AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0411530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411530 MtrunA17_Chr3g0102801 95.133 863 36 2 61 917 30 892 0.0 1570
Msa0411530 MtrunA17_Chr3g0102811 92.188 64 5 0 1 64 1 64 5.31e-33 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411530 AT3G13225.2 38.629 963 472 32 1 916 1 891 4.89e-149 463
Msa0411530 AT3G13225.1 37.006 835 420 29 118 916 6 770 6.73e-112 362
Msa0411530 AT3G13225.3 37.006 835 420 29 118 916 6 770 6.73e-112 362

Find 267 sgRNAs with CRISPR-Local

Find 581 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTCAGTTGAAGCTTTAA+AGG 0.120334 3_2:-53789858 Msa0411530:CDS
CATGCTCTCATCTGCAATTC+TGG 0.150878 3_2:-53790628 Msa0411530:CDS
GATCATCTTTGCTTCCATTC+TGG 0.155586 3_2:-53790102 Msa0411530:CDS
CGAAGCATCCGTTTGATCTT+TGG 0.175979 3_2:+53790875 None:intergenic
GGTTGATTCCTCCGGATTTA+TGG 0.197473 3_2:+53789730 None:intergenic
GTACCTGTCGCTGAAGAATT+TGG 0.203543 3_2:-53789980 Msa0411530:CDS
CATATTACCTTCATTTCTTT+TGG 0.213178 3_2:+53786596 None:intergenic
CCTTTGGCGCTTTCTTTCTA+AGG 0.233122 3_2:+53787996 None:intergenic
GTGGGAAGTGCCTCAGGTTT+TGG 0.238735 3_2:-53790742 Msa0411530:CDS
CCCAATTCACCCTCTTCTTC+AGG 0.252049 3_2:-53792133 Msa0411530:intron
CGGGGTGAACATTGTTATTC+TGG 0.253079 3_2:-53786638 Msa0411530:three_prime_UTR
CGAAAATTGAAAACCAAGTT+AGG 0.264021 3_2:+53794479 None:intergenic
GGAATGTACAAATGAAAATA+AGG 0.264826 3_2:-53790505 Msa0411530:CDS
ATCATCTTTGCTTCCATTCT+GGG 0.267979 3_2:-53790101 Msa0411530:CDS
TTGAAAATTAGCATTGTCTT+TGG 0.276650 3_2:+53787853 None:intergenic
CTATCTGGTTTCAAATAGTT+AGG 0.282512 3_2:-53786735 Msa0411530:three_prime_UTR
GAATATTTGCTTCTCTTATT+CGG 0.287245 3_2:-53786764 Msa0411530:three_prime_UTR
CTTACTTCTGAAGTTTCTAA+TGG 0.292040 3_2:-53789893 Msa0411530:CDS
GTGGTGTTAGTGGGGCTGAT+AGG 0.299517 3_2:-53788970 Msa0411530:CDS
GGAGGCATATGCTCATTATC+TGG 0.301534 3_2:+53789479 None:intergenic
GCCTCAAAGAAGGTTTATTA+TGG 0.304035 3_2:-53786941 Msa0411530:CDS
TACCTGTCGCTGAAGAATTT+GGG 0.309088 3_2:-53789979 Msa0411530:CDS
TTGGCAAGTTCAACAATATC+TGG 0.310483 3_2:+53787635 None:intergenic
CCAAGGGTCTCCCAACTAAT+TGG 0.314890 3_2:-53787616 Msa0411530:CDS
CCTCGCTACATCCATTCGTT+TGG 0.322905 3_2:+53790526 None:intergenic
CACACCAACTGTAACATTAT+CGG 0.330919 3_2:+53790662 None:intergenic
ACCTGAAGAAGAGGGTGAAT+TGG 0.333708 3_2:+53792132 None:intergenic
TACTACTGGAATGTTCAAAC+TGG 0.345090 3_2:-53790774 Msa0411530:CDS
GATATCAATATTAGTGATTC+TGG 0.345634 3_2:-53788992 Msa0411530:CDS
GATTCTGTTGCTCAGAATAA+TGG 0.349103 3_2:-53790999 Msa0411530:CDS
GGACTTTCACTATATATGTT+AGG 0.356564 3_2:+53789215 None:intergenic
CTCGCTACATCCATTCGTTT+GGG 0.362427 3_2:+53790527 None:intergenic
AAAGAATGGTATTCAATTTG+TGG 0.362790 3_2:+53789563 None:intergenic
TGGTAATTTGCAAAATGAAA+TGG 0.369208 3_2:-53790901 Msa0411530:CDS
GTCCCTACTAGCAACATATA+TGG 0.371422 3_2:-53789281 Msa0411530:CDS
TATGTTGGAGATCATTCAAT+AGG 0.373875 3_2:-53790426 Msa0411530:CDS
TGTCCATATATGTTGCTAGT+AGG 0.377443 3_2:+53789278 None:intergenic
GCTCATCTCATCTCGTTGGC+CGG 0.389265 3_2:+53786888 None:intergenic
CTTATTCGGAGTATACTATC+TGG 0.390922 3_2:-53786750 Msa0411530:three_prime_UTR
TTTAGGTCGCTTTCATCCTA+TGG 0.397961 3_2:-53790124 Msa0411530:CDS
TGCAAACCTCTATTTCCCTT+TGG 0.400818 3_2:+53787980 None:intergenic
GTACAATTAATACCTCTTCA+TGG 0.404923 3_2:+53791475 None:intergenic
GACTTCGTGGGAAGTGCCTC+AGG 0.405622 3_2:-53790748 Msa0411530:CDS
ACTGGCAGTCATGCGGAAAC+AGG 0.409902 3_2:-53789782 Msa0411530:CDS
GAGGCATATGCTCATTATCT+GGG 0.410690 3_2:+53789480 None:intergenic
ATCCCATCTTACACAGAAAC+AGG 0.416620 3_2:-53789383 Msa0411530:CDS
ACCATAATAAACCTTCTTTG+AGG 0.417538 3_2:+53786940 None:intergenic
TTCAACCTTTGGGTGGTGAT+TGG 0.418179 3_2:-53787835 Msa0411530:intron
CAATATAATCCATCTTATCT+TGG 0.419740 3_2:-53789341 Msa0411530:CDS
AGTGGATCACCGGGTGGAAG+AGG 0.421141 3_2:+53789425 None:intergenic
CCTGAAGAAGAGGGTGAATT+GGG 0.421341 3_2:+53792133 None:intergenic
CATTGGGGAAGATGTTGATA+TGG 0.425927 3_2:-53789690 Msa0411530:CDS
AGTGATTCTGGTGGTGTTAG+TGG 0.428646 3_2:-53788980 Msa0411530:CDS
CAAAGATCAAACGGATGCTT+CGG 0.434602 3_2:-53790874 Msa0411530:CDS
CCCATCATGCTGTTGTGAAT+TGG 0.435328 3_2:+53792159 None:intergenic
TGATCCCATTACTTATTATG+AGG 0.435434 3_2:-53789171 Msa0411530:CDS
TGGTGTTAGTGGGGCTGATA+GGG 0.435688 3_2:-53788969 Msa0411530:CDS
TATATTGCCCAAGTAACAAA+AGG 0.435947 3_2:+53791556 None:intergenic
TATACATTTCCAGGAGAGTT+GGG 0.438945 3_2:-53792217 Msa0411530:intron
ATTTGTGGATTTGACTGAAA+TGG 0.440086 3_2:+53789578 None:intergenic
AGTTGATGCGAGTGTTTCAT+TGG 0.440498 3_2:-53788891 Msa0411530:CDS
ATGAAAATGTGTGTAACATT+GGG 0.441588 3_2:-53789706 Msa0411530:CDS
CTCATTGAAGTCTAATAAGA+AGG 0.442401 3_2:-53788258 Msa0411530:CDS
TCGTCAGGCGGTGGTGGTGG+AGG 0.442881 3_2:+53789461 None:intergenic
AGATAGGCAATATATATGTT+TGG 0.443810 3_2:-53786814 Msa0411530:three_prime_UTR
GTCCATATATGTTGCTAGTA+GGG 0.444568 3_2:+53789279 None:intergenic
GGCGCAACAAATGCATCCTC+AGG 0.447206 3_2:+53789536 None:intergenic
CACCATCTTCCATCCTGAAC+TGG 0.448115 3_2:+53790821 None:intergenic
TGAGCCTCATAATAAGTAAT+GGG 0.448365 3_2:+53789167 None:intergenic
AAAGCCAACATTATTACTAC+TGG 0.449686 3_2:-53790788 Msa0411530:CDS
CTATGCACCTTTGTATCATT+AGG 0.450667 3_2:+53791498 None:intergenic
ATATATATTGCCTATCTCAT+TGG 0.450976 3_2:+53786820 None:intergenic
GACCCGACCCGACCCTAACT+TGG 0.453658 3_2:-53794492 None:intergenic
GCATCAACTGAAACAGTTGC+AGG 0.454427 3_2:+53788905 None:intergenic
TATGCAGGCGGGAGAAGGTC+AGG 0.454733 3_2:-53787733 Msa0411530:intron
CTCATGAGTTTATCTTATGT+TGG 0.455613 3_2:-53790441 Msa0411530:CDS
TCATCGTCAGGCGGTGGTGG+TGG 0.456242 3_2:+53789458 None:intergenic
GGGAGAAGGTCAGGCGCAAG+AGG 0.456892 3_2:-53787724 Msa0411530:CDS
TGGCCTGTTTCTGTGTAAGA+TGG 0.459388 3_2:+53789380 None:intergenic
TAATAAGAAGGTTTCAAGTC+TGG 0.459429 3_2:-53788246 Msa0411530:CDS
GACTCCTGGCCAACACCATT+CGG 0.460959 3_2:+53789950 None:intergenic
ATTCCATTGTCTATTTCTAC+TGG 0.461060 3_2:-53789800 Msa0411530:CDS
GGAATAATCTACAGGTCAAA+GGG 0.461470 3_2:-53790211 Msa0411530:intron
CTCATCTCATCTCGTTGGCC+GGG 0.462364 3_2:+53786889 None:intergenic
GTGGATCACCGGGTGGAAGA+GGG 0.463374 3_2:+53789426 None:intergenic
ATTCGAACACGGAATCCAAT+GGG 0.465619 3_2:-53794335 Msa0411530:exon
GGAGGGATCCATTCATCATC+AGG 0.466170 3_2:+53789509 None:intergenic
GAAAATTTCGATGAGCGGGT+TGG 0.466645 3_2:-53790852 Msa0411530:CDS
TATCTGGTTTCAAATAGTTA+GGG 0.466786 3_2:-53786734 Msa0411530:three_prime_UTR
TCCACAGAGTTCGCATCAAA+GGG 0.468111 3_2:-53794377 Msa0411530:five_prime_UTR
GTGATTCTGGTGGTGTTAGT+GGG 0.469703 3_2:-53788979 Msa0411530:CDS
GTCCACAGAGTTCGCATCAA+AGG 0.471095 3_2:-53794378 Msa0411530:five_prime_UTR
GCATTAACTTCAGTGGTAGC+TGG 0.471887 3_2:+53788866 None:intergenic
CAGTTGTCCGTAGTAGAAAA+CGG 0.472398 3_2:-53788298 Msa0411530:CDS
AAACACACCTGCCAATTAGT+TGG 0.472687 3_2:+53787605 None:intergenic
CATCCTCAGGCAACAAAGAA+TGG 0.473668 3_2:+53789549 None:intergenic
AGAGGAATTGCTTGAAGAAG+AGG 0.477865 3_2:-53788043 Msa0411530:CDS
TTCAAACTGGGGAGACTTCG+TGG 0.479040 3_2:-53790761 Msa0411530:CDS
TGCTCAGAATAATGGACATC+AGG 0.480476 3_2:-53790991 Msa0411530:CDS
ACTACTCTCAATTGCAACTT+CGG 0.482876 3_2:+53787670 None:intergenic
GGCGCTAGCTCCGAGTATTA+TGG 0.482889 3_2:-53789320 Msa0411530:CDS
TTCCTCAGAAAATACTGTCT+TGG 0.482994 3_2:-53789639 Msa0411530:CDS
ATTGAGCATAAGAAAGGGAT+TGG 0.483279 3_2:+53789360 None:intergenic
GTTGGAAATGATACCAGTTC+AGG 0.483481 3_2:-53790834 Msa0411530:CDS
CTAGTGGAAGGCAGCTAAAG+AGG 0.483794 3_2:-53788061 Msa0411530:intron
ATGCTCTCATCTGCAATTCT+GGG 0.484407 3_2:-53790627 Msa0411530:CDS
TTATACATTTCCAGGAGAGT+TGG 0.487508 3_2:-53792218 Msa0411530:intron
ATGTACCCGACCAATGAGAT+AGG 0.490560 3_2:-53786830 Msa0411530:three_prime_UTR
GATTATATTGAGCATAAGAA+AGG 0.491133 3_2:+53789354 None:intergenic
TGATCATCGTCAGGCGGTGG+TGG 0.492606 3_2:+53789455 None:intergenic
CGCCGCCTCCTGATGATGAA+TGG 0.493691 3_2:-53789517 Msa0411530:CDS
TCCGGCATCACCGTGTATAG+TGG 0.493769 3_2:+53792189 None:intergenic
GCAAGTTGCAAGTGGATCAC+CGG 0.493850 3_2:+53789415 None:intergenic
CCGACGAGGGATCGAGCAAA+AGG 0.494065 3_2:-53791521 Msa0411530:CDS
CTGCAAACCAAAAGAAATGA+AGG 0.494491 3_2:-53786603 Msa0411530:three_prime_UTR
TTCTGAGCAACAGAATCTAC+AGG 0.494713 3_2:+53791005 None:intergenic
ATCGTGGATGGCAGCTGAGA+TGG 0.494738 3_2:+53788928 None:intergenic
GCTGCTAAAGCACAAACTAA+AGG 0.497288 3_2:-53788821 Msa0411530:intron
TTGACAGAAGCAGGAGGTAA+AGG 0.497502 3_2:+53790693 None:intergenic
TTGTGAATTGGTATCTCCTC+CGG 0.497548 3_2:+53792171 None:intergenic
CTGTCAGAGTGTACCCAGAA+TGG 0.498059 3_2:+53790088 None:intergenic
AGTTGTCCGTAGTAGAAAAC+GGG 0.498402 3_2:-53788297 Msa0411530:CDS
ACTGAAAGTGACGTTGCTCT+TGG 0.498492 3_2:-53790921 Msa0411530:CDS
CAACAATATCTGGCTTCTGT+TGG 0.498689 3_2:+53787645 None:intergenic
AACCAAGTTAGGGTCGGGTC+GGG 0.499353 3_2:+53794490 None:intergenic
GCAACCGAATGGTGTTGGCC+AGG 0.499425 3_2:-53789954 Msa0411530:CDS
TTGAGCCTCATAATAAGTAA+TGG 0.499805 3_2:+53789166 None:intergenic
TTCGGAAAATTTCGATGAGC+GGG 0.500330 3_2:-53790856 Msa0411530:CDS
TTCTTATCAAATCATCTCCA+TGG 0.503331 3_2:+53790472 None:intergenic
TTGGGATGAAGCCTCAAAGA+AGG 0.503853 3_2:-53786951 Msa0411530:CDS
AACACACCTGCCAATTAGTT+GGG 0.504759 3_2:+53787606 None:intergenic
TCCCCAAATTCTTCAGCGAC+AGG 0.504820 3_2:+53789977 None:intergenic
GCACTATAGTAGAGCTGTGC+AGG 0.508180 3_2:+53789242 None:intergenic
AAAGGGAAATCTGCAAGGTC+AGG 0.509740 3_2:-53790194 Msa0411530:CDS
TCCACTATACACGGTGATGC+CGG 0.510745 3_2:-53792190 Msa0411530:CDS
CCAATTCACAACAGCATGAT+GGG 0.511096 3_2:-53792159 Msa0411530:CDS
TGGAATAATCTACAGGTCAA+AGG 0.511372 3_2:-53790212 Msa0411530:intron
AAGGCATCATACTCACTCTC+AGG 0.511531 3_2:+53788015 None:intergenic
AATTGAAGCCACCATAAATC+CGG 0.511650 3_2:-53789741 Msa0411530:CDS
CAGTGCTCATCTCATCTCGT+TGG 0.513097 3_2:+53786884 None:intergenic
TTGAAAACCAAGTTAGGGTC+GGG 0.513401 3_2:+53794485 None:intergenic
TGGATCACCGGGTGGAAGAG+GGG 0.515704 3_2:+53789427 None:intergenic
GAGCTAGCGCCAAGATAAGA+TGG 0.516328 3_2:+53789332 None:intergenic
AAAGCGCCAAAGGGAAATAG+AGG 0.517482 3_2:-53787986 Msa0411530:intron
GGCAATATATATGTTTGGAA+TGG 0.519427 3_2:-53786809 Msa0411530:three_prime_UTR
AATAAGGGTTCTAATATCCA+TGG 0.520050 3_2:-53790489 Msa0411530:CDS
GGGGAGCAACCGAATGGTGT+TGG 0.520523 3_2:-53789959 Msa0411530:CDS
GGATCACCGGGTGGAAGAGG+GGG 0.521197 3_2:+53789428 None:intergenic
GAATCACTAATATTGATATC+CGG 0.521685 3_2:+53788995 None:intergenic
CAAGAGGGCAAAAGCAGCAA+AGG 0.523743 3_2:-53787708 Msa0411530:CDS
TTTGACTCTGCGACCAGCGT+TGG 0.525661 3_2:+53794280 None:intergenic
GAATGTACAAATGAAAATAA+GGG 0.525695 3_2:-53790504 Msa0411530:CDS
AATGGTTTCCAAAGATCAAA+CGG 0.525754 3_2:-53790883 Msa0411530:CDS
CATGAAAATGTGTGTAACAT+TGG 0.526507 3_2:-53789707 Msa0411530:CDS
ACCAATTCACAACAGCATGA+TGG 0.529542 3_2:-53792160 Msa0411530:CDS
TAGATCACAATGAAAACAAA+GGG 0.529797 3_2:-53789922 Msa0411530:CDS
AATGCAAAATTTAACCTCGA+TGG 0.530580 3_2:-53790964 Msa0411530:CDS
GGACGAAACTACCAAGGAAA+AGG 0.531884 3_2:+53794397 None:intergenic
GGGTCTCCCAACTAATTGGC+AGG 0.534281 3_2:-53787612 Msa0411530:intron
TATTGCCTATCTCATTGGTC+GGG 0.535894 3_2:+53786825 None:intergenic
ACTTATTATGAGGCTCAAGA+TGG 0.538358 3_2:-53789161 Msa0411530:intron
CGTGCTGCTCATTCCAACGC+TGG 0.539798 3_2:-53794293 Msa0411530:CDS
CCAATTAGTTGGGAGACCCT+TGG 0.540333 3_2:+53787616 None:intergenic
CTTGTCTGCATTAACTTCAG+TGG 0.542276 3_2:+53788859 None:intergenic
ATTTGATCATCGTCAGGCGG+TGG 0.543038 3_2:+53789452 None:intergenic
ACAGAACCCACCTGAAGAAG+AGG 0.544478 3_2:+53792123 None:intergenic
AATTCGAACACGGAATCCAA+TGG 0.544758 3_2:-53794336 Msa0411530:exon
TGTGATCTACTTCAGACTCC+TGG 0.545440 3_2:+53789936 None:intergenic
AGATATTGTTGAACTTGCCA+AGG 0.546556 3_2:-53787633 Msa0411530:CDS
ATATTGCCTATCTCATTGGT+CGG 0.547549 3_2:+53786824 None:intergenic
ATTATATTGAGCATAAGAAA+GGG 0.547952 3_2:+53789355 None:intergenic
CTAACAAACTCTCAGTCTGT+TGG 0.548357 3_2:+53790358 None:intergenic
ATATTGCCCAAGTAACAAAA+GGG 0.549246 3_2:+53791557 None:intergenic
CAAGTTGCAAGTGGATCACC+GGG 0.552571 3_2:+53789416 None:intergenic
TGGAATGTGCTGAGCATCAG+AGG 0.552739 3_2:+53789817 None:intergenic
GGCCTGTTTCTGTGTAAGAT+GGG 0.553318 3_2:+53789381 None:intergenic
CTTAGAAAGAAAGCGCCAAA+GGG 0.553737 3_2:-53787995 Msa0411530:CDS
GCTAACGGTGCACTTGATGA+AGG 0.556593 3_2:-53791038 Msa0411530:CDS
AGAAAACGGGCAGTTGCAGT+TGG 0.558428 3_2:-53788284 Msa0411530:CDS
CATTCCAGTAGTAATAATGT+TGG 0.560605 3_2:+53790784 None:intergenic
TATGTTTGGAATGGATAACA+TGG 0.560836 3_2:-53786800 Msa0411530:three_prime_UTR
CATTCTGGGTACACTCTGAC+AGG 0.562420 3_2:-53790087 Msa0411530:CDS
GAAAATTGAAAACCAAGTTA+GGG 0.564645 3_2:+53794480 None:intergenic
TGGAAGCAAAGATGATCCAT+AGG 0.565390 3_2:+53790108 None:intergenic
CTAATATTGATATCCGGTGT+GGG 0.567235 3_2:+53789001 None:intergenic
CCTTAGAAAGAAAGCGCCAA+AGG 0.569204 3_2:-53787996 Msa0411530:CDS
GGTTTCAAGTCTGGTGGACA+AGG 0.569623 3_2:-53788237 Msa0411530:intron
CGATAATGTTACAGTTGGTG+TGG 0.574315 3_2:-53790661 Msa0411530:CDS
ATCCATTCATCATCAGGAGG+CGG 0.577012 3_2:+53789515 None:intergenic
AGGCATATGCTCATTATCTG+GGG 0.578759 3_2:+53789481 None:intergenic
CTTCTTATTAGACTTCAATG+AGG 0.579237 3_2:+53788259 None:intergenic
TGATTCCTCCGGATTTATGG+TGG 0.580242 3_2:+53789733 None:intergenic
ATGTTTGGAATGGATAACAT+GGG 0.580334 3_2:-53786799 Msa0411530:three_prime_UTR
GATGATTTGATAAGAAATGA+TGG 0.581089 3_2:-53790465 Msa0411530:CDS
CTGAAACAGTTGCAGGATCG+TGG 0.583357 3_2:+53788912 None:intergenic
ACTAATATTGATATCCGGTG+TGG 0.583609 3_2:+53789000 None:intergenic
AACAGTTGCAGGATCGTGGA+TGG 0.583712 3_2:+53788916 None:intergenic
ACCTGTCGCTGAAGAATTTG+GGG 0.587929 3_2:-53789978 Msa0411530:CDS
TACCAGTTCAGGATGGAAGA+TGG 0.588183 3_2:-53790823 Msa0411530:CDS
AAACCAAGTTAGGGTCGGGT+CGG 0.589043 3_2:+53794489 None:intergenic
ACATGATAGCAAGTTGCAAG+TGG 0.589344 3_2:+53789407 None:intergenic
ATCAGAACATGATGAAGTAG+AGG 0.591191 3_2:-53790011 Msa0411530:CDS
CTCTAGCATATACTTTGACA+AGG 0.591287 3_2:+53790168 None:intergenic
ATACCATTCTTTGTTGCCTG+AGG 0.591391 3_2:-53789552 Msa0411530:CDS
GATCATGTGTCCCAAACGAA+TGG 0.591590 3_2:-53790537 Msa0411530:CDS
GGAGAAGGTCAGGCGCAAGA+GGG 0.591778 3_2:-53787723 Msa0411530:CDS
GTGGATTTGACTGAAATGGT+TGG 0.594407 3_2:+53789582 None:intergenic
CTTCGGAAAATTTCGATGAG+CGG 0.594535 3_2:-53790857 Msa0411530:CDS
ATTGAAAACCAAGTTAGGGT+CGG 0.596050 3_2:+53794484 None:intergenic
ACTACTGGAATGTTCAAACT+GGG 0.596383 3_2:-53790773 Msa0411530:CDS
GTAGATCACAATGAAAACAA+AGG 0.600972 3_2:-53789923 Msa0411530:CDS
TAAGAAGGTTTCAAGTCTGG+TGG 0.601784 3_2:-53788243 Msa0411530:CDS
CAAAAGGCCTAATGATACAA+AGG 0.604750 3_2:-53791505 Msa0411530:CDS
CATCAGAGACGACATGGACC+CGG 0.606161 3_2:-53786907 Msa0411530:CDS
TAATAAGTAATGGGATCAGT+CGG 0.608204 3_2:+53789176 None:intergenic
TGATGAAACTGTGGAAACCT+TGG 0.608943 3_2:-53790583 Msa0411530:CDS
GGCATTTGATCATCGTCAGG+CGG 0.609862 3_2:+53789449 None:intergenic
GTCTGTTGGACAAGACGAGA+AGG 0.614155 3_2:+53790372 None:intergenic
AAAACCGATAATGTTACAGT+TGG 0.614287 3_2:-53790666 Msa0411530:CDS
CGTGCGAAGCAAATTGCAAG+TGG 0.614902 3_2:-53787881 Msa0411530:CDS
TTGTCACATCAGAGACGACA+TGG 0.615542 3_2:-53786913 Msa0411530:CDS
CAGAACCCACCTGAAGAAGA+GGG 0.615956 3_2:+53792124 None:intergenic
AGCTGTCTGACCATAATACT+CGG 0.620669 3_2:+53789310 None:intergenic
TGATTCTGGTGGTGTTAGTG+GGG 0.623671 3_2:-53788978 Msa0411530:CDS
GGCATATGCTCATTATCTGG+GGG 0.623707 3_2:+53789482 None:intergenic
AATTGCAGATGAGAGCATGT+TGG 0.627569 3_2:+53790632 None:intergenic
ACATTTCCAGGAGAGTTGGG+TGG 0.630265 3_2:-53792214 Msa0411530:intron
AAAGGTGCATAGCCATGAAG+AGG 0.632488 3_2:-53791487 Msa0411530:intron
TGCTTTAGCAGCTAATGATG+AGG 0.632602 3_2:+53788832 None:intergenic
TGTTGATATGGATGTTGACA+TGG 0.635476 3_2:-53789678 Msa0411530:CDS
GTCGGATTGATCATAACTTG+AGG 0.635839 3_2:+53789194 None:intergenic
TTTAGCAGCTAATGATGAGG+TGG 0.637858 3_2:+53788835 None:intergenic
ATCTTTATGAGAAATCGCCA+AGG 0.637939 3_2:+53790566 None:intergenic
ATCAATATTAGTGATTCTGG+TGG 0.638529 3_2:-53788989 Msa0411530:CDS
GATATTGTTGAACTTGCCAA+GGG 0.638739 3_2:-53787632 Msa0411530:CDS
TCAAACTGGGGAGACTTCGT+GGG 0.639163 3_2:-53790760 Msa0411530:CDS
TGGATGGCAGCTGAGATGGA+CGG 0.640122 3_2:+53788932 None:intergenic
TAGTGATGATGAAGCCGACG+AGG 0.643526 3_2:-53791535 Msa0411530:CDS
GAATTTGGGGAGCAACCGAA+TGG 0.644443 3_2:-53789965 Msa0411530:CDS
GAAGCAAATTGCAAGTGGAG+AGG 0.645101 3_2:-53787876 Msa0411530:CDS
GCCCTTTGATGCGAACTCTG+TGG 0.648435 3_2:+53794376 None:intergenic
GAAATGATACCAGTTCAGGA+TGG 0.648834 3_2:-53790830 Msa0411530:CDS
CTCTGTGGACGAAACTACCA+AGG 0.650222 3_2:+53794391 None:intergenic
TATTTCTACTGGCAGTCATG+CGG 0.652448 3_2:-53789789 Msa0411530:CDS
AGGTCAAAGGGAAATCTGCA+AGG 0.654952 3_2:-53790199 Msa0411530:CDS
CTGCCAGTAGAAATAGACAA+TGG 0.658837 3_2:+53789797 None:intergenic
ACTATACACGGTGATGCCGG+AGG 0.663722 3_2:-53792187 Msa0411530:CDS
TATTGCCCAAGTAACAAAAG+GGG 0.667939 3_2:+53791558 None:intergenic
TGAAGCCACCATAAATCCGG+AGG 0.672209 3_2:-53789738 Msa0411530:CDS
ACTATATTCAACATCCATCG+AGG 0.675478 3_2:+53790950 None:intergenic
AGCTGGTTTGAAACCCACAC+CGG 0.678919 3_2:-53789014 Msa0411530:CDS
GGGATCCATTCATCATCAGG+AGG 0.680292 3_2:+53789512 None:intergenic
CAGAATAACAATGTTCACCC+CGG 0.681850 3_2:+53786639 None:intergenic
TTGTCATTGACAGAAGCAGG+AGG 0.682694 3_2:+53790687 None:intergenic
TTGGGTGGCTCCACTATACA+CGG 0.685154 3_2:-53792199 Msa0411530:CDS
TCATACCAATCACCACCCAA+AGG 0.688082 3_2:+53787830 None:intergenic
AGTGATGATGAAGCCGACGA+GGG 0.688649 3_2:-53791534 Msa0411530:CDS
TGAAAATGTGTGTAACATTG+GGG 0.697767 3_2:-53789705 Msa0411530:CDS
CCAAACGAATGGATGTAGCG+AGG 0.701965 3_2:-53790526 Msa0411530:CDS
TCTGAGCAACAGAATCTACA+GGG 0.704714 3_2:+53791006 None:intergenic
CTACTGGAATGTTCAAACTG+GGG 0.708253 3_2:-53790772 Msa0411530:CDS
TTTCACAGTTGATGAAACTG+TGG 0.710144 3_2:-53790592 Msa0411530:CDS
TCAGCTTGAGCCAAAACCTG+AGG 0.711341 3_2:+53790732 None:intergenic
TTCGAACACGGAATCCAATG+GGG 0.711491 3_2:-53794334 Msa0411530:exon
CAAGAACAAATAATGCACTG+TGG 0.712865 3_2:+53786699 None:intergenic
ATCGTGCAGAAATTCGAACA+CGG 0.718351 3_2:-53794346 Msa0411530:five_prime_UTR
GTTGCAAGTGGATCACCGGG+TGG 0.735849 3_2:+53789419 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTACATATTAAGTAATAAA+AGG + chr3_2:53793750-53793769 None:intergenic 10.0%
!! ATTACTTCTATCAAATAATA+TGG - chr3_2:53787307-53787326 Msa0411530:intron 15.0%
!!! ATTTTTTCTGTTTTTTACAT+GGG - chr3_2:53787815-53787834 Msa0411530:intron 15.0%
!! AAAAATCTATCTTTAATAGA+GGG - chr3_2:53788020-53788039 Msa0411530:CDS 15.0%
!!! AAAAAACAAATGTTTTCAAT+CGG + chr3_2:53788173-53788192 None:intergenic 15.0%
!!! ATTGAAAACATTTGTTTTTT+AGG - chr3_2:53788173-53788192 Msa0411530:intron 15.0%
!!! TTTTGAAGTATTTTAGAATT+TGG - chr3_2:53788208-53788227 Msa0411530:intron 15.0%
!! AAATAATTTATGCAATACTT+TGG - chr3_2:53788749-53788768 Msa0411530:intron 15.0%
!! TTCCACTAAATATTTAAATA+TGG + chr3_2:53790844-53790863 None:intergenic 15.0%
!!! AAACTAAAGGTAAATATTTT+GGG - chr3_2:53792263-53792282 Msa0411530:intron 15.0%
!!! TTTATTCTTTTTTTTTTTGG+TGG + chr3_2:53792440-53792459 None:intergenic 15.0%
!!! AATAATAATACTGATAATGA+AGG - chr3_2:53792458-53792477 Msa0411530:intron 15.0%
!!! TTTTTTAAAATTTCATATCC+TGG - chr3_2:53792910-53792929 Msa0411530:intron 15.0%
!!! AAAAGGAAATTCGATTTTTA+GGG + chr3_2:53786660-53786679 None:intergenic 20.0%
!!! TTCGTAATTGTTTCATTTTA+TGG - chr3_2:53786846-53786865 Msa0411530:three_prime_UTR 20.0%
!!! TATTTGTTTTTCGCTTTTTA+GGG + chr3_2:53787003-53787022 None:intergenic 20.0%
!! AAAAACAAATACATGATGAA+TGG - chr3_2:53787012-53787031 Msa0411530:intron 20.0%
!!! ATTTTTGTTGTATAAAGCAA+AGG - chr3_2:53787421-53787440 Msa0411530:intron 20.0%
!! ATAAGATACTAGAATGAATT+GGG + chr3_2:53787726-53787745 None:intergenic 20.0%
!! CATGTAAAAAACAGAAAAAA+TGG + chr3_2:53787816-53787835 None:intergenic 20.0%
!!! CATTTTTTCTGTTTTTTACA+TGG - chr3_2:53787814-53787833 Msa0411530:intron 20.0%
!! GAAAAATCTATCTTTAATAG+AGG - chr3_2:53788019-53788038 Msa0411530:CDS 20.0%
!!! GTTTGATTTTGATTGAATTA+AGG - chr3_2:53788237-53788256 Msa0411530:intron 20.0%
!! GATACATGAACAAAAAAATA+TGG + chr3_2:53788336-53788355 None:intergenic 20.0%
!! TGGATTATATATGTGATTTA+TGG - chr3_2:53788769-53788788 Msa0411530:intron 20.0%
!! AAAATATTCTTTCCTCTATA+TGG - chr3_2:53789425-53789444 Msa0411530:CDS 20.0%
!! AATATCATGAAATTACAGTA+GGG + chr3_2:53789806-53789825 None:intergenic 20.0%
!! CTTAATATTGTTTGTGTAAT+AGG - chr3_2:53789938-53789957 Msa0411530:CDS 20.0%
!! TCTTTATGTACTATTTATAC+CGG - chr3_2:53789992-53790011 Msa0411530:CDS 20.0%
!! GAATGTACAAATGAAAATAA+GGG - chr3_2:53790567-53790586 Msa0411530:CDS 20.0%
!! CTCCATATTTAAATATTTAG+TGG - chr3_2:53790839-53790858 Msa0411530:CDS 20.0%
!! ATTATATTGAGCATAAGAAA+GGG + chr3_2:53791719-53791738 None:intergenic 20.0%
!!! CAAACTAAAGGTAAATATTT+TGG - chr3_2:53792262-53792281 Msa0411530:intron 20.0%
!! GAAGAAAAATCACTATAAAA+AGG + chr3_2:53792867-53792886 None:intergenic 20.0%
!! TTTCTGTTTATTATTACTAG+TGG - chr3_2:53792994-53793013 Msa0411530:intron 20.0%
!!! ATATATTTCTTGTTTTATGC+AGG - chr3_2:53793323-53793342 Msa0411530:intron 20.0%
!!! TATGTTTTCTGTTTTAACAT+AGG - chr3_2:53793645-53793664 Msa0411530:intron 20.0%
!! ATGTAAAATCAAACAAATAG+AGG - chr3_2:53793763-53793782 Msa0411530:intron 20.0%
! GAAAATTGAAAACCAAGTTA+GGG + chr3_2:53786594-53786613 None:intergenic 25.0%
!! GAAAAGGAAATTCGATTTTT+AGG + chr3_2:53786661-53786680 None:intergenic 25.0%
! AAACAATTACGAATATTCAC+CGG + chr3_2:53786839-53786858 None:intergenic 25.0%
!!! GTATTTGTTTTTCGCTTTTT+AGG + chr3_2:53787004-53787023 None:intergenic 25.0%
! GAAGTAATTCTTCACATTAA+GGG + chr3_2:53787295-53787314 None:intergenic 25.0%
! AGAAGTAATTCTTCACATTA+AGG + chr3_2:53787296-53787315 None:intergenic 25.0%
! ACAAAATAAGATAAAGTCAC+TGG + chr3_2:53787338-53787357 None:intergenic 25.0%
! TGCAATTAAACTGAAAATCA+TGG + chr3_2:53787375-53787394 None:intergenic 25.0%
!! TTAATTGCATGTTTTCTGTT+TGG - chr3_2:53787386-53787405 Msa0411530:intron 25.0%
! CATAAGATACTAGAATGAAT+TGG + chr3_2:53787727-53787746 None:intergenic 25.0%
!!! ACAGAAAAAATGGATTTTTC+TGG + chr3_2:53787806-53787825 None:intergenic 25.0%
! ATAGTTCCAATTTAATTGGA+GGG + chr3_2:53787926-53787945 None:intergenic 25.0%
! AATAGTTCCAATTTAATTGG+AGG + chr3_2:53787927-53787946 None:intergenic 25.0%
! CTGAATAGTTCCAATTTAAT+TGG + chr3_2:53787930-53787949 None:intergenic 25.0%
! TAGTTAGGATTTATGAGTTA+TGG - chr3_2:53788132-53788151 Msa0411530:intron 25.0%
! CGATACATGATTCAAAAAAT+TGG - chr3_2:53788359-53788378 Msa0411530:intron 25.0%
!! TAGAAAGTACAAACATGATA+CGG + chr3_2:53788614-53788633 None:intergenic 25.0%
! GATCCATAAATCTGTTATAT+AGG - chr3_2:53788805-53788824 Msa0411530:intron 25.0%
! CAACCTATATAACAGATTTA+TGG + chr3_2:53788811-53788830 None:intergenic 25.0%
!! TCTCAATTTTATACATTTCC+AGG - chr3_2:53788845-53788864 Msa0411530:CDS 25.0%
! ACATTAAATTGGTGGAAATA+TGG - chr3_2:53789015-53789034 Msa0411530:CDS 25.0%
!!! ATGACAGATACTTAATTTGT+TGG - chr3_2:53789754-53789773 Msa0411530:CDS 25.0%
! GAATATCATGAAATTACAGT+AGG + chr3_2:53789807-53789826 None:intergenic 25.0%
! CTTTATGTACTATTTATACC+GGG - chr3_2:53789993-53790012 Msa0411530:CDS 25.0%
!!! TTTTATTTTTGTCAGGCTAA+CGG - chr3_2:53790018-53790037 Msa0411530:CDS 25.0%
!! TGGTAATTTGCAAAATGAAA+TGG - chr3_2:53790170-53790189 Msa0411530:CDS 25.0%
! GGAATGTACAAATGAAAATA+AGG - chr3_2:53790566-53790585 Msa0411530:CDS 25.0%
! GATGATTTGATAAGAAATGA+TGG - chr3_2:53790606-53790625 Msa0411530:CDS 25.0%
! TATTTAGTGGAATAATCTAC+AGG - chr3_2:53790852-53790871 Msa0411530:CDS 25.0%
!! AGATTAGACTTTCTGATTTT+AGG - chr3_2:53790930-53790949 Msa0411530:CDS 25.0%
! TAGATCACAATGAAAACAAA+GGG - chr3_2:53791149-53791168 Msa0411530:intron 25.0%
!! AATGTTACACACATTTTCAT+GGG + chr3_2:53791365-53791384 None:intergenic 25.0%
! ATGAAAATGTGTGTAACATT+GGG - chr3_2:53791365-53791384 Msa0411530:intron 25.0%
! AAAGAATGGTATTCAATTTG+TGG + chr3_2:53791511-53791530 None:intergenic 25.0%
! GATTATATTGAGCATAAGAA+AGG + chr3_2:53791720-53791739 None:intergenic 25.0%
! CAATATAATCCATCTTATCT+TGG - chr3_2:53791730-53791749 Msa0411530:intron 25.0%
! GAATCACTAATATTGATATC+CGG + chr3_2:53792079-53792098 None:intergenic 25.0%
! GATATCAATATTAGTGATTC+TGG - chr3_2:53792079-53792098 Msa0411530:intron 25.0%
!!! ATTCTTTTTTTTTTTGGTGG+TGG + chr3_2:53792437-53792456 None:intergenic 25.0%
!! TGAAGCGCATTTAAAATTTA+TGG + chr3_2:53792690-53792709 None:intergenic 25.0%
! TGTTTATTATTACTAGTGGA+AGG - chr3_2:53792998-53793017 Msa0411530:intron 25.0%
!! GTTTGCAAAATTTTACAACA+GGG + chr3_2:53793127-53793146 None:intergenic 25.0%
!! TGTTTGCAAAATTTTACAAC+AGG + chr3_2:53793128-53793147 None:intergenic 25.0%
! TTGAAAATTAGCATTGTCTT+TGG + chr3_2:53793221-53793240 None:intergenic 25.0%
!! AATGCTAATTTTCAACCTTT+GGG - chr3_2:53793226-53793245 Msa0411530:intron 25.0%
!! TTTAAGTTTAGTGTATCAGT+AGG + chr3_2:53793292-53793311 None:intergenic 25.0%
!!! TCCTTTTGTATTGCTTTATT+TGG - chr3_2:53793495-53793514 Msa0411530:intron 25.0%
! TCCAAATAAAGCAATACAAA+AGG + chr3_2:53793499-53793518 None:intergenic 25.0%
!!! TTGTATTGCTTTATTTGGAT+AGG - chr3_2:53793500-53793519 Msa0411530:intron 25.0%
!!! TGTATTGCTTTATTTGGATA+GGG - chr3_2:53793501-53793520 Msa0411530:intron 25.0%
! TTCACAATCTAATAAAGTAC+AGG + chr3_2:53793532-53793551 None:intergenic 25.0%
!! TGTTCATAAATCTTTTAACC+CGG + chr3_2:53793607-53793626 None:intergenic 25.0%
! AATGCAAAATTGCAAAATGA+TGG + chr3_2:53793712-53793731 None:intergenic 25.0%
!! AACAAATAGAGGTTAGTTAT+AGG - chr3_2:53793774-53793793 Msa0411530:intron 25.0%
! CATATCTTAATAGTGTGTAT+TGG + chr3_2:53793886-53793905 None:intergenic 25.0%
!! TTACTGTATTTTATGCAAGA+AGG - chr3_2:53793965-53793984 Msa0411530:intron 25.0%
!!! TCAATTTTTACTTGCTTTTC+AGG - chr3_2:53794093-53794112 Msa0411530:intron 25.0%
! ATATATATTGCCTATCTCAT+TGG + chr3_2:53794254-53794273 None:intergenic 25.0%
! AGATAGGCAATATATATGTT+TGG - chr3_2:53794257-53794276 Msa0411530:CDS 25.0%
! GAATATTTGCTTCTCTTATT+CGG - chr3_2:53794307-53794326 Msa0411530:CDS 25.0%
!! TATCTGGTTTCAAATAGTTA+GGG - chr3_2:53794337-53794356 Msa0411530:exon 25.0%
!! CATATTACCTTCATTTCTTT+TGG + chr3_2:53794478-53794497 None:intergenic 25.0%
CGAAAATTGAAAACCAAGTT+AGG + chr3_2:53786595-53786614 None:intergenic 30.0%
! AAATCGAATTTCCTTTTCCT+TGG - chr3_2:53786663-53786682 Msa0411530:three_prime_UTR 30.0%
CACAGATATGAACGAAATTA+GGG + chr3_2:53786891-53786910 None:intergenic 30.0%
TCACAGATATGAACGAAATT+AGG + chr3_2:53786892-53786911 None:intergenic 30.0%
! AGGTAAAATTGTTACTTGTC+AGG - chr3_2:53787060-53787079 Msa0411530:intron 30.0%
!!! TTGCTGTTTTCATATCGTAT+CGG + chr3_2:53787628-53787647 None:intergenic 30.0%
ATACGATATGAAAACAGCAA+TGG - chr3_2:53787628-53787647 Msa0411530:CDS 30.0%
!! GAAAAAATGGATTTTTCTGG+AGG + chr3_2:53787803-53787822 None:intergenic 30.0%
!!! TTTCTGTTTTTTACATGGGT+TGG - chr3_2:53787819-53787838 Msa0411530:intron 30.0%
TTGTAACCCTCCAATTAAAT+TGG - chr3_2:53787917-53787936 Msa0411530:intron 30.0%
! TTATTCAAGTTTCTTGGTGT+GGG + chr3_2:53787986-53788005 None:intergenic 30.0%
! TTTGCCTTATTCAAGTTTCT+TGG + chr3_2:53787992-53788011 None:intergenic 30.0%
CTTGAATAAGGCAAATAAGA+AGG - chr3_2:53787997-53788016 Msa0411530:CDS 30.0%
AGTGAAATTGAAGAGATAGT+TGG - chr3_2:53788052-53788071 Msa0411530:CDS 30.0%
! CTCTAAATATAGTCCTTTTG+AGG + chr3_2:53788981-53789000 None:intergenic 30.0%
CTCAAAAGGACTATATTTAG+AGG - chr3_2:53788979-53788998 Msa0411530:CDS 30.0%
ATGAGTGCTCAACATTAAAT+TGG - chr3_2:53789004-53789023 Msa0411530:CDS 30.0%
ATTCATATTTCAATGTGGCA+GGG + chr3_2:53789150-53789169 None:intergenic 30.0%
GAGTCATTCATATTTCAATG+TGG + chr3_2:53789155-53789174 None:intergenic 30.0%
! TTCTGTCTTTATTTGCTTTG+TGG - chr3_2:53789255-53789274 Msa0411530:CDS 30.0%
! TGACATTTTCTATCTGTAAC+AGG - chr3_2:53789283-53789302 Msa0411530:CDS 30.0%
CTTGTATAACATTATCGTTG+CGG - chr3_2:53789393-53789412 Msa0411530:CDS 30.0%
GCTAGATATTAACCATATAG+AGG + chr3_2:53789440-53789459 None:intergenic 30.0%
!! AAAATCCCCTTTTGTTACTT+GGG - chr3_2:53789508-53789527 Msa0411530:CDS 30.0%
ATATTGCCCAAGTAACAAAA+GGG + chr3_2:53789517-53789536 None:intergenic 30.0%
TATATTGCCCAAGTAACAAA+AGG + chr3_2:53789518-53789537 None:intergenic 30.0%
GTACAATTAATACCTCTTCA+TGG + chr3_2:53789599-53789618 None:intergenic 30.0%
! GTATGAAAACATCAAGCTTT+TGG + chr3_2:53789643-53789662 None:intergenic 30.0%
ACGAGAATATGATACATATC+TGG + chr3_2:53789665-53789684 None:intergenic 30.0%
ATTAAGCCTAATTATCACGA+GGG + chr3_2:53789924-53789943 None:intergenic 30.0%
TATTAAGCCTAATTATCACG+AGG + chr3_2:53789925-53789944 None:intergenic 30.0%
AATGCAAAATTTAACCTCGA+TGG - chr3_2:53790107-53790126 Msa0411530:CDS 30.0%
AATGGTTTCCAAAGATCAAA+CGG - chr3_2:53790188-53790207 Msa0411530:CDS 30.0%
AAAGCCAACATTATTACTAC+TGG - chr3_2:53790283-53790302 Msa0411530:intron 30.0%
CATTCCAGTAGTAATAATGT+TGG + chr3_2:53790290-53790309 None:intergenic 30.0%
AAAACCGATAATGTTACAGT+TGG - chr3_2:53790405-53790424 Msa0411530:CDS 30.0%
! AATAAGGGTTCTAATATCCA+TGG - chr3_2:53790582-53790601 Msa0411530:CDS 30.0%
TTCTTATCAAATCATCTCCA+TGG + chr3_2:53790602-53790621 None:intergenic 30.0%
CTCATGAGTTTATCTTATGT+TGG - chr3_2:53790630-53790649 Msa0411530:CDS 30.0%
TATGTTGGAGATCATTCAAT+AGG - chr3_2:53790645-53790664 Msa0411530:CDS 30.0%
TGTTCTGCATTATTTGTTTG+TGG - chr3_2:53790777-53790796 Msa0411530:CDS 30.0%
GTAGATCACAATGAAAACAA+AGG - chr3_2:53791148-53791167 Msa0411530:intron 30.0%
!! CTTACTTCTGAAGTTTCTAA+TGG - chr3_2:53791178-53791197 Msa0411530:intron 30.0%
!! ATTCCATTGTCTATTTCTAC+TGG - chr3_2:53791271-53791290 Msa0411530:intron 30.0%
! CAATGTTACACACATTTTCA+TGG + chr3_2:53791366-53791385 None:intergenic 30.0%
CATGAAAATGTGTGTAACAT+TGG - chr3_2:53791364-53791383 Msa0411530:intron 30.0%
TGAAAATGTGTGTAACATTG+GGG - chr3_2:53791366-53791385 Msa0411530:intron 30.0%
ATTTGTGGATTTGACTGAAA+TGG + chr3_2:53791496-53791515 None:intergenic 30.0%
GGACTTTCACTATATATGTT+AGG + chr3_2:53791859-53791878 None:intergenic 30.0%
! TAATAAGTAATGGGATCAGT+CGG + chr3_2:53791898-53791917 None:intergenic 30.0%
TGATCCCATTACTTATTATG+AGG - chr3_2:53791900-53791919 Msa0411530:intron 30.0%
TGAGCCTCATAATAAGTAAT+GGG + chr3_2:53791907-53791926 None:intergenic 30.0%
TTGAGCCTCATAATAAGTAA+TGG + chr3_2:53791908-53791927 None:intergenic 30.0%
! ATTGTCTTGTTGTATCTTAC+AGG - chr3_2:53792034-53792053 Msa0411530:intron 30.0%
ATCAATATTAGTGATTCTGG+TGG - chr3_2:53792082-53792101 Msa0411530:intron 30.0%
!! TAAAGGTAAATATTTTGGGC+TGG - chr3_2:53792267-53792286 Msa0411530:intron 30.0%
GATATTAGTGGCTAGATTAT+TGG - chr3_2:53792293-53792312 Msa0411530:intron 30.0%
!! ATCAGTCTTATTGGATATCT+AGG - chr3_2:53792327-53792346 Msa0411530:intron 30.0%
!! TCAGTCTTATTGGATATCTA+GGG - chr3_2:53792328-53792347 Msa0411530:intron 30.0%
GACAATGCATAAAATATGCA+AGG - chr3_2:53792392-53792411 Msa0411530:intron 30.0%
TTAATCCTAGATTGTTGTGA+TGG - chr3_2:53792491-53792510 Msa0411530:intron 30.0%
! ATCTGATAACGAATTTCTTG+CGG - chr3_2:53792586-53792605 Msa0411530:intron 30.0%
ATAAACTATGCTACAATGCA+CGG - chr3_2:53792724-53792743 Msa0411530:intron 30.0%
CTTCTTATTAGACTTCAATG+AGG + chr3_2:53792815-53792834 None:intergenic 30.0%
CTCATTGAAGTCTAATAAGA+AGG - chr3_2:53792813-53792832 Msa0411530:intron 30.0%
! TAATAAGAAGGTTTCAAGTC+TGG - chr3_2:53792825-53792844 Msa0411530:intron 30.0%
AACGTCAGAAACAAAACTTT+GGG + chr3_2:53793151-53793170 None:intergenic 30.0%
AAACGTCAGAAACAAAACTT+TGG + chr3_2:53793152-53793171 None:intergenic 30.0%
! CAATGCTAATTTTCAACCTT+TGG - chr3_2:53793225-53793244 Msa0411530:intron 30.0%
!!! TATTTCTTGTTTTATGCAGG+CGG - chr3_2:53793326-53793345 Msa0411530:intron 30.0%
!! CTTTTTAGCAAGCTTTTTGA+AGG - chr3_2:53793573-53793592 Msa0411530:intron 30.0%
!!! CTGTTTTAACATAGGTAACT+TGG - chr3_2:53793653-53793672 Msa0411530:intron 30.0%
AGAGGAACACTCAATAAAAA+AGG + chr3_2:53793687-53793706 None:intergenic 30.0%
!!! TTTTTTATTGAGTGTTCCTC+TGG - chr3_2:53793686-53793705 Msa0411530:intron 30.0%
TTGGTAAAAAATTCCCTCAA+GGG + chr3_2:53793867-53793886 None:intergenic 30.0%
ATTGGTAAAAAATTCCCTCA+AGG + chr3_2:53793868-53793887 None:intergenic 30.0%
ACATTAGGGGATAATGATAT+TGG - chr3_2:53794051-53794070 Msa0411530:intron 30.0%
ACCATAATAAACCTTCTTTG+AGG + chr3_2:53794134-53794153 None:intergenic 30.0%
GGCAATATATATGTTTGGAA+TGG - chr3_2:53794262-53794281 Msa0411530:CDS 30.0%
! TATGTTTGGAATGGATAACA+TGG - chr3_2:53794271-53794290 Msa0411530:CDS 30.0%
! ATGTTTGGAATGGATAACAT+GGG - chr3_2:53794272-53794291 Msa0411530:CDS 30.0%
! CTATCTGGTTTCAAATAGTT+AGG - chr3_2:53794336-53794355 Msa0411530:exon 30.0%
ATTGAAAACCAAGTTAGGGT+CGG + chr3_2:53786590-53786609 None:intergenic 35.0%
AATTACGAATATTCACCGGA+GGG + chr3_2:53786835-53786854 None:intergenic 35.0%
GCTTATTTGAGCTTATCTAC+TGG + chr3_2:53787259-53787278 None:intergenic 35.0%
CTAATGTTTGCAAGAGTTTC+TGG + chr3_2:53787487-53787506 None:intergenic 35.0%
!!! TGCTGTTTTCATATCGTATC+GGG + chr3_2:53787627-53787646 None:intergenic 35.0%
ATACAGACCCTGATACATAT+CGG + chr3_2:53787654-53787673 None:intergenic 35.0%
AGAATGAATTGGGATACGAT+CGG + chr3_2:53787716-53787735 None:intergenic 35.0%
!!! TTTTTTACATGGGTTGGTAC+TGG - chr3_2:53787825-53787844 Msa0411530:intron 35.0%
!!! TTTTTACATGGGTTGGTACT+GGG - chr3_2:53787826-53787845 Msa0411530:intron 35.0%
GTAAAGTACAAGAACATGTG+TGG + chr3_2:53787958-53787977 None:intergenic 35.0%
! CTTATTCAAGTTTCTTGGTG+TGG + chr3_2:53787987-53788006 None:intergenic 35.0%
CACACCAAGAAACTTGAATA+AGG - chr3_2:53787985-53788004 Msa0411530:intron 35.0%
ATTGAAGAGATAGTTGGAGA+TGG - chr3_2:53788058-53788077 Msa0411530:CDS 35.0%
GAATGAGATACATGAAGTTG+AGG - chr3_2:53788096-53788115 Msa0411530:intron 35.0%
GGATGAACTAGAAAGTAGTT+AGG - chr3_2:53788117-53788136 Msa0411530:intron 35.0%
ACAGATCATGGTAGTCAAAT+CGG + chr3_2:53788408-53788427 None:intergenic 35.0%
ATCTGCATTTGTACAGATCA+TGG + chr3_2:53788420-53788439 None:intergenic 35.0%
! ACATCCTTTAAAAGTTGGCA+CGG + chr3_2:53788487-53788506 None:intergenic 35.0%
! TCCACACATCCTTTAAAAGT+TGG + chr3_2:53788492-53788511 None:intergenic 35.0%
! AGTTTGAGCTTTTACATCTG+AGG - chr3_2:53788656-53788675 Msa0411530:intron 35.0%
TTATACATTTCCAGGAGAGT+TGG - chr3_2:53788853-53788872 Msa0411530:CDS 35.0%
TATACATTTCCAGGAGAGTT+GGG - chr3_2:53788854-53788873 Msa0411530:CDS 35.0%
! TTCTGTCAGTTTTCCTCAAA+AGG - chr3_2:53788965-53788984 Msa0411530:CDS 35.0%
AGTGCTCAACATTAAATTGG+TGG - chr3_2:53789007-53789026 Msa0411530:CDS 35.0%
CATTCATATTTCAATGTGGC+AGG + chr3_2:53789151-53789170 None:intergenic 35.0%
AAAAAGGAGGGAAAACGATT+GGG + chr3_2:53789177-53789196 None:intergenic 35.0%
! ACATAACAGCTTTTGTCTTC+AGG - chr3_2:53789474-53789493 Msa0411530:CDS 35.0%
! CAAAATCCCCTTTTGTTACT+TGG - chr3_2:53789507-53789526 Msa0411530:CDS 35.0%
TATTGCCCAAGTAACAAAAG+GGG + chr3_2:53789516-53789535 None:intergenic 35.0%
CAAAAGGCCTAATGATACAA+AGG - chr3_2:53789566-53789585 Msa0411530:CDS 35.0%
CTATGCACCTTTGTATCATT+AGG + chr3_2:53789576-53789595 None:intergenic 35.0%
! CTGTCATTTGTCTGACTTAA+TGG + chr3_2:53789741-53789760 None:intergenic 35.0%
! TGTGCAACTATACTTTTAGC+TGG + chr3_2:53789843-53789862 None:intergenic 35.0%
CCTGACAAAAATAAAACACC+CGG + chr3_2:53790014-53790033 None:intergenic 35.0%
GATTCTGTTGCTCAGAATAA+TGG - chr3_2:53790072-53790091 Msa0411530:CDS 35.0%
ACTATATTCAACATCCATCG+AGG + chr3_2:53790124-53790143 None:intergenic 35.0%
TACTACTGGAATGTTCAAAC+TGG - chr3_2:53790297-53790316 Msa0411530:intron 35.0%
ACTACTGGAATGTTCAAACT+GGG - chr3_2:53790298-53790317 Msa0411530:intron 35.0%
CACACCAACTGTAACATTAT+CGG + chr3_2:53790412-53790431 None:intergenic 35.0%
!! TTTCACAGTTGATGAAACTG+TGG - chr3_2:53790479-53790498 Msa0411530:CDS 35.0%
ATCTTTATGAGAAATCGCCA+AGG + chr3_2:53790508-53790527 None:intergenic 35.0%
TGGAATAATCTACAGGTCAA+AGG - chr3_2:53790859-53790878 Msa0411530:CDS 35.0%
GGAATAATCTACAGGTCAAA+GGG - chr3_2:53790860-53790879 Msa0411530:CDS 35.0%
CTCTAGCATATACTTTGACA+AGG + chr3_2:53790906-53790925 None:intergenic 35.0%
ATCATCTTTGCTTCCATTCT+GGG - chr3_2:53790970-53790989 Msa0411530:CDS 35.0%
ATCAGAACATGATGAAGTAG+AGG - chr3_2:53791060-53791079 Msa0411530:intron 35.0%
AATTGAAGCCACCATAAATC+CGG - chr3_2:53791330-53791349 Msa0411530:intron 35.0%
TGTTGATATGGATGTTGACA+TGG - chr3_2:53791393-53791412 Msa0411530:intron 35.0%
TTCCTCAGAAAATACTGTCT+TGG - chr3_2:53791432-53791451 Msa0411530:intron 35.0%
! ATCCAAGACAGTATTTTCTG+AGG + chr3_2:53791437-53791456 None:intergenic 35.0%
ATTGAGCATAAGAAAGGGAT+TGG + chr3_2:53791714-53791733 None:intergenic 35.0%
GTCCATATATGTTGCTAGTA+GGG + chr3_2:53791795-53791814 None:intergenic 35.0%
TGTCCATATATGTTGCTAGT+AGG + chr3_2:53791796-53791815 None:intergenic 35.0%
ACTTATTATGAGGCTCAAGA+TGG - chr3_2:53791910-53791929 Msa0411530:intron 35.0%
CTAATATTGATATCCGGTGT+GGG + chr3_2:53792073-53792092 None:intergenic 35.0%
ACTAATATTGATATCCGGTG+TGG + chr3_2:53792074-53792093 None:intergenic 35.0%
!! CAGTCTTATTGGATATCTAG+GGG - chr3_2:53792329-53792348 Msa0411530:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr3_2:53792397-53792416 Msa0411530:intron 35.0%
TTCATCCATCACAACAATCT+AGG + chr3_2:53792499-53792518 None:intergenic 35.0%
AGTAAAACCACTAATGTTGC+TGG + chr3_2:53792527-53792546 None:intergenic 35.0%
GCAAGAAATTCGTTATCAGA+TGG + chr3_2:53792587-53792606 None:intergenic 35.0%
TAAACTATGCTACAATGCAC+GGG - chr3_2:53792725-53792744 Msa0411530:intron 35.0%
TCTGACGTTTATTCCATTGT+AGG - chr3_2:53793162-53793181 Msa0411530:intron 35.0%
!!! ATTTCTTGTTTTATGCAGGC+GGG - chr3_2:53793327-53793346 Msa0411530:intron 35.0%
ACTACTCTCAATTGCAACTT+CGG + chr3_2:53793404-53793423 None:intergenic 35.0%
TTGGCAAGTTCAACAATATC+TGG + chr3_2:53793439-53793458 None:intergenic 35.0%
AGATATTGTTGAACTTGCCA+AGG - chr3_2:53793438-53793457 Msa0411530:intron 35.0%
GATATTGTTGAACTTGCCAA+GGG - chr3_2:53793439-53793458 Msa0411530:intron 35.0%
GGAACACTCAATAAAAAAGG+AGG + chr3_2:53793684-53793703 None:intergenic 35.0%
GTTAGTTATAGGATACAAGC+CGG - chr3_2:53793785-53793804 Msa0411530:intron 35.0%
AAAGATAAATACACCCCTTG+AGG - chr3_2:53793850-53793869 Msa0411530:intron 35.0%
AAGATAAATACACCCCTTGA+GGG - chr3_2:53793851-53793870 Msa0411530:intron 35.0%
TGGTAAAAAATTCCCTCAAG+GGG + chr3_2:53793866-53793885 None:intergenic 35.0%
CAAAAGTGAGTTTCAAGACT+GGG + chr3_2:53793939-53793958 None:intergenic 35.0%
TCAAAAGTGAGTTTCAAGAC+TGG + chr3_2:53793940-53793959 None:intergenic 35.0%
TATGCAAGAAGGTAGATATG+TGG - chr3_2:53793976-53793995 Msa0411530:intron 35.0%
TGTTGTGATCTGTGACATTA+GGG - chr3_2:53794037-53794056 Msa0411530:intron 35.0%
!! TACTTGCTTTTCAGGCTTAT+TGG - chr3_2:53794101-53794120 Msa0411530:intron 35.0%
!! ACTTGCTTTTCAGGCTTATT+GGG - chr3_2:53794102-53794121 Msa0411530:intron 35.0%
GCCTCAAAGAAGGTTTATTA+TGG - chr3_2:53794130-53794149 Msa0411530:intron 35.0%
ATATTGCCTATCTCATTGGT+CGG + chr3_2:53794250-53794269 None:intergenic 35.0%
CTTATTCGGAGTATACTATC+TGG - chr3_2:53794321-53794340 Msa0411530:exon 35.0%
CAAGAACAAATAATGCACTG+TGG + chr3_2:53794375-53794394 None:intergenic 35.0%
!!! GTGCATTTTTTTAGAAGCAC+CGG - chr3_2:53794413-53794432 Msa0411530:five_prime_UTR 35.0%
!!! TGCATTTTTTTAGAAGCACC+GGG - chr3_2:53794414-53794433 Msa0411530:five_prime_UTR 35.0%
CTGCAAACCAAAAGAAATGA+AGG - chr3_2:53794468-53794487 Msa0411530:five_prime_UTR 35.0%
TTGAAAACCAAGTTAGGGTC+GGG + chr3_2:53786589-53786608 None:intergenic 40.0%
ATCGTGCAGAAATTCGAACA+CGG - chr3_2:53786725-53786744 Msa0411530:three_prime_UTR 40.0%
AATTCGAACACGGAATCCAA+TGG - chr3_2:53786735-53786754 Msa0411530:three_prime_UTR 40.0%
ATTCGAACACGGAATCCAAT+GGG - chr3_2:53786736-53786755 Msa0411530:three_prime_UTR 40.0%
! AGTCAAACTCGATCTTTTCG+CGG - chr3_2:53786807-53786826 Msa0411530:three_prime_UTR 40.0%
CAATTACGAATATTCACCGG+AGG + chr3_2:53786836-53786855 None:intergenic 40.0%
!! CTTCACATTAAGGGCTAGTT+GGG + chr3_2:53787286-53787305 None:intergenic 40.0%
! TCTTCACATTAAGGGCTAGT+TGG + chr3_2:53787287-53787306 None:intergenic 40.0%
! CATTAGCTTCCTAGTTGTGT+TGG - chr3_2:53787501-53787520 Msa0411530:intron 40.0%
AGTGAATGTCCAACACAACT+AGG + chr3_2:53787513-53787532 None:intergenic 40.0%
TTGTGGGATACTTACTACAC+TGG + chr3_2:53787597-53787616 None:intergenic 40.0%
CGTATCGGGATACATATTGT+GGG + chr3_2:53787613-53787632 None:intergenic 40.0%
TCGTATCGGGATACATATTG+TGG + chr3_2:53787614-53787633 None:intergenic 40.0%
TGTGACACATCAGATATTCC+TGG - chr3_2:53787864-53787883 Msa0411530:CDS 40.0%
GTGACACATCAGATATTCCT+GGG - chr3_2:53787865-53787884 Msa0411530:CDS 40.0%
AGGGTTACAAAACAAAACCC+CGG + chr3_2:53787907-53787926 None:intergenic 40.0%
AGATCATGGTAGTCAAATCG+GGG + chr3_2:53788406-53788425 None:intergenic 40.0%
CAGATCATGGTAGTCAAATC+GGG + chr3_2:53788407-53788426 None:intergenic 40.0%
! TTACCCGTGCCAACTTTTAA+AGG - chr3_2:53788480-53788499 Msa0411530:intron 40.0%
! CATCCTTTAAAAGTTGGCAC+GGG + chr3_2:53788486-53788505 None:intergenic 40.0%
!! GCCAACTTTTAAAGGATGTG+TGG - chr3_2:53788488-53788507 Msa0411530:intron 40.0%
GTGATCTTGTATACCATGGA+TGG + chr3_2:53788588-53788607 None:intergenic 40.0%
GACAGTGATCTTGTATACCA+TGG + chr3_2:53788592-53788611 None:intergenic 40.0%
! CTTTTACATCTGAGGAGAGT+CGG - chr3_2:53788664-53788683 Msa0411530:intron 40.0%
! TTTTACATCTGAGGAGAGTC+GGG - chr3_2:53788665-53788684 Msa0411530:intron 40.0%
AAAGACATAAACTACCCCAG+TGG + chr3_2:53788709-53788728 None:intergenic 40.0%
TTGTGAATTGGTATCTCCTC+CGG + chr3_2:53788903-53788922 None:intergenic 40.0%
ACCAATTCACAACAGCATGA+TGG - chr3_2:53788911-53788930 Msa0411530:CDS 40.0%
CCAATTCACAACAGCATGAT+GGG - chr3_2:53788912-53788931 Msa0411530:CDS 40.0%
AGTCAGAGAACAGTTTCTTG+GGG + chr3_2:53789081-53789100 None:intergenic 40.0%
CAGTCAGAGAACAGTTTCTT+GGG + chr3_2:53789082-53789101 None:intergenic 40.0%
ACAGTCAGAGAACAGTTTCT+TGG + chr3_2:53789083-53789102 None:intergenic 40.0%
AGAAACTGTTCTCTGACTGT+AGG - chr3_2:53789083-53789102 Msa0411530:intron 40.0%
GAAACTGTTCTCTGACTGTA+GGG - chr3_2:53789084-53789103 Msa0411530:intron 40.0%
GGGAACATTCATTTCAGATG+AGG - chr3_2:53789120-53789139 Msa0411530:intron 40.0%
CAAAAAGGAGGGAAAACGAT+TGG + chr3_2:53789178-53789197 None:intergenic 40.0%
! CAATCGTTTTCCCTCCTTTT+TGG - chr3_2:53789176-53789195 Msa0411530:CDS 40.0%
!! CAGGCGGTAGAAAGTTTTAT+TGG - chr3_2:53789223-53789242 Msa0411530:CDS 40.0%
TCTCGTGTCTGTGTTTGTAT+TGG - chr3_2:53789679-53789698 Msa0411530:CDS 40.0%
CTCGTGTCTGTGTTTGTATT+GGG - chr3_2:53789680-53789699 Msa0411530:CDS 40.0%
!! GCAACTATACTTTTAGCTGG+TGG + chr3_2:53789840-53789859 None:intergenic 40.0%
!!! CCGGGTGTTTTATTTTTGTC+AGG - chr3_2:53790011-53790030 Msa0411530:CDS 40.0%
TCTGAGCAACAGAATCTACA+GGG + chr3_2:53790068-53790087 None:intergenic 40.0%
TTCTGAGCAACAGAATCTAC+AGG + chr3_2:53790069-53790088 None:intergenic 40.0%
!! TGCTCAGAATAATGGACATC+AGG - chr3_2:53790080-53790099 Msa0411530:CDS 40.0%
CAAAGATCAAACGGATGCTT+CGG - chr3_2:53790197-53790216 Msa0411530:CDS 40.0%
CTTCGGAAAATTTCGATGAG+CGG - chr3_2:53790214-53790233 Msa0411530:intron 40.0%
TTCGGAAAATTTCGATGAGC+GGG - chr3_2:53790215-53790234 Msa0411530:intron 40.0%
GTTGGAAATGATACCAGTTC+AGG - chr3_2:53790237-53790256 Msa0411530:intron 40.0%
GAAATGATACCAGTTCAGGA+TGG - chr3_2:53790241-53790260 Msa0411530:intron 40.0%
CTACTGGAATGTTCAAACTG+GGG - chr3_2:53790299-53790318 Msa0411530:intron 40.0%
! GTTTTGTCATTGACAGAAGC+AGG + chr3_2:53790390-53790409 None:intergenic 40.0%
! CGATAATGTTACAGTTGGTG+TGG - chr3_2:53790410-53790429 Msa0411530:CDS 40.0%
! AATTGCAGATGAGAGCATGT+TGG + chr3_2:53790442-53790461 None:intergenic 40.0%
ATGCTCTCATCTGCAATTCT+GGG - chr3_2:53790444-53790463 Msa0411530:CDS 40.0%
TGATGAAACTGTGGAAACCT+TGG - chr3_2:53790488-53790507 Msa0411530:CDS 40.0%
CTAACAAACTCTCAGTCTGT+TGG + chr3_2:53790716-53790735 None:intergenic 40.0%
! TTTAGGTCGCTTTCATCCTA+TGG - chr3_2:53790947-53790966 Msa0411530:CDS 40.0%
TGGAAGCAAAGATGATCCAT+AGG + chr3_2:53790966-53790985 None:intergenic 40.0%
GATCATCTTTGCTTCCATTC+TGG - chr3_2:53790969-53790988 Msa0411530:CDS 40.0%
TACCTGTCGCTGAAGAATTT+GGG - chr3_2:53791092-53791111 Msa0411530:intron 40.0%
! CGCTTCAGTTGAAGCTTTAA+AGG - chr3_2:53791213-53791232 Msa0411530:intron 40.0%
CTGCCAGTAGAAATAGACAA+TGG + chr3_2:53791277-53791296 None:intergenic 40.0%
! TATTTCTACTGGCAGTCATG+CGG - chr3_2:53791282-53791301 Msa0411530:intron 40.0%
!!! TTTTCATGGGTTGATTCCTC+CGG + chr3_2:53791352-53791371 None:intergenic 40.0%
CATTGGGGAAGATGTTGATA+TGG - chr3_2:53791381-53791400 Msa0411530:intron 40.0%
GTGGATTTGACTGAAATGGT+TGG + chr3_2:53791492-53791511 None:intergenic 40.0%
ATACCATTCTTTGTTGCCTG+AGG - chr3_2:53791519-53791538 Msa0411530:CDS 40.0%
AGGCATATGCTCATTATCTG+GGG + chr3_2:53791593-53791612 None:intergenic 40.0%
GAGGCATATGCTCATTATCT+GGG + chr3_2:53791594-53791613 None:intergenic 40.0%
ACATGATAGCAAGTTGCAAG+TGG + chr3_2:53791667-53791686 None:intergenic 40.0%
ATCCCATCTTACACAGAAAC+AGG - chr3_2:53791688-53791707 Msa0411530:intron 40.0%
AGCTGTCTGACCATAATACT+CGG + chr3_2:53791764-53791783 None:intergenic 40.0%
GTCCCTACTAGCAACATATA+TGG - chr3_2:53791790-53791809 Msa0411530:intron 40.0%
GTCGGATTGATCATAACTTG+AGG + chr3_2:53791880-53791899 None:intergenic 40.0%
TTGTTGTATCTTACAGGAGC+TGG - chr3_2:53792040-53792059 Msa0411530:intron 40.0%
! AGTTGATGCGAGTGTTTCAT+TGG - chr3_2:53792180-53792199 Msa0411530:CDS 40.0%
CTTGTCTGCATTAACTTCAG+TGG + chr3_2:53792215-53792234 None:intergenic 40.0%
TTTAGCAGCTAATGATGAGG+TGG + chr3_2:53792239-53792258 None:intergenic 40.0%
TGCTTTAGCAGCTAATGATG+AGG + chr3_2:53792242-53792261 None:intergenic 40.0%
GCTGCTAAAGCACAAACTAA+AGG - chr3_2:53792250-53792269 Msa0411530:intron 40.0%
!! TTGGGCTGGTTTGATATTAG+TGG - chr3_2:53792281-53792300 Msa0411530:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+TGG - chr3_2:53792370-53792389 Msa0411530:intron 40.0%
AATGAGTCCAGCAACATTAG+TGG - chr3_2:53792517-53792536 Msa0411530:intron 40.0%
ACAACTGAGGAAAAAGGTGA+TGG + chr3_2:53792760-53792779 None:intergenic 40.0%
! TTTTCTACTACGGACAACTG+AGG + chr3_2:53792773-53792792 None:intergenic 40.0%
CAGTTGTCCGTAGTAGAAAA+CGG - chr3_2:53792773-53792792 Msa0411530:intron 40.0%
AGTTGTCCGTAGTAGAAAAC+GGG - chr3_2:53792774-53792793 Msa0411530:intron 40.0%
! TAAGAAGGTTTCAAGTCTGG+TGG - chr3_2:53792828-53792847 Msa0411530:intron 40.0%
AGAGGAATTGCTTGAAGAAG+AGG - chr3_2:53793028-53793047 Msa0411530:intron 40.0%
!! CTTAGAAAGAAAGCGCCAAA+GGG - chr3_2:53793076-53793095 Msa0411530:intron 40.0%
TGCAAACCTCTATTTCCCTT+TGG + chr3_2:53793094-53793113 None:intergenic 40.0%
CGTTTATTCCATTGTAGGAG+TGG - chr3_2:53793167-53793186 Msa0411530:intron 40.0%
! GCTAATTTTCAACCTTTGGG+TGG - chr3_2:53793229-53793248 Msa0411530:intron 40.0%
GGTGTTAAGTTAACAGTCTC+TGG + chr3_2:53793271-53793290 None:intergenic 40.0%
! CAACAATATCTGGCTTCTGT+TGG + chr3_2:53793429-53793448 None:intergenic 40.0%
AACACACCTGCCAATTAGTT+GGG + chr3_2:53793468-53793487 None:intergenic 40.0%
AAACACACCTGCCAATTAGT+TGG + chr3_2:53793469-53793488 None:intergenic 40.0%
AATTGGCAGGTGTGTTTCAT+TGG - chr3_2:53793472-53793491 Msa0411530:intron 40.0%
!! AGCTTGCTAAAAAGTGACGA+CGG + chr3_2:53793567-53793586 None:intergenic 40.0%
!! TAGCAAGCTTTTTGAAGGTG+AGG - chr3_2:53793578-53793597 Msa0411530:intron 40.0%
AATTGCAAAATGATGGCCAG+AGG + chr3_2:53793705-53793724 None:intergenic 40.0%
GTGACAGCTATGTAGATAAC+AGG + chr3_2:53793914-53793933 None:intergenic 40.0%
AAGAAGGTAGATATGTGGCT+AGG - chr3_2:53793981-53794000 Msa0411530:intron 40.0%
GTGTTGTGATCTGTGACATT+AGG - chr3_2:53794036-53794055 Msa0411530:intron 40.0%
GTTGTGATCTGTGACATTAG+GGG - chr3_2:53794038-53794057 Msa0411530:intron 40.0%
TATTGCCTATCTCATTGGTC+GGG + chr3_2:53794249-53794268 None:intergenic 40.0%
!!! GCATTTTTTTAGAAGCACCG+GGG - chr3_2:53794415-53794434 Msa0411530:five_prime_UTR 40.0%
CAGAATAACAATGTTCACCC+CGG + chr3_2:53794435-53794454 None:intergenic 40.0%
GGACGAAACTACCAAGGAAA+AGG + chr3_2:53786677-53786696 None:intergenic 45.0%
TCCACAGAGTTCGCATCAAA+GGG - chr3_2:53786694-53786713 Msa0411530:three_prime_UTR 45.0%
TTCGAACACGGAATCCAATG+GGG - chr3_2:53786737-53786756 Msa0411530:three_prime_UTR 45.0%
! GAATGGTTGAGTTGCACTTC+AGG - chr3_2:53787029-53787048 Msa0411530:intron 45.0%
TTGCACTTCAGGTGACTAGT+AGG - chr3_2:53787040-53787059 Msa0411530:intron 45.0%
!! CACCTAAGCGATAACTTGCT+TGG - chr3_2:53787164-53787183 Msa0411530:intron 45.0%
CTCCAAGCAAGTTATCGCTT+AGG + chr3_2:53787169-53787188 None:intergenic 45.0%
!! CATTAAGGGCTAGTTGGGAT+TGG + chr3_2:53787281-53787300 None:intergenic 45.0%
AGCAATGGCCGATATGTATC+AGG - chr3_2:53787643-53787662 Msa0411530:CDS 45.0%
GCAATGGCCGATATGTATCA+GGG - chr3_2:53787644-53787663 Msa0411530:CDS 45.0%
ATCAGGGTCTGTATCCCAAA+TGG - chr3_2:53787660-53787679 Msa0411530:CDS 45.0%
TCCCAAATGGTCATGTATCG+CGG - chr3_2:53787673-53787692 Msa0411530:CDS 45.0%
GGATACGATCGGTGATACAT+GGG + chr3_2:53787705-53787724 None:intergenic 45.0%
AAGTGAAACGCGACTTTCAC+AGG + chr3_2:53787753-53787772 None:intergenic 45.0%
GAATACAAAGTGGTTCACCC+AGG + chr3_2:53787885-53787904 None:intergenic 45.0%
GGGTGAACCACTTTGTATTC+CGG - chr3_2:53787885-53787904 Msa0411530:CDS 45.0%
GGTGAACCACTTTGTATTCC+GGG - chr3_2:53787886-53787905 Msa0411530:CDS 45.0%
GTGAACCACTTTGTATTCCG+GGG - chr3_2:53787887-53787906 Msa0411530:CDS 45.0%
CAAAACCCCGGAATACAAAG+TGG + chr3_2:53787895-53787914 None:intergenic 45.0%
AGTTGGAGATGGAGATGAAG+TGG - chr3_2:53788069-53788088 Msa0411530:intron 45.0%
GTATACCATGGATGGACAGA+GGG + chr3_2:53788580-53788599 None:intergenic 45.0%
TGTATACCATGGATGGACAG+AGG + chr3_2:53788581-53788600 None:intergenic 45.0%
CCCATCATGCTGTTGTGAAT+TGG + chr3_2:53788915-53788934 None:intergenic 45.0%
CCTGAAGAAGAGGGTGAATT+GGG + chr3_2:53788941-53788960 None:intergenic 45.0%
ACCTGAAGAAGAGGGTGAAT+TGG + chr3_2:53788942-53788961 None:intergenic 45.0%
AATTCACCCTCTTCTTCAGG+TGG - chr3_2:53788941-53788960 Msa0411530:CDS 45.0%
ATTCACCCTCTTCTTCAGGT+GGG - chr3_2:53788942-53788961 Msa0411530:CDS 45.0%
CTTGAAGCTGCCAAAAAGGA+GGG + chr3_2:53789189-53789208 None:intergenic 45.0%
!! CTCCTTTTTGGCAGCTTCAA+GGG - chr3_2:53789188-53789207 Msa0411530:CDS 45.0%
ATCCCTTGAAGCTGCCAAAA+AGG + chr3_2:53789193-53789212 None:intergenic 45.0%
! AAAGGTGCATAGCCATGAAG+AGG - chr3_2:53789584-53789603 Msa0411530:CDS 45.0%
ACTGAAAGTGACGTTGCTCT+TGG - chr3_2:53790150-53790169 Msa0411530:CDS 45.0%
! CGAAGCATCCGTTTGATCTT+TGG + chr3_2:53790199-53790218 None:intergenic 45.0%
GAAAATTTCGATGAGCGGGT+TGG - chr3_2:53790219-53790238 Msa0411530:intron 45.0%
TACCAGTTCAGGATGGAAGA+TGG - chr3_2:53790248-53790267 Msa0411530:intron 45.0%
TTGACAGAAGCAGGAGGTAA+AGG + chr3_2:53790381-53790400 None:intergenic 45.0%
TTGTCATTGACAGAAGCAGG+AGG + chr3_2:53790387-53790406 None:intergenic 45.0%
CATGCTCTCATCTGCAATTC+TGG - chr3_2:53790443-53790462 Msa0411530:CDS 45.0%
GATCATGTGTCCCAAACGAA+TGG - chr3_2:53790534-53790553 Msa0411530:CDS 45.0%
CTCGCTACATCCATTCGTTT+GGG + chr3_2:53790547-53790566 None:intergenic 45.0%
AGGTCAAAGGGAAATCTGCA+AGG - chr3_2:53790872-53790891 Msa0411530:CDS 45.0%
AAAGGGAAATCTGCAAGGTC+AGG - chr3_2:53790877-53790896 Msa0411530:CDS 45.0%
GTACCTGTCGCTGAAGAATT+TGG - chr3_2:53791091-53791110 Msa0411530:intron 45.0%
ACCTGTCGCTGAAGAATTTG+GGG - chr3_2:53791093-53791112 Msa0411530:intron 45.0%
TGTGATCTACTTCAGACTCC+TGG + chr3_2:53791138-53791157 None:intergenic 45.0%
TGATTCCTCCGGATTTATGG+TGG + chr3_2:53791341-53791360 None:intergenic 45.0%
! GGTTGATTCCTCCGGATTTA+TGG + chr3_2:53791344-53791363 None:intergenic 45.0%
CATCCTCAGGCAACAAAGAA+TGG + chr3_2:53791525-53791544 None:intergenic 45.0%
ATCCATTCATCATCAGGAGG+CGG + chr3_2:53791559-53791578 None:intergenic 45.0%
ATATGCTCATTATCTGGGGG+TGG + chr3_2:53791589-53791608 None:intergenic 45.0%
GGCATATGCTCATTATCTGG+GGG + chr3_2:53791592-53791611 None:intergenic 45.0%
! GGAGGCATATGCTCATTATC+TGG + chr3_2:53791595-53791614 None:intergenic 45.0%
!! GGCCTGTTTCTGTGTAAGAT+GGG + chr3_2:53791693-53791712 None:intergenic 45.0%
!! TGGCCTGTTTCTGTGTAAGA+TGG + chr3_2:53791694-53791713 None:intergenic 45.0%
! AGTGATTCTGGTGGTGTTAG+TGG - chr3_2:53792091-53792110 Msa0411530:intron 45.0%
! GTGATTCTGGTGGTGTTAGT+GGG - chr3_2:53792092-53792111 Msa0411530:intron 45.0%
! TGATTCTGGTGGTGTTAGTG+GGG - chr3_2:53792093-53792112 Msa0411530:intron 45.0%
GCATCAACTGAAACAGTTGC+AGG + chr3_2:53792169-53792188 None:intergenic 45.0%
GCATTAACTTCAGTGGTAGC+TGG + chr3_2:53792208-53792227 None:intergenic 45.0%
! GCGCGATCTATCAGTCTTAT+TGG - chr3_2:53792318-53792337 Msa0411530:intron 45.0%
CCAACTGAGTTAAGCTCACA+GGG + chr3_2:53792368-53792387 None:intergenic 45.0%
ACCAACTGAGTTAAGCTCAC+AGG + chr3_2:53792369-53792388 None:intergenic 45.0%
!!! TTTTTTTTTGGTGGTGGCCG+AGG + chr3_2:53792431-53792450 None:intergenic 45.0%
CTACGGACAACTGAGGAAAA+AGG + chr3_2:53792766-53792785 None:intergenic 45.0%
! CAACTGCCCGTTTTCTACTA+CGG + chr3_2:53792783-53792802 None:intergenic 45.0%
TCCTGGATTGTGCTCTTGTT+TGG - chr3_2:53792927-53792946 Msa0411530:intron 45.0%
! ACCAAACAAGAGCACAATCC+AGG + chr3_2:53792931-53792950 None:intergenic 45.0%
! AAGGCATCATACTCACTCTC+AGG + chr3_2:53793059-53793078 None:intergenic 45.0%
CCTTTGGCGCTTTCTTTCTA+AGG + chr3_2:53793078-53793097 None:intergenic 45.0%
!! CCTTAGAAAGAAAGCGCCAA+AGG - chr3_2:53793075-53793094 Msa0411530:intron 45.0%
! AAAGCGCCAAAGGGAAATAG+AGG - chr3_2:53793085-53793104 Msa0411530:intron 45.0%
GGGAAATAGAGGTTTGCATG+AGG - chr3_2:53793096-53793115 Msa0411530:intron 45.0%
GAAGCAAATTGCAAGTGGAG+AGG - chr3_2:53793195-53793214 Msa0411530:intron 45.0%
TTCAACCTTTGGGTGGTGAT+TGG - chr3_2:53793236-53793255 Msa0411530:intron 45.0%
TCATACCAATCACCACCCAA+AGG + chr3_2:53793244-53793263 None:intergenic 45.0%
!! CTTTTTGAAGGTGAGGAAGC+CGG - chr3_2:53793585-53793604 Msa0411530:intron 45.0%
!! TTTTTGAAGGTGAGGAAGCC+GGG - chr3_2:53793586-53793605 Msa0411530:intron 45.0%
AGTTATAGGATACAAGCCGG+CGG - chr3_2:53793788-53793807 Msa0411530:intron 45.0%
AAGTGAGTTTCAAGACTGGG+TGG + chr3_2:53793936-53793955 None:intergenic 45.0%
TTGGGATGAAGCCTCAAAGA+AGG - chr3_2:53794120-53794139 Msa0411530:intron 45.0%
TTGTCACATCAGAGACGACA+TGG - chr3_2:53794158-53794177 Msa0411530:intron 45.0%
ATGTACCCGACCAATGAGAT+AGG - chr3_2:53794241-53794260 Msa0411530:intron 45.0%
! CGGGGTGAACATTGTTATTC+TGG - chr3_2:53794433-53794452 Msa0411530:five_prime_UTR 45.0%
!! TTAATTTATATATAGTATTA+TGG - chr3_2:53788527-53788546 Msa0411530:intron 5.0%
!!! TTATTTATTCTTTTTTTTTT+TGG + chr3_2:53792443-53792462 None:intergenic 5.0%
CTCTGTGGACGAAACTACCA+AGG + chr3_2:53786683-53786702 None:intergenic 50.0%
GTCCACAGAGTTCGCATCAA+AGG - chr3_2:53786693-53786712 Msa0411530:three_prime_UTR 50.0%
CCCGCGATACATGACCATTT+GGG + chr3_2:53787677-53787696 None:intergenic 50.0%
CCCAAATGGTCATGTATCGC+GGG - chr3_2:53787674-53787693 Msa0411530:CDS 50.0%
GGGATACGATCGGTGATACA+TGG + chr3_2:53787706-53787725 None:intergenic 50.0%
TCTATCCCTCTGTCCATCCA+TGG - chr3_2:53788572-53788591 Msa0411530:intron 50.0%
CGTCATGTCTGCATTCCACT+GGG - chr3_2:53788691-53788710 Msa0411530:intron 50.0%
GTCATGTCTGCATTCCACTG+GGG - chr3_2:53788692-53788711 Msa0411530:intron 50.0%
ACATTTCCAGGAGAGTTGGG+TGG - chr3_2:53788857-53788876 Msa0411530:CDS 50.0%
TTGGGTGGCTCCACTATACA+CGG - chr3_2:53788872-53788891 Msa0411530:CDS 50.0%
TCCACTATACACGGTGATGC+CGG - chr3_2:53788881-53788900 Msa0411530:CDS 50.0%
CCCAATTCACCCTCTTCTTC+AGG - chr3_2:53788938-53788957 Msa0411530:CDS 50.0%
CAGAACCCACCTGAAGAAGA+GGG + chr3_2:53788950-53788969 None:intergenic 50.0%
ACAGAACCCACCTGAAGAAG+AGG + chr3_2:53788951-53788970 None:intergenic 50.0%
CCTTGAAGCTGCCAAAAAGG+AGG + chr3_2:53789190-53789209 None:intergenic 50.0%
!! CCTCCTTTTTGGCAGCTTCA+AGG - chr3_2:53789187-53789206 Msa0411530:CDS 50.0%
TCAAGGGATTTCCGAGGTTC+AGG - chr3_2:53789204-53789223 Msa0411530:CDS 50.0%
ACTTTCTACCGCCTGAACCT+CGG + chr3_2:53789218-53789237 None:intergenic 50.0%
! TAGTGATGATGAAGCCGACG+AGG - chr3_2:53789536-53789555 Msa0411530:CDS 50.0%
! AGTGATGATGAAGCCGACGA+GGG - chr3_2:53789537-53789556 Msa0411530:CDS 50.0%
CTAATTATCACGAGGGACGC+AGG + chr3_2:53789917-53789936 None:intergenic 50.0%
CTGCGTCCCTCGTGATAATT+AGG - chr3_2:53789915-53789934 Msa0411530:CDS 50.0%
GCTAACGGTGCACTTGATGA+AGG - chr3_2:53790033-53790052 Msa0411530:CDS 50.0%
CACCATCTTCCATCCTGAAC+TGG + chr3_2:53790253-53790272 None:intergenic 50.0%
TTCAAACTGGGGAGACTTCG+TGG - chr3_2:53790310-53790329 Msa0411530:intron 50.0%
TCAAACTGGGGAGACTTCGT+GGG - chr3_2:53790311-53790330 Msa0411530:intron 50.0%
TCAGCTTGAGCCAAAACCTG+AGG + chr3_2:53790342-53790361 None:intergenic 50.0%
CCTCGCTACATCCATTCGTT+TGG + chr3_2:53790548-53790567 None:intergenic 50.0%
CCAAACGAATGGATGTAGCG+AGG - chr3_2:53790545-53790564 Msa0411530:CDS 50.0%
GTCTGTTGGACAAGACGAGA+AGG + chr3_2:53790702-53790721 None:intergenic 50.0%
CTGTCAGAGTGTACCCAGAA+TGG + chr3_2:53790986-53791005 None:intergenic 50.0%
CATTCTGGGTACACTCTGAC+AGG - chr3_2:53790984-53791003 Msa0411530:CDS 50.0%
TCCCCAAATTCTTCAGCGAC+AGG + chr3_2:53791097-53791116 None:intergenic 50.0%
GAATTTGGGGAGCAACCGAA+TGG - chr3_2:53791106-53791125 Msa0411530:intron 50.0%
TGGAATGTGCTGAGCATCAG+AGG + chr3_2:53791257-53791276 None:intergenic 50.0%
TGAAGCCACCATAAATCCGG+AGG - chr3_2:53791333-53791352 Msa0411530:intron 50.0%
GGGATCCATTCATCATCAGG+AGG + chr3_2:53791562-53791581 None:intergenic 50.0%
ATTTGATCATCGTCAGGCGG+TGG + chr3_2:53791622-53791641 None:intergenic 50.0%
GGCATTTGATCATCGTCAGG+CGG + chr3_2:53791625-53791644 None:intergenic 50.0%
CAAGTTGCAAGTGGATCACC+GGG + chr3_2:53791658-53791677 None:intergenic 50.0%
GCAAGTTGCAAGTGGATCAC+CGG + chr3_2:53791659-53791678 None:intergenic 50.0%
GAGCTAGCGCCAAGATAAGA+TGG + chr3_2:53791742-53791761 None:intergenic 50.0%
GCACTATAGTAGAGCTGTGC+AGG + chr3_2:53791832-53791851 None:intergenic 50.0%
!! AGCTGGTTTGAAACCCACAC+CGG - chr3_2:53792057-53792076 Msa0411530:intron 50.0%
! TGGTGTTAGTGGGGCTGATA+GGG - chr3_2:53792102-53792121 Msa0411530:intron 50.0%
AACAGTTGCAGGATCGTGGA+TGG + chr3_2:53792158-53792177 None:intergenic 50.0%
CTGAAACAGTTGCAGGATCG+TGG + chr3_2:53792162-53792181 None:intergenic 50.0%
CCCTGTGAGCTTAACTCAGT+TGG - chr3_2:53792365-53792384 Msa0411530:intron 50.0%
AGAAAACGGGCAGTTGCAGT+TGG - chr3_2:53792787-53792806 Msa0411530:intron 50.0%
! GGTTTCAAGTCTGGTGGACA+AGG - chr3_2:53792834-53792853 Msa0411530:intron 50.0%
! TCAAGTCTGGTGGACAAGGT+AGG - chr3_2:53792838-53792857 Msa0411530:intron 50.0%
CTAGTGGAAGGCAGCTAAAG+AGG - chr3_2:53793010-53793029 Msa0411530:intron 50.0%
CGTGCGAAGCAAATTGCAAG+TGG - chr3_2:53793190-53793209 Msa0411530:intron 50.0%
! TGTTTTATGCAGGCGGGAGA+AGG - chr3_2:53793333-53793352 Msa0411530:intron 50.0%
CAAGAGGGCAAAAGCAGCAA+AGG - chr3_2:53793363-53793382 Msa0411530:intron 50.0%
CCAATTAGTTGGGAGACCCT+TGG + chr3_2:53793458-53793477 None:intergenic 50.0%
CCAAGGGTCTCCCAACTAAT+TGG - chr3_2:53793455-53793474 Msa0411530:intron 50.0%
ATACAAGCCGGCGGATGAAT+TGG - chr3_2:53793797-53793816 Msa0411530:intron 50.0%
CACTCTTCCAATTCATCCGC+CGG + chr3_2:53793807-53793826 None:intergenic 50.0%
CAGTGCTCATCTCATCTCGT+TGG + chr3_2:53794190-53794209 None:intergenic 50.0%
GCCCTTTGATGCGAACTCTG+TGG + chr3_2:53786698-53786717 None:intergenic 55.0%
! CGCTCTTTTCGGTTCCCCAT+TGG + chr3_2:53786754-53786773 None:intergenic 55.0%
! CAGCACGACGACGCTCTTTT+CGG + chr3_2:53786765-53786784 None:intergenic 55.0%
TTTGACTCTGCGACCAGCGT+TGG + chr3_2:53786794-53786813 None:intergenic 55.0%
! GATCTTTTCGCGGAACCCTC+CGG - chr3_2:53786817-53786836 Msa0411530:three_prime_UTR 55.0%
GCCCGCGATACATGACCATT+TGG + chr3_2:53787678-53787697 None:intergenic 55.0%
GCGTTTCACTTGCAGAGCCT+GGG - chr3_2:53787762-53787781 Msa0411530:intron 55.0%
TCACTTGCAGAGCCTGGGTT+TGG - chr3_2:53787767-53787786 Msa0411530:intron 55.0%
CACTTGCAGAGCCTGGGTTT+GGG - chr3_2:53787768-53787787 Msa0411530:intron 55.0%
!! CATGGGTTGGTACTGGGACT+TGG - chr3_2:53787832-53787851 Msa0411530:intron 55.0%
! GGTTGGTACTGGGACTTGGA+CGG - chr3_2:53787836-53787855 Msa0411530:CDS 55.0%
! GTTGGTACTGGGACTTGGAC+GGG - chr3_2:53787837-53787856 Msa0411530:CDS 55.0%
GCGTCATGTCTGCATTCCAC+TGG - chr3_2:53788690-53788709 Msa0411530:intron 55.0%
TCCGGCATCACCGTGTATAG+TGG + chr3_2:53788885-53788904 None:intergenic 55.0%
ACTATACACGGTGATGCCGG+AGG - chr3_2:53788884-53788903 Msa0411530:CDS 55.0%
TGTAGGGCTGCTGAGGTCTT+GGG - chr3_2:53789100-53789119 Msa0411530:intron 55.0%
GCAGCTTCAAGGGATTTCCG+AGG - chr3_2:53789198-53789217 Msa0411530:CDS 55.0%
AGGGATTTCCGAGGTTCAGG+CGG - chr3_2:53789207-53789226 Msa0411530:CDS 55.0%
! CCTTTTGCTCGATCCCTCGT+CGG + chr3_2:53789553-53789572 None:intergenic 55.0%
!!! GTGGGAAGTGCCTCAGGTTT+TGG - chr3_2:53790329-53790348 Msa0411530:intron 55.0%
GACTCCTGGCCAACACCATT+CGG + chr3_2:53791124-53791143 None:intergenic 55.0%
ACTGGCAGTCATGCGGAAAC+AGG - chr3_2:53791289-53791308 Msa0411530:intron 55.0%
GGCGCAACAAATGCATCCTC+AGG + chr3_2:53791538-53791557 None:intergenic 55.0%
TGCTCATTATCTGGGGGTGG+TGG + chr3_2:53791586-53791605 None:intergenic 55.0%
!! GGGGGCATTTGATCATCGTC+AGG + chr3_2:53791628-53791647 None:intergenic 55.0%
GGCGCTAGCTCCGAGTATTA+TGG - chr3_2:53791751-53791770 Msa0411530:intron 55.0%
! GTGGTGTTAGTGGGGCTGAT+AGG - chr3_2:53792101-53792120 Msa0411530:intron 55.0%
TGGATGGCAGCTGAGATGGA+CGG + chr3_2:53792142-53792161 None:intergenic 55.0%
ATCGTGGATGGCAGCTGAGA+TGG + chr3_2:53792146-53792165 None:intergenic 55.0%
AAGGTCCGGAGTTCGAACCT+CGG - chr3_2:53792411-53792430 Msa0411530:intron 55.0%
TTCGCACGCCACTCCTACAA+TGG + chr3_2:53793178-53793197 None:intergenic 55.0%
GGGTCTCCCAACTAATTGGC+AGG - chr3_2:53793459-53793478 Msa0411530:intron 55.0%
CATCAGAGACGACATGGACC+CGG - chr3_2:53794164-53794183 Msa0411530:intron 55.0%
CTCATCTCATCTCGTTGGCC+GGG + chr3_2:53794185-53794204 None:intergenic 55.0%
GCTCATCTCATCTCGTTGGC+CGG + chr3_2:53794186-53794205 None:intergenic 55.0%
! CGTGCTGCTCATTCCAACGC+TGG - chr3_2:53786778-53786797 Msa0411530:three_prime_UTR 60.0%
CGCGTTTCACTTGCAGAGCC+TGG - chr3_2:53787761-53787780 Msa0411530:intron 60.0%
CTCTGACTGTAGGGCTGCTG+AGG - chr3_2:53789093-53789112 Msa0411530:intron 60.0%
CTGTAGGGCTGCTGAGGTCT+TGG - chr3_2:53789099-53789118 Msa0411530:intron 60.0%
CCGACGAGGGATCGAGCAAA+AGG - chr3_2:53789550-53789569 Msa0411530:CDS 60.0%
!! GACTTCGTGGGAAGTGCCTC+AGG - chr3_2:53790323-53790342 Msa0411530:intron 60.0%
GGGGAGCAACCGAATGGTGT+TGG - chr3_2:53791112-53791131 Msa0411530:intron 60.0%
!! GCAACCGAATGGTGTTGGCC+AGG - chr3_2:53791117-53791136 Msa0411530:intron 60.0%
! CGCCGCCTCCTGATGATGAA+TGG - chr3_2:53791554-53791573 Msa0411530:CDS 60.0%
TGATCATCGTCAGGCGGTGG+TGG + chr3_2:53791619-53791638 None:intergenic 60.0%
CAAATGCCCCCTCTTCCACC+CGG - chr3_2:53791637-53791656 Msa0411530:intron 60.0%
TGGATCACCGGGTGGAAGAG+GGG + chr3_2:53791647-53791666 None:intergenic 60.0%
GTGGATCACCGGGTGGAAGA+GGG + chr3_2:53791648-53791667 None:intergenic 60.0%
AGTGGATCACCGGGTGGAAG+AGG + chr3_2:53791649-53791668 None:intergenic 60.0%
GTTGCAAGTGGATCACCGGG+TGG + chr3_2:53791655-53791674 None:intergenic 60.0%
TATGCAGGCGGGAGAAGGTC+AGG - chr3_2:53793338-53793357 Msa0411530:intron 60.0%
GGAGAAGGTCAGGCGCAAGA+GGG - chr3_2:53793348-53793367 Msa0411530:intron 60.0%
GTGGAGCCACCCAACTCTCC+TGG + chr3_2:53788866-53788885 None:intergenic 65.0%
! TCATCGTCAGGCGGTGGTGG+TGG + chr3_2:53791616-53791635 None:intergenic 65.0%
GGATCACCGGGTGGAAGAGG+GGG + chr3_2:53791646-53791665 None:intergenic 65.0%
GGTGGCCGAGGTTCGAACTC+CGG + chr3_2:53792419-53792438 None:intergenic 65.0%
GGGAGAAGGTCAGGCGCAAG+AGG - chr3_2:53793347-53793366 Msa0411530:intron 65.0%
GGCTCGCGCAACCCAAACCC+AGG + chr3_2:53787782-53787801 None:intergenic 70.0%
!! TCGTCAGGCGGTGGTGGTGG+AGG + chr3_2:53791613-53791632 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 53786583 53794510 53786583 ID=Msa0411530;Name=Msa0411530
chr3_2 mRNA 53786583 53794510 53786583 ID=Msa0411530-mRNA-1;Parent=Msa0411530;Name=Msa0411530-mRNA-1;_AED=0.10;_eAED=0.10;_QI=171|1|1|1|1|1|11|312|917
chr3_2 exon 53786583 53786978 53786583 ID=Msa0411530-mRNA-1:exon:10869;Parent=Msa0411530-mRNA-1
chr3_2 exon 53787613 53787748 53787613 ID=Msa0411530-mRNA-1:exon:10868;Parent=Msa0411530-mRNA-1
chr3_2 exon 53787836 53787909 53787836 ID=Msa0411530-mRNA-1:exon:10867;Parent=Msa0411530-mRNA-1
chr3_2 exon 53787987 53788079 53787987 ID=Msa0411530-mRNA-1:exon:10866;Parent=Msa0411530-mRNA-1
chr3_2 exon 53788238 53788317 53788238 ID=Msa0411530-mRNA-1:exon:10865;Parent=Msa0411530-mRNA-1
chr3_2 exon 53788822 53789037 53788822 ID=Msa0411530-mRNA-1:exon:10864;Parent=Msa0411530-mRNA-1
chr3_2 exon 53789162 53790219 53789162 ID=Msa0411530-mRNA-1:exon:10863;Parent=Msa0411530-mRNA-1
chr3_2 exon 53790336 53791060 53790336 ID=Msa0411530-mRNA-1:exon:10862;Parent=Msa0411530-mRNA-1
chr3_2 exon 53791488 53791597 53791488 ID=Msa0411530-mRNA-1:exon:10861;Parent=Msa0411530-mRNA-1
chr3_2 exon 53792134 53792226 53792134 ID=Msa0411530-mRNA-1:exon:10860;Parent=Msa0411530-mRNA-1
chr3_2 exon 53794255 53794510 53794255 ID=Msa0411530-mRNA-1:exon:10859;Parent=Msa0411530-mRNA-1
chr3_2 five_prime_UTR 53794340 53794510 53794340 ID=Msa0411530-mRNA-1:five_prime_utr;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53794255 53794339 53794255 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53792134 53792226 53792134 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53791488 53791597 53791488 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53790336 53791060 53790336 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53789162 53790219 53789162 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53788822 53789037 53788822 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53788238 53788317 53788238 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53787987 53788079 53787987 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53787836 53787909 53787836 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53787613 53787748 53787613 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 CDS 53786895 53786978 53786895 ID=Msa0411530-mRNA-1:cds;Parent=Msa0411530-mRNA-1
chr3_2 three_prime_UTR 53786583 53786894 53786583 ID=Msa0411530-mRNA-1:three_prime_utr;Parent=Msa0411530-mRNA-1
Gene Sequence

>Msa0411530

ATGGGGAACCGAAAAGAGCGTCGTCGTGCTGCTCATTCCAACGCTGGTCGCAGAGTCAAACTCGATCTTTTCGCGGAACCCTCCGGAGAGTTGGGTGGCTCCACTATACACGGTGATGCCGGAGGAGATACCAATTCACAACAGCATGATGGGTTACCCAATTCACCCTCTTCTTCAGGTCAACAATCACAAAATCCCCTTTTGTTACTTGGGCAATATAGTGATGATGAAGCCGACGAGGGATCGAGCAAAAGGCCTAATGATACAAAGGTGCATAGCCATGAAGAGGCTAACGGTGCACTTGATGAAGGATTCAGTGTCCCTGTAGATTCTGTTGCTCAGAATAATGGACATCAGGACACAATGCAAAATTTAACCTCGATGGATGTTGAATATAGTGAAAAAACTGAAAGTGACGTTGCTCTTGGTAATTTGCAAAATGAAATGGTTTCCAAAGATCAAACGGATGCTTCGGAAAATTTCGATGAGCGGGTTGGAAATGATACCAGTTCAGGATGGAAGATGGTGTTGCATGAAGAAAGCCAACATTATTACTACTGGAATGTTCAAACTGGGGAGACTTCGTGGGAAGTGCCTCAGGTTTTGGCTCAAGCTGATCATTTGACTAATGATCCTTTACCTCCTGCTTCTGTCAATGACAAAACCGATAATGTTACAGTTGGTGTGGATAACTCCAACATGCTCTCATCTGCAATTCTGGGTACGTCTGCTGCTTTCACAGTTGATGAAACTGTGGAAACCTTGGCGATTTCTCATAAAGATTTGCATGATCATGTGTCCCAAACGAATGGATGTAGCGAGGAATGTACAAATGAAAATAAGGGTTCTAATATCCATGGAGATGATTTGATAAGAAATGATGGTCTCATGAGTTTATCTTATGTTGGAGATCATTCAATAGGTGTTGAAGAACAGCAAGTAGAAAATGACTTTCCTTCTCGTCTTGTCCAACAGACTGAGAGTTTGTTAGAGATGCTGAAATCACTGAAAAAGTCAAAGGGAAATCTGCAAGGTCAGGATTCCTTGTCAAAGTATATGCTAGAGCTTGAGATTAGACTTTCTGATTTTAGGTCGCTTTCATCCTATGGATCATCTTTGCTTCCATTCTGGGTACACTCTGACAGGAAGATTAAAGTACTTGAATGTTTAATCAATGTTGAATTGTTGCAAACTGACAAATCAGAACATGATGAAGTAGAGGATAAACATGTACCTGTCGCTGAAGAATTTGGGGAGCAACCGAATGGTGTTGGCCAGGAGTCTGAAGTAGATCACAATGAAAACAAAGGGAGCTTTCTTACTTCTGAAGTTTCTAATGGATGTCAGACTGACGCTTCAGTTGAAGCTTTAAAGGATGTAAGCGATAAATTTTCCTCTGATGCTCAGCACATTCCATTGTCTATTTCTACTGGCAGTCATGCGGAAACAGGTCTTGAAGTCAGCACACAAATTGAAGCCACCATAAATCCGGAGGAATCAACCCATGAAAATGTGTGTAACATTGGGGAAGATGTTGATATGGATGTTGACATGGAAGTTGAAGATATGAATTCCTCAGAAAATACTGTCTTGGATGCATCAGTTGCAAATGATTATGTGCAAACAGACCAACCATTTCAGTCAAATCCACAAATTGAATACCATTCTTTGTTGCCTGAGGATGCATTTGTTGCGCCGCCTCCTGATGATGAATGGATCCCTCCACCACCCCCAGATAATGAGCATATGCCTCCACCACCACCGCCTGACGATGATCAAATGCCCCCTCTTCCACCCGGTGATCCACTTGCAACTTGCTATCATGTTATCCCATCTTACACAGAAACAGGCCAATCCCTTTCTTATGCTCAATATAATCCATCTTATCTTGGCGCTAGCTCCGAGTATTATGGTCAGACAGCTGCTGAAGTCCCTACTAGCAACATATATGGACAAATTGCTATGCAACCTGCACAGCTCTACTATAGTGCAGTTCCTAACATATATAGTGAAAGTCCTCAAGTTATGATCAATCCGACTGATCCCATTACTTATTATGAGGCTCAAGATGGAGCTGGTTTGAAACCCACACCGGATATCAATATTAGTGATTCTGGTGGTGTTAGTGGGGCTGATAGGGTCTCTAGTGATATTCCGTCCATCTCAGCTGCCATCCACGATCCTGCAACTGTTTCAGTTGATGCGAGTGTTTCATTGGCACCAGCTACCACTGAAGTTAATGCAGACAAGACCACCTCATCATTAGCTGCTAAAGCACAAACTAAAGTTGTCCGTAGTAGAAAACGGGCAGTTGCAGTTGGATCCTCATTGAAGTCTAATAAGAAGGTTTCAAGTCTGGTGGACAAGTGGAAGGCAGCTAAAGAGGAATTGCTTGAAGAAGAGGAAGAACCTGAGAGTGAGTATGATGCCTTAGAAAGAAAGCGCCAAAGGGAAATAGAGGAGTGGCGTGCGAAGCAAATTGCAAGTGGAGAGGCCAAAGACAATGCTAATTTTCAACCTTTGGGTGGTGATTGGCGGGAGAAGGTCAGGCGCAAGAGGGCAAAAGCAGCAAAGGAAACTGTTAGCAAAGCCGAAGTTGCAATTGAGAGTAGTAACCAACAGAAGCCAGATATTGTTGAACTTGCCAAGGGTCTCCCAACTAATTGGCAGGCTTATTGGGATGAAGCCTCAAAGAAGGTTTATTATGGTAATGTTGTCACATCAGAGACGACATGGACCCGGCCAACGAGATGA
Protein sequence

>Msa0411530

MGNRKERRRAAHSNAGRRVKLDLFAEPSGELGGSTIHGDAGGDTNSQQHDGLPNSPSSSGQQSQNPLLLLGQYSDDEADEGSSKRPNDTKVHSHEEANGALDEGFSVPVDSVAQNNGHQDTMQNLTSMDVEYSEKTESDVALGNLQNEMVSKDQTDASENFDERVGNDTSSGWKMVLHEESQHYYYWNVQTGETSWEVPQVLAQADHLTNDPLPPASVNDKTDNVTVGVDNSNMLSSAILGTSAAFTVDETVETLAISHKDLHDHVSQTNGCSEECTNENKGSNIHGDDLIRNDGLMSLSYVGDHSIGVEEQQVENDFPSRLVQQTESLLEMLKSLKKSKGNLQGQDSLSKYMLELEIRLSDFRSLSSYGSSLLPFWVHSDRKIKVLECLINVELLQTDKSEHDEVEDKHVPVAEEFGEQPNGVGQESEVDHNENKGSFLTSEVSNGCQTDASVEALKDVSDKFSSDAQHIPLSISTGSHAETGLEVSTQIEATINPEESTHENVCNIGEDVDMDVDMEVEDMNSSENTVLDASVANDYVQTDQPFQSNPQIEYHSLLPEDAFVAPPPDDEWIPPPPPDNEHMPPPPPPDDDQMPPLPPGDPLATCYHVIPSYTETGQSLSYAQYNPSYLGASSEYYGQTAAEVPTSNIYGQIAMQPAQLYYSAVPNIYSESPQVMINPTDPITYYEAQDGAGLKPTPDINISDSGGVSGADRVSSDIPSISAAIHDPATVSVDASVSLAPATTEVNADKTTSSLAAKAQTKVVRSRKRAVAVGSSLKSNKKVSSLVDKWKAAKEELLEEEEEPESEYDALERKRQREIEEWRAKQIASGEAKDNANFQPLGGDWREKVRRKRAKAAKETVSKAEVAIESSNQQKPDIVELAKGLPTNWQAYWDEASKKVYYGNVVTSETTWTRPTR*