AGG + chr3_3:36804856-36804875 None:intergenic 20.0%
!!! TTTAAGTTGTTTCTTATTTG+AGG - chr3_3:36804856-36804875 Msa0450690:intron 20.0%
!! ATAAATTGCTGTAATTTGAT+TGG + chr3_3:36804984-36805003 None:intergenic 20.0%
!! TAGATTTGCAATTAATACAA+TGG + chr3_3:36805109-36805128 None:intergenic 20.0%
!! TGTATTAATTGCAAATCTAT+TGG - chr3_3:36805110-36805129 Msa0450690:intron 20.0%
!!! ATTATGTGATTATTTGACTT+TGG - chr3_3:36805398-36805417 Msa0450690:intron 20.0%
!! ACAAATATCTCTGAATTATT+TGG + chr3_3:36805453-36805472 None:intergenic 20.0%
!!! AACAATCATTATATTTTACC+AGG - chr3_3:36805780-36805799 Msa0450690:intron 20.0%
!!! ACAATCATTATATTTTACCA+GGG - chr3_3:36805781-36805800 Msa0450690:intron 20.0%
!!! AGTTTTATTCATTCTCAAAA+AGG + chr3_3:36806102-36806121 None:intergenic 20.0%
!! GAGAATGAATAAAACTTTAT+CGG - chr3_3:36806106-36806125 Msa0450690:CDS 20.0%
!! AATTATACTTTGTAAGCTAT+TGG - chr3_3:36806226-36806245 Msa0450690:intron 20.0%
!! TATAATTGTGTAATGACTAA+CGG - chr3_3:36806844-36806863 Msa0450690:intron 20.0%
!! ATATCACCATTACTATATAA+AGG + chr3_3:36807662-36807681 None:intergenic 20.0%
!!! AGATACAACATTTTAGAAAT+AGG - chr3_3:36807723-36807742 Msa0450690:CDS 20.0%
!! GAAAATATATCATTAATTCC+CGG + chr3_3:36807842-36807861 None:intergenic 20.0%
! AGACTAATTATTTCCAAGTT+AGG + chr3_3:36802751-36802770 None:intergenic 25.0%
!!! GGAAATAATTAGTCTTTATG+GGG - chr3_3:36802756-36802775 Msa0450690:three_prime_UTR 25.0%
!!! GAAATAATTAGTCTTTATGG+GGG - chr3_3:36802757-36802776 Msa0450690:three_prime_UTR 25.0%
! TGTTATTGATCTTCTCAAAA+GGG - chr3_3:36802849-36802868 Msa0450690:three_prime_UTR 25.0%
! CTTACAAGATCAATTGTTAA+GGG + chr3_3:36803060-36803079 None:intergenic 25.0%
! ACTTACAAGATCAATTGTTA+AGG + chr3_3:36803061-36803080 None:intergenic 25.0%
!! GTAAGTATACAAATCTGTTT+TGG - chr3_3:36803075-36803094 Msa0450690:three_prime_UTR 25.0%
!! CCAAATAATAAGCTTTTGTT+AGG + chr3_3:36803212-36803231 None:intergenic 25.0%
! CCTAACAAAAGCTTATTATT+TGG - chr3_3:36803209-36803228 Msa0450690:three_prime_UTR 25.0%
! CCGTGAGAAAATATATAATA+TGG + chr3_3:36803976-36803995 None:intergenic 25.0%
!!! AAACAGCTATTTCAATGTTT+TGG - chr3_3:36804481-36804500 Msa0450690:intron 25.0%
! CAAATAAAAAATGTTCCTGT+AGG - chr3_3:36804756-36804775 Msa0450690:intron 25.0%
! CAATTAATACAATGGATGAA+TGG + chr3_3:36805101-36805120 None:intergenic 25.0%
!! AATTCAATTCGTGAAGTATT+CGG - chr3_3:36805136-36805155 Msa0450690:intron 25.0%
! AATAACAAATTGAGTAGCAA+CGG + chr3_3:36805381-36805400 None:intergenic 25.0%
! AATATAGGATGCATACAAAA+AGG + chr3_3:36805612-36805631 None:intergenic 25.0%
! TCTATGACATACTAATAACA+TGG + chr3_3:36805751-36805770 None:intergenic 25.0%
! ATTAGTATGTCATAGAATCA+TGG - chr3_3:36805755-36805774 Msa0450690:intron 25.0%
!! CTGGATTTGATTAAGATTTT+CGG + chr3_3:36805852-36805871 None:intergenic 25.0%
! TTCATAATATAAATGGTGAG+TGG - chr3_3:36806044-36806063 Msa0450690:CDS 25.0%
! TCATAATATAAATGGTGAGT+GGG - chr3_3:36806045-36806064 Msa0450690:CDS 25.0%
! GAAAATAAAATTGGCCAATA+TGG + chr3_3:36806162-36806181 None:intergenic 25.0%
! TTTATTGGATAGTTAGTAAG+AGG - chr3_3:36806375-36806394 Msa0450690:intron 25.0%
!!! AGTTCTCATTTTAACCAAAT+TGG - chr3_3:36806588-36806607 Msa0450690:intron 25.0%
! ATCGAATAACAGTTTGATAA+AGG + chr3_3:36806630-36806649 None:intergenic 25.0%
! TCAAACTGTTATTCGATAAA+TGG - chr3_3:36806633-36806652 Msa0450690:intron 25.0%
! CAAACTGTTATTCGATAAAT+GGG - chr3_3:36806634-36806653 Msa0450690:intron 25.0%
!!! ACTTCTTGATGGTTTAATTT+TGG - chr3_3:36807314-36807333 Msa0450690:intron 25.0%
! TAATGGTGATATGTTTCATT+TGG - chr3_3:36807670-36807689 Msa0450690:CDS 25.0%
!!! ACAACATTTTAGAAATAGGT+AGG - chr3_3:36807727-36807746 Msa0450690:CDS 25.0%
!!! CTTTTTTTCTTCTACATTTC+CGG - chr3_3:36807820-36807839 Msa0450690:CDS 25.0%
!!! TTTTTTTCTTCTACATTTCC+GGG - chr3_3:36807821-36807840 Msa0450690:CDS 25.0%
!! TATTTTCGTTGTTTACATTC+TGG - chr3_3:36807855-36807874 Msa0450690:CDS 25.0%
!! ATTTTCGTTGTTTACATTCT+GGG - chr3_3:36807856-36807875 Msa0450690:CDS 25.0%
! TTTATTGAGAAAATGGAAAC+CGG - chr3_3:36807943-36807962 Msa0450690:intron 25.0%
!!! TTTTTGTTGTTGATTATGGC+AGG - chr3_3:36802641-36802660 Msa0450690:three_prime_UTR 30.0%
! ACAAGTTGAAAAGGAATTCA+AGG - chr3_3:36802717-36802736 Msa0450690:three_prime_UTR 30.0%
! TTGCTTATTTGTTGCTGAAT+AGG + chr3_3:36802787-36802806 None:intergenic 30.0%
! GTGTTATTGATCTTCTCAAA+AGG - chr3_3:36802848-36802867 Msa0450690:three_prime_UTR 30.0%
GTTATTGATCTTCTCAAAAG+GGG - chr3_3:36802850-36802869 Msa0450690:three_prime_UTR 30.0%
GTAAGATTCTTTATCCAAGA+AGG + chr3_3:36803018-36803037 None:intergenic 30.0%
! CAATTGTTAAGGGTTTGTTT+AGG + chr3_3:36803050-36803069 None:intergenic 30.0%
ATTTATCCTCAAAAACCCTT+TGG + chr3_3:36803180-36803199 None:intergenic 30.0%
CTGGAACAATTTGAAGAATA+TGG + chr3_3:36803366-36803385 None:intergenic 30.0%
TGCTTAACTCTGCATTTATT+GGG + chr3_3:36803468-36803487 None:intergenic 30.0%
ATGCTTAACTCTGCATTTAT+TGG + chr3_3:36803469-36803488 None:intergenic 30.0%
ATTATATTTGTGGGTTTCAC+TGG - chr3_3:36803579-36803598 Msa0450690:CDS 30.0%
!! AAGAATTCCTGCTTTAGAAT+AGG + chr3_3:36803930-36803949 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG - chr3_3:36804024-36804043 Msa0450690:intron 30.0%
TTAATGATCTATCCTCTGAT+AGG - chr3_3:36804307-36804326 Msa0450690:intron 30.0%
TGATCGTCTATCACATATAA+TGG - chr3_3:36804382-36804401 Msa0450690:intron 30.0%
GAACTTACAAGATCAACATT+TGG + chr3_3:36804542-36804561 None:intergenic 30.0%
ATATATTCTCGAAAGGTCAT+AGG + chr3_3:36804685-36804704 None:intergenic 30.0%
ATCTCGAATATATTCTCGAA+AGG + chr3_3:36804692-36804711 None:intergenic 30.0%
ATTACCTAACTCTAACTAAC+TGG + chr3_3:36804955-36804974 None:intergenic 30.0%
TGCTGTAATTTGATTGGAAT+GGG + chr3_3:36804978-36804997 None:intergenic 30.0%
TTGCTGTAATTTGATTGGAA+TGG + chr3_3:36804979-36804998 None:intergenic 30.0%
TAATACAATGGATGAATGGT+TGG + chr3_3:36805097-36805116 None:intergenic 30.0%
! ATTCAATTCGTGAAGTATTC+GGG - chr3_3:36805137-36805156 Msa0450690:intron 30.0%
ACATTCTACAATTCTCCTAT+AGG - chr3_3:36805216-36805235 Msa0450690:intron 30.0%
AAGCATTCAACAATTCATCA+TGG - chr3_3:36805249-36805268 Msa0450690:intron 30.0%
TTCATAATGTATTACCTGTG+AGG + chr3_3:36805427-36805446 None:intergenic 30.0%
CCACTTCGAGTAAAAAATAT+AGG + chr3_3:36805627-36805646 None:intergenic 30.0%
!!! CCTATATTTTTTACTCGAAG+TGG - chr3_3:36805624-36805643 Msa0450690:intron 30.0%
ATTTATCATGAAACATGAGC+TGG + chr3_3:36805726-36805745 None:intergenic 30.0%
ACAAATGTAAAATAACACCC+TGG + chr3_3:36805801-36805820 None:intergenic 30.0%
ATTTAAGCACAATACTTCAC+TGG + chr3_3:36805906-36805925 None:intergenic 30.0%
!! GAAGTATTGTGCTTAAATTG+AGG - chr3_3:36805908-36805927 Msa0450690:intron 30.0%
ATGCTGGATATTATCTAGAT+CGG - chr3_3:36805961-36805980 Msa0450690:intron 30.0%
! TATTATCTAGATCGGTTCAA+AGG - chr3_3:36805969-36805988 Msa0450690:intron 30.0%
ATGAAAGCTAAAGGTAAAGT+TGG + chr3_3:36806029-36806048 None:intergenic 30.0%
! TACTTGTCCATTTTCCATAT+TGG - chr3_3:36806145-36806164 Msa0450690:CDS 30.0%
AAATTGGCCAATATGGAAAA+TGG + chr3_3:36806155-36806174 None:intergenic 30.0%
AAGATCTTTGTAAGATGTCA+AGG - chr3_3:36806283-36806302 Msa0450690:intron 30.0%
!! CCAACACAGTTTAGAATTTT+TGG + chr3_3:36806315-36806334 None:intergenic 30.0%
CCAAAAATTCTAAACTGTGT+TGG - chr3_3:36806312-36806331 Msa0450690:intron 30.0%
! CTGAAGTTCTCAACTTTTAT+TGG - chr3_3:36806360-36806379 Msa0450690:intron 30.0%
!! TGAGTCTTGTCTCAATTTTT+AGG - chr3_3:36806402-36806421 Msa0450690:intron 30.0%
!! TTGTCTCAATTTTTAGGAAC+TGG - chr3_3:36806408-36806427 Msa0450690:intron 30.0%
GAAGTTATTGAGAATATGCT+CGG + chr3_3:36806475-36806494 None:intergenic 30.0%
TATAAGCATGATACTAGAGT+TGG - chr3_3:36806523-36806542 Msa0450690:intron 30.0%
AGTTGGTTATTATGATCATG+AGG - chr3_3:36806540-36806559 Msa0450690:intron 30.0%
TACATAAAATGACATTCCAC+TGG - chr3_3:36806660-36806679 Msa0450690:intron 30.0%
!! TGAGGAATTTTCTGGTAAAA+CGG - chr3_3:36807077-36807096 Msa0450690:intron 30.0%
TCTGGTAAAACGGATAAATA+CGG - chr3_3:36807087-36807106 Msa0450690:intron 30.0%
TTCTCCATATCAAGTGATAA+GGG + chr3_3:36807401-36807420 None:intergenic 30.0%
TTTCTCCATATCAAGTGATA+AGG + chr3_3:36807402-36807421 None:intergenic 30.0%
ACTTGATATGGAGAAAGTTA+CGG - chr3_3:36807406-36807425 Msa0450690:intron 30.0%
ATCCAAAAATATGCATCGTA+CGG + chr3_3:36807546-36807565 None:intergenic 30.0%
GAGCAACCTTTATATAGTAA+TGG - chr3_3:36807653-36807672 Msa0450690:CDS 30.0%
TTGTTCCTTGAAGTATGTAA+TGG - chr3_3:36807696-36807715 Msa0450690:CDS 30.0%
TGTTCCTTGAAGTATGTAAT+GGG - chr3_3:36807697-36807716 Msa0450690:CDS 30.0%
TTGTTACACCTCGTTATATA+GGG - chr3_3:36807772-36807791 Msa0450690:CDS 30.0%
GGAACTGTTTATTGAGAAAA+TGG - chr3_3:36807936-36807955 Msa0450690:intron 30.0%
CAAAAAACATCAACTTCAAC+CGG + chr3_3:36807965-36807984 None:intergenic 30.0%
ATATGAATGTTGTCGAGAAC+CGG - chr3_3:36802549-36802568 Msa0450690:three_prime_UTR 35.0%
TTTGTCATGTAAAACACAGC+CGG + chr3_3:36802571-36802590 None:intergenic 35.0%
ACATGACAAAACCAAGTTTC+TGG - chr3_3:36802581-36802600 Msa0450690:three_prime_UTR 35.0%
TTGATTATGGCAGGAAAAGA+AGG - chr3_3:36802650-36802669 Msa0450690:three_prime_UTR 35.0%
TGATTATGGCAGGAAAAGAA+GGG - chr3_3:36802651-36802670 Msa0450690:three_prime_UTR 35.0%
CAGCAACAAATAAGCAAACT+TGG - chr3_3:36802790-36802809 Msa0450690:three_prime_UTR 35.0%
CAAATAAGCAAACTTGGTAG+TGG - chr3_3:36802796-36802815 Msa0450690:three_prime_UTR 35.0%
TCAAGTAGGATTTCAAGAAG+CGG - chr3_3:36802930-36802949 Msa0450690:three_prime_UTR 35.0%
ATAAGAGTTTGACGCTTAGA+AGG + chr3_3:36802979-36802998 None:intergenic 35.0%
!! ATACAAATCTGTTTTGGGCA+TGG - chr3_3:36803081-36803100 Msa0450690:three_prime_UTR 35.0%
CTTAACTCTGCATTTATTGG+GGG + chr3_3:36803466-36803485 None:intergenic 35.0%
GCTTAACTCTGCATTTATTG+GGG + chr3_3:36803467-36803486 None:intergenic 35.0%
!!! TTTGGAAGTTTTGCTGTTGT+AGG - chr3_3:36803688-36803707 Msa0450690:intron 35.0%
AGAATAGGCATTAGATGCAA+TGG + chr3_3:36803915-36803934 None:intergenic 35.0%
!! TCTAATGCCTATTCTAAAGC+AGG - chr3_3:36803920-36803939 Msa0450690:intron 35.0%
TGGAGTCTTACTGTTATAAG+AGG + chr3_3:36803956-36803975 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr3_3:36804029-36804048 Msa0450690:intron 35.0%
!!! ATATTTTTTTTGGTGGTGGC+CGG + chr3_3:36804065-36804084 None:intergenic 35.0%
AGTATAGTGACAAGATTGCA+GGG + chr3_3:36804274-36804293 None:intergenic 35.0%
AAGTATAGTGACAAGATTGC+AGG + chr3_3:36804275-36804294 None:intergenic 35.0%
TTGTGAAATATCTCCATGCA+AGG + chr3_3:36804429-36804448 None:intergenic 35.0%
!! CAGCTATTTCAATGTTTTGG+TGG - chr3_3:36804484-36804503 Msa0450690:intron 35.0%
AACTATCCAGAAACAAGGAA+TGG + chr3_3:36804612-36804631 None:intergenic 35.0%
CAATCAACTATCCAGAAACA+AGG + chr3_3:36804617-36804636 None:intergenic 35.0%
!! TGTTTCTGGATAGTTGATTG+AGG - chr3_3:36804617-36804636 Msa0450690:intron 35.0%
TTGTTAACTACATACGACCA+TGG - chr3_3:36804715-36804734 Msa0450690:intron 35.0%
AAAAAATGTTCCTGTAGGTG+TGG - chr3_3:36804761-36804780 Msa0450690:intron 35.0%
AAAAATGTTCCTGTAGGTGT+GGG - chr3_3:36804762-36804781 Msa0450690:intron 35.0%
TTCCAAATATTTGAGCGAGA+AGG - chr3_3:36804810-36804829 Msa0450690:intron 35.0%
TTCCTTCTCGCTCAAATATT+TGG + chr3_3:36804815-36804834 None:intergenic 35.0%
TCTATCGTGAACAACTTTCT+CGG + chr3_3:36805028-36805047 None:intergenic 35.0%
TTCGGGATAAAATTCTTTGC+TGG - chr3_3:36805154-36805173 Msa0450690:intron 35.0%
ATTCTTTGCTGGATATAGCA+CGG - chr3_3:36805165-36805184 Msa0450690:intron 35.0%
GAGATATTTGTTCATCGATC+TGG - chr3_3:36805462-36805481 Msa0450690:intron 35.0%
AATAGCAGTTCCTTTCTTAC+CGG + chr3_3:36805502-36805521 None:intergenic 35.0%
TTCACACAGAAAATCAATCC+AGG - chr3_3:36805526-36805545 Msa0450690:intron 35.0%
TCACACAGAAAATCAATCCA+GGG - chr3_3:36805527-36805546 Msa0450690:intron 35.0%
AAGACAATTGAGAGAGATGT+TGG - chr3_3:36805555-36805574 Msa0450690:intron 35.0%
TGTTGGATGTAAATTCACAG+AGG - chr3_3:36805572-36805591 Msa0450690:intron 35.0%
!! CTAATTTGTTGCTAGACACA+TGG - chr3_3:36805669-36805688 Msa0450690:intron 35.0%
CAGATATAGAAAACACAGAC+TGG + chr3_3:36805871-36805890 None:intergenic 35.0%
ATCTTTAGCAGCTTATATGC+TGG - chr3_3:36805945-36805964 Msa0450690:intron 35.0%
TAATATAAATGGTGAGTGGG+AGG - chr3_3:36806048-36806067 Msa0450690:CDS 35.0%
AATATAAATGGTGAGTGGGA+GGG - chr3_3:36806049-36806068 Msa0450690:CDS 35.0%
GGAAAATGGACAAGTATTAC+TGG + chr3_3:36806141-36806160 None:intergenic 35.0%
GACATCTTACAAAGATCTTC+TGG + chr3_3:36806282-36806301 None:intergenic 35.0%
TGGTTATTATGATCATGAGG+TGG - chr3_3:36806543-36806562 Msa0450690:intron 35.0%
TCAATTGTGTGCTACCAATT+TGG + chr3_3:36806605-36806624 None:intergenic 35.0%
! AAATTGGTAGCACACAATTG+AGG - chr3_3:36806604-36806623 Msa0450690:intron 35.0%
ATAAAATGACATTCCACTGG+TGG - chr3_3:36806663-36806682 Msa0450690:intron 35.0%
GGACATCTATTATTGATCTC+TGG - chr3_3:36806684-36806703 Msa0450690:intron 35.0%
GATTTGACGTTTATCATGCT+GGG + chr3_3:36806764-36806783 None:intergenic 35.0%
TGATTTGACGTTTATCATGC+TGG + chr3_3:36806765-36806784 None:intergenic 35.0%
! CGCTTCTATGCTAACATTTT+AGG - chr3_3:36806803-36806822 Msa0450690:intron 35.0%
! AAGTTTAGCTCAGGTAAATC+TGG - chr3_3:36807153-36807172 Msa0450690:intron 35.0%
! AGTTTAGCTCAGGTAAATCT+GGG - chr3_3:36807154-36807173 Msa0450690:intron 35.0%
AGAAATTAAAGCCAGAACCT+AGG - chr3_3:36807189-36807208 Msa0450690:intron 35.0%
CACTTACCAGGAGTTAAAAT+GGG + chr3_3:36807282-36807301 None:intergenic 35.0%
AAACCATCAAGAAGTGAAGA+TGG + chr3_3:36807309-36807328 None:intergenic 35.0%
GCTTGAAGTTATACTAGATG+AGG + chr3_3:36807365-36807384 None:intergenic 35.0%
TATCAAGTGATAAGGGGATT+AGG + chr3_3:36807394-36807413 None:intergenic 35.0%
AATCCCCTTATCACTTGATA+TGG - chr3_3:36807394-36807413 Msa0450690:intron 35.0%
TCTCCATATCAAGTGATAAG+GGG + chr3_3:36807400-36807419 None:intergenic 35.0%
GAATGATACATTCTGCTTTG+AGG - chr3_3:36807434-36807453 Msa0450690:intron 35.0%
TCCAAAAATATGCATCGTAC+GGG + chr3_3:36807545-36807564 None:intergenic 35.0%
AGGTGTAACAACTATATTGC+GGG + chr3_3:36807763-36807782 None:intergenic 35.0%
GAGGTGTAACAACTATATTG+CGG + chr3_3:36807764-36807783 None:intergenic 35.0%
GTTGTTACACCTCGTTATAT+AGG - chr3_3:36807771-36807790 Msa0450690:CDS 35.0%
GAGAATTTCCCTATATAACG+AGG + chr3_3:36807783-36807802 None:intergenic 35.0%
!! GACAAAACCAAGTTTCTGGT+TGG - chr3_3:36802585-36802604 Msa0450690:three_prime_UTR 40.0%
AGATCTACCAACCAGAAACT+TGG + chr3_3:36802595-36802614 None:intergenic 40.0%
! ACTTGCACGACAAGTTGAAA+AGG - chr3_3:36802708-36802727 Msa0450690:three_prime_UTR 40.0%
AGTGGCGTAGATATTGTAGT+TGG - chr3_3:36802814-36802833 Msa0450690:three_prime_UTR 40.0%
AGAAGATCAATAACACGTCC+AGG + chr3_3:36802844-36802863 None:intergenic 40.0%
GCGTCAAACTCTTATGTTCT+CGG - chr3_3:36802984-36803003 Msa0450690:three_prime_UTR 40.0%
TATTCAGATTGTGCCTAGTC+TGG - chr3_3:36803142-36803161 Msa0450690:three_prime_UTR 40.0%
! TGCCTAGTCTGGTAATGATA+TGG - chr3_3:36803153-36803172 Msa0450690:three_prime_UTR 40.0%
! GCCTAGTCTGGTAATGATAT+GGG - chr3_3:36803154-36803173 Msa0450690:three_prime_UTR 40.0%
! TGGTAATGATATGGGCCAAA+GGG - chr3_3:36803162-36803181 Msa0450690:three_prime_UTR 40.0%
! AGACAGAATGTGCTAGTTTC+TGG + chr3_3:36803385-36803404 None:intergenic 40.0%
AAAAATTCGCCCAGCTACAA+TGG + chr3_3:36803517-36803536 None:intergenic 40.0%
! TTGTAGCTGGGCGAATTTTT+AGG - chr3_3:36803517-36803536 Msa0450690:CDS 40.0%
TGGAGATTCTGATCAGAAGT+TGG - chr3_3:36803868-36803887 Msa0450690:intron 40.0%
TGAGCTTAACTCAGTTGGTT+TGG - chr3_3:36804002-36804021 Msa0450690:intron 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr3_3:36804030-36804049 Msa0450690:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG - chr3_3:36804031-36804050 Msa0450690:intron 40.0%
!!! TATTTTTTTTGGTGGTGGCC+GGG + chr3_3:36804064-36804083 None:intergenic 40.0%
CTTTAGCATGTTCCTATCAG+AGG + chr3_3:36804322-36804341 None:intergenic 40.0%
CTCTGATAGGAACATGCTAA+AGG - chr3_3:36804320-36804339 Msa0450690:intron 40.0%
TGATAGGAACATGCTAAAGG+AGG - chr3_3:36804323-36804342 Msa0450690:intron 40.0%
!! GGCAAAAAGCATTAAATGCG+AGG - chr3_3:36804403-36804422 Msa0450690:intron 40.0%
CAGAGAGAAAGAACTCTTAC+TGG - chr3_3:36804452-36804471 Msa0450690:intron 40.0%
! TCACTTCCATTCCTTGTTTC+TGG - chr3_3:36804603-36804622 Msa0450690:intron 40.0%
TTCTCGAAAGGTCATAGGAA+TGG + chr3_3:36804680-36804699 None:intergenic 40.0%
TAACATTGCCTACACACACT+AGG + chr3_3:36804918-36804937 None:intergenic 40.0%
GTTGCCAGTTAGTTAGAGTT+AGG - chr3_3:36804948-36804967 Msa0450690:intron 40.0%
CTATCGTGAACAACTTTCTC+GGG + chr3_3:36805027-36805046 None:intergenic 40.0%
GGTTGGAATTCAAGGCAAAT+TGG + chr3_3:36805080-36805099 None:intergenic 40.0%
GGATGAATGGTTGGAATTCA+AGG + chr3_3:36805088-36805107 None:intergenic 40.0%
TGCTTAGAAGAAGCTCCTAT+AGG + chr3_3:36805234-36805253 None:intergenic 40.0%
! TTTGACTTTGGTTTCCTCAC+AGG - chr3_3:36805410-36805429 Msa0450690:intron 40.0%
CTCAATTGTCTTTACATCCC+TGG + chr3_3:36805547-36805566 None:intergenic 40.0%
TGGATGTAAATTCACAGAGG+TGG - chr3_3:36805575-36805594 Msa0450690:intron 40.0%
TCATGAAACATGAGCTGGAT+GGG + chr3_3:36805721-36805740 None:intergenic 40.0%
ATCATGAAACATGAGCTGGA+TGG + chr3_3:36805722-36805741 None:intergenic 40.0%
ACTTTGTAAGCTATTGGTGC+TGG - chr3_3:36806232-36806251 Msa0450690:intron 40.0%
CTTACAAAGATCTTCTGGTC+TGG + chr3_3:36806277-36806296 None:intergenic 40.0%
!! CTAAACTGTGTTGGTTTGCT+TGG - chr3_3:36806321-36806340 Msa0450690:intron 40.0%
TGCTTGGAAGTGATCTCAAA+AGG - chr3_3:36806337-36806356 Msa0450690:intron 40.0%
TCAAACAGGTGTGTAAAGCA+TGG + chr3_3:36806444-36806463 None:intergenic 40.0%
CAATAATAGATGTCCACCAG+TGG + chr3_3:36806679-36806698 None:intergenic 40.0%
!! TTGATCTCTGGTGTTGATTG+TGG - chr3_3:36806696-36806715 Msa0450690:intron 40.0%
CCACTTTCAACAGCAATCTT+TGG + chr3_3:36806901-36806920 None:intergenic 40.0%
! CCAAAGATTGCTGTTGAAAG+TGG - chr3_3:36806898-36806917 Msa0450690:intron 40.0%
!! TCAAGTAGTAGTTCTGGATC+TGG - chr3_3:36806988-36807007 Msa0450690:intron 40.0%
TGGATTTCCCATAGCCATTT+CGG + chr3_3:36807014-36807033 None:intergenic 40.0%
! TATGGGAAATCCAGTGGTTT+TGG - chr3_3:36807021-36807040 Msa0450690:intron 40.0%
GGTAAAACGGATAAATACGG+TGG - chr3_3:36807090-36807109 Msa0450690:intron 40.0%
AAAACGGATAAATACGGTGG+TGG - chr3_3:36807093-36807112 Msa0450690:intron 40.0%
TCAGGTAAATCTGGGAGATA+TGG - chr3_3:36807162-36807181 Msa0450690:intron 40.0%
GCACTTACCAGGAGTTAAAA+TGG + chr3_3:36807283-36807302 None:intergenic 40.0%
TAATCTACCACGCAGTTTGT+AGG + chr3_3:36807585-36807604 None:intergenic 40.0%
ACAAACTGCGTGGTAGATTA+TGG - chr3_3:36807585-36807604 Msa0450690:CDS 40.0%
!! TTATGGTTCTGAACATGCAC+CGG - chr3_3:36807602-36807621 Msa0450690:CDS 40.0%
TCTGCCCATTACATACTTCA+AGG + chr3_3:36807704-36807723 None:intergenic 40.0%
TTCGTTGTTTACATTCTGGG+TGG - chr3_3:36807859-36807878 Msa0450690:CDS 40.0%
TCGTTGTTTACATTCTGGGT+GGG - chr3_3:36807860-36807879 Msa0450690:CDS 40.0%
TCCTTGTGAGATGATCTTCA+TGG + chr3_3:36807919-36807938 None:intergenic 40.0%
CAGGAAAAGAAGGGATCCTT+TGG - chr3_3:36802660-36802679 Msa0450690:three_prime_UTR 45.0%
! AAGAAGGGATCCTTTGGCTT+TGG - chr3_3:36802666-36802685 Msa0450690:three_prime_UTR 45.0%
AACTTGTCGTGCAAGTTCTC+TGG + chr3_3:36802704-36802723 None:intergenic 45.0%
GCTGATCAGATGCTTCAAGT+AGG - chr3_3:36802916-36802935 Msa0450690:three_prime_UTR 45.0%
AGTAGGATTTCAAGAAGCGG+TGG - chr3_3:36802933-36802952 Msa0450690:three_prime_UTR 45.0%
AAACTGCAATATCCTCCTGC+TGG + chr3_3:36803107-36803126 None:intergenic 45.0%
GCCCATATCATTACCAGACT+AGG + chr3_3:36803158-36803177 None:intergenic 45.0%
! CTGGTAATGATATGGGCCAA+AGG - chr3_3:36803161-36803180 Msa0450690:three_prime_UTR 45.0%
! TATGGGCCAAAGGGTTTTTG+AGG - chr3_3:36803171-36803190 Msa0450690:three_prime_UTR 45.0%
TGCATTTATTGGGGGAGACA+GGG + chr3_3:36803458-36803477 None:intergenic 45.0%
CCATGTAGACCATTGTAGCT+GGG - chr3_3:36803505-36803524 Msa0450690:CDS 45.0%
TCTGATCAGAAGTTGGCAGA+TGG - chr3_3:36803875-36803894 Msa0450690:intron 45.0%
TAGACGATCAGCATCACGTT+TGG + chr3_3:36804372-36804391 None:intergenic 45.0%
ATTAAATGCGAGGCCTTGCA+TGG - chr3_3:36804413-36804432 Msa0450690:intron 45.0%
! CAACTGATGTTGCTTCTCGT+GGG - chr3_3:36804507-36804526 Msa0450690:intron 45.0%
TCGAAAGGTCATAGGAATGG+AGG + chr3_3:36804677-36804696 None:intergenic 45.0%
AACTACATACGACCATGGTG+TGG - chr3_3:36804720-36804739 Msa0450690:intron 45.0%
AGGAAATATCCCACACCTAC+AGG + chr3_3:36804774-36804793 None:intergenic 45.0%
TGTTCACGATAGACTCACGA+TGG - chr3_3:36805035-36805054 Msa0450690:CDS 45.0%
CATGAGCTGGATGGGATTTA+TGG + chr3_3:36805713-36805732 None:intergenic 45.0%
AGTGGATCAGCAGACATGTT+TGG - chr3_3:36806916-36806935 Msa0450690:intron 45.0%
ATGTTTGGCAGCATGAGTAG+TGG - chr3_3:36806931-36806950 Msa0450690:intron 45.0%
AGCATGAGTAGTGGTCGATA+CGG - chr3_3:36806940-36806959 Msa0450690:intron 45.0%
CGTCGATCAAGTAGTAGTTC+TGG - chr3_3:36806982-36807001 Msa0450690:intron 45.0%
AATGGCTATGGGAAATCCAG+TGG - chr3_3:36807015-36807034 Msa0450690:intron 45.0%
!!! GTTTTGGTGGCTCTAGTTCA+AGG - chr3_3:36807037-36807056 Msa0450690:intron 45.0%
! TCTAGTTCAAGGAAGTCAGG+AGG - chr3_3:36807048-36807067 Msa0450690:intron 45.0%
CTAGTTCAAGGAAGTCAGGA+GGG - chr3_3:36807049-36807068 Msa0450690:intron 45.0%
TAGTTCAAGGAAGTCAGGAG+GGG - chr3_3:36807050-36807069 Msa0450690:intron 45.0%
! GGGGGATTTGAGGAATTTTC+TGG - chr3_3:36807069-36807088 Msa0450690:intron 45.0%
GCTAAACTTTCCAAAGCCAC+TGG + chr3_3:36807142-36807161 None:intergenic 45.0%
!! GGCTTTGGAAAGTTTAGCTC+AGG - chr3_3:36807144-36807163 Msa0450690:intron 45.0%
!!! GCTGTGACTTTGCTGCTTTT+GGG - chr3_3:36807221-36807240 Msa0450690:intron 45.0%
!!! CTGTGACTTTGCTGCTTTTG+GGG - chr3_3:36807222-36807241 Msa0450690:intron 45.0%
!!! AGGAAGCCCATTTTAACTCC+TGG - chr3_3:36807273-36807292 Msa0450690:intron 45.0%
ACGCCATCTTCACTTCTTGA+TGG - chr3_3:36807303-36807322 Msa0450690:intron 45.0%
CACTCCTACTCACTTTCCTA+TGG + chr3_3:36807509-36807528 None:intergenic 45.0%
AAAATATGCATCGTACGGGC+TGG + chr3_3:36807541-36807560 None:intergenic 45.0%
! GCCCGTACGATGCATATTTT+TGG - chr3_3:36807541-36807560 Msa0450690:CDS 45.0%
!! TATGGTTCTGAACATGCACC+GGG - chr3_3:36807603-36807622 Msa0450690:CDS 45.0%
GTTGCTCTTCAAGATTGCCA+AGG + chr3_3:36807640-36807659 None:intergenic 45.0%
GCCATGAAGATCATCTCACA+AGG - chr3_3:36807915-36807934 Msa0450690:intron 45.0%
!!! ATTACTTTATATATTTTTTT+TGG - chr3_3:36803670-36803689 Msa0450690:intron 5.0%
GGTGCTAACACCAAAGCCAA+AGG + chr3_3:36802679-36802698 None:intergenic 50.0%
TGTCGTGCAAGTTCTCTGGT+TGG + chr3_3:36802700-36802719 None:intergenic 50.0%
GATATTGTAGTTGGCACGCC+TGG - chr3_3:36802823-36802842 Msa0450690:three_prime_UTR 50.0%
AAGGGGCTCACTGAAACTGA+AGG - chr3_3:36802867-36802886 Msa0450690:three_prime_UTR 50.0%
TCTCGGCAACAATGCCTTCT+TGG - chr3_3:36803001-36803020 Msa0450690:three_prime_UTR 50.0%
CTGCATTTATTGGGGGAGAC+AGG + chr3_3:36803459-36803478 None:intergenic 50.0%
GCCATGTAGACCATTGTAGC+TGG - chr3_3:36803504-36803523 Msa0450690:CDS 50.0%
CCCAGCTACAATGGTCTACA+TGG + chr3_3:36803508-36803527 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+AGG + chr3_3:36804000-36804019 None:intergenic 50.0%
CCTCGTGAGCTTAACTCAGT+TGG - chr3_3:36803997-36804016 Msa0450690:intron 50.0%
! GCAACTGATGTTGCTTCTCG+TGG - chr3_3:36804506-36804525 Msa0450690:intron 50.0%
CATACGACCATGGTGTGGTA+CGG - chr3_3:36804725-36804744 Msa0450690:intron 50.0%
TACTCAACCGTACCACACCA+TGG + chr3_3:36804735-36804754 None:intergenic 50.0%
CGATAGGACCTAGTGTGTGT+AGG - chr3_3:36804907-36804926 Msa0450690:intron 50.0%
GTTCATCGATCTGGACGAAC+AGG - chr3_3:36805471-36805490 Msa0450690:intron 50.0%
! GCTCGGCAAAGCATTCAAAC+AGG + chr3_3:36806458-36806477 None:intergenic 50.0%
TAGTGGTCGATACGGCTCTT+CGG - chr3_3:36806948-36806967 Msa0450690:intron 50.0%
!! AGTTCTGGATCTGGCCGAAA+TGG - chr3_3:36806997-36807016 Msa0450690:intron 50.0%
GATCTGGCCGAAATGGCTAT+GGG - chr3_3:36807004-36807023 Msa0450690:intron 50.0%
!!! GGGAAATCCAGTGGTTTTGG+TGG - chr3_3:36807024-36807043 Msa0450690:intron 50.0%
ACTAGAGCCACCAAAACCAC+TGG + chr3_3:36807034-36807053 None:intergenic 50.0%
! GGCTCTAGTTCAAGGAAGTC+AGG - chr3_3:36807045-36807064 Msa0450690:intron 50.0%
AGTTCAAGGAAGTCAGGAGG+GGG - chr3_3:36807051-36807070 Msa0450690:intron 50.0%
! ACGGATAAATACGGTGGTGG+AGG - chr3_3:36807096-36807115 Msa0450690:intron 50.0%
AGCAGTTCAAGTCGTTCCAG+TGG - chr3_3:36807123-36807142 Msa0450690:intron 50.0%
TCAAGTCGTTCCAGTGGCTT+TGG - chr3_3:36807129-36807148 Msa0450690:intron 50.0%
AAGCAGCAAAGTCACAGCCT+TGG + chr3_3:36807219-36807238 None:intergenic 50.0%
!!! GGCTGTGACTTTGCTGCTTT+TGG - chr3_3:36807220-36807239 Msa0450690:intron 50.0%
ACGATCTCCTACAAACTGCG+TGG - chr3_3:36807575-36807594 Msa0450690:CDS 50.0%
TTCAAGATTGCCAAGGCCGA+CGG + chr3_3:36807633-36807652 None:intergenic 50.0%
!! ACATTCTGGGTGGGTTGTGT+TGG - chr3_3:36807869-36807888 Msa0450690:intron 50.0%
CAAGGACGCTGCACCTAACT+TGG - chr3_3:36802735-36802754 Msa0450690:three_prime_UTR 55.0%
AAGGTCCGGGGTTCAAATCC+CGG - chr3_3:36804043-36804062 Msa0450690:intron 55.0%
CACTAGGTCCTATCGAGCAC+AGG + chr3_3:36804902-36804921 None:intergenic 55.0%
! ACAGGACGTGCCGGTAAGAA+AGG - chr3_3:36805489-36805508 Msa0450690:intron 55.0%
AGTGGTCGATACGGCTCTTC+GGG - chr3_3:36806949-36806968 Msa0450690:intron 55.0%
ATACGGCTCTTCGGGAGGTA+GGG - chr3_3:36806957-36806976 Msa0450690:intron 55.0%
GGATCTGGCCGAAATGGCTA+TGG - chr3_3:36807003-36807022 Msa0450690:intron 55.0%
GAAGTCAGGAGGGGGATTTG+AGG - chr3_3:36807059-36807078 Msa0450690:intron 55.0%
GCCAGAACCTAGGAGATCCA+AGG - chr3_3:36807199-36807218 Msa0450690:intron 55.0%
GCCTTGGATCTCCTAGGTTC+TGG + chr3_3:36807203-36807222 None:intergenic 55.0%
GTCACAGCCTTGGATCTCCT+AGG + chr3_3:36807209-36807228 None:intergenic 55.0%
GAAGATGGCGTGCACTTACC+AGG + chr3_3:36807294-36807313 None:intergenic 55.0%
!! CTGGGTGGGTTGTGTTGGAT+TGG - chr3_3:36807874-36807893 Msa0450690:intron 55.0%
!! CTGTTTTGGGCATGGCCAGC+AGG - chr3_3:36803089-36803108 Msa0450690:three_prime_UTR 60.0%
! TTTTGGGCATGGCCAGCAGG+AGG - chr3_3:36803092-36803111 Msa0450690:three_prime_UTR 60.0%
CGTGCTCACCTGTGCTCGAT+AGG - chr3_3:36804891-36804910 Msa0450690:intron 60.0%
TCTGGACGAACAGGACGTGC+CGG - chr3_3:36805480-36805499 Msa0450690:intron 60.0%
GATACGGCTCTTCGGGAGGT+AGG - chr3_3:36806956-36806975 Msa0450690:intron 60.0%
GGTGGCCGGGATTTGAACCC+CGG + chr3_3:36804051-36804070 None:intergenic 65.0%
GGTCGATACGGCTCTTCGGG+AGG - chr3_3:36806952-36806971 Msa0450690:intron 65.0%
ACATGCACCGGGTGTGCCGT+CGG - chr3_3:36807614-36807633 Msa0450690:CDS 65.0%
ACCGGGTGTGCCGTCGGCCT+TGG - chr3_3:36807620-36807639 Msa0450690:CDS 75.0%
GCCAAGGCCGACGGCACACC+CGG + chr3_3:36807624-36807643 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 36802503 36808046 36802503 ID=Msa0450690;Name=Msa0450690
chr3_3 mRNA 36802503 36808046 36802503 ID=Msa0450690-mRNA-1;Parent=Msa0450690;Name=Msa0450690-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.5|0.6|0.8|1|1|5|849|390
chr3_3 exon 36802503 36803654 36802503 ID=Msa0450690-mRNA-1:exon:6701;Parent=Msa0450690-mRNA-1
chr3_3 exon 36804956 36805117 36804956 ID=Msa0450690-mRNA-1:exon:6700;Parent=Msa0450690-mRNA-1
chr3_3 exon 36805996 36806220 36805996 ID=Msa0450690-mRNA-1:exon:6699;Parent=Msa0450690-mRNA-1
chr3_3 exon 36807475 36807886 36807475 ID=Msa0450690-mRNA-1:exon:6698;Parent=Msa0450690-mRNA-1
chr3_3 exon 36807976 36808046 36807976 ID=Msa0450690-mRNA-1:exon:6697;Parent=Msa0450690-mRNA-1
chr3_3 CDS 36807976 36808046 36807976 ID=Msa0450690-mRNA-1:cds;Parent=Msa0450690-mRNA-1
chr3_3 CDS 36807475 36807886 36807475 ID=Msa0450690-mRNA-1:cds;Parent=Msa0450690-mRNA-1
chr3_3 CDS 36805996 36806220 36805996 ID=Msa0450690-mRNA-1:cds;Parent=Msa0450690-mRNA-1
chr3_3 CDS 36804956 36805117 36804956 ID=Msa0450690-mRNA-1:cds;Parent=Msa0450690-mRNA-1
chr3_3 CDS 36803352 36803654 36803352 ID=Msa0450690-mRNA-1:cds;Parent=Msa0450690-mRNA-1
chr3_3 three_prime_UTR 36802503 36803351 36802503 ID=Msa0450690-mRNA-1:three_prime_utr;Parent=Msa0450690-mRNA-1
Gene Sequence

>Msa0450690

ATGGCATGGAAAAAACAGGGGAAGACTTTGAATTTTGAAGTCAGTGATATGAATGTTGTCGAGAACCGGCTGAAAAGAAGGGATCCTTTGGCTTTGGTGTTAGCACCAACCAGAGAACTTGCACGACAAGTTGAAAAGGAATTCAAGGACGCTGCACCTAACTTGGAAATAATTAGTCTTTATGGGGGTATGCCTATTCAGCAACAAATAAGCAAACTTGGTAGTGGCGTAGATATTGTAGTTGGCACGCCTGGACGTGTTATTGATCTTCTCAAAAGGGGCTCACTGAAACTGAAGGATGTTAATTATGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTAGGATTTCAAGAAGCGGTGGAGACTATCTTGCAGAAGTTGCCTTCTAAGCGTCAAACTCTTATGTTCTCGGCAACAATGCCTTCTTGGATAAAGAATCTTACGCGCAATTACCTAAACAAACCCTTAACAATTGATCTTGAACATGCTAAAGGAGGAAAGTGTATTGTTTTCACTCAAACCAAACGTGATGCTGATCGTCTATCACATATAATGGCAAAAAGCATTAAATGCGAGGCCTTGCATGGAGATATTTCACAAACTCAGAGAGAAAGAACTCTTACTGGCTTTAGAAACAGCTATTTCAATGTTTTGGTGGCAACTGATGTTGCTTCTCGTGGGCTTGATATACCAAATGTTGATCTTGTAATACATTATGAACTTCCAAATAATTCAGAGATATTTGTTCATCGATCTGGACGAACAGGACGTGCCGGTAAGAAAGGAACTGCTATTCTTGTTCACACAGAAAATCAATCCAGGGATGTAAAGACAATTGAGAGAGATGTTGGATGTAAATTCACAGAGTTACCAAAGATTGCTGTTGAAAGTGGATCAGCAGACATGTTTGGCAGCATGAGTAGTGGTCGATACGGCTCTTCGGGAGGTAGGGATCGTCGATCAAGTAGTAGTTCTGGATCTGGCCGAAATGGCTATGGGAAATCCAGTGGTTTTGGTGGCTCTAGTTCAAGGAAGTCAGGAGGGGGATTTGAGGAATTTTCTGGTAAAACGGATAAATACGGTGGTGGAGGATTTAGCAGTTCAAGTCGTTCCAGTGGCTTTGGAAAGTTTAGCTCAGGTAAATCTGGGAGATATGGTGACAGAAATTAA
Protein sequence

>Msa0450690

MAWKKQGKTLNFEVSDMNVVENRLKRRDPLALVLAPTRELARQVEKEFKDAAPNLEIISLYGGMPIQQQISKLGSGVDIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPSKRQTLMFSATMPSWIKNLTRNYLNKPLTIDLEHAKGGKCIVFTQTKRDADRLSHIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTIERDVGCKFTELPKIAVESGSADMFGSMSSGRYGSSGGRDRRSSSSSGSGRNGYGKSSGFGGSSSRKSGGGFEEFSGKTDKYGGGGFSSSSRSSGFGKFSSGKSGRYGDRN*