Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0407990 | XP_003599013.1 | 95.890 | 511 | 21 | 0 | 1 | 511 | 1 | 511 | 0.0 | 1001 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0407990 | sp|A2SY66|VICHY_VICSN | 83.235 | 507 | 83 | 1 | 6 | 510 | 3 | 509 | 0.0 | 886 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0407990 | G7IZC8 | 95.890 | 511 | 21 | 0 | 1 | 511 | 1 | 511 | 0.0 | 1001 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0407990 | Msa0493570 | 0.824958 | 6.087209e-54 | -8.615850e-47 |
Msa0352110 | Msa0407990 | 0.842101 | 3.175656e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0407990 | MtrunA17_Chr3g0087271 | 95.890 | 511 | 21 | 0 | 1 | 511 | 1 | 511 | 0.0 | 1001 |
Msa0407990 | MtrunA17_Chr3g0087261 | 80.822 | 511 | 97 | 1 | 1 | 511 | 1 | 510 | 0.0 | 872 |
Msa0407990 | MtrunA17_Chr6g0482131 | 55.230 | 478 | 210 | 3 | 37 | 510 | 35 | 512 | 0.0 | 569 |
Msa0407990 | MtrunA17_Chr4g0033311 | 52.838 | 511 | 234 | 4 | 7 | 510 | 5 | 515 | 0.0 | 568 |
Msa0407990 | MtrunA17_Chr2g0329201 | 53.493 | 501 | 227 | 4 | 14 | 510 | 9 | 507 | 0.0 | 567 |
Msa0407990 | MtrunA17_Chr4g0033321 | 52.381 | 504 | 235 | 4 | 10 | 508 | 4 | 507 | 0.0 | 559 |
Msa0407990 | MtrunA17_Chr4g0033201 | 52.372 | 506 | 234 | 5 | 11 | 510 | 8 | 512 | 0.0 | 556 |
Msa0407990 | MtrunA17_Chr4g0033271 | 52.465 | 507 | 231 | 4 | 8 | 510 | 11 | 511 | 0.0 | 556 |
Msa0407990 | MtrunA17_Chr3g0088441 | 51.946 | 514 | 236 | 5 | 7 | 510 | 2 | 514 | 0.0 | 553 |
Msa0407990 | MtrunA17_Chr4g0033401 | 52.079 | 505 | 236 | 4 | 10 | 508 | 4 | 508 | 0.0 | 552 |
Msa0407990 | MtrunA17_Chr2g0329191 | 53.388 | 487 | 224 | 3 | 27 | 510 | 23 | 509 | 0.0 | 549 |
Msa0407990 | MtrunA17_Chr4g0010501 | 51.394 | 502 | 228 | 3 | 11 | 510 | 7 | 494 | 0.0 | 546 |
Msa0407990 | MtrunA17_Chr6g0482081 | 55.136 | 477 | 209 | 3 | 37 | 508 | 35 | 511 | 0.0 | 546 |
Msa0407990 | MtrunA17_Chr4g0033191 | 52.610 | 479 | 223 | 3 | 36 | 510 | 41 | 519 | 0.0 | 544 |
Msa0407990 | MtrunA17_Chr6g0482071 | 52.071 | 507 | 232 | 5 | 8 | 510 | 14 | 513 | 0.0 | 541 |
Msa0407990 | MtrunA17_Chr4g0033341 | 51.149 | 522 | 241 | 6 | 1 | 510 | 24 | 543 | 0.0 | 539 |
Msa0407990 | MtrunA17_Chr4g0033331 | 51.717 | 495 | 234 | 4 | 18 | 508 | 20 | 513 | 0.0 | 537 |
Msa0407990 | MtrunA17_Chr2g0329321 | 50.489 | 511 | 226 | 4 | 3 | 510 | 2 | 488 | 0.0 | 528 |
Msa0407990 | MtrunA17_Chr4g0033261 | 49.216 | 510 | 227 | 4 | 8 | 510 | 9 | 493 | 1.79e-179 | 513 |
Msa0407990 | MtrunA17_Chr4g0043091 | 49.791 | 478 | 235 | 3 | 35 | 508 | 25 | 501 | 6.67e-174 | 499 |
Msa0407990 | MtrunA17_Chr6g0482941 | 50.397 | 504 | 242 | 6 | 9 | 510 | 15 | 512 | 6.36e-173 | 497 |
Msa0407990 | MtrunA17_Chr4g0033231 | 48.750 | 480 | 216 | 3 | 36 | 510 | 39 | 493 | 4.49e-172 | 494 |
Msa0407990 | MtrunA17_Chr6g0482951 | 50.296 | 507 | 238 | 7 | 9 | 510 | 15 | 512 | 1.48e-171 | 494 |
Msa0407990 | MtrunA17_Chr5g0430451 | 48.350 | 515 | 230 | 5 | 8 | 510 | 8 | 498 | 3.67e-169 | 487 |
Msa0407990 | MtrunA17_Chr4g0042171 | 47.817 | 481 | 241 | 6 | 35 | 508 | 21 | 498 | 1.44e-160 | 466 |
Msa0407990 | MtrunA17_Chr3g0090131 | 45.895 | 475 | 244 | 5 | 39 | 511 | 22 | 485 | 2.60e-160 | 464 |
Msa0407990 | MtrunA17_Chr3g0090111 | 44.842 | 475 | 248 | 5 | 39 | 511 | 20 | 482 | 1.85e-157 | 457 |
Msa0407990 | MtrunA17_Chr4g0074561 | 47.146 | 473 | 243 | 4 | 43 | 509 | 40 | 511 | 8.63e-157 | 456 |
Msa0407990 | MtrunA17_Chr2g0288071 | 45.455 | 517 | 263 | 5 | 1 | 510 | 38 | 542 | 9.93e-155 | 452 |
Msa0407990 | MtrunA17_Chr2g0317821 | 45.567 | 485 | 258 | 5 | 28 | 508 | 21 | 503 | 2.70e-152 | 445 |
Msa0407990 | MtrunA17_Chr2g0317841 | 45.155 | 485 | 260 | 5 | 28 | 508 | 21 | 503 | 2.40e-151 | 442 |
Msa0407990 | MtrunA17_Chr7g0242691 | 44.488 | 508 | 261 | 8 | 8 | 510 | 4 | 495 | 9.31e-151 | 441 |
Msa0407990 | MtrunA17_Chr2g0288021 | 45.020 | 502 | 266 | 5 | 11 | 508 | 12 | 507 | 1.47e-150 | 440 |
Msa0407990 | MtrunA17_Chr4g0006971 | 46.122 | 477 | 239 | 8 | 37 | 508 | 26 | 489 | 2.58e-150 | 440 |
Msa0407990 | MtrunA17_Chr4g0074551 | 45.029 | 513 | 267 | 6 | 2 | 510 | 23 | 524 | 2.84e-150 | 441 |
Msa0407990 | MtrunA17_Chr4g0006111 | 45.214 | 491 | 227 | 7 | 35 | 510 | 62 | 525 | 5.34e-149 | 437 |
Msa0407990 | MtrunA17_Chr4g0006131 | 46.307 | 501 | 226 | 10 | 24 | 508 | 26 | 499 | 1.33e-146 | 430 |
Msa0407990 | MtrunA17_Chr7g0242681 | 45.135 | 483 | 244 | 10 | 31 | 508 | 33 | 499 | 7.84e-143 | 421 |
Msa0407990 | MtrunA17_Chr1g0195611 | 43.038 | 474 | 254 | 6 | 38 | 508 | 27 | 487 | 3.47e-136 | 403 |
Msa0407990 | MtrunA17_Chr5g0428831 | 42.029 | 483 | 249 | 7 | 37 | 508 | 26 | 488 | 4.73e-135 | 400 |
Msa0407990 | MtrunA17_Chr2g0301231 | 48.325 | 418 | 177 | 7 | 106 | 510 | 1 | 392 | 8.76e-131 | 385 |
Msa0407990 | MtrunA17_Chr3g0087201 | 51.515 | 330 | 155 | 2 | 180 | 508 | 17 | 342 | 9.89e-124 | 365 |
Msa0407990 | MtrunA17_Chr5g0418871 | 50.450 | 333 | 160 | 3 | 59 | 387 | 4 | 335 | 5.41e-119 | 353 |
Msa0407990 | MtrunA17_Chr1g0195641 | 44.162 | 394 | 205 | 6 | 37 | 425 | 26 | 409 | 5.57e-117 | 350 |
Msa0407990 | MtrunA17_Chr7g0234091 | 41.996 | 481 | 256 | 9 | 35 | 510 | 71 | 533 | 8.95e-114 | 347 |
Msa0407990 | MtrunA17_Chr7g0234111 | 41.754 | 479 | 247 | 8 | 39 | 508 | 76 | 531 | 4.22e-113 | 345 |
Msa0407990 | MtrunA17_Chr7g0234131 | 40.456 | 482 | 259 | 9 | 35 | 508 | 71 | 532 | 8.52e-108 | 331 |
Msa0407990 | MtrunA17_Chr7g0230651 | 42.703 | 370 | 180 | 6 | 96 | 455 | 29 | 376 | 7.53e-96 | 295 |
Msa0407990 | MtrunA17_Chr3g0087191 | 64.138 | 145 | 50 | 1 | 37 | 179 | 21 | 165 | 5.70e-64 | 205 |
Msa0407990 | MtrunA17_Chr7g0227561 | 39.098 | 266 | 132 | 2 | 40 | 305 | 48 | 283 | 2.41e-62 | 206 |
Msa0407990 | MtrunA17_Chr7g0236731 | 44.681 | 235 | 114 | 3 | 128 | 356 | 31 | 255 | 5.13e-55 | 186 |
Msa0407990 | MtrunA17_Chr4g0068871 | 26.651 | 424 | 240 | 10 | 95 | 511 | 176 | 535 | 6.64e-27 | 114 |
Msa0407990 | MtrunA17_Chr8g0352881 | 42.157 | 102 | 58 | 1 | 261 | 362 | 57 | 157 | 2.43e-22 | 93.6 |
Msa0407990 | MtrunA17_Chr5g0418861 | 49.398 | 83 | 41 | 1 | 427 | 508 | 8 | 90 | 1.64e-21 | 89.0 |
Msa0407990 | MtrunA17_Chr2g0288031 | 60.714 | 56 | 22 | 0 | 189 | 244 | 5 | 60 | 2.22e-17 | 76.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0407990 | AT2G44480.1 | 53.459 | 477 | 219 | 2 | 35 | 508 | 32 | 508 | 0.0 | 563 |
Msa0407990 | AT2G44480.3 | 53.459 | 477 | 219 | 2 | 35 | 508 | 63 | 539 | 0.0 | 563 |
Msa0407990 | AT5G44640.1 | 48.497 | 499 | 247 | 5 | 16 | 508 | 7 | 501 | 5.66e-180 | 515 |
Msa0407990 | AT2G44450.1 | 50.211 | 474 | 229 | 3 | 38 | 508 | 31 | 500 | 2.36e-179 | 513 |
Msa0407990 | AT5G42260.1 | 49.000 | 500 | 245 | 5 | 9 | 504 | 4 | 497 | 2.68e-178 | 511 |
Msa0407990 | AT3G60130.1 | 51.883 | 478 | 221 | 5 | 38 | 511 | 30 | 502 | 9.96e-177 | 507 |
Msa0407990 | AT2G25630.1 | 46.906 | 501 | 239 | 6 | 12 | 508 | 6 | 483 | 4.15e-169 | 487 |
Msa0407990 | AT5G54570.1 | 50.104 | 481 | 231 | 5 | 35 | 508 | 27 | 505 | 2.46e-168 | 486 |
Msa0407990 | AT1G26560.1 | 48.225 | 479 | 242 | 4 | 35 | 508 | 29 | 506 | 3.07e-167 | 483 |
Msa0407990 | AT3G18080.1 | 49.478 | 479 | 236 | 4 | 34 | 510 | 35 | 509 | 7.46e-166 | 479 |
Msa0407990 | AT2G44480.2 | 52.709 | 406 | 189 | 2 | 106 | 508 | 1 | 406 | 2.10e-164 | 472 |
Msa0407990 | AT3G18070.3 | 48.000 | 475 | 233 | 5 | 38 | 510 | 30 | 492 | 4.90e-161 | 466 |
Msa0407990 | AT3G18070.1 | 47.789 | 475 | 240 | 5 | 38 | 510 | 30 | 498 | 4.39e-160 | 464 |
Msa0407990 | AT5G24550.1 | 45.079 | 508 | 270 | 7 | 11 | 510 | 5 | 511 | 5.26e-160 | 465 |
Msa0407990 | AT3G60140.1 | 46.584 | 483 | 250 | 7 | 35 | 510 | 23 | 504 | 1.68e-158 | 463 |
Msa0407990 | AT1G47600.2 | 47.639 | 487 | 237 | 8 | 28 | 510 | 38 | 510 | 8.54e-157 | 456 |
Msa0407990 | AT1G47600.1 | 47.844 | 487 | 237 | 9 | 28 | 510 | 38 | 511 | 3.05e-156 | 455 |
Msa0407990 | AT1G61820.1 | 47.346 | 471 | 242 | 4 | 43 | 508 | 35 | 504 | 7.79e-155 | 451 |
Msa0407990 | AT1G51470.1 | 47.228 | 487 | 240 | 9 | 28 | 510 | 38 | 511 | 2.30e-154 | 450 |
Msa0407990 | AT5G24540.1 | 45.472 | 508 | 268 | 7 | 11 | 510 | 5 | 511 | 5.52e-153 | 447 |
Msa0407990 | AT1G02850.2 | 45.684 | 475 | 239 | 7 | 38 | 508 | 26 | 485 | 1.29e-152 | 445 |
Msa0407990 | AT2G32860.2 | 46.737 | 475 | 242 | 7 | 43 | 508 | 99 | 571 | 6.25e-152 | 447 |
Msa0407990 | AT2G32860.1 | 46.737 | 475 | 241 | 8 | 43 | 508 | 99 | 570 | 7.48e-151 | 445 |
Msa0407990 | AT2G44470.3 | 45.342 | 483 | 250 | 9 | 38 | 510 | 29 | 507 | 1.52e-150 | 443 |
Msa0407990 | AT2G44490.1 | 45.342 | 483 | 250 | 9 | 37 | 508 | 13 | 492 | 3.72e-150 | 441 |
Msa0407990 | AT4G27830.1 | 43.590 | 507 | 256 | 9 | 9 | 508 | 1 | 484 | 4.57e-150 | 439 |
Msa0407990 | AT4G21760.2 | 43.898 | 508 | 273 | 7 | 8 | 510 | 23 | 523 | 2.35e-149 | 439 |
Msa0407990 | AT3G60130.2 | 50.962 | 416 | 195 | 5 | 100 | 511 | 40 | 450 | 3.45e-149 | 435 |
Msa0407990 | AT1G61810.1 | 44.898 | 490 | 260 | 5 | 28 | 508 | 19 | 507 | 3.85e-149 | 437 |
Msa0407990 | AT3G60120.1 | 45.322 | 481 | 254 | 8 | 37 | 510 | 13 | 491 | 3.32e-148 | 436 |
Msa0407990 | AT1G02850.5 | 43.775 | 498 | 238 | 8 | 38 | 508 | 26 | 508 | 4.83e-148 | 434 |
Msa0407990 | AT5G25980.2 | 44.874 | 517 | 270 | 12 | 1 | 508 | 12 | 522 | 1.61e-147 | 434 |
Msa0407990 | AT1G02850.4 | 43.687 | 499 | 238 | 9 | 38 | 508 | 26 | 509 | 3.71e-146 | 429 |
Msa0407990 | AT1G61810.3 | 45.073 | 477 | 252 | 5 | 28 | 495 | 19 | 494 | 5.23e-145 | 427 |
Msa0407990 | AT5G54570.3 | 49.415 | 427 | 208 | 4 | 35 | 455 | 27 | 451 | 1.08e-144 | 423 |
Msa0407990 | AT5G36890.2 | 43.552 | 473 | 252 | 6 | 40 | 508 | 18 | 479 | 6.16e-144 | 422 |
Msa0407990 | AT5G36890.1 | 43.552 | 473 | 252 | 6 | 40 | 508 | 18 | 479 | 6.51e-144 | 422 |
Msa0407990 | AT4G27820.1 | 44.742 | 485 | 241 | 8 | 32 | 508 | 17 | 482 | 1.30e-143 | 422 |
Msa0407990 | AT5G54570.2 | 50.244 | 410 | 195 | 5 | 106 | 508 | 1 | 408 | 3.23e-143 | 419 |
Msa0407990 | AT3G60130.3 | 50.000 | 416 | 188 | 6 | 100 | 511 | 40 | 439 | 3.76e-142 | 417 |
Msa0407990 | AT5G26000.1 | 44.015 | 518 | 273 | 11 | 1 | 508 | 1 | 511 | 8.61e-142 | 419 |
Msa0407990 | AT4G21760.1 | 42.717 | 508 | 269 | 8 | 8 | 510 | 23 | 513 | 4.95e-141 | 417 |
Msa0407990 | AT1G02850.1 | 43.789 | 475 | 221 | 8 | 38 | 508 | 26 | 458 | 6.97e-141 | 414 |
Msa0407990 | AT2G44460.1 | 45.816 | 478 | 250 | 8 | 38 | 508 | 29 | 504 | 7.49e-140 | 416 |
Msa0407990 | AT4G22100.1 | 41.865 | 504 | 263 | 8 | 9 | 508 | 5 | 482 | 8.97e-139 | 410 |
Msa0407990 | AT3G21370.1 | 42.593 | 486 | 265 | 9 | 37 | 511 | 32 | 514 | 2.84e-137 | 407 |
Msa0407990 | AT2G44480.4 | 59.105 | 313 | 125 | 2 | 35 | 345 | 63 | 374 | 3.46e-137 | 402 |
Msa0407990 | AT1G45191.4 | 43.644 | 472 | 248 | 6 | 38 | 508 | 29 | 483 | 5.34e-137 | 405 |
Msa0407990 | AT1G75940.1 | 43.621 | 486 | 260 | 9 | 38 | 511 | 37 | 520 | 8.69e-137 | 406 |
Msa0407990 | AT1G52400.3 | 44.124 | 485 | 249 | 10 | 38 | 508 | 39 | 515 | 8.84e-137 | 406 |
Msa0407990 | AT1G52400.1 | 44.124 | 485 | 249 | 10 | 38 | 508 | 39 | 515 | 8.84e-137 | 406 |
Msa0407990 | AT3G03640.1 | 43.967 | 489 | 256 | 10 | 35 | 510 | 31 | 514 | 1.13e-136 | 405 |
Msa0407990 | AT3G62750.2 | 41.765 | 510 | 258 | 10 | 5 | 508 | 23 | 499 | 3.15e-136 | 404 |
Msa0407990 | AT1G45191.6 | 43.816 | 477 | 251 | 8 | 38 | 508 | 29 | 494 | 5.00e-136 | 404 |
Msa0407990 | AT3G62750.1 | 41.948 | 503 | 253 | 10 | 12 | 508 | 4 | 473 | 5.76e-136 | 402 |
Msa0407990 | AT1G45191.2 | 43.552 | 473 | 253 | 7 | 38 | 508 | 29 | 489 | 5.90e-136 | 403 |
Msa0407990 | AT1G66280.1 | 42.773 | 512 | 279 | 9 | 8 | 511 | 8 | 513 | 1.26e-135 | 403 |
Msa0407990 | AT3G09260.1 | 42.857 | 483 | 263 | 8 | 38 | 511 | 35 | 513 | 3.53e-135 | 402 |
Msa0407990 | AT1G45191.1 | 42.975 | 484 | 257 | 7 | 38 | 508 | 29 | 506 | 1.19e-134 | 400 |
Msa0407990 | AT1G60090.2 | 42.050 | 478 | 251 | 7 | 38 | 508 | 24 | 482 | 8.70e-133 | 395 |
Msa0407990 | AT1G66270.1 | 42.400 | 500 | 272 | 10 | 21 | 511 | 21 | 513 | 1.76e-132 | 395 |
Msa0407990 | AT1G60090.1 | 41.580 | 481 | 256 | 7 | 38 | 508 | 24 | 489 | 6.07e-132 | 393 |
Msa0407990 | AT5G28510.1 | 40.805 | 522 | 285 | 11 | 9 | 511 | 6 | 522 | 1.81e-131 | 392 |
Msa0407990 | AT5G24540.2 | 45.011 | 451 | 240 | 6 | 11 | 454 | 5 | 454 | 6.53e-130 | 385 |
Msa0407990 | AT1G66270.2 | 42.200 | 500 | 271 | 11 | 21 | 511 | 21 | 511 | 1.22e-129 | 387 |
Msa0407990 | AT5G25980.3 | 44.156 | 462 | 245 | 10 | 1 | 455 | 12 | 467 | 2.66e-129 | 384 |
Msa0407990 | AT5G25980.1 | 44.156 | 462 | 245 | 10 | 1 | 455 | 12 | 467 | 2.66e-129 | 384 |
Msa0407990 | AT3G62740.1 | 40.900 | 489 | 256 | 9 | 29 | 508 | 14 | 478 | 1.14e-127 | 382 |
Msa0407990 | AT1G02850.3 | 45.098 | 408 | 189 | 6 | 38 | 419 | 26 | 424 | 2.94e-126 | 375 |
Msa0407990 | AT1G61810.5 | 45.343 | 408 | 217 | 4 | 106 | 508 | 1 | 407 | 6.69e-126 | 374 |
Msa0407990 | AT2G44470.1 | 43.897 | 426 | 226 | 8 | 38 | 454 | 29 | 450 | 1.56e-125 | 374 |
Msa0407990 | AT2G44450.2 | 48.725 | 353 | 176 | 2 | 157 | 508 | 1 | 349 | 1.67e-124 | 368 |
Msa0407990 | AT1G61810.4 | 45.771 | 402 | 209 | 4 | 28 | 420 | 19 | 420 | 1.38e-123 | 368 |
Msa0407990 | AT3G60140.2 | 46.036 | 391 | 204 | 6 | 35 | 419 | 23 | 412 | 2.03e-123 | 369 |
Msa0407990 | AT5G26000.2 | 43.197 | 463 | 248 | 9 | 1 | 455 | 1 | 456 | 2.46e-123 | 369 |
Msa0407990 | AT4G27830.2 | 43.659 | 410 | 210 | 7 | 106 | 508 | 1 | 396 | 1.30e-122 | 366 |
Msa0407990 | AT3G62750.4 | 41.703 | 458 | 229 | 9 | 5 | 457 | 23 | 447 | 1.85e-120 | 362 |
Msa0407990 | AT3G18070.4 | 52.866 | 314 | 145 | 2 | 38 | 351 | 30 | 340 | 3.41e-119 | 355 |
Msa0407990 | AT4G27820.2 | 44.282 | 411 | 207 | 7 | 106 | 508 | 1 | 397 | 5.92e-117 | 351 |
Msa0407990 | AT4G27820.3 | 44.282 | 411 | 207 | 7 | 106 | 508 | 1 | 397 | 5.92e-117 | 351 |
Msa0407990 | AT1G52400.2 | 43.256 | 430 | 223 | 9 | 38 | 454 | 39 | 460 | 1.66e-115 | 349 |
Msa0407990 | AT3G62740.2 | 43.609 | 399 | 199 | 7 | 29 | 419 | 14 | 394 | 2.29e-114 | 345 |
Msa0407990 | AT1G61820.3 | 46.281 | 363 | 190 | 3 | 150 | 508 | 4 | 365 | 1.97e-112 | 338 |
Msa0407990 | AT3G62750.7 | 43.935 | 371 | 183 | 5 | 12 | 377 | 4 | 354 | 1.24e-110 | 333 |
Msa0407990 | AT3G62750.8 | 43.935 | 371 | 183 | 5 | 12 | 377 | 4 | 354 | 1.24e-110 | 333 |
Msa0407990 | AT2G44470.2 | 47.576 | 330 | 166 | 5 | 38 | 363 | 29 | 355 | 2.59e-110 | 333 |
Msa0407990 | AT3G62750.3 | 43.883 | 376 | 186 | 5 | 5 | 375 | 23 | 378 | 4.65e-110 | 334 |
Msa0407990 | AT3G62750.6 | 41.809 | 409 | 211 | 8 | 106 | 508 | 1 | 388 | 2.86e-109 | 331 |
Msa0407990 | AT3G62750.5 | 41.809 | 409 | 211 | 8 | 106 | 508 | 1 | 388 | 2.86e-109 | 331 |
Msa0407990 | AT1G45191.5 | 49.371 | 318 | 156 | 2 | 38 | 355 | 29 | 341 | 3.74e-109 | 331 |
Msa0407990 | AT1G45191.3 | 49.371 | 318 | 156 | 2 | 38 | 355 | 29 | 341 | 4.16e-109 | 331 |
Msa0407990 | AT5G48375.1 | 40.868 | 438 | 193 | 8 | 38 | 473 | 38 | 411 | 3.92e-106 | 324 |
Msa0407990 | AT1G60270.1 | 45.562 | 338 | 177 | 2 | 38 | 372 | 24 | 357 | 2.76e-105 | 320 |
Msa0407990 | AT2G44480.5 | 47.841 | 301 | 156 | 1 | 209 | 508 | 2 | 302 | 4.17e-105 | 317 |
Msa0407990 | AT3G18070.2 | 47.059 | 323 | 166 | 3 | 190 | 510 | 102 | 421 | 2.18e-101 | 311 |
Msa0407990 | AT3G18070.2 | 45.570 | 79 | 42 | 1 | 36 | 114 | 28 | 105 | 4.64e-14 | 74.7 |
Msa0407990 | AT2G44460.2 | 44.847 | 359 | 192 | 6 | 155 | 508 | 1 | 358 | 6.23e-95 | 295 |
Msa0407990 | AT3G18070.7 | 45.833 | 312 | 164 | 3 | 201 | 510 | 1 | 309 | 2.59e-94 | 289 |
Msa0407990 | AT1G61810.2 | 49.291 | 282 | 138 | 2 | 28 | 304 | 19 | 300 | 3.48e-93 | 286 |
Msa0407990 | AT1G51490.1 | 43.251 | 363 | 182 | 10 | 46 | 401 | 28 | 373 | 6.32e-93 | 289 |
Msa0407990 | AT1G60270.2 | 45.185 | 270 | 145 | 1 | 106 | 372 | 1 | 270 | 1.17e-82 | 258 |
Msa0407990 | AT3G18070.5 | 48.069 | 233 | 119 | 1 | 190 | 420 | 102 | 334 | 1.84e-72 | 234 |
Msa0407990 | AT3G18070.5 | 45.570 | 79 | 42 | 1 | 36 | 114 | 28 | 105 | 2.63e-14 | 74.7 |
Msa0407990 | AT3G18070.6 | 46.396 | 222 | 117 | 1 | 201 | 420 | 1 | 222 | 2.93e-65 | 211 |
Msa0407990 | AT5G16580.1 | 39.236 | 288 | 156 | 5 | 182 | 465 | 27 | 299 | 1.55e-60 | 201 |
Msa0407990 | AT3G06510.2 | 27.891 | 441 | 247 | 16 | 95 | 511 | 153 | 546 | 7.15e-24 | 105 |
Msa0407990 | AT3G06510.1 | 27.123 | 424 | 238 | 14 | 95 | 511 | 153 | 512 | 5.20e-23 | 103 |
Find 118 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTCTTCCTTTGTGAATTT+TGG | 0.030488 | 3_2:-47383514 | None:intergenic |
TGATCATATTACCTGATATT+TGG | 0.172492 | 3_2:-47382639 | None:intergenic |
ATAAAGATTATGAAAGAAAT+TGG | 0.173109 | 3_2:+47380931 | Msa0407990:CDS |
ACTAAGGTGACATTGGAATT+TGG | 0.218496 | 3_2:-47386694 | None:intergenic |
ATATTTGGCCTTATACAATT+TGG | 0.224460 | 3_2:-47382624 | None:intergenic |
CCTGTTTCCTACACCATTAA+TGG | 0.229192 | 3_2:+47382476 | Msa0407990:CDS |
CACCTTAGTATTGAGATAAT+TGG | 0.252591 | 3_2:+47386708 | Msa0407990:three_prime_UTR |
CCAGTGTACATTACTGAAAA+TGG | 0.258317 | 3_2:+47384595 | Msa0407990:CDS |
AGAGAAAATCAGGAGGAAAA+AGG | 0.282118 | 3_2:-47378231 | None:intergenic |
AGCTCTTGAAGATAAATATA+AGG | 0.284195 | 3_2:+47382221 | Msa0407990:CDS |
ACTTAAGCTTACACTACTTT+AGG | 0.287213 | 3_2:-47382255 | None:intergenic |
ATGGGAGAGGACCAAGTATA+TGG | 0.302102 | 3_2:+47380521 | Msa0407990:CDS |
GCCTCCATGGTATCCATTAA+TGG | 0.303144 | 3_2:-47382489 | None:intergenic |
TGAAGTAGGTCATGTTGATA+TGG | 0.309455 | 3_2:-47383615 | None:intergenic |
TTCATAGTAGTGAGTAATTA+AGG | 0.320997 | 3_2:-47383080 | None:intergenic |
CCTTTGTAACATTGTTTCAT+TGG | 0.325125 | 3_2:+47382187 | Msa0407990:CDS |
AAACAACATGGGAAAATCTT+AGG | 0.325301 | 3_2:-47386662 | None:intergenic |
TGATCCTAATACCATCTTTA+CGG | 0.327105 | 3_2:-47385838 | None:intergenic |
ACTCAAATTTGATGTTCATT+TGG | 0.334007 | 3_2:+47386635 | Msa0407990:exon |
GAAGGAGCATCAGATATAGA+TGG | 0.336340 | 3_2:+47380502 | Msa0407990:CDS |
GCTTCAAGACATTTGGAGAT+AGG | 0.339805 | 3_2:+47382426 | Msa0407990:CDS |
TCATATTGACTTAACTCATT+TGG | 0.352450 | 3_2:-47386733 | None:intergenic |
GTGCCATAGGCTCATCAAAA+AGG | 0.358255 | 3_2:+47383043 | Msa0407990:intron |
GGATAGTGACCATATGTAAT+TGG | 0.362632 | 3_2:-47383457 | None:intergenic |
TAGCCCGTAAAGATGGTATT+AGG | 0.367113 | 3_2:+47385834 | Msa0407990:CDS |
CACATGTTGTGATGCAGTTC+CGG | 0.372703 | 3_2:-47378173 | None:intergenic |
CCAATTCCAAAGAGAAAATC+AGG | 0.378563 | 3_2:-47378241 | None:intergenic |
GACCATAGCAGTGGTAATAT+TGG | 0.378836 | 3_2:+47380733 | Msa0407990:CDS |
TGCTGCAGCCAAATTGTATA+AGG | 0.379528 | 3_2:+47382616 | Msa0407990:CDS |
CCATTAATGGTGTAGGAAAC+AGG | 0.380986 | 3_2:-47382476 | None:intergenic |
TTGATTGAGCAGAAAAGATT+GGG | 0.388568 | 3_2:+47380710 | Msa0407990:intron |
CTTTGTAACATTGTTTCATT+GGG | 0.391227 | 3_2:+47382188 | Msa0407990:CDS |
TTTGTGATCGGCAACACTAT+TGG | 0.400174 | 3_2:-47383110 | None:intergenic |
CTTGATTGAGCAGAAAAGAT+TGG | 0.402024 | 3_2:+47380709 | Msa0407990:intron |
ACATATTTAGAGCATCTTGC+AGG | 0.404850 | 3_2:-47382521 | None:intergenic |
AATTGGTTCTTCTGCTTACC+AGG | 0.405575 | 3_2:+47378258 | Msa0407990:CDS |
TGGAGATAGGGTTAAGCATT+GGG | 0.413839 | 3_2:+47382439 | Msa0407990:CDS |
GCAGGCTACACAATACGATT+TGG | 0.418910 | 3_2:+47386525 | Msa0407990:CDS |
GGAAGGACCTGTAGCTTTCA+TGG | 0.422205 | 3_2:-47378107 | None:intergenic |
TAAAGATTATGAAAGAAATT+GGG | 0.423732 | 3_2:+47380932 | Msa0407990:CDS |
GATCCTAATACCATCTTTAC+GGG | 0.424683 | 3_2:-47385837 | None:intergenic |
TCTTTACGGGCTACGTTGAC+TGG | 0.425906 | 3_2:-47385824 | None:intergenic |
GTTCATACTTTATCGCTTGA+AGG | 0.425908 | 3_2:-47385889 | None:intergenic |
ATTGTATAAGGCCAAATATC+AGG | 0.426496 | 3_2:+47382628 | Msa0407990:CDS |
CTTCAAGACATTTGGAGATA+GGG | 0.430530 | 3_2:+47382427 | Msa0407990:CDS |
GCTCTTGAAGATAAATATAA+GGG | 0.434296 | 3_2:+47382222 | Msa0407990:CDS |
TTTGCTCATCCAATTACATA+TGG | 0.434508 | 3_2:+47383448 | Msa0407990:CDS |
ATTCACACCAAGAAAATCAT+AGG | 0.436183 | 3_2:-47383554 | None:intergenic |
TATGTTGGAAATTGCTCTAC+TGG | 0.447346 | 3_2:+47382539 | Msa0407990:CDS |
ATGAAGAATGGTGTAGCTAT+TGG | 0.450804 | 3_2:+47383785 | Msa0407990:CDS |
AAGGATGATGTCATTGTTTG+TGG | 0.454750 | 3_2:-47383478 | None:intergenic |
ACAAACAATGACATCATCCT+TGG | 0.456610 | 3_2:+47383480 | Msa0407990:CDS |
TCGGCAACACTATTGGAATA+TGG | 0.458003 | 3_2:-47383103 | None:intergenic |
TTTCAGGTGTTGGTCAATCA+AGG | 0.463308 | 3_2:+47385789 | Msa0407990:intron |
TTGGAGATAGGGTTAAGCAT+TGG | 0.464172 | 3_2:+47382438 | Msa0407990:CDS |
ACGATTTGGAATCATTTATG+TGG | 0.466735 | 3_2:+47386539 | Msa0407990:CDS |
GTGAAGGTGTCCCATATACT+TGG | 0.479301 | 3_2:-47380532 | None:intergenic |
ACTATGCTGCTTCATTCAAC+AGG | 0.482216 | 3_2:+47378206 | Msa0407990:CDS |
TTGTGCAGACGGATTTGAAC+TGG | 0.485462 | 3_2:+47384506 | Msa0407990:intron |
GCAAGATGCTCTAAATATGT+TGG | 0.487404 | 3_2:+47382524 | Msa0407990:CDS |
GGAATTTGAGATGGCTATCA+TGG | 0.493604 | 3_2:-47385865 | None:intergenic |
TTGATCACAGCAATGAAGAA+TGG | 0.494021 | 3_2:+47383773 | Msa0407990:intron |
ATTAATGAGGTCCTAGCAAA+TGG | 0.496953 | 3_2:+47382021 | Msa0407990:CDS |
AAGTGATGAGCAACAATGTA+GGG | 0.499808 | 3_2:-47382578 | None:intergenic |
CAAGGGAGCAGTCAATCCTA+TGG | 0.499863 | 3_2:+47381975 | Msa0407990:CDS |
GTCAACGTAGCCCGTAAAGA+TGG | 0.512028 | 3_2:+47385827 | Msa0407990:CDS |
GACAGCTATGAATGGGATGC+AGG | 0.518505 | 3_2:+47386507 | Msa0407990:CDS |
CAATGAAACAATGTTACAAA+GGG | 0.519446 | 3_2:-47382186 | None:intergenic |
ATGGTATCCATTAATGGTGT+AGG | 0.519527 | 3_2:-47382483 | None:intergenic |
GAAGAATTTAAAATTATCAA+AGG | 0.521384 | 3_2:+47383529 | Msa0407990:CDS |
TATTTATCTTCAAGAGCTTG+TGG | 0.521940 | 3_2:-47382216 | None:intergenic |
CACCAATTATCTCAATACTA+AGG | 0.526913 | 3_2:-47386710 | None:intergenic |
TGCTTGCATATCAGTGAAGT+AGG | 0.529375 | 3_2:-47383629 | None:intergenic |
TGGTGTAGCTATTGGCTCCT+CGG | 0.529880 | 3_2:+47383793 | Msa0407990:CDS |
TCTACTTGCAGCTTTGTGAT+CGG | 0.532372 | 3_2:-47383122 | None:intergenic |
GATTATGAAAGAAATTGGGT+TGG | 0.537525 | 3_2:+47380936 | Msa0407990:CDS |
TGGGAGAGGACCAAGTATAT+GGG | 0.538174 | 3_2:+47380522 | Msa0407990:CDS |
ATTTGAGTTATCCCTTGAGA+AGG | 0.539367 | 3_2:-47386620 | None:intergenic |
ACTGCGGCCATGAAAGCTAC+AGG | 0.540497 | 3_2:+47378100 | Msa0407990:exon |
GTCATGTTGATATGGGTTGG+TGG | 0.541020 | 3_2:-47383607 | None:intergenic |
CAGGTGGAGAAGTGCCTCCA+TGG | 0.544070 | 3_2:-47382502 | None:intergenic |
AAGGAGCATCAGATATAGAT+GGG | 0.546298 | 3_2:+47380503 | Msa0407990:CDS |
AAAGTGATGAGCAACAATGT+AGG | 0.552733 | 3_2:-47382579 | None:intergenic |
GAGGGCGTTTACCATTTGCT+AGG | 0.554661 | 3_2:-47382032 | None:intergenic |
GAAGTAGGTCATGTTGATAT+GGG | 0.560351 | 3_2:-47383614 | None:intergenic |
TCTCAATACTAAGGTGACAT+TGG | 0.560482 | 3_2:-47386701 | None:intergenic |
ACAAGATGATGAATTCCCTT+CGG | 0.561063 | 3_2:-47384541 | None:intergenic |
CTCCAATATTACCACTGCTA+TGG | 0.563780 | 3_2:-47380735 | None:intergenic |
CTACAATAATGTCATTAATG+AGG | 0.565892 | 3_2:+47382008 | Msa0407990:CDS |
GAATATTCTTGACCATGAGA+TGG | 0.567125 | 3_2:-47380974 | None:intergenic |
CAAACAATGACATCATCCTT+GGG | 0.571378 | 3_2:+47383481 | Msa0407990:CDS |
CCAATGAAACAATGTTACAA+AGG | 0.572524 | 3_2:-47382187 | None:intergenic |
TTGTAGAATTTAACTCCCAT+AGG | 0.573321 | 3_2:-47381991 | None:intergenic |
TGCATCCCATTCATAGCTGT+CGG | 0.577051 | 3_2:-47386505 | None:intergenic |
CTTGAAGGAGGAATTTGAGA+TGG | 0.583225 | 3_2:-47385874 | None:intergenic |
TATTTAGAGCATCTTGCAGG+TGG | 0.584647 | 3_2:-47382518 | None:intergenic |
GATATCATATACAGAGGGCA+AGG | 0.588586 | 3_2:+47381957 | Msa0407990:intron |
CATACAGATTCTCCATCTCA+TGG | 0.592212 | 3_2:+47380962 | Msa0407990:CDS |
TACACCATTAATGGATACCA+TGG | 0.597109 | 3_2:+47382485 | Msa0407990:CDS |
CATACTTTATCGCTTGAAGG+AGG | 0.597183 | 3_2:-47385886 | None:intergenic |
AAGGGAGCAGTCAATCCTAT+GGG | 0.598556 | 3_2:+47381976 | Msa0407990:CDS |
ACCTGGATGTTGTTTAGTGA+AGG | 0.598890 | 3_2:-47380548 | None:intergenic |
GCATCAGATATAGATGGGAG+AGG | 0.600821 | 3_2:+47380508 | Msa0407990:CDS |
CAGAGATGGTGCAAATGTGA+AGG | 0.602929 | 3_2:+47386461 | Msa0407990:intron |
ATGTGAAGGGATACTATGCT+TGG | 0.604808 | 3_2:+47386475 | Msa0407990:CDS |
ACCTTCACTAAACAACATCC+AGG | 0.605197 | 3_2:+47380547 | Msa0407990:CDS |
TAGGTCATGTTGATATGGGT+TGG | 0.611086 | 3_2:-47383610 | None:intergenic |
CTGGCTATACGTCTATCCGA+AGG | 0.617276 | 3_2:+47384525 | Msa0407990:CDS |
AATGAAGCAGCATAGTGACT+TGG | 0.634072 | 3_2:-47378199 | None:intergenic |
ATATCATATACAGAGGGCAA+GGG | 0.643133 | 3_2:+47381958 | Msa0407990:intron |
TGGCTATACGTCTATCCGAA+GGG | 0.653262 | 3_2:+47384526 | Msa0407990:CDS |
AATGCTTTGTGCATAATATG+TGG | 0.655668 | 3_2:-47383584 | None:intergenic |
TGATTGAGCAGAAAAGATTG+GGG | 0.664235 | 3_2:+47380711 | Msa0407990:intron |
CAGACTCCCAAAATTCACAA+AGG | 0.677592 | 3_2:+47383507 | Msa0407990:CDS |
AAGATTGGGGACCATAGCAG+TGG | 0.682015 | 3_2:+47380724 | Msa0407990:CDS |
AGAGATGGTGCAAATGTGAA+GGG | 0.682450 | 3_2:+47386462 | Msa0407990:intron |
ATTCCAAAGAGAAAATCAGG+AGG | 0.702676 | 3_2:-47378238 | None:intergenic |
ACCATTAATGGATACCATGG+AGG | 0.703475 | 3_2:+47382488 | Msa0407990:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATATAT+AGG | + | chr3_2:47384076-47384095 | Msa0407990:intron | 0.0% |
!! | TATATATATATATATATATA+GGG | + | chr3_2:47384077-47384096 | Msa0407990:intron | 0.0% |
!! | ATATATATATATATATATAT+GGG | - | chr3_2:47384076-47384095 | None:intergenic | 0.0% |
!! | TATATATATATATATATATA+TGG | - | chr3_2:47384077-47384096 | None:intergenic | 0.0% |
!!! | TAATAAGATAATAATTTTTC+AGG | + | chr3_2:47379184-47379203 | Msa0407990:intron | 10.0% |
!!! | TATTAATTTATGATTTTCTT+GGG | - | chr3_2:47379232-47379251 | None:intergenic | 10.0% |
!!! | TTATTAATTTATGATTTTCT+TGG | - | chr3_2:47379233-47379252 | None:intergenic | 10.0% |
!! | CATTTACATATATAAATATA+TGG | + | chr3_2:47379843-47379862 | Msa0407990:intron | 10.0% |
!!! | AAATTTATTTTTTGTTAATG+TGG | - | chr3_2:47380674-47380693 | None:intergenic | 10.0% |
!! | ATGTGAAAATTAAATATTTA+TGG | - | chr3_2:47380846-47380865 | None:intergenic | 10.0% |
!!! | AATATTTGAATATTTCTTTT+GGG | - | chr3_2:47381255-47381274 | None:intergenic | 10.0% |
!!! | TAATATTTGAATATTTCTTT+TGG | - | chr3_2:47381256-47381275 | None:intergenic | 10.0% |
!!! | TATTTTTTCAGTAAAAAAAT+CGG | - | chr3_2:47381661-47381680 | None:intergenic | 10.0% |
!!! | AAAATATTACAAGATTTTTA+CGG | + | chr3_2:47381675-47381694 | Msa0407990:intron | 10.0% |
!!! | ATTTATTTTATTTTTGCAAT+AGG | - | chr3_2:47382286-47382305 | None:intergenic | 10.0% |
!! | CTTAATTTAATGAATAAAAT+AGG | + | chr3_2:47382375-47382394 | Msa0407990:intron | 10.0% |
!!! | AAAATAAACATTGATTTTTT+TGG | + | chr3_2:47383388-47383407 | Msa0407990:intron | 10.0% |
!! | ATATATATATAATTGTAAAG+AGG | + | chr3_2:47384424-47384443 | Msa0407990:intron | 10.0% |
!!! | TTAAGATTTTTTTTTTTTTG+AGG | - | chr3_2:47386047-47386066 | None:intergenic | 10.0% |
!! | TTTATATAAAAAGTTTAAAG+AGG | - | chr3_2:47386377-47386396 | None:intergenic | 10.0% |
!!! | CTTTAAAAAAGGATTAAAAT+AGG | + | chr3_2:47378448-47378467 | Msa0407990:intron | 15.0% |
!! | GTTATAATTATCCATATAAT+CGG | + | chr3_2:47378558-47378577 | Msa0407990:intron | 15.0% |
!! | TTATAATTATCCATATAATC+GGG | + | chr3_2:47378559-47378578 | Msa0407990:intron | 15.0% |
!!! | TCTAAAATAATAAATTTGTC+CGG | + | chr3_2:47379118-47379137 | Msa0407990:intron | 15.0% |
!!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr3_2:47379156-47379175 | None:intergenic | 15.0% |
!! | ATGTAAAAAATTGAAAAACT+CGG | + | chr3_2:47379156-47379175 | Msa0407990:intron | 15.0% |
!! | TCTAAATTAATAAATTTCTC+TGG | + | chr3_2:47379521-47379540 | Msa0407990:intron | 15.0% |
!!! | TTCAATTATTTTGTAGAATT+AGG | - | chr3_2:47379766-47379785 | None:intergenic | 15.0% |
!!! | TTTTCAAATTCCATATTTTA+GGG | - | chr3_2:47380338-47380357 | None:intergenic | 15.0% |
!!! | TTTTTCAAATTCCATATTTT+AGG | - | chr3_2:47380339-47380358 | None:intergenic | 15.0% |
!! | ATGGAATTTGAAAAAAATAA+TGG | + | chr3_2:47380344-47380363 | Msa0407990:intron | 15.0% |
!! | ATAAAGATTATGAAAGAAAT+TGG | + | chr3_2:47380931-47380950 | Msa0407990:CDS | 15.0% |
!! | TAAAGATTATGAAAGAAATT+GGG | + | chr3_2:47380932-47380951 | Msa0407990:CDS | 15.0% |
!!! | TCAAATATTACATGATTTTT+TGG | + | chr3_2:47381266-47381285 | Msa0407990:intron | 15.0% |
!!! | CAAATATTACATGATTTTTT+GGG | + | chr3_2:47381267-47381286 | Msa0407990:intron | 15.0% |
!!! | ATTTTTTCAGTAAAAAAATC+GGG | - | chr3_2:47381660-47381679 | None:intergenic | 15.0% |
!!! | AATTTTTTTTATATATACGG+TGG | + | chr3_2:47382152-47382171 | Msa0407990:intron | 15.0% |
!! | ATTTAATGAATAAAATAGGA+AGG | + | chr3_2:47382379-47382398 | Msa0407990:intron | 15.0% |
!!! | CACTATAAATACATTTTTTA+AGG | - | chr3_2:47382980-47382999 | None:intergenic | 15.0% |
!! | AAGAATAAGAAGATTATTAT+TGG | + | chr3_2:47383218-47383237 | Msa0407990:intron | 15.0% |
!!! | CAATGTTTATTTTCATAAAA+CGG | - | chr3_2:47383381-47383400 | None:intergenic | 15.0% |
!!! | GAACTTAATATTTATTTTTC+AGG | + | chr3_2:47383425-47383444 | Msa0407990:intron | 15.0% |
!!! | GAAGAATTTAAAATTATCAA+AGG | + | chr3_2:47383529-47383548 | Msa0407990:CDS | 15.0% |
!! | TAAGCCATTATATAAAAAAT+CGG | + | chr3_2:47383693-47383712 | Msa0407990:intron | 15.0% |
!! | CTATACTAAATAATGAAAAA+AGG | - | chr3_2:47384643-47384662 | None:intergenic | 15.0% |
!!! | TATATTATTTGTTGTGAATT+AGG | + | chr3_2:47384868-47384887 | Msa0407990:intron | 15.0% |
!! | ATATTAATCAATTAACTCTT+AGG | + | chr3_2:47385590-47385609 | Msa0407990:intron | 15.0% |
!! | AATATAGTGAAATAGAATTA+GGG | - | chr3_2:47385980-47385999 | None:intergenic | 15.0% |
!! | TAATATAGTGAAATAGAATT+AGG | - | chr3_2:47385981-47386000 | None:intergenic | 15.0% |
!!! | AAATCGAGTTTATAATATTT+TGG | - | chr3_2:47386076-47386095 | None:intergenic | 15.0% |
!! | ACAAGCAAAATAAATTTAGT+GGG | - | chr3_2:47378330-47378349 | None:intergenic | 20.0% |
!! | AACAAGCAAAATAAATTTAG+TGG | - | chr3_2:47378331-47378350 | None:intergenic | 20.0% |
!!! | ATCCTTTTTTAAAGAAATGA+TGG | - | chr3_2:47378442-47378461 | None:intergenic | 20.0% |
!! | AATACTTACAAAATTAGCAT+AGG | - | chr3_2:47378538-47378557 | None:intergenic | 20.0% |
!! | CTTAAGTAGAAAAAAAAATG+AGG | + | chr3_2:47380291-47380310 | Msa0407990:intron | 20.0% |
!!! | TTTCAAATTCCATATTTTAG+GGG | - | chr3_2:47380337-47380356 | None:intergenic | 20.0% |
!! | GAATTTGAAAAAAATAATGG+AGG | + | chr3_2:47380347-47380366 | Msa0407990:intron | 20.0% |
!! | GAAAAATTTGTACAAACAAA+AGG | - | chr3_2:47380477-47380496 | None:intergenic | 20.0% |
!!! | TTTGTTTGTACAAATTTTTC+AGG | + | chr3_2:47380477-47380496 | Msa0407990:intron | 20.0% |
!! | AAAAAATAAATAGAGTAACC+TGG | - | chr3_2:47380568-47380587 | None:intergenic | 20.0% |
!! | TAATCAACTTAAATGTTACT+TGG | - | chr3_2:47381021-47381040 | None:intergenic | 20.0% |
!!! | TTTCTTTTTTGTGTTAACAT+CGG | - | chr3_2:47381068-47381087 | None:intergenic | 20.0% |
!! | ATGTTAACACAAAAAAGAAA+TGG | + | chr3_2:47381068-47381087 | Msa0407990:intron | 20.0% |
!! | TGTTAACACAAAAAAGAAAT+GGG | + | chr3_2:47381069-47381088 | Msa0407990:intron | 20.0% |
!! | ACAAAAAAATTAATGATGGT+GGG | - | chr3_2:47381445-47381464 | None:intergenic | 20.0% |
!! | AGACACAAAAAAATTAATGA+TGG | - | chr3_2:47381441-47381460 | None:intergenic | 20.0% |
!! | AGACACAAAAAAATTAATGA+TGG | + | chr3_2:47381441-47381460 | Msa0407990:intron | 20.0% |
!! | ACAAAAAAATTAATGATGGT+GGG | + | chr3_2:47381445-47381464 | Msa0407990:intron | 20.0% |
!! | TATAAATGTACACATTTCAA+GGG | - | chr3_2:47381568-47381587 | None:intergenic | 20.0% |
!! | ATATAAATGTACACATTTCA+AGG | - | chr3_2:47381569-47381588 | None:intergenic | 20.0% |
!!! | TTGACATTTCCATTTTATTT+AGG | + | chr3_2:47381616-47381635 | Msa0407990:intron | 20.0% |
!!! | TTTCCATTTTATTTAGGAAA+TGG | + | chr3_2:47381622-47381641 | Msa0407990:intron | 20.0% |
!! | ATGCATAATAATATAAGATC+CGG | + | chr3_2:47381796-47381815 | Msa0407990:intron | 20.0% |
!! | TTCAAATAGTGATTATATGA+GGG | - | chr3_2:47382053-47382072 | None:intergenic | 20.0% |
!! | ATTCAAATAGTGATTATATG+AGG | - | chr3_2:47382054-47382073 | None:intergenic | 20.0% |
!! | CAATTGATGAAATTTATGTT+TGG | + | chr3_2:47383021-47383040 | Msa0407990:intron | 20.0% |
!!! | TATATAATGGCTTATTTTAC+TGG | - | chr3_2:47383687-47383706 | None:intergenic | 20.0% |
!!! | ACAACCGATTTTTTATATAA+TGG | - | chr3_2:47383700-47383719 | None:intergenic | 20.0% |
!! | AAAAATACCATATAATGCTT+TGG | + | chr3_2:47384448-47384467 | Msa0407990:intron | 20.0% |
!! | AAAATACCATATAATGCTTT+GGG | + | chr3_2:47384449-47384468 | Msa0407990:intron | 20.0% |
!! | AACTAACTTAGATCTAATAT+AGG | + | chr3_2:47384960-47384979 | Msa0407990:intron | 20.0% |
!!! | TTTTTACAAAGAGATACAAA+AGG | + | chr3_2:47385124-47385143 | Msa0407990:intron | 20.0% |
!!! | TTTTACAAAGAGATACAAAA+GGG | + | chr3_2:47385125-47385144 | Msa0407990:intron | 20.0% |
!! | AAAACATTTGTAAACACATT+GGG | - | chr3_2:47385252-47385271 | None:intergenic | 20.0% |
!!! | GACTCAAATTTTTTAAGTTT+GGG | - | chr3_2:47385548-47385567 | None:intergenic | 20.0% |
!!! | TGACTCAAATTTTTTAAGTT+TGG | - | chr3_2:47385549-47385568 | None:intergenic | 20.0% |
!!! | TTATAAACTCGATTTTTTGT+TGG | + | chr3_2:47386081-47386100 | Msa0407990:intron | 20.0% |
!!! | AATTGATTATGGTAACTTTT+TGG | + | chr3_2:47386426-47386445 | Msa0407990:intron | 20.0% |
! | TATAATCATGATTGTGGTTA+GGG | - | chr3_2:47378628-47378647 | None:intergenic | 25.0% |
! | ATATAATCATGATTGTGGTT+AGG | - | chr3_2:47378629-47378648 | None:intergenic | 25.0% |
! | ATGTCTAAACAATATCAACA+TGG | - | chr3_2:47378713-47378732 | None:intergenic | 25.0% |
!!! | AACTAATTTGCCTTTTTGTT+TGG | + | chr3_2:47379428-47379447 | Msa0407990:intron | 25.0% |
! | TAATCTAAACCCCTAAAATA+TGG | + | chr3_2:47380325-47380344 | Msa0407990:intron | 25.0% |
!! | AAAATAATGGAGGATAATGT+TGG | + | chr3_2:47380357-47380376 | Msa0407990:intron | 25.0% |
!! | TGATTTTTATCATCGATACA+AGG | + | chr3_2:47380759-47380778 | Msa0407990:CDS | 25.0% |
!! | GAAGTATTCTTATCTTACTT+GGG | - | chr3_2:47380999-47381018 | None:intergenic | 25.0% |
! | CAAATGGAACAAATTACAAA+TGG | - | chr3_2:47381529-47381548 | None:intergenic | 25.0% |
! | GATAGACACAAAAAAATAAG+TGG | + | chr3_2:47381143-47381162 | Msa0407990:intron | 25.0% |
! | CACAAAAAAATTAATGATGG+TGG | - | chr3_2:47381444-47381463 | None:intergenic | 25.0% |
! | CAAATGGAACAAAATACAAA+TGG | + | chr3_2:47381217-47381236 | Msa0407990:intron | 25.0% |
! | ACATTTATACACCAAAACTT+TGG | - | chr3_2:47381336-47381355 | None:intergenic | 25.0% |
! | AATGTCTTCAATTCTTGAAA+TGG | + | chr3_2:47381362-47381381 | Msa0407990:intron | 25.0% |
! | ATGTCTTCAATTCTTGAAAT+GGG | + | chr3_2:47381363-47381382 | Msa0407990:intron | 25.0% |
! | CAAATGGAACAAATTACAAA+TGG | - | chr3_2:47381529-47381548 | None:intergenic | 25.0% |
! | CACAAAAAAATTAATGATGG+TGG | + | chr3_2:47381444-47381463 | Msa0407990:intron | 25.0% |
! | CAAATGGAACAAATTACAAA+TGG | + | chr3_2:47381529-47381548 | Msa0407990:intron | 25.0% |
! | ATAAATGTACACATTTCAAG+GGG | - | chr3_2:47381567-47381586 | None:intergenic | 25.0% |
! | TCTCCATTTCCTAAATAAAA+TGG | - | chr3_2:47381628-47381647 | None:intergenic | 25.0% |
!!! | ATTTTATTTAGGAAATGGAG+AGG | + | chr3_2:47381627-47381646 | Msa0407990:intron | 25.0% |
! | TGCATAATAATATAAGATCC+GGG | + | chr3_2:47381797-47381816 | Msa0407990:intron | 25.0% |
! | CTACAATAATGTCATTAATG+AGG | + | chr3_2:47382008-47382027 | Msa0407990:CDS | 25.0% |
! | CAATGAAACAATGTTACAAA+GGG | - | chr3_2:47382189-47382208 | None:intergenic | 25.0% |
! | CTTTGTAACATTGTTTCATT+GGG | + | chr3_2:47382188-47382207 | Msa0407990:CDS | 25.0% |
! | AGCTCTTGAAGATAAATATA+AGG | + | chr3_2:47382221-47382240 | Msa0407990:CDS | 25.0% |
! | GCTCTTGAAGATAAATATAA+GGG | + | chr3_2:47382222-47382241 | Msa0407990:CDS | 25.0% |
!!! | ATATTTGGCCTTATACAATT+TGG | - | chr3_2:47382627-47382646 | None:intergenic | 25.0% |
! | TGATCATATTACCTGATATT+TGG | - | chr3_2:47382642-47382661 | None:intergenic | 25.0% |
!!! | AACACAACCACTTTTTAATT+CGG | - | chr3_2:47382874-47382893 | None:intergenic | 25.0% |
! | TTCATAGTAGTGAGTAATTA+AGG | - | chr3_2:47383083-47383102 | None:intergenic | 25.0% |
!! | ATTCTTCCTTTGTGAATTTT+GGG | - | chr3_2:47383516-47383535 | None:intergenic | 25.0% |
!! | AATTCTTCCTTTGTGAATTT+TGG | - | chr3_2:47383517-47383536 | None:intergenic | 25.0% |
! | AAAAATAAAAGATCATACCG+AGG | - | chr3_2:47383813-47383832 | None:intergenic | 25.0% |
!!! | GGTATGATCTTTTATTTTTG+TGG | + | chr3_2:47383814-47383833 | Msa0407990:intron | 25.0% |
! | GCTATATGACATGAAAAATT+TGG | - | chr3_2:47383901-47383920 | None:intergenic | 25.0% |
! | ACAATAGCTATATTATGATG+CGG | + | chr3_2:47383979-47383998 | Msa0407990:intron | 25.0% |
! | TTATTGCTTCTTCCTAATAT+GGG | - | chr3_2:47384671-47384690 | None:intergenic | 25.0% |
! | ACTCAATTAATTGATTGCAT+AGG | - | chr3_2:47384759-47384778 | None:intergenic | 25.0% |
!!! | CATAGTTTTGATGCTTAATT+TGG | - | chr3_2:47384804-47384823 | None:intergenic | 25.0% |
! | CAAATTAAGCATCAAAACTA+TGG | + | chr3_2:47384802-47384821 | Msa0407990:intron | 25.0% |
! | TTATGTAAGTATGTCCATTA+GGG | - | chr3_2:47384833-47384852 | None:intergenic | 25.0% |
!! | CTCTATTTATCTTTTACTTG+TGG | - | chr3_2:47385007-47385026 | None:intergenic | 25.0% |
! | GAAAACATTTGTAAACACAT+TGG | - | chr3_2:47385253-47385272 | None:intergenic | 25.0% |
!! | AAAAATCATAGCACGATTTT+GGG | - | chr3_2:47385447-47385466 | None:intergenic | 25.0% |
!! | TAAAAATCATAGCACGATTT+TGG | - | chr3_2:47385448-47385467 | None:intergenic | 25.0% |
! | CAATTAACTCTTAGGAAAAT+AGG | + | chr3_2:47385598-47385617 | Msa0407990:intron | 25.0% |
!!! | GTTAGCTAGATGTATTTTTA+TGG | - | chr3_2:47385696-47385715 | None:intergenic | 25.0% |
!!! | TTGTTTTGTGAATATGTTTC+AGG | + | chr3_2:47385773-47385792 | Msa0407990:intron | 25.0% |
! | GAATTAATCTCACAATTAAC+AGG | - | chr3_2:47386245-47386264 | None:intergenic | 25.0% |
!! | CAATTCTTTATGAGGTATTT+AGG | - | chr3_2:47386411-47386430 | None:intergenic | 25.0% |
! | ACCTCATAAAGAATTGATTA+TGG | + | chr3_2:47386415-47386434 | Msa0407990:intron | 25.0% |
! | ACCATAATCAATTCTTTATG+AGG | - | chr3_2:47386419-47386438 | None:intergenic | 25.0% |
! | ACTCAAATTTGATGTTCATT+TGG | + | chr3_2:47386635-47386654 | Msa0407990:exon | 25.0% |
!!! | TCATATTGACTTAACTCATT+TGG | - | chr3_2:47386736-47386755 | None:intergenic | 25.0% |
ATGCATTGTTGCTAATAATG+TGG | - | chr3_2:47378293-47378312 | None:intergenic | 30.0% | |
ATTTAGTGGGAAGTCAATAA+TGG | - | chr3_2:47378317-47378336 | None:intergenic | 30.0% | |
TTATACATAGCTCGTCATAA+AGG | + | chr3_2:47378350-47378369 | Msa0407990:intron | 30.0% | |
! | CGCCATCATTTCTTTAAAAA+AGG | + | chr3_2:47378437-47378456 | Msa0407990:intron | 30.0% |
CTGTGATATAATCATGATTG+TGG | - | chr3_2:47378634-47378653 | None:intergenic | 30.0% | |
TTTGTATTAGCCACATTTCA+TGG | - | chr3_2:47378679-47378698 | None:intergenic | 30.0% | |
AATTCTTTGATGTTGTTGTC+AGG | + | chr3_2:47378742-47378761 | Msa0407990:intron | 30.0% | |
! | GGAGATCCCTTTATAATTTT+CGG | + | chr3_2:47379205-47379224 | Msa0407990:intron | 30.0% |
TTGGGACCGAAAATTATAAA+GGG | - | chr3_2:47379214-47379233 | None:intergenic | 30.0% | |
ACTGTACATACCAAACAAAA+AGG | - | chr3_2:47379441-47379460 | None:intergenic | 30.0% | |
ATGTACAATGACATTATCTC+TGG | + | chr3_2:47379620-47379639 | Msa0407990:intron | 30.0% | |
!!! | AGAATTTTTCAAGACACAGT+TGG | + | chr3_2:47379897-47379916 | Msa0407990:intron | 30.0% |
TTGATGCCTCAAAAAATATG+AGG | + | chr3_2:47380103-47380122 | Msa0407990:intron | 30.0% | |
ATTTGTCACTATGTGTATCT+TGG | + | chr3_2:47380257-47380276 | Msa0407990:intron | 30.0% | |
!!! | GTACAAATTTTTCAGGTAGA+AGG | + | chr3_2:47380484-47380503 | Msa0407990:intron | 30.0% |
TTATCGAATATTTGAGCTCA+TGG | + | chr3_2:47380647-47380666 | Msa0407990:intron | 30.0% | |
TTGATTGAGCAGAAAAGATT+GGG | + | chr3_2:47380710-47380729 | Msa0407990:intron | 30.0% | |
! | TTTTATCATCGATACAAGGT+AGG | + | chr3_2:47380763-47380782 | Msa0407990:intron | 30.0% |
GATTATGAAAGAAATTGGGT+TGG | + | chr3_2:47380936-47380955 | Msa0407990:CDS | 30.0% | |
!! | GGAAGTATTCTTATCTTACT+TGG | - | chr3_2:47381000-47381019 | None:intergenic | 30.0% |
! | TTGTTCCATTTGTTGCAATT+TGG | + | chr3_2:47381115-47381134 | Msa0407990:intron | 30.0% |
AGACACAAAAAAATAAGTGG+TGG | + | chr3_2:47381146-47381165 | Msa0407990:intron | 30.0% | |
GACACAAAAAAATAAGTGGT+GGG | + | chr3_2:47381147-47381166 | Msa0407990:intron | 30.0% | |
! | TTGTTCCATTTGTTGCAATT+TGG | - | chr3_2:47381115-47381134 | None:intergenic | 30.0% |
CAAATGGAGAGAACTTAAAA+TGG | - | chr3_2:47381305-47381324 | None:intergenic | 30.0% | |
!! | AACTTTGGTAATGGAACAAA+TGG | - | chr3_2:47381321-47381340 | None:intergenic | 30.0% |
! | TTGTTCCATTACCAAAGTTT+TGG | + | chr3_2:47381322-47381341 | Msa0407990:intron | 30.0% |
ATACACCAAAACTTTGGTAA+TGG | - | chr3_2:47381330-47381349 | None:intergenic | 30.0% | |
TGTCTTCAATTCTTGAAATG+GGG | + | chr3_2:47381364-47381383 | Msa0407990:intron | 30.0% | |
! | TTGTTCCATTTGTTGCAATT+TGG | + | chr3_2:47381115-47381134 | Msa0407990:intron | 30.0% |
GATAGACACAAAAAAGTAAG+TGG | - | chr3_2:47381493-47381512 | None:intergenic | 30.0% | |
! | TTGTTCCATTTGTTGCAATT+TGG | - | chr3_2:47381115-47381134 | None:intergenic | 30.0% |
! | ATTCTTTTACCACTATGTGA+TGG | + | chr3_2:47381719-47381738 | Msa0407990:intron | 30.0% |
GCATAATAATATAAGATCCG+GGG | + | chr3_2:47381798-47381817 | Msa0407990:intron | 30.0% | |
!!! | GTCTCTTTTTTTTTTGTGGT+CGG | - | chr3_2:47381832-47381851 | None:intergenic | 30.0% |
GACCACAAAAAAAAAAGAGA+CGG | + | chr3_2:47381831-47381850 | Msa0407990:intron | 30.0% | |
ACCACAAAAAAAAAAGAGAC+GGG | + | chr3_2:47381832-47381851 | Msa0407990:intron | 30.0% | |
TGCAATGATATCATATACAG+AGG | + | chr3_2:47381951-47381970 | Msa0407990:intron | 30.0% | |
GCAATGATATCATATACAGA+GGG | + | chr3_2:47381952-47381971 | Msa0407990:intron | 30.0% | |
TTGTAGAATTTAACTCCCAT+AGG | - | chr3_2:47381994-47382013 | None:intergenic | 30.0% | |
!!! | TTTTTTATATATACGGTGGC+AGG | + | chr3_2:47382156-47382175 | Msa0407990:intron | 30.0% |
CCAATGAAACAATGTTACAA+AGG | - | chr3_2:47382190-47382209 | None:intergenic | 30.0% | |
CCTTTGTAACATTGTTTCAT+TGG | + | chr3_2:47382187-47382206 | Msa0407990:CDS | 30.0% | |
TATTTATCTTCAAGAGCTTG+TGG | - | chr3_2:47382219-47382238 | None:intergenic | 30.0% | |
ACTTAAGCTTACACTACTTT+AGG | - | chr3_2:47382258-47382277 | None:intergenic | 30.0% | |
! | GATTTTTGCTTCAAGACATT+TGG | + | chr3_2:47382419-47382438 | Msa0407990:CDS | 30.0% |
ATTGTATAAGGCCAAATATC+AGG | + | chr3_2:47382628-47382647 | Msa0407990:CDS | 30.0% | |
GATCAAACCGAATTAAAAAG+TGG | + | chr3_2:47382864-47382883 | Msa0407990:intron | 30.0% | |
TTGCTCATTCACTACATTAA+CGG | - | chr3_2:47382932-47382951 | None:intergenic | 30.0% | |
!! | AAATTTATGTTTGGTGCCAT+AGG | + | chr3_2:47383030-47383049 | Msa0407990:intron | 30.0% |
GCTCATCAAAAAGGAAAAAT+TGG | + | chr3_2:47383052-47383071 | Msa0407990:CDS | 30.0% | |
!! | AGAGCACTTGACTTTTTATT+TGG | + | chr3_2:47383142-47383161 | Msa0407990:CDS | 30.0% |
!! | CACTTGACTTTTTATTTGGA+TGG | + | chr3_2:47383146-47383165 | Msa0407990:CDS | 30.0% |
TTTGCTCATCCAATTACATA+TGG | + | chr3_2:47383448-47383467 | Msa0407990:CDS | 30.0% | |
! | AAAGGTTCCTATGATTTTCT+TGG | + | chr3_2:47383547-47383566 | Msa0407990:CDS | 30.0% |
ATTCACACCAAGAAAATCAT+AGG | - | chr3_2:47383557-47383576 | None:intergenic | 30.0% | |
ATCTCGTTCGTAAGTATTTA+TGG | + | chr3_2:47383653-47383672 | Msa0407990:intron | 30.0% | |
!!! | TCTGTATGTGTTGTTTTTCT+TGG | + | chr3_2:47383842-47383861 | Msa0407990:intron | 30.0% |
!!! | TTTCTTGGCTTCTTTGTTTT+TGG | + | chr3_2:47383857-47383876 | Msa0407990:intron | 30.0% |
! | GTGATTTTGTTCGAAACAAA+TGG | - | chr3_2:47383936-47383955 | None:intergenic | 30.0% |
TATAGCTATTGTAGCTTCAT+AGG | - | chr3_2:47383971-47383990 | None:intergenic | 30.0% | |
! | GATGTCTTTTAAACCTCTAT+TGG | + | chr3_2:47384019-47384038 | Msa0407990:intron | 30.0% |
! | TTTTATCAAGTCACACCTTA+AGG | + | chr3_2:47384202-47384221 | Msa0407990:intron | 30.0% |
AAAGTGAAAATCACACCTTA+AGG | - | chr3_2:47384220-47384239 | None:intergenic | 30.0% | |
ACACCTTCATAAAAGTAAGT+TGG | + | chr3_2:47384262-47384281 | Msa0407990:intron | 30.0% | |
!! | ACACCAACTTACTTTTATGA+AGG | - | chr3_2:47384268-47384287 | None:intergenic | 30.0% |
ATAAAAGACACCTTCACAAA+AGG | + | chr3_2:47384317-47384336 | Msa0407990:intron | 30.0% | |
CTTAGTGAAGCAAAACTTTA+TGG | + | chr3_2:47384482-47384501 | Msa0407990:intron | 30.0% | |
CTTATTGCTTCTTCCTAATA+TGG | - | chr3_2:47384672-47384691 | None:intergenic | 30.0% | |
ACACTACAAGAATTTGAACA+TGG | - | chr3_2:47384723-47384742 | None:intergenic | 30.0% | |
GTTATGTAAGTATGTCCATT+AGG | - | chr3_2:47384834-47384853 | None:intergenic | 30.0% | |
CTTCACACGTCTAAATTTAT+TGG | - | chr3_2:47384907-47384926 | None:intergenic | 30.0% | |
CAAGAAATGTTTACCCAATT+CGG | + | chr3_2:47385044-47385063 | Msa0407990:intron | 30.0% | |
! | GTAGAAATTAGGTTTGTTCT+TGG | - | chr3_2:47385179-47385198 | None:intergenic | 30.0% |
TTGAAAACAGAGAGAAACTT+GGG | - | chr3_2:47385346-47385365 | None:intergenic | 30.0% | |
TTTGAAAACAGAGAGAAACT+TGG | - | chr3_2:47385347-47385366 | None:intergenic | 30.0% | |
!! | ACGATTTTTAGACAAAATGC+AGG | - | chr3_2:47385508-47385527 | None:intergenic | 30.0% |
TGATCCTAATACCATCTTTA+CGG | - | chr3_2:47385841-47385860 | None:intergenic | 30.0% | |
TAGGGAAACTTGTAAATCTA+GGG | - | chr3_2:47385962-47385981 | None:intergenic | 30.0% | |
TTAGGGAAACTTGTAAATCT+AGG | - | chr3_2:47385963-47385982 | None:intergenic | 30.0% | |
TTCAAAGAGTCTAATCTACA+AGG | - | chr3_2:47386222-47386241 | None:intergenic | 30.0% | |
TGTGAGATTAATTCTCAAGT+AGG | + | chr3_2:47386251-47386270 | Msa0407990:intron | 30.0% | |
AAGTAGGCAGCAAAATATTA+GGG | + | chr3_2:47386267-47386286 | Msa0407990:intron | 30.0% | |
!!! | TAGGGTTTTTTGATGATTGT+TGG | + | chr3_2:47386285-47386304 | Msa0407990:intron | 30.0% |
! | TTTAGAGTCGTTACTTTCAA+AGG | - | chr3_2:47386315-47386334 | None:intergenic | 30.0% |
! | ACGATTTGGAATCATTTATG+TGG | + | chr3_2:47386539-47386558 | Msa0407990:CDS | 30.0% |
AAACAACATGGGAAAATCTT+AGG | - | chr3_2:47386665-47386684 | None:intergenic | 30.0% | |
GGAAATTCGAAAAACAACAT+GGG | - | chr3_2:47386676-47386695 | None:intergenic | 30.0% | |
TGGAAATTCGAAAAACAACA+TGG | - | chr3_2:47386677-47386696 | None:intergenic | 30.0% | |
! | CACCTTAGTATTGAGATAAT+TGG | + | chr3_2:47386708-47386727 | Msa0407990:three_prime_UTR | 30.0% |
CACCAATTATCTCAATACTA+AGG | - | chr3_2:47386713-47386732 | None:intergenic | 30.0% | |
CAGAGAAAAAAGATAGAGGA+GGG | - | chr3_2:47378131-47378150 | None:intergenic | 35.0% | |
TAGCCAGAGAAAAAAGATAG+AGG | - | chr3_2:47378135-47378154 | None:intergenic | 35.0% | |
GAGAAAATCAGGAGGAAAAA+GGG | - | chr3_2:47378233-47378252 | None:intergenic | 35.0% | |
AGAGAAAATCAGGAGGAAAA+AGG | - | chr3_2:47378234-47378253 | None:intergenic | 35.0% | |
! | TTTCCTCCTGATTTTCTCTT+TGG | + | chr3_2:47378235-47378254 | Msa0407990:CDS | 35.0% |
ATTCCAAAGAGAAAATCAGG+AGG | - | chr3_2:47378241-47378260 | None:intergenic | 35.0% | |
CCAATTCCAAAGAGAAAATC+AGG | - | chr3_2:47378244-47378263 | None:intergenic | 35.0% | |
!!! | CCTGATTTTCTCTTTGGAAT+TGG | + | chr3_2:47378241-47378260 | Msa0407990:CDS | 35.0% |
ATAATGTGGTGGTATTAACC+TGG | - | chr3_2:47378279-47378298 | None:intergenic | 35.0% | |
CATTGTTGCTAATAATGTGG+TGG | - | chr3_2:47378290-47378309 | None:intergenic | 35.0% | |
AAAACGAACATCGAAAACAC+CGG | - | chr3_2:47378387-47378406 | None:intergenic | 35.0% | |
AAGAATCGATCCCGATTATA+TGG | - | chr3_2:47378572-47378591 | None:intergenic | 35.0% | |
TGAAACGTTAAAGAGTAGAG+TGG | - | chr3_2:47378605-47378624 | None:intergenic | 35.0% | |
GTTCTTGATATCACAGACAA+TGG | + | chr3_2:47378653-47378672 | Msa0407990:intron | 35.0% | |
GGCTAATACAAACTCAATTG+TGG | + | chr3_2:47378687-47378706 | Msa0407990:intron | 35.0% | |
CATAGAACACTCAAAATCTC+AGG | - | chr3_2:47378774-47378793 | None:intergenic | 35.0% | |
!!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr3_2:47379146-47379165 | None:intergenic | 35.0% |
CTTGGGACCGAAAATTATAA+AGG | - | chr3_2:47379215-47379234 | None:intergenic | 35.0% | |
ACTACTGTGTTCATATGCAT+TGG | - | chr3_2:47379354-47379373 | None:intergenic | 35.0% | |
CGCTGCAACATAATTCTAAA+AGG | + | chr3_2:47379401-47379420 | Msa0407990:intron | 35.0% | |
TAAATGCACGTGAAACGTTA+GGG | - | chr3_2:47379829-47379848 | None:intergenic | 35.0% | |
!!! | TTTTTGAGGCATCAAGTCAT+TGG | - | chr3_2:47380098-47380117 | None:intergenic | 35.0% |
ATATATGCAGCAACCAATGA+CGG | - | chr3_2:47380164-47380183 | None:intergenic | 35.0% | |
! | ATGGAGGATAATGTTGGTTA+AGG | + | chr3_2:47380363-47380382 | Msa0407990:intron | 35.0% |
! | TGGAGGATAATGTTGGTTAA+GGG | + | chr3_2:47380364-47380383 | Msa0407990:intron | 35.0% |
!!! | AGCATTTTTTCCTTGTATCC+TGG | + | chr3_2:47380417-47380436 | Msa0407990:intron | 35.0% |
!!! | ATTTTTTCCTTGTATCCTGG+TGG | + | chr3_2:47380420-47380439 | Msa0407990:intron | 35.0% |
!! | AAGGAGCATCAGATATAGAT+GGG | + | chr3_2:47380503-47380522 | Msa0407990:CDS | 35.0% |
! | TCTTTTCTGCTCAATCAAGA+GGG | - | chr3_2:47380708-47380727 | None:intergenic | 35.0% |
! | ATCTTTTCTGCTCAATCAAG+AGG | - | chr3_2:47380709-47380728 | None:intergenic | 35.0% |
CTTGATTGAGCAGAAAAGAT+TGG | + | chr3_2:47380709-47380728 | Msa0407990:intron | 35.0% | |
TGATTGAGCAGAAAAGATTG+GGG | + | chr3_2:47380711-47380730 | Msa0407990:intron | 35.0% | |
! | GTTTTTGTCTTAGTCTGTTG+AGG | + | chr3_2:47380806-47380825 | Msa0407990:intron | 35.0% |
GAATATTCTTGACCATGAGA+TGG | - | chr3_2:47380977-47380996 | None:intergenic | 35.0% | |
TAATAAAGCCACATTCTCCT+AGG | + | chr3_2:47381039-47381058 | Msa0407990:intron | 35.0% | |
GGAACAAATTACAAATGGAG+AGG | - | chr3_2:47381534-47381553 | None:intergenic | 35.0% | |
TCTCTCCAAATTGCAACAAA+TGG | - | chr3_2:47381201-47381220 | None:intergenic | 35.0% | |
TCTCTCCAAATTGCAACAAA+TGG | + | chr3_2:47381201-47381220 | Msa0407990:intron | 35.0% | |
GGAACAAAATACAAATGGAG+AGG | + | chr3_2:47381222-47381241 | Msa0407990:intron | 35.0% | |
GGAACAAATTACAAATGGAG+AGG | - | chr3_2:47381534-47381553 | None:intergenic | 35.0% | |
TCTCTCCAAATTGCAACAAA+TGG | - | chr3_2:47381201-47381220 | None:intergenic | 35.0% | |
GACACAAAAAAGTAAGTGGT+GGG | - | chr3_2:47381489-47381508 | None:intergenic | 35.0% | |
AGACACAAAAAAGTAAGTGG+TGG | - | chr3_2:47381490-47381509 | None:intergenic | 35.0% | |
TCTCTCCAAATTGCAACAAA+TGG | + | chr3_2:47381201-47381220 | Msa0407990:intron | 35.0% | |
GGAACAAATTACAAATGGAG+AGG | + | chr3_2:47381534-47381553 | Msa0407990:intron | 35.0% | |
TCTCTTAATCCATCACATAG+TGG | - | chr3_2:47381731-47381750 | None:intergenic | 35.0% | |
!! | CTATGTGATGGATTAAGAGA+CGG | + | chr3_2:47381731-47381750 | Msa0407990:intron | 35.0% |
!! | TATGTGATGGATTAAGAGAC+GGG | + | chr3_2:47381732-47381751 | Msa0407990:intron | 35.0% |
!!! | ACCCGTCTCTTTTTTTTTTG+TGG | - | chr3_2:47381836-47381855 | None:intergenic | 35.0% |
ATATCATATACAGAGGGCAA+GGG | + | chr3_2:47381958-47381977 | Msa0407990:intron | 35.0% | |
ATTAATGAGGTCCTAGCAAA+TGG | + | chr3_2:47382021-47382040 | Msa0407990:CDS | 35.0% | |
CTTGAAGCAAAAATCAGCAT+AGG | - | chr3_2:47382414-47382433 | None:intergenic | 35.0% | |
CTTCAAGACATTTGGAGATA+GGG | + | chr3_2:47382427-47382446 | Msa0407990:CDS | 35.0% | |
ATGGTATCCATTAATGGTGT+AGG | - | chr3_2:47382486-47382505 | None:intergenic | 35.0% | |
! | TACACCATTAATGGATACCA+TGG | + | chr3_2:47382485-47382504 | Msa0407990:CDS | 35.0% |
! | ACATATTTAGAGCATCTTGC+AGG | - | chr3_2:47382524-47382543 | None:intergenic | 35.0% |
! | GCAAGATGCTCTAAATATGT+TGG | + | chr3_2:47382524-47382543 | Msa0407990:CDS | 35.0% |
TATGTTGGAAATTGCTCTAC+TGG | + | chr3_2:47382539-47382558 | Msa0407990:CDS | 35.0% | |
AAGTGATGAGCAACAATGTA+GGG | - | chr3_2:47382581-47382600 | None:intergenic | 35.0% | |
AAAGTGATGAGCAACAATGT+AGG | - | chr3_2:47382582-47382601 | None:intergenic | 35.0% | |
!! | ATCGATCTTAAAAGTGTCAG+CGG | - | chr3_2:47382847-47382866 | None:intergenic | 35.0% |
!!! | TGTCACTCGACATTTTTTAG+TGG | - | chr3_2:47382902-47382921 | None:intergenic | 35.0% |
! | TTTCCTTTTTGATGAGCCTA+TGG | - | chr3_2:47383049-47383068 | None:intergenic | 35.0% |
GGATAGTGACCATATGTAAT+TGG | - | chr3_2:47383460-47383479 | None:intergenic | 35.0% | |
AAGGATGATGTCATTGTTTG+TGG | - | chr3_2:47383481-47383500 | None:intergenic | 35.0% | |
ACAAACAATGACATCATCCT+TGG | + | chr3_2:47383480-47383499 | Msa0407990:CDS | 35.0% | |
CAAACAATGACATCATCCTT+GGG | + | chr3_2:47383481-47383500 | Msa0407990:CDS | 35.0% | |
GAAGTAGGTCATGTTGATAT+GGG | - | chr3_2:47383617-47383636 | None:intergenic | 35.0% | |
TGAAGTAGGTCATGTTGATA+TGG | - | chr3_2:47383618-47383637 | None:intergenic | 35.0% | |
TTGATCACAGCAATGAAGAA+TGG | + | chr3_2:47383773-47383792 | Msa0407990:intron | 35.0% | |
ATGAAGAATGGTGTAGCTAT+TGG | + | chr3_2:47383785-47383804 | Msa0407990:CDS | 35.0% | |
!!! | TTGGCTTCTTTGTTTTTGGT+TGG | + | chr3_2:47383861-47383880 | Msa0407990:intron | 35.0% |
TGATAAAAGACACCACCAAA+GGG | - | chr3_2:47384190-47384209 | None:intergenic | 35.0% | |
TTGATAAAAGACACCACCAA+AGG | - | chr3_2:47384191-47384210 | None:intergenic | 35.0% | |
! | ATAGAAGACACCTTTTGTGA+AGG | - | chr3_2:47384330-47384349 | None:intergenic | 35.0% |
TTGCTTCACTAAGTATCAGA+AGG | - | chr3_2:47384475-47384494 | None:intergenic | 35.0% | |
! | AACTTTATGGTTTGTGCAGA+CGG | + | chr3_2:47384495-47384514 | Msa0407990:intron | 35.0% |
ACAAGATGATGAATTCCCTT+CGG | - | chr3_2:47384544-47384563 | None:intergenic | 35.0% | |
! | TTTTCAGTAATGTACACTGG+TGG | - | chr3_2:47384595-47384614 | None:intergenic | 35.0% |
! | CCATTTTCAGTAATGTACAC+TGG | - | chr3_2:47384598-47384617 | None:intergenic | 35.0% |
CCAGTGTACATTACTGAAAA+TGG | + | chr3_2:47384595-47384614 | Msa0407990:CDS | 35.0% | |
AGTATAGAGACACCCATATT+AGG | + | chr3_2:47384656-47384675 | Msa0407990:intron | 35.0% | |
AGAAGCAATAAGTCGCTATA+AGG | + | chr3_2:47384680-47384699 | Msa0407990:intron | 35.0% | |
TCGCTATAAGGAGGATAATT+TGG | + | chr3_2:47384692-47384711 | Msa0407990:intron | 35.0% | |
AAACTATGGAGATACCCTAA+TGG | + | chr3_2:47384816-47384835 | Msa0407990:intron | 35.0% | |
ATTTAGACGTGTGAAGCAAA+AGG | + | chr3_2:47384911-47384930 | Msa0407990:intron | 35.0% | |
CGAATTGGGTAAACATTTCT+TGG | - | chr3_2:47385046-47385065 | None:intergenic | 35.0% | |
ACGGAAAATGGGTAGAAATT+AGG | - | chr3_2:47385190-47385209 | None:intergenic | 35.0% | |
TCATTGAGTGTCATGTTCAT+GGG | - | chr3_2:47385219-47385238 | None:intergenic | 35.0% | |
ATCATTGAGTGTCATGTTCA+TGG | - | chr3_2:47385220-47385239 | None:intergenic | 35.0% | |
! | AATCAAAGGAGGTCACTTTA+GGG | - | chr3_2:47385322-47385341 | None:intergenic | 35.0% |
! | AAATCAAAGGAGGTCACTTT+AGG | - | chr3_2:47385323-47385342 | None:intergenic | 35.0% |
AGAGAAACTTGGGAAATCAA+AGG | - | chr3_2:47385336-47385355 | None:intergenic | 35.0% | |
! | TCCTAAATCGTGTCACTATA+AGG | + | chr3_2:47385391-47385410 | Msa0407990:intron | 35.0% |
TACTAGCTGGTAGAAAATTG+TGG | - | chr3_2:47385479-47385498 | None:intergenic | 35.0% | |
! | TGTGAATATGTTTCAGGTGT+TGG | + | chr3_2:47385779-47385798 | Msa0407990:intron | 35.0% |
GATCCTAATACCATCTTTAC+GGG | - | chr3_2:47385840-47385859 | None:intergenic | 35.0% | |
GTTCATACTTTATCGCTTGA+AGG | - | chr3_2:47385892-47385911 | None:intergenic | 35.0% | |
CAAGTAGGCAGCAAAATATT+AGG | + | chr3_2:47386266-47386285 | Msa0407990:intron | 35.0% | |
! | TCGAACTCGCATATTTTCAT+AGG | + | chr3_2:47386337-47386356 | Msa0407990:intron | 35.0% |
! | CGAACTCGCATATTTTCATA+GGG | + | chr3_2:47386338-47386357 | Msa0407990:intron | 35.0% |
! | GAACTCGCATATTTTCATAG+GGG | + | chr3_2:47386339-47386358 | Msa0407990:intron | 35.0% |
! | ATTTTCCGACAGCTATGAAT+GGG | + | chr3_2:47386500-47386519 | Msa0407990:CDS | 35.0% |
CTGCAAAAATTCCTTCTCAA+GGG | + | chr3_2:47386609-47386628 | Msa0407990:CDS | 35.0% | |
! | ATTTGAGTTATCCCTTGAGA+AGG | - | chr3_2:47386623-47386642 | None:intergenic | 35.0% |
ACTAAGGTGACATTGGAATT+TGG | - | chr3_2:47386697-47386716 | None:intergenic | 35.0% | |
TCTCAATACTAAGGTGACAT+TGG | - | chr3_2:47386704-47386723 | None:intergenic | 35.0% | |
GAAAAAAGATAGAGGAGGGA+AGG | - | chr3_2:47378127-47378146 | None:intergenic | 40.0% | |
CCAGAGAAAAAAGATAGAGG+AGG | - | chr3_2:47378132-47378151 | None:intergenic | 40.0% | |
!!! | CCTCCTCTATCTTTTTTCTC+TGG | + | chr3_2:47378129-47378148 | Msa0407990:CDS | 40.0% |
!!! | ACACTTTTTGCTGTTGTCAC+CGG | + | chr3_2:47378154-47378173 | Msa0407990:CDS | 40.0% |
AATGAAGCAGCATAGTGACT+TGG | - | chr3_2:47378202-47378221 | None:intergenic | 40.0% | |
! | ACTATGCTGCTTCATTCAAC+AGG | + | chr3_2:47378206-47378225 | Msa0407990:CDS | 40.0% |
! | AATTGGTTCTTCTGCTTACC+AGG | + | chr3_2:47378258-47378277 | Msa0407990:CDS | 40.0% |
CATAAAGGCCACTGTATTTC+CGG | + | chr3_2:47378365-47378384 | Msa0407990:intron | 40.0% | |
! | TTTTTACATTGGCCCAAGTC+GGG | - | chr3_2:47379145-47379164 | None:intergenic | 40.0% |
CTAATTTACGTTGAGTCCCA+AGG | + | chr3_2:47379376-47379395 | Msa0407990:intron | 40.0% | |
ATTATGTTGCAGCGAACCTT+GGG | - | chr3_2:47379395-47379414 | None:intergenic | 40.0% | |
AATTATGTTGCAGCGAACCT+TGG | - | chr3_2:47379396-47379415 | None:intergenic | 40.0% | |
GTAAATGCACGTGAAACGTT+AGG | - | chr3_2:47379830-47379849 | None:intergenic | 40.0% | |
CTATTTGCCACAATTCAAGG+AGG | - | chr3_2:47379973-47379992 | None:intergenic | 40.0% | |
GCACTATTTGCCACAATTCA+AGG | - | chr3_2:47379976-47379995 | None:intergenic | 40.0% | |
GGCAAATAGTGCATTGTGAT+TGG | + | chr3_2:47379984-47380003 | Msa0407990:intron | 40.0% | |
!!! | ACACGGCCTCATATTTTTTG+AGG | - | chr3_2:47380112-47380131 | None:intergenic | 40.0% |
ATTATCTCCACCAGGATACA+AGG | - | chr3_2:47380430-47380449 | None:intergenic | 40.0% | |
TTGCTTACATTATCTCCACC+AGG | - | chr3_2:47380438-47380457 | None:intergenic | 40.0% | |
!! | GAAGGAGCATCAGATATAGA+TGG | + | chr3_2:47380502-47380521 | Msa0407990:CDS | 40.0% |
ACCTTCACTAAACAACATCC+AGG | + | chr3_2:47380547-47380566 | Msa0407990:CDS | 40.0% | |
! | ACCTGGATGTTGTTTAGTGA+AGG | - | chr3_2:47380551-47380570 | None:intergenic | 40.0% |
GACCATAGCAGTGGTAATAT+TGG | + | chr3_2:47380733-47380752 | Msa0407990:CDS | 40.0% | |
CTCCAATATTACCACTGCTA+TGG | - | chr3_2:47380738-47380757 | None:intergenic | 40.0% | |
CATACAGATTCTCCATCTCA+TGG | + | chr3_2:47380962-47380981 | Msa0407990:CDS | 40.0% | |
TGTGTTAACATCGGATTCCT+AGG | - | chr3_2:47381059-47381078 | None:intergenic | 40.0% | |
GGAGAGAACTTAAAATGGAG+TGG | - | chr3_2:47381300-47381319 | None:intergenic | 40.0% | |
GATATCATATACAGAGGGCA+AGG | + | chr3_2:47381957-47381976 | Msa0407990:intron | 40.0% | |
GCTTCAAGACATTTGGAGAT+AGG | + | chr3_2:47382426-47382445 | Msa0407990:CDS | 40.0% | |
TTGGAGATAGGGTTAAGCAT+TGG | + | chr3_2:47382438-47382457 | Msa0407990:CDS | 40.0% | |
TGGAGATAGGGTTAAGCATT+GGG | + | chr3_2:47382439-47382458 | Msa0407990:CDS | 40.0% | |
CCATTAATGGTGTAGGAAAC+AGG | - | chr3_2:47382479-47382498 | None:intergenic | 40.0% | |
CCTGTTTCCTACACCATTAA+TGG | + | chr3_2:47382476-47382495 | Msa0407990:CDS | 40.0% | |
! | ACCATTAATGGATACCATGG+AGG | + | chr3_2:47382488-47382507 | Msa0407990:CDS | 40.0% |
! | TATTTAGAGCATCTTGCAGG+TGG | - | chr3_2:47382521-47382540 | None:intergenic | 40.0% |
TGCTGCAGCCAAATTGTATA+AGG | + | chr3_2:47382616-47382635 | Msa0407990:CDS | 40.0% | |
TTGCTCATTCACTGCATCAA+CGG | + | chr3_2:47382772-47382791 | Msa0407990:intron | 40.0% | |
TGTCGATGAAAAATGTCGAG+TGG | - | chr3_2:47382808-47382827 | None:intergenic | 40.0% | |
TCGGCAACACTATTGGAATA+TGG | - | chr3_2:47383106-47383125 | None:intergenic | 40.0% | |
TTTGTGATCGGCAACACTAT+TGG | - | chr3_2:47383113-47383132 | None:intergenic | 40.0% | |
! | TCTACTTGCAGCTTTGTGAT+CGG | - | chr3_2:47383125-47383144 | None:intergenic | 40.0% |
CAGACTCCCAAAATTCACAA+AGG | + | chr3_2:47383507-47383526 | Msa0407990:CDS | 40.0% | |
TAGGTCATGTTGATATGGGT+TGG | - | chr3_2:47383613-47383632 | None:intergenic | 40.0% | |
TGCTTGCATATCAGTGAAGT+AGG | - | chr3_2:47383632-47383651 | None:intergenic | 40.0% | |
GCTATATTATGATGCGGTTG+TGG | + | chr3_2:47383985-47384004 | Msa0407990:intron | 40.0% | |
! | TTTTGTTACAAGCCACCCTT+TGG | + | chr3_2:47384172-47384191 | Msa0407990:intron | 40.0% |
! | AGAAGGCCCAAAGCATTATA+TGG | - | chr3_2:47384458-47384477 | None:intergenic | 40.0% |
AGCAATAAGTCGCTATAAGG+AGG | + | chr3_2:47384683-47384702 | Msa0407990:intron | 40.0% | |
TACCCAATTCGGTCTAAGAA+TGG | + | chr3_2:47385055-47385074 | Msa0407990:intron | 40.0% | |
GTCTAAGAATGGCCTACTTT+GGG | + | chr3_2:47385066-47385085 | Msa0407990:intron | 40.0% | |
TCTAAGAATGGCCTACTTTG+GGG | + | chr3_2:47385067-47385086 | Msa0407990:intron | 40.0% | |
ATGGGAAGAGAACGGAAAAT+GGG | - | chr3_2:47385201-47385220 | None:intergenic | 40.0% | |
TCATGTTCATGGGAAGAGAA+CGG | - | chr3_2:47385209-47385228 | None:intergenic | 40.0% | |
GAAACTTGGGAAATCAAAGG+AGG | - | chr3_2:47385333-47385352 | None:intergenic | 40.0% | |
GCCTTATAGTGACACGATTT+AGG | - | chr3_2:47385395-47385414 | None:intergenic | 40.0% | |
!!! | CATAGCACGATTTTGGGATA+TGG | - | chr3_2:47385441-47385460 | None:intergenic | 40.0% |
CTAGGTAGGGTTAAGAACTA+TGG | - | chr3_2:47385660-47385679 | None:intergenic | 40.0% | |
TCCAGACATTTAGCTAGGTA+GGG | - | chr3_2:47385673-47385692 | None:intergenic | 40.0% | |
TATGGTCCAGACATTTAGCT+AGG | - | chr3_2:47385678-47385697 | None:intergenic | 40.0% | |
!! | TTTCAGGTGTTGGTCAATCA+AGG | + | chr3_2:47385789-47385808 | Msa0407990:intron | 40.0% |
TAGCCCGTAAAGATGGTATT+AGG | + | chr3_2:47385834-47385853 | Msa0407990:CDS | 40.0% | |
! | GGAATTTGAGATGGCTATCA+TGG | - | chr3_2:47385868-47385887 | None:intergenic | 40.0% |
CTTGAAGGAGGAATTTGAGA+TGG | - | chr3_2:47385877-47385896 | None:intergenic | 40.0% | |
CATACTTTATCGCTTGAAGG+AGG | - | chr3_2:47385889-47385908 | None:intergenic | 40.0% | |
! | GAGATACTTGGTTTGAGTCA+CGG | + | chr3_2:47386171-47386190 | Msa0407990:intron | 40.0% |
ATATCTTGTCGAACATGCTC+AGG | - | chr3_2:47386199-47386218 | None:intergenic | 40.0% | |
AGAGATGGTGCAAATGTGAA+GGG | + | chr3_2:47386462-47386481 | Msa0407990:intron | 40.0% | |
ATGTGAAGGGATACTATGCT+TGG | + | chr3_2:47386475-47386494 | Msa0407990:CDS | 40.0% | |
! | CATTTTCCGACAGCTATGAA+TGG | + | chr3_2:47386499-47386518 | Msa0407990:CDS | 40.0% |
!! | ATCCCAAGTACTCTGCTTTT+TGG | + | chr3_2:47386586-47386605 | Msa0407990:CDS | 40.0% |
! | AGCCAAAAAGCAGAGTACTT+GGG | - | chr3_2:47386591-47386610 | None:intergenic | 40.0% |
GCTGCAAAAATTCCTTCTCA+AGG | + | chr3_2:47386608-47386627 | Msa0407990:CDS | 40.0% | |
CACATGTTGTGATGCAGTTC+CGG | - | chr3_2:47378176-47378195 | None:intergenic | 45.0% | |
CGAAAACACCGGAAATACAG+TGG | - | chr3_2:47378376-47378395 | None:intergenic | 45.0% | |
CAGACAATGGCCATGAAATG+TGG | + | chr3_2:47378666-47378685 | Msa0407990:intron | 45.0% | |
TTACCGTGTTTGATCGCACA+CGG | - | chr3_2:47380129-47380148 | None:intergenic | 45.0% | |
AACATGCTCAAGACCGTCAT+TGG | + | chr3_2:47380148-47380167 | Msa0407990:intron | 45.0% | |
GCATCAGATATAGATGGGAG+AGG | + | chr3_2:47380508-47380527 | Msa0407990:CDS | 45.0% | |
ATGGGAGAGGACCAAGTATA+TGG | + | chr3_2:47380521-47380540 | Msa0407990:CDS | 45.0% | |
TGGGAGAGGACCAAGTATAT+GGG | + | chr3_2:47380522-47380541 | Msa0407990:CDS | 45.0% | |
!! | GTGAAGGTGTCCCATATACT+TGG | - | chr3_2:47380535-47380554 | None:intergenic | 45.0% |
CTCAATCAAGAGGGAAAGAG+AGG | - | chr3_2:47380699-47380718 | None:intergenic | 45.0% | |
ATCGGATTCCTAGGAGAATG+TGG | - | chr3_2:47381050-47381069 | None:intergenic | 45.0% | |
! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr3_2:47381770-47381789 | Msa0407990:intron | 45.0% |
AAGGGAGCAGTCAATCCTAT+GGG | + | chr3_2:47381976-47381995 | Msa0407990:CDS | 45.0% | |
GCCTCCATGGTATCCATTAA+TGG | - | chr3_2:47382492-47382511 | None:intergenic | 45.0% | |
GTGCCATAGGCTCATCAAAA+AGG | + | chr3_2:47383043-47383062 | Msa0407990:intron | 45.0% | |
!! | TTTTGGGAGTCTGTTACCCA+AGG | - | chr3_2:47383500-47383519 | None:intergenic | 45.0% |
!! | GTCATGTTGATATGGGTTGG+TGG | - | chr3_2:47383610-47383629 | None:intergenic | 45.0% |
TTATGATGCGGTTGTGGACA+TGG | + | chr3_2:47383991-47384010 | Msa0407990:intron | 45.0% | |
GCAAGCTAACACACCAATAG+AGG | - | chr3_2:47384035-47384054 | None:intergenic | 45.0% | |
TAAAAGACACCACCAAAGGG+TGG | - | chr3_2:47384187-47384206 | None:intergenic | 45.0% | |
! | TTGTGCAGACGGATTTGAAC+TGG | + | chr3_2:47384506-47384525 | Msa0407990:intron | 45.0% |
TGGCTATACGTCTATCCGAA+GGG | + | chr3_2:47384526-47384545 | Msa0407990:CDS | 45.0% | |
GGCCATTCTTAGACCGAATT+GGG | - | chr3_2:47385060-47385079 | None:intergenic | 45.0% | |
AGGCCATTCTTAGACCGAAT+TGG | - | chr3_2:47385061-47385080 | None:intergenic | 45.0% | |
GGTCTAAGAATGGCCTACTT+TGG | + | chr3_2:47385065-47385084 | Msa0407990:intron | 45.0% | |
CTAAGAATGGCCTACTTTGG+GGG | + | chr3_2:47385068-47385087 | Msa0407990:intron | 45.0% | |
ATTTCTCTCTCCCCCAAAGT+AGG | - | chr3_2:47385081-47385100 | None:intergenic | 45.0% | |
CATGGGAAGAGAACGGAAAA+TGG | - | chr3_2:47385202-47385221 | None:intergenic | 45.0% | |
!! | ACTTTAGGGTTGAGGGTCTT+TGG | - | chr3_2:47385308-47385327 | None:intergenic | 45.0% |
GGTAGAAAATTGTGGCGCAA+TGG | - | chr3_2:47385471-47385490 | None:intergenic | 45.0% | |
GTTTGGGAAGTTGACAATCG+TGG | - | chr3_2:47385532-47385551 | None:intergenic | 45.0% | |
ACCCTACCTAGCTAAATGTC+TGG | + | chr3_2:47385669-47385688 | Msa0407990:intron | 45.0% | |
GTCCAGACATTTAGCTAGGT+AGG | - | chr3_2:47385674-47385693 | None:intergenic | 45.0% | |
TGTTCGACTGAGAAGTCACT+TGG | + | chr3_2:47386124-47386143 | Msa0407990:intron | 45.0% | |
CTCTTCAACCTCGAGATACT+TGG | + | chr3_2:47386159-47386178 | Msa0407990:intron | 45.0% | |
GACTCAAACCAAGTATCTCG+AGG | - | chr3_2:47386170-47386189 | None:intergenic | 45.0% | |
! | GGTCCTTTTTGTTGCAGAGA+TGG | + | chr3_2:47386447-47386466 | Msa0407990:intron | 45.0% |
GCACCATCTCTGCAACAAAA+AGG | - | chr3_2:47386453-47386472 | None:intergenic | 45.0% | |
CAGAGATGGTGCAAATGTGA+AGG | + | chr3_2:47386461-47386480 | Msa0407990:intron | 45.0% | |
TGCATCCCATTCATAGCTGT+CGG | - | chr3_2:47386508-47386527 | None:intergenic | 45.0% | |
GCAGGCTACACAATACGATT+TGG | + | chr3_2:47386525-47386544 | Msa0407990:CDS | 45.0% | |
! | CAGCCAAAAAGCAGAGTACT+TGG | - | chr3_2:47386592-47386611 | None:intergenic | 45.0% |
!!! | ACTAATTTTTTTTATATATA+CGG | + | chr3_2:47382149-47382168 | Msa0407990:intron | 5.0% |
!! | TAGAAAATAATAAATTTAAT+AGG | - | chr3_2:47382313-47382332 | None:intergenic | 5.0% |
!!! | ATTCTTTATTTTTTAAATTA+AGG | - | chr3_2:47383204-47383223 | None:intergenic | 5.0% |
!! | AAAAAAAAAAAGATTATTAT+TGG | + | chr3_2:47383249-47383268 | Msa0407990:intron | 5.0% |
GGAAGGACCTGTAGCTTTCA+TGG | - | chr3_2:47378110-47378129 | None:intergenic | 50.0% | |
AAATTTGTCCGGTCCCGACT+TGG | + | chr3_2:47379129-47379148 | Msa0407990:intron | 50.0% | |
AATTTGTCCGGTCCCGACTT+GGG | + | chr3_2:47379130-47379149 | Msa0407990:intron | 50.0% | |
! | AGGAGGTGTGGCTGGAAAAT+AGG | - | chr3_2:47379956-47379975 | None:intergenic | 50.0% |
! | ACAATTCAAGGAGGTGTGGC+TGG | - | chr3_2:47379964-47379983 | None:intergenic | 50.0% |
AGCCACACCTCCTTGAATTG+TGG | + | chr3_2:47379963-47379982 | Msa0407990:intron | 50.0% | |
TGCCACAATTCAAGGAGGTG+TGG | - | chr3_2:47379968-47379987 | None:intergenic | 50.0% | |
AAGATTGGGGACCATAGCAG+TGG | + | chr3_2:47380724-47380743 | Msa0407990:CDS | 50.0% | |
GGTGGGATCCACTTAGTGAT+AGG | + | chr3_2:47381462-47381481 | Msa0407990:intron | 50.0% | |
! | TGGTGGGTCCTATCACTAAG+TGG | - | chr3_2:47381473-47381492 | None:intergenic | 50.0% |
CAAGGGAGCAGTCAATCCTA+TGG | + | chr3_2:47381975-47381994 | Msa0407990:CDS | 50.0% | |
!! | GAGGGCGTTTACCATTTGCT+AGG | - | chr3_2:47382035-47382054 | None:intergenic | 50.0% |
!! | TGGTGTAGCTATTGGCTCCT+CGG | + | chr3_2:47383793-47383812 | Msa0407990:CDS | 50.0% |
TGTTACAAGCCACCCTTTGG+TGG | + | chr3_2:47384175-47384194 | Msa0407990:intron | 50.0% | |
CTGGCTATACGTCTATCCGA+AGG | + | chr3_2:47384525-47384544 | Msa0407990:CDS | 50.0% | |
TTGGTGAGCGTTCTGTTGAG+AGG | - | chr3_2:47385289-47385308 | None:intergenic | 50.0% | |
!! | GGAGGTCACTTTAGGGTTGA+GGG | - | chr3_2:47385315-47385334 | None:intergenic | 50.0% |
!! | AGGAGGTCACTTTAGGGTTG+AGG | - | chr3_2:47385316-47385335 | None:intergenic | 50.0% |
ATGCAGGTGTAGCTACTAGC+TGG | - | chr3_2:47385492-47385511 | None:intergenic | 50.0% | |
! | TCTTTACGGGCTACGTTGAC+TGG | - | chr3_2:47385827-47385846 | None:intergenic | 50.0% |
GTCAACGTAGCCCGTAAAGA+TGG | + | chr3_2:47385827-47385846 | Msa0407990:CDS | 50.0% | |
GACAGCTATGAATGGGATGC+AGG | + | chr3_2:47386507-47386526 | Msa0407990:CDS | 50.0% | |
ACTGCGGCCATGAAAGCTAC+AGG | + | chr3_2:47378100-47378119 | Msa0407990:exon | 55.0% | |
AGGCCGTGTGCGATCAAACA+CGG | + | chr3_2:47380123-47380142 | Msa0407990:intron | 55.0% | |
CCAACTGAGCTAAGCTCACG+AGG | - | chr3_2:47381768-47381787 | None:intergenic | 55.0% | |
CCTCGTGAGCTTAGCTCAGT+TGG | + | chr3_2:47381765-47381784 | Msa0407990:intron | 55.0% | |
ACATTGGCCCAAGTCGGGAC+CGG | - | chr3_2:47379140-47379159 | None:intergenic | 60.0% | |
TGTGGTCGGAGTTCGAACCC+CGG | - | chr3_2:47381818-47381837 | None:intergenic | 60.0% | |
!! | CAGGTGGAGAAGTGCCTCCA+TGG | - | chr3_2:47382505-47382524 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 47378089 | 47386806 | 47378089 | ID=Msa0407990;Name=Msa0407990 |
chr3_2 | mRNA | 47378089 | 47386806 | 47378089 | ID=Msa0407990-mRNA-1;Parent=Msa0407990;Name=Msa0407990-mRNA-1;_AED=0.14;_eAED=0.14;_QI=20|1|1|1|1|1|13|171|511 |
chr3_2 | exon | 47378089 | 47378279 | 47378089 | ID=Msa0407990-mRNA-1:exon:9079;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47380499 | 47380568 | 47380499 | ID=Msa0407990-mRNA-1:exon:9080;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47380722 | 47380780 | 47380722 | ID=Msa0407990-mRNA-1:exon:9081;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47380925 | 47381000 | 47380925 | ID=Msa0407990-mRNA-1:exon:9082;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47381971 | 47382042 | 47381971 | ID=Msa0407990-mRNA-1:exon:9083;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47382178 | 47382265 | 47382178 | ID=Msa0407990-mRNA-1:exon:9084;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47382397 | 47382649 | 47382397 | ID=Msa0407990-mRNA-1:exon:9085;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47383052 | 47383167 | 47383052 | ID=Msa0407990-mRNA-1:exon:9086;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47383447 | 47383661 | 47383447 | ID=Msa0407990-mRNA-1:exon:9087;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47383783 | 47383814 | 47383783 | ID=Msa0407990-mRNA-1:exon:9088;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47384514 | 47384616 | 47384514 | ID=Msa0407990-mRNA-1:exon:9089;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47385795 | 47385903 | 47385795 | ID=Msa0407990-mRNA-1:exon:9090;Parent=Msa0407990-mRNA-1 |
chr3_2 | exon | 47386464 | 47386806 | 47386464 | ID=Msa0407990-mRNA-1:exon:9091;Parent=Msa0407990-mRNA-1 |
chr3_2 | five_prime_UTR | 47378089 | 47378108 | 47378089 | ID=Msa0407990-mRNA-1:five_prime_utr;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47378109 | 47378279 | 47378109 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47380499 | 47380568 | 47380499 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47380722 | 47380780 | 47380722 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47380925 | 47381000 | 47380925 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47381971 | 47382042 | 47381971 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47382178 | 47382265 | 47382178 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47382397 | 47382649 | 47382397 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47383052 | 47383167 | 47383052 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47383447 | 47383661 | 47383447 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47383783 | 47383814 | 47383783 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47384514 | 47384616 | 47384514 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47385795 | 47385903 | 47385795 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | CDS | 47386464 | 47386635 | 47386464 | ID=Msa0407990-mRNA-1:cds;Parent=Msa0407990-mRNA-1 |
chr3_2 | three_prime_UTR | 47386636 | 47386806 | 47386636 | ID=Msa0407990-mRNA-1:three_prime_utr;Parent=Msa0407990-mRNA-1 |
Gene Sequence |
Protein sequence |