AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0413110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0413110 MtrunA17_Chr3g0105291 92.850 1007 64 1 1 1007 125 1123 0.0 1909
Msa0413110 MtrunA17_Chr5g0430361 48.611 792 363 13 111 894 312 1067 0.0 707
Msa0413110 MtrunA17_Chr5g0430361 48.125 160 72 4 1 155 113 266 7.86e-35 144
Msa0413110 MtrunA17_Chr5g0407211 41.553 438 219 10 477 890 1 425 6.85e-110 347
Msa0413110 MtrunA17_Chr5g0407251 41.435 432 216 10 477 884 1 419 9.51e-109 344
Msa0413110 MtrunA17_Chr7g0270101 43.095 420 218 10 478 888 383 790 6.16e-107 351
Msa0413110 MtrunA17_Chr3g0134811 37.313 469 217 9 478 884 338 791 7.44e-98 327
Msa0413110 MtrunA17_Chr3g0134821 40.662 423 220 10 478 884 425 832 3.55e-94 318
Msa0413110 MtrunA17_Chr1g0205451 39.855 414 236 8 479 885 606 1013 2.69e-84 299
Msa0413110 MtrunA17_Chr2g0316251 36.765 408 253 5 479 884 762 1166 6.82e-83 293
Msa0413110 MtrunA17_Chr1g0185491 35.032 471 282 10 425 885 765 1221 7.70e-80 285
Msa0413110 MtrunA17_Chr3g0134851 34.579 428 183 9 481 884 110 464 4.53e-58 207
Msa0413110 MtrunA17_Chr7g0259981 32.484 314 186 6 583 894 13 302 9.97e-56 196
Msa0413110 MtrunA17_Chr4g0012501 75.862 116 24 1 1 112 136 251 8.61e-53 185
Msa0413110 MtrunA17_Chr7g0265211 27.290 513 283 12 444 884 453 947 2.06e-43 171
Msa0413110 MtrunA17_Chr1g0182481 27.896 423 241 10 490 867 472 875 1.19e-42 168
Msa0413110 MtrunA17_Chr1g0179841 26.932 453 257 9 490 882 362 800 9.43e-40 159
Msa0413110 MtrunA17_Chr4g0055731 23.864 528 316 18 374 884 11 469 5.72e-32 131
Msa0413110 MtrunA17_Chr4g0028111 23.394 436 238 10 511 860 137 562 4.60e-28 120
Msa0413110 MtrunA17_Chr4g0027811 24.236 458 226 12 483 885 188 579 1.49e-27 119
Msa0413110 MtrunA17_Chr4g0025251 30.268 261 155 9 645 885 449 702 7.40e-24 108
Msa0413110 MtrunA17_Chr2g0320451 32.275 189 114 4 703 889 852 1028 3.42e-22 103
Msa0413110 MtrunA17_Chr2g0320451 25.316 237 118 3 504 692 489 714 1.64e-16 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0413110 AT5G58610.3 35.481 978 507 24 2 925 143 1050 0.0 564
Msa0413110 AT5G58610.7 35.481 978 507 24 2 925 134 1041 0.0 563
Msa0413110 AT5G58610.5 35.481 978 507 24 2 925 134 1041 0.0 563
Msa0413110 AT5G58610.8 35.974 934 479 21 2 884 143 1008 0.0 558
Msa0413110 AT5G58610.2 35.974 934 479 21 2 884 143 1008 0.0 558
Msa0413110 AT5G58610.6 34.867 978 487 27 2 925 134 1015 1.55e-171 530
Msa0413110 AT5G58610.1 34.867 978 487 27 2 925 134 1015 1.87e-171 530
Msa0413110 AT5G58610.9 34.580 882 458 21 2 832 134 947 3.02e-158 492
Msa0413110 AT5G58610.10 34.580 882 458 21 2 832 143 956 3.41e-158 492
Msa0413110 AT5G58610.4 45.155 516 270 7 420 925 307 819 1.35e-146 459
Msa0413110 AT5G58610.11 33.412 844 443 21 2 794 134 909 6.52e-139 440
Msa0413110 AT1G05380.3 38.565 446 261 8 453 890 494 934 3.26e-91 316
Msa0413110 AT1G05380.1 38.565 446 261 8 453 890 494 934 3.26e-91 316
Msa0413110 AT1G05380.2 38.565 446 261 8 453 890 494 934 3.26e-91 316
Msa0413110 AT3G14980.3 35.714 462 279 7 446 893 575 1032 1.01e-87 304
Msa0413110 AT3G14980.5 35.714 462 279 7 446 893 530 987 1.22e-87 306
Msa0413110 AT3G14980.6 35.714 462 279 7 446 893 575 1032 1.77e-87 306
Msa0413110 AT3G14980.1 35.714 462 279 7 446 893 575 1032 1.77e-87 306
Msa0413110 AT3G14980.2 35.714 462 279 7 446 893 575 1032 1.77e-87 306
Msa0413110 AT5G36740.5 30.878 638 380 18 294 894 353 966 2.80e-87 305
Msa0413110 AT5G36740.1 30.878 638 380 18 294 894 353 966 2.80e-87 305
Msa0413110 AT5G36740.4 30.093 648 382 19 294 894 200 823 2.23e-83 291
Msa0413110 AT4G14920.3 36.000 450 278 7 452 897 553 996 4.70e-77 275
Msa0413110 AT4G14920.2 36.384 437 268 7 452 884 553 983 9.33e-77 274
Msa0413110 AT4G14920.1 36.384 437 268 7 452 884 553 983 9.33e-77 274
Msa0413110 AT5G36670.4 28.593 654 388 20 294 894 353 980 3.11e-74 267
Msa0413110 AT5G36670.5 28.593 654 388 20 294 894 353 980 3.11e-74 267
Msa0413110 AT5G36670.3 28.012 664 389 21 294 894 200 837 2.94e-70 254
Msa0413110 AT5G36670.2 30.018 563 340 17 294 826 353 891 4.63e-70 251
Msa0413110 AT5G36740.2 30.018 563 340 17 294 826 353 891 4.63e-70 251
Msa0413110 AT5G36740.3 30.018 563 340 17 294 826 353 891 4.63e-70 251
Msa0413110 AT5G36670.1 28.012 664 389 21 294 894 353 990 5.14e-70 254
Msa0413110 AT5G63900.1 42.997 307 143 11 586 884 258 540 1.24e-66 234
Msa0413110 AT3G14980.4 33.699 365 224 7 446 796 575 935 3.09e-59 220
Msa0413110 AT2G27980.1 29.204 452 240 10 515 902 637 1072 7.29e-47 183
Msa0413110 AT2G37520.1 28.704 432 234 10 506 882 401 813 4.22e-44 173
Msa0413110 AT3G53680.1 27.689 437 255 8 506 894 418 841 1.00e-42 169
Msa0413110 AT3G53680.2 27.689 437 255 8 506 894 420 843 1.20e-42 168
Msa0413110 AT2G36720.1 26.754 456 254 10 490 882 533 971 1.33e-37 153
Msa0413110 AT2G36720.2 26.754 456 254 10 490 882 533 971 1.33e-37 153

Find 249 sgRNAs with CRISPR-Local

Find 557 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACCTCTTCTTCTATTATT+TGG 0.106047 3_2:-57322151 None:intergenic
GGGCACCGTACTGTGCTTTC+TGG 0.111625 3_2:+57322589 Msa0413110:CDS
ATTCAGAAATCGACTATTTC+TGG 0.151862 3_2:+57322247 Msa0413110:CDS
AACCAAGACAGAACATTTAA+AGG 0.177176 3_2:-57322511 None:intergenic
CCAGTTGGCAAAACCGAATT+TGG 0.185947 3_2:-57326717 None:intergenic
CACATAACTTCCGGATTTAC+TGG 0.222960 3_2:-57323343 None:intergenic
CGGTATCGGTAAGGCAAATT+TGG 0.235298 3_2:+57321243 Msa0413110:CDS
GAAGCGTAGGATTTATAATT+AGG 0.235350 3_2:+57328204 Msa0413110:exon
ACCAAGTGCCAATATCTTTC+TGG 0.242341 3_2:+57322708 Msa0413110:CDS
GAGAATATTCTGAATGATAA+TGG 0.245574 3_2:+57320864 Msa0413110:five_prime_UTR
TAATAGTAAAAGTGGATTAT+TGG 0.263495 3_2:+57323698 Msa0413110:CDS
CATCAGAAGCTCACGCAATT+AGG 0.274638 3_2:+57326525 Msa0413110:intron
AATTGTGATCTTTCAAAGTT+TGG 0.278158 3_2:-57326624 None:intergenic
GGGTTTCTATTCCGTACTTC+TGG 0.279523 3_2:+57325835 Msa0413110:CDS
TGAATGGTCAAGGTATTTAA+AGG 0.280119 3_2:-57322277 None:intergenic
CATCGCTTCGGCGCTTTGGC+AGG 0.290256 3_2:-57322414 None:intergenic
CCGAAAATGGTCTTGATATA+AGG 0.291887 3_2:+57321873 Msa0413110:CDS
ATTTGTTCCGTTTGCCGCTT+TGG 0.297414 3_2:+57322841 Msa0413110:CDS
GATACATGGACCGGCGCTTT+TGG 0.305649 3_2:+57326588 Msa0413110:CDS
GCAAGAAGAGGATTCCTTTA+GGG 0.310158 3_2:-57323778 None:intergenic
AACTCTTCTCCGTCCGAAAA+TGG 0.313482 3_2:+57321860 Msa0413110:CDS
TTCATTTCATCACCCAAATC+AGG 0.315241 3_2:-57321110 None:intergenic
CCTGCAATCGGGCATATAAA+AGG 0.318750 3_2:+57322065 Msa0413110:CDS
GATCTTGCATTATTTGTATC+TGG 0.322209 3_2:-57322756 None:intergenic
AGTGAGTGTTTCAAGTGTTT+TGG 0.328028 3_2:+57320908 Msa0413110:five_prime_UTR
TTCTGACTCCAAGGCAACTA+TGG 0.328818 3_2:+57321673 Msa0413110:CDS
TGAAATGAAGGTCGGAATTC+AGG 0.335691 3_2:+57321124 Msa0413110:CDS
GAGAAATGTGATCTTAAGTA+TGG 0.340078 3_2:+57320996 Msa0413110:five_prime_UTR
TGCAAGAAGAGGATTCCTTT+AGG 0.345444 3_2:-57323779 None:intergenic
GCTTGGTAAACTTCAGAAAC+TGG 0.348392 3_2:-57326879 None:intergenic
TTGTCCGCACCCACTGAAAC+TGG 0.359349 3_2:-57323624 None:intergenic
GGAGTAAACATGGGAGGATT+AGG 0.360304 3_2:+57320949 Msa0413110:five_prime_UTR
CACCTTCCCACCAAGCTTCC+TGG 0.361570 3_2:-57321040 None:intergenic
TTTCTCGGCCTTGAAACTTC+CGG 0.373286 3_2:+57321394 Msa0413110:CDS
CATGTTGTTACCAAGGTCTA+AGG 0.373440 3_2:+57322546 Msa0413110:CDS
AAATATTCCCTCTCCAAATT+CGG 0.374447 3_2:+57326704 Msa0413110:CDS
GAAGCGATGAATCAACTCTA+AGG 0.378506 3_2:+57322428 Msa0413110:CDS
TGGTCAGTGTAGCAACTATT+AGG 0.379578 3_2:+57325873 Msa0413110:CDS
GATGGACTAAGAGGCACATT+TGG 0.383730 3_2:-57321920 None:intergenic
TGGAAACATCTTGCATATCT+TGG 0.388953 3_2:+57321716 Msa0413110:CDS
TGTTGTTGGTCCACAGGAAT+TGG 0.390924 3_2:-57328069 None:intergenic
AATGCAAGATCACAAGTCTA+AGG 0.396731 3_2:+57322768 Msa0413110:CDS
GATTAGGCCAGTGCCTCCTT+TGG 0.397024 3_2:+57320965 Msa0413110:five_prime_UTR
GAACTTGATAATAGTAAAAG+TGG 0.398807 3_2:+57323690 Msa0413110:CDS
ACCATCGGCCAGAAAGATAT+TGG 0.399541 3_2:-57322716 None:intergenic
AAACTTCCGGAGATGGAATC+AGG 0.401835 3_2:+57321407 Msa0413110:CDS
TCGCATATTAATGGATGAAT+TGG 0.403985 3_2:+57326091 Msa0413110:CDS
TGGAATGTGTCGCATATTAA+TGG 0.405995 3_2:+57326082 Msa0413110:CDS
ATTACTAGCACTACTGCTTC+CGG 0.409786 3_2:-57326850 None:intergenic
GGCACCGTACTGTGCTTTCT+GGG 0.413489 3_2:+57322590 Msa0413110:CDS
TTTGTCCATCGTGTCGATGC+GGG 0.414181 3_2:+57323057 Msa0413110:CDS
GTAGCCAAAGCAAATTCAAC+GGG 0.414503 3_2:+57323084 Msa0413110:CDS
TGTTGTTCCTCCAGCTGAAA+AGG 0.415498 3_2:+57321472 Msa0413110:CDS
ACTTAATCGAATGAATTTCC+AGG 0.417064 3_2:+57325814 Msa0413110:CDS
TTTCATTCTGGCAATGTTGT+TGG 0.419236 3_2:-57328083 None:intergenic
ACAGCCCTTCAAAGTCTGTT+AGG 0.423835 3_2:+57323597 Msa0413110:CDS
TGATGGTACCCGGAAAATCT+AGG 0.425301 3_2:-57326662 None:intergenic
TCATAAGACGTGTCTTGGTC+TGG 0.426619 3_2:+57322903 Msa0413110:CDS
ATTATTGCAATGGATTCCAT+TGG 0.427186 3_2:-57321789 None:intergenic
CTTCTTCTATTATTTGGAGG+TGG 0.430595 3_2:-57322145 None:intergenic
AACCTTTAAATGTTCTGTCT+TGG 0.434230 3_2:+57322509 Msa0413110:CDS
TTCCATCTCCGGAAGTTTCA+AGG 0.435157 3_2:-57321402 None:intergenic
CCGGCTTTCCACATAACTTC+CGG 0.435342 3_2:-57323352 None:intergenic
TCCTTCGAATTTCATGCTAC+TGG 0.436416 3_2:+57322670 Msa0413110:CDS
CCTCTTCTTCTATTATTTGG+AGG 0.441510 3_2:-57322148 None:intergenic
TCTTAGGGTCCTTGGAGATA+AGG 0.443751 3_2:+57326013 Msa0413110:intron
GGCAACTATGGCATCTTTGA+AGG 0.445667 3_2:+57321685 Msa0413110:CDS
AGTAGAGATACCAGTAAATC+CGG 0.447861 3_2:+57323333 Msa0413110:CDS
CTCTTCTTGCAGAGATCTGA+TGG 0.450854 3_2:+57323791 Msa0413110:CDS
CAAATTTGCCTTACCGATAC+CGG 0.451165 3_2:-57321242 None:intergenic
TTTGTGGAGACACTTGATAA+TGG 0.452655 3_2:+57321331 Msa0413110:CDS
GTTCACACTGAATGCATGTA+AGG 0.456612 3_2:-57323127 None:intergenic
TGAATGAGAAGAAGGATTTG+TGG 0.456943 3_2:+57321315 Msa0413110:CDS
TCTTCTTGAGTGCATGTTTG+TGG 0.458079 3_2:-57322042 None:intergenic
GGACAAAACCATTCACCATC+AGG 0.458765 3_2:-57323041 None:intergenic
GGGATGAAGTTACGGAGAGA+TGG 0.459836 3_2:+57321168 Msa0413110:CDS
GATGGGAGCGACGAGGGAAA+TGG 0.459932 3_2:+57321186 Msa0413110:CDS
TCATGAGGAAAATGTTGATC+AGG 0.461489 3_2:+57322297 Msa0413110:CDS
GATTGAGGAGTTGTATCTTC+CGG 0.462600 3_2:+57321223 Msa0413110:CDS
CACTCAAGAAGACCTGCAAT+CGG 0.463785 3_2:+57322053 Msa0413110:CDS
CGAATAAATCAAGTGCAAAT+CGG 0.466377 3_2:+57322359 Msa0413110:CDS
TTAGAGTTGATTCATCGCTT+CGG 0.468082 3_2:-57322426 None:intergenic
GATTCATCGCTTCGGCGCTT+TGG 0.468963 3_2:-57322418 None:intergenic
CAAAGATGCCATAGTTGCCT+TGG 0.470190 3_2:-57321681 None:intergenic
AGGTGAATTATTATCTGAAA+AGG 0.470293 3_2:+57321427 Msa0413110:CDS
AAAGTATATATGTGCATAAG+TGG 0.470667 3_2:+57328338 Msa0413110:three_prime_UTR
GGCCTTGAAACTTCCGGAGA+TGG 0.471082 3_2:+57321400 Msa0413110:CDS
AGGCAAGAGGAAGACGCCTT+TGG 0.471117 3_2:-57322475 None:intergenic
GAAGGCGATAATGATAATCT+TGG 0.474333 3_2:+57327749 Msa0413110:CDS
TCAGGATTGGGATGAAGTTA+CGG 0.474444 3_2:+57321160 Msa0413110:CDS
AGAATATTCTGAATGATAAT+GGG 0.475569 3_2:+57320865 Msa0413110:five_prime_UTR
ATCGTTGGATCAACAAATGA+TGG 0.477086 3_2:+57326923 Msa0413110:CDS
TGGCAATGTTGTTGGTCCAC+AGG 0.477715 3_2:-57328075 None:intergenic
TCTGGAGAGAAATGAAGATC+TGG 0.483681 3_2:+57325853 Msa0413110:CDS
GATAGACAAAAGAGAATCGT+TGG 0.484937 3_2:+57326908 Msa0413110:CDS
CAAAATGAAGTTTCATGCAA+CGG 0.485051 3_2:+57321509 Msa0413110:CDS
AAAAGTGCTCTCTTGTAAAG+TGG 0.486293 3_2:+57328136 Msa0413110:CDS
ACATATTGCTTAACAGCATC+GGG 0.489875 3_2:-57321644 None:intergenic
AATTCACCTGATTCCATCTC+CGG 0.489949 3_2:-57321413 None:intergenic
ATGACGACGATACTGAAATC+TGG 0.490750 3_2:-57326060 None:intergenic
AATGCGGATTACTCAGGATT+GGG 0.491002 3_2:+57321148 Msa0413110:CDS
ATTTAAAGTCAAATTGTTCG+TGG 0.491332 3_2:+57321588 Msa0413110:CDS
AACTCAACCAAAGGAGGCAC+TGG 0.491829 3_2:-57320972 None:intergenic
ATTCTGAATGATAATGGGTT+GGG 0.491960 3_2:+57320870 Msa0413110:five_prime_UTR
TTATTGCAATGGATTCCATT+GGG 0.492268 3_2:-57321788 None:intergenic
AGTAAACTTTATTATTGCAA+TGG 0.492400 3_2:-57321799 None:intergenic
AACATCTTGCATATCTTGGA+TGG 0.495598 3_2:+57321720 Msa0413110:CDS
CAGTAAATCCGGAAGTTATG+TGG 0.497239 3_2:+57323344 Msa0413110:CDS
TTCGCCTCCAAAGCGGCAAA+CGG 0.498884 3_2:-57322848 None:intergenic
TTCATTTCTCTCCAGAAGTA+CGG 0.498951 3_2:-57325846 None:intergenic
GGAGTTGTATCTTCCGGTAT+CGG 0.502507 3_2:+57321229 Msa0413110:CDS
TATTCTGAATGATAATGGGT+TGG 0.503416 3_2:+57320869 Msa0413110:five_prime_UTR
CCTCCAAATAATAGAAGAAG+AGG 0.505734 3_2:+57322148 Msa0413110:CDS
GAGAAGAATTTCTGTTTCAG+TGG 0.506628 3_2:-57322187 None:intergenic
GTAGCTGAAGTACCTCTTGT+TGG 0.510042 3_2:+57326035 Msa0413110:CDS
TTAAAGGTTTATGATGTGAA+AGG 0.510336 3_2:-57322495 None:intergenic
AAATGCGGATTACTCAGGAT+TGG 0.511598 3_2:+57321147 Msa0413110:CDS
GATATTGGCACTTGGTCTGA+TGG 0.512828 3_2:-57322701 None:intergenic
GCTGTCCTAACAGACTTTGA+AGG 0.513374 3_2:-57323602 None:intergenic
GCCAATATCTTTCTGGCCGA+TGG 0.514917 3_2:+57322715 Msa0413110:CDS
CATCAGATCTCTGCAAGAAG+AGG 0.515594 3_2:-57323790 None:intergenic
CACATATTGCTTAACAGCAT+CGG 0.516322 3_2:-57321645 None:intergenic
CGAAAACAAGATGCTATCTC+CGG 0.516683 3_2:+57326831 Msa0413110:CDS
GTTAGGACAGCCAGTTTCAG+TGG 0.517338 3_2:+57323614 Msa0413110:CDS
GGAGGTAGTTGGTGACTACT+TGG 0.518838 3_2:+57321352 Msa0413110:CDS
ATGGACATTGAATGAGAAGA+AGG 0.520484 3_2:+57321307 Msa0413110:CDS
GGTACTGAGATCAAATGAAA+GGG 0.522206 3_2:+57322450 Msa0413110:CDS
TACCAGGAAGCTTGGTGGGA+AGG 0.523101 3_2:+57321038 Msa0413110:five_prime_UTR
TGTTCCGTTTGCCGCTTTGG+AGG 0.523366 3_2:+57322844 Msa0413110:CDS
AGGATCTCCCTGATGGTGAA+TGG 0.525582 3_2:+57323033 Msa0413110:intron
TCAGGAAATGCGGATTACTC+AGG 0.525665 3_2:+57321142 Msa0413110:CDS
GGACGGAGAAGAGTTCATCA+TGG 0.529822 3_2:-57321852 None:intergenic
TGAATGTTTCGAGCCCCTAA+AGG 0.530764 3_2:+57323764 Msa0413110:CDS
ATGTAAATTACCAGGAAGCT+TGG 0.532737 3_2:+57321030 Msa0413110:five_prime_UTR
CTTAATCGAATGAATTTCCA+GGG 0.533875 3_2:+57325815 Msa0413110:CDS
GGGTACTGAGATCAAATGAA+AGG 0.534729 3_2:+57322449 Msa0413110:CDS
TTTAAAGTCAAATTGTTCGT+GGG 0.535401 3_2:+57321589 Msa0413110:CDS
GGATGAAGTTACGGAGAGAT+GGG 0.535957 3_2:+57321169 Msa0413110:CDS
CTAGACGAAGGAAGGCGAAA+GGG 0.537831 3_2:+57328175 Msa0413110:CDS
ATCATCTGAAAGCAGAAGGA+TGG 0.539714 3_2:+57322110 Msa0413110:CDS
CTACTTGGCTGTTACAGTAA+AGG 0.541628 3_2:+57321367 Msa0413110:CDS
GAATGATAAGTGTGATGGAA+TGG 0.545053 3_2:+57321067 Msa0413110:exon
TCTTGTAAAGTGGAGTGGAC+TGG 0.545279 3_2:+57328146 Msa0413110:CDS
ATCAAATGAAAGGGTGCCAA+AGG 0.545984 3_2:+57322459 Msa0413110:CDS
CCGGAAGTTATGTGGAAAGC+CGG 0.546646 3_2:+57323352 Msa0413110:CDS
TCTACCACAGTGGGAACAGC+AGG 0.548324 3_2:-57326567 None:intergenic
TTCCCACTGTGGTAGATACA+TGG 0.549468 3_2:+57326574 Msa0413110:CDS
AATTTGCCGTGATTGGTGAA+TGG 0.552298 3_2:+57321288 Msa0413110:CDS
CATGTATAGGATCTCCCTGA+TGG 0.557404 3_2:+57323026 Msa0413110:intron
TGCTCTCTTGTAAAGTGGAG+TGG 0.557520 3_2:+57328141 Msa0413110:CDS
AAATTACCAGGAAGCTTGGT+GGG 0.557807 3_2:+57321034 Msa0413110:five_prime_UTR
CAATGTCCATTCACCAATCA+CGG 0.558049 3_2:-57321294 None:intergenic
AGATTTCAGTATCGTCGTCA+TGG 0.558925 3_2:+57326062 Msa0413110:CDS
TTCTGGCACATGATGGTACC+CGG 0.559347 3_2:-57326672 None:intergenic
TCATTTCATCACCCAAATCA+GGG 0.559352 3_2:-57321109 None:intergenic
ATCGGGTCATGGAGTAAACA+TGG 0.561301 3_2:+57320939 Msa0413110:five_prime_UTR
TCATATCATAAGACGTGTCT+TGG 0.562434 3_2:+57322898 Msa0413110:CDS
ATCGGAAGCGAAAACGCTTG+AGG 0.563012 3_2:+57322377 Msa0413110:CDS
GAAGTTTCATGCAACGGTGC+TGG 0.563913 3_2:+57321515 Msa0413110:CDS
ACTCAAGAAGACCTGCAATC+GGG 0.566161 3_2:+57322054 Msa0413110:CDS
CAAGAAGAGGATTCCTTTAG+GGG 0.566868 3_2:-57323777 None:intergenic
CGGAGAGATGGGAGCGACGA+GGG 0.568858 3_2:+57321180 Msa0413110:CDS
CGAAATCATCTGAAAGCAGA+AGG 0.569282 3_2:+57322106 Msa0413110:CDS
CTGCGGAAAAGACTGTGAAA+AGG 0.570141 3_2:+57323377 Msa0413110:CDS
CTGTCCTAACAGACTTTGAA+GGG 0.570641 3_2:-57323601 None:intergenic
TGGTATTCCACAATGGCTTG+AGG 0.570911 3_2:-57322022 None:intergenic
TCATCTGCCACTGCAACAGA+TGG 0.573346 3_2:-57321986 None:intergenic
TGTATCTTCCGGTATCGGTA+AGG 0.573927 3_2:+57321234 Msa0413110:CDS
TTAGGACAGCCAGTTTCAGT+GGG 0.574149 3_2:+57323615 Msa0413110:CDS
ACATCTTGCATATCTTGGAT+GGG 0.574776 3_2:+57321721 Msa0413110:CDS
GGAACATGACAGTCACCGGC+AGG 0.574813 3_2:-57321899 None:intergenic
ATTAATGGATGAATTGGAGA+AGG 0.579634 3_2:+57326097 Msa0413110:CDS
GAAGCTCACGCAATTAGGAC+TGG 0.582295 3_2:+57326530 Msa0413110:intron
GCCAGTAGCATGAAATTCGA+AGG 0.587705 3_2:-57322671 None:intergenic
AAATACCTTGACCATTCATG+AGG 0.588685 3_2:+57322282 Msa0413110:CDS
GGCAAAACCGAATTTGGAGA+GGG 0.589581 3_2:-57326711 None:intergenic
TTTGTTGAAGGAGAATGAAG+TGG 0.590519 3_2:+57328249 Msa0413110:three_prime_UTR
AAAGAAAGAAGCTATAACTG+TGG 0.593498 3_2:-57328294 None:intergenic
ACAGCCAGTTTCAGTGGGTG+CGG 0.594757 3_2:+57323620 Msa0413110:CDS
ATTTGGAACATGACAGTCAC+CGG 0.595709 3_2:-57321903 None:intergenic
TAAATTACCAGGAAGCTTGG+TGG 0.595722 3_2:+57321033 Msa0413110:five_prime_UTR
GCCAGAAAGATATTGGCACT+TGG 0.596693 3_2:-57322709 None:intergenic
TACAGGTACAAGCCACCCAA+TGG 0.597089 3_2:+57321773 Msa0413110:CDS
TCTGGGCGAATAACTCATGA+AGG 0.597089 3_2:+57322607 Msa0413110:CDS
TGTAGCCAAAGCAAATTCAA+CGG 0.597213 3_2:+57323083 Msa0413110:CDS
CTTTGAAAATCCAAAAGCGC+CGG 0.597314 3_2:-57326598 None:intergenic
TGTGCTTGCTTCTGACTCCA+AGG 0.601206 3_2:+57321664 Msa0413110:CDS
GATGGAAGCCTCACAACTAG+AGG 0.605377 3_2:-57321968 None:intergenic
TGGATGGTGATATCGGGTCA+TGG 0.606117 3_2:+57320928 Msa0413110:five_prime_UTR
TGATAAGTGTGATGGAATGG+AGG 0.608979 3_2:+57321070 Msa0413110:exon
CACTTGATAATGGAGGTAGT+TGG 0.609618 3_2:+57321341 Msa0413110:CDS
ATGGGAAATTGACATTGACC+TGG 0.610133 3_2:+57321739 Msa0413110:CDS
GGTGTACTCTAGACGAAGGA+AGG 0.610377 3_2:+57328167 Msa0413110:CDS
GTGTGTTGATGTAAATTACC+AGG 0.611042 3_2:+57321022 Msa0413110:five_prime_UTR
GTTGTGAATGATAAGTGTGA+TGG 0.611286 3_2:+57321062 Msa0413110:five_prime_UTR
TGATTTGGGTGATGAAATGA+AGG 0.612944 3_2:+57321112 Msa0413110:CDS
TTGCAATGGATTCCATTGGG+TGG 0.613137 3_2:-57321785 None:intergenic
TTCTCAAACTCAACCAAAGG+AGG 0.613689 3_2:-57320978 None:intergenic
TTGGGTGATGAAATGAAGGT+CGG 0.615563 3_2:+57321116 Msa0413110:CDS
TAAGACGTGTCTTGGTCTGG+AGG 0.616442 3_2:+57322906 Msa0413110:CDS
TATGTGGAAAGCCGGTTCTG+CGG 0.616945 3_2:+57323360 Msa0413110:CDS
AGTGTGATGGAATGGAGGAG+AGG 0.617309 3_2:+57321075 Msa0413110:exon
TAGACGAAGGAAGGCGAAAG+GGG 0.617367 3_2:+57328176 Msa0413110:CDS
GAAAGGGGAACATGAAGCGT+AGG 0.617607 3_2:+57328191 Msa0413110:CDS
AAGCGATGAATCAACTCTAA+GGG 0.620220 3_2:+57322429 Msa0413110:CDS
TTTATGATGTGAAAGGCAAG+AGG 0.620240 3_2:-57322488 None:intergenic
CTTGATATAAGGCATCCTGC+CGG 0.620590 3_2:+57321884 Msa0413110:CDS
TTCGCCCAGAAAGCACAGTA+CGG 0.622172 3_2:-57322594 None:intergenic
AGATAAGAGCGATCTACCAT+CGG 0.623826 3_2:-57322731 None:intergenic
ATGTTTGTGGTATTCCACAA+TGG 0.624693 3_2:-57322029 None:intergenic
TCTAGACGAAGGAAGGCGAA+AGG 0.625198 3_2:+57328174 Msa0413110:CDS
GAGGCTTCCATCTGTTGCAG+TGG 0.625585 3_2:+57321979 Msa0413110:CDS
GGCGGAGCAACCAATTCCTG+TGG 0.627539 3_2:+57328059 Msa0413110:intron
AAGTATATATGTGCATAAGT+GGG 0.628769 3_2:+57328339 Msa0413110:three_prime_UTR
TGAAATCTGGTACCAACAAG+AGG 0.629514 3_2:-57326047 None:intergenic
CACATATATACTTTGTACCA+AGG 0.630385 3_2:-57328329 None:intergenic
TGGCAAAACCGAATTTGGAG+AGG 0.630456 3_2:-57326712 None:intergenic
CCACACAGTCATTTGCGTCA+AGG 0.632292 3_2:+57322805 Msa0413110:CDS
ACTGTGGTAGATACATGGAC+CGG 0.633569 3_2:+57326579 Msa0413110:CDS
ATGCAACGGTGCTGGTGAAG+CGG 0.634047 3_2:+57321523 Msa0413110:CDS
AAACGCTTGAGGAATTCAGA+TGG 0.640084 3_2:+57322388 Msa0413110:CDS
GAAGTACGGAATAGAAACCC+TGG 0.641639 3_2:-57325832 None:intergenic
CTTCAGCTACCTTATCTCCA+AGG 0.642106 3_2:-57326022 None:intergenic
AAGTTCACAACTCTCAGAGT+CGG 0.642483 3_2:-57323673 None:intergenic
TTATTGTCCTCAAGCCATTG+TGG 0.643240 3_2:+57322015 Msa0413110:CDS
GTGGAGACACTTGATAATGG+AGG 0.645022 3_2:+57321334 Msa0413110:CDS
CATTTCTCAAACTCAACCAA+AGG 0.645043 3_2:-57320981 None:intergenic
GCAAGATCACAAGTCTAAGG+AGG 0.646340 3_2:+57322771 Msa0413110:CDS
GTCCATGTATCTACCACAGT+GGG 0.654636 3_2:-57326576 None:intergenic
GAGTATCTCCTCTAGTTGTG+AGG 0.656154 3_2:+57321960 Msa0413110:CDS
CAAATCCCGCATCGACACGA+TGG 0.658482 3_2:-57323062 None:intergenic
ACAGCAACATGTTGTTACCA+AGG 0.659467 3_2:+57322539 Msa0413110:CDS
CACGTCTTATGATATGAAGA+CGG 0.660424 3_2:-57322892 None:intergenic
GACAAAACCATTCACCATCA+GGG 0.668378 3_2:-57323040 None:intergenic
ACGGAGAGATGGGAGCGACG+AGG 0.671386 3_2:+57321179 Msa0413110:CDS
AGGTCGGAATTCAGGAAATG+CGG 0.672442 3_2:+57321132 Msa0413110:CDS
TCACAACTAGAGGAGATACT+CGG 0.675835 3_2:-57321958 None:intergenic
TTTACCTGCTGTTCCCACTG+TGG 0.676231 3_2:+57326563 Msa0413110:CDS
TCGGGTCATGGAGTAAACAT+GGG 0.677391 3_2:+57320940 Msa0413110:five_prime_UTR
TGGGTGCGGACAATCTAACA+TGG 0.678752 3_2:+57323634 Msa0413110:CDS
AAAGAAGTTCGCCTCCAAAG+CGG 0.687855 3_2:-57322855 None:intergenic
CCTTGACGCAAATGACTGTG+TGG 0.688106 3_2:-57322805 None:intergenic
TGTTATCGACTGTGTCACCA+TGG 0.695665 3_2:+57327778 Msa0413110:CDS
GGTCATGGAGTAAACATGGG+AGG 0.696581 3_2:+57320943 Msa0413110:five_prime_UTR
GACTGGTGTACTCTAGACGA+AGG 0.706505 3_2:+57328163 Msa0413110:CDS
TGGGAAATTGACATTGACCT+GGG 0.718631 3_2:+57321740 Msa0413110:CDS
AGCCAAAGCAAATTCAACGG+GGG 0.735187 3_2:+57323086 Msa0413110:CDS
TAGCCAAAGCAAATTCAACG+GGG 0.739394 3_2:+57323085 Msa0413110:CDS
GGTCCATGTATCTACCACAG+TGG 0.749610 3_2:-57326577 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAAAAATAAAATTTT+GGG - chr3_2:57325013-57325032 None:intergenic 0.0%
!!! AAAAAAAAAAAATAAAATTT+TGG - chr3_2:57325014-57325033 None:intergenic 0.0%
!! TAAATTGTATAAATGTTTAT+AGG - chr3_2:57325699-57325718 None:intergenic 10.0%
!! AATTAATTAAGATATAAAGT+AGG - chr3_2:57326238-57326257 None:intergenic 10.0%
!!! AATATATTTTGTAATCTATT+TGG + chr3_2:57327224-57327243 Msa0413110:intron 10.0%
!!! TACCTTTTATATTTTGTTAT+AGG + chr3_2:57323884-57323903 Msa0413110:intron 15.0%
!! AAACAAAATAACAGAAAAAA+GGG - chr3_2:57325432-57325451 None:intergenic 15.0%
!!! TGAATTATTGTTGTATTTTT+CGG + chr3_2:57325750-57325769 Msa0413110:intron 15.0%
!!! TTAACTATTTCATTTTTCTT+AGG + chr3_2:57325997-57326016 Msa0413110:intron 15.0%
!!! TAACTATTTCATTTTTCTTA+GGG + chr3_2:57325998-57326017 Msa0413110:intron 15.0%
!! TATGATGATAAAAATGAAAA+GGG - chr3_2:57326177-57326196 None:intergenic 15.0%
!! TTATGATGATAAAAATGAAA+AGG - chr3_2:57326178-57326197 None:intergenic 15.0%
!!! AATATATGTGATTTGTATAT+TGG + chr3_2:57326196-57326215 Msa0413110:intron 15.0%
!! AAGAAATTACATAATATACA+AGG - chr3_2:57328004-57328023 None:intergenic 15.0%
!! TTTATAATTAGGAGTAAAAA+TGG + chr3_2:57328215-57328234 Msa0413110:three_prime_UTR 15.0%
!! AGAATATTCTGAATGATAAT+GGG + chr3_2:57320865-57320884 Msa0413110:five_prime_UTR 20.0%
!! AGTAAACTTTATTATTGCAA+TGG - chr3_2:57321802-57321821 None:intergenic 20.0%
!! GAAAAATGAAATCCAATTAT+CGG - chr3_2:57323007-57323026 None:intergenic 20.0%
!! AATGACATATACAGAAATAT+TGG - chr3_2:57323438-57323457 None:intergenic 20.0%
!!! TAATAGTAAAAGTGGATTAT+TGG + chr3_2:57323698-57323717 Msa0413110:CDS 20.0%
!! AGCCTATAACAAAATATAAA+AGG - chr3_2:57323889-57323908 None:intergenic 20.0%
!! TATATGAATTCATGATCAAA+AGG + chr3_2:57324351-57324370 Msa0413110:intron 20.0%
!! TTATCATGAACATATAACAA+AGG - chr3_2:57325236-57325255 None:intergenic 20.0%
!!! TTTGTTATATGTTCATGATA+AGG + chr3_2:57325235-57325254 Msa0413110:intron 20.0%
!! TTGTTATATGTTCATGATAA+GGG + chr3_2:57325236-57325255 Msa0413110:intron 20.0%
!! GAAACAAAATAACAGAAAAA+AGG - chr3_2:57325433-57325452 None:intergenic 20.0%
!!! AACAGATTTTGTTTGTTTAT+TGG + chr3_2:57325454-57325473 Msa0413110:intron 20.0%
!!! TTTAAAATAATCGACAAATG+TGG + chr3_2:57325663-57325682 Msa0413110:intron 20.0%
!! ACATTTATACAATTTACCAA+TGG + chr3_2:57325703-57325722 Msa0413110:intron 20.0%
!! AATGAAATAGTTAATCAAGA+CGG - chr3_2:57325991-57326010 None:intergenic 20.0%
!! ATGATGATAAAAATGAAAAG+GGG - chr3_2:57326176-57326195 None:intergenic 20.0%
!! TTAAGATATAAAGTAGGAAT+GGG - chr3_2:57326232-57326251 None:intergenic 20.0%
!! ATTAAGATATAAAGTAGGAA+TGG - chr3_2:57326233-57326252 None:intergenic 20.0%
!! TCTTAATTAATTAGTTCCAA+TGG + chr3_2:57326246-57326265 Msa0413110:intron 20.0%
!! TTGTTATCATTATCATATCA+AGG + chr3_2:57326323-57326342 Msa0413110:intron 20.0%
!!! TTTATTTTATCAAACTTTCC+TGG + chr3_2:57326404-57326423 Msa0413110:intron 20.0%
!! TTTAATCCTTACAAAAATGA+TGG + chr3_2:57326967-57326986 Msa0413110:intron 20.0%
!!! TATTAAATATGTTGATGATG+TGG + chr3_2:57327119-57327138 Msa0413110:intron 20.0%
!!! TAAGTTTTTTTCATCTTTAG+TGG + chr3_2:57327641-57327660 Msa0413110:intron 20.0%
!!! TGATAATTTGATTGGTTTAT+AGG + chr3_2:57328038-57328057 Msa0413110:intron 20.0%
! GAGAATATTCTGAATGATAA+TGG + chr3_2:57320864-57320883 Msa0413110:five_prime_UTR 25.0%
! AGGTGAATTATTATCTGAAA+AGG + chr3_2:57321427-57321446 Msa0413110:CDS 25.0%
!!! GAAACTTCATTTTGAAACTT+AGG - chr3_2:57321503-57321522 None:intergenic 25.0%
!!! TTCATTTTTCTCAGAATTGA+TGG - chr3_2:57321552-57321571 None:intergenic 25.0%
!! ATTTAAAGTCAAATTGTTCG+TGG + chr3_2:57321588-57321607 Msa0413110:CDS 25.0%
!! TTTAAAGTCAAATTGTTCGT+GGG + chr3_2:57321589-57321608 Msa0413110:CDS 25.0%
! TTAAAGGTTTATGATGTGAA+AGG - chr3_2:57322498-57322517 None:intergenic 25.0%
!!! GGATTTCATTTTTCATGTAT+AGG + chr3_2:57323013-57323032 Msa0413110:intron 25.0%
!! GAACTTGATAATAGTAAAAG+TGG + chr3_2:57323690-57323709 Msa0413110:CDS 25.0%
! TATCCATCAAAATATGTTCA+TGG + chr3_2:57323848-57323867 Msa0413110:intron 25.0%
! AAATCGCTCAATTAAAACAA+CGG - chr3_2:57325159-57325178 None:intergenic 25.0%
!! ACATGTCAGCATTTAATTTA+TGG + chr3_2:57324056-57324075 Msa0413110:intron 25.0%
!!! AAATTTTGGGAATTAAACAG+AGG + chr3_2:57324119-57324138 Msa0413110:intron 25.0%
! ACTATATCTTGTCATTGAAA+TGG - chr3_2:57324193-57324212 None:intergenic 25.0%
! ACTTCATTTATGAACTCATT+TGG - chr3_2:57324250-57324269 None:intergenic 25.0%
! TATAAAGGGTAAAGGAATTT+GGG - chr3_2:57324559-57324578 None:intergenic 25.0%
! TTATAAAGGGTAAAGGAATT+TGG - chr3_2:57324560-57324579 None:intergenic 25.0%
! AAACAGCCACAAATTATAAA+GGG - chr3_2:57324573-57324592 None:intergenic 25.0%
! TAAACAGCCACAAATTATAA+AGG - chr3_2:57324574-57324593 None:intergenic 25.0%
!!! ACATGATTTGTTCAAAATCA+AGG + chr3_2:57324836-57324855 Msa0413110:intron 25.0%
!!! AAATTTTGGGAATTAAACAG+AGG - chr3_2:57324119-57324138 None:intergenic 25.0%
! AAATCGCTCAATTAAAACAA+TGG + chr3_2:57325159-57325178 Msa0413110:intron 25.0%
! AATCGCTCAATTAAAACAAT+GGG + chr3_2:57325160-57325179 Msa0413110:intron 25.0%
! TGTTATATGTTCATGATAAG+GGG + chr3_2:57325237-57325256 Msa0413110:intron 25.0%
! GGTTGCAATTTCAAAATATA+TGG - chr3_2:57325507-57325526 None:intergenic 25.0%
!!! GAAATTTTCATAGTTCTGAT+AGG + chr3_2:57325575-57325594 Msa0413110:intron 25.0%
! CTGTCTTTAAATAATTGACA+GGG + chr3_2:57325632-57325651 Msa0413110:intron 25.0%
! TATTGTTATCATGAAGAAGT+AGG + chr3_2:57325902-57325921 Msa0413110:intron 25.0%
! CAAAATCATAGAATACAGTT+CGG - chr3_2:57326306-57326325 None:intergenic 25.0%
! AATTGTGATCTTTCAAAGTT+TGG - chr3_2:57326627-57326646 None:intergenic 25.0%
!! GAATATTTGCTAAAAACTTC+TGG - chr3_2:57326692-57326711 None:intergenic 25.0%
! TATGTAATTTGATTGCCTAT+TGG + chr3_2:57326740-57326759 Msa0413110:intron 25.0%
!! GTAATGAAAGTTAATTTTCC+TGG + chr3_2:57327166-57327185 Msa0413110:intron 25.0%
!!! TATCTTATAAAAGAAGTACC+AGG - chr3_2:57327187-57327206 None:intergenic 25.0%
!!! GCATATATCTATTTCTGTTA+TGG + chr3_2:57327305-57327324 Msa0413110:intron 25.0%
! CTGACATGAATAATGATTTA+TGG + chr3_2:57327542-57327561 Msa0413110:intron 25.0%
!!! TAATTTGATTGGTTTATAGG+CGG + chr3_2:57328041-57328060 Msa0413110:intron 25.0%
! AAAGTATATATGTGCATAAG+TGG + chr3_2:57328338-57328357 Msa0413110:three_prime_UTR 25.0%
! AAGTATATATGTGCATAAGT+GGG + chr3_2:57328339-57328358 Msa0413110:three_prime_UTR 25.0%
!! TATTCTGAATGATAATGGGT+TGG + chr3_2:57320869-57320888 Msa0413110:five_prime_UTR 30.0%
!! ATTCTGAATGATAATGGGTT+GGG + chr3_2:57320870-57320889 Msa0413110:five_prime_UTR 30.0%
GAGAAATGTGATCTTAAGTA+TGG + chr3_2:57320996-57321015 Msa0413110:five_prime_UTR 30.0%
!!! GTTGCTTTTTGAATTGATTG+AGG + chr3_2:57321208-57321227 Msa0413110:CDS 30.0%
! TACAGTAAAGGAAGTTTTCT+CGG + chr3_2:57321379-57321398 Msa0413110:CDS 30.0%
CAAAATGAAGTTTCATGCAA+CGG + chr3_2:57321509-57321528 Msa0413110:CDS 30.0%
! CATCTTTGAAGGAAAAAGTA+TGG + chr3_2:57321696-57321715 Msa0413110:CDS 30.0%
! TTATTGCAATGGATTCCATT+GGG - chr3_2:57321791-57321810 None:intergenic 30.0%
! ATTATTGCAATGGATTCCAT+TGG - chr3_2:57321792-57321811 None:intergenic 30.0%
! CCTTATATCAAGACCATTTT+CGG - chr3_2:57321876-57321895 None:intergenic 30.0%
ACACCTCTTCTTCTATTATT+TGG - chr3_2:57322154-57322173 None:intergenic 30.0%
ATTCAGAAATCGACTATTTC+TGG + chr3_2:57322247-57322266 Msa0413110:CDS 30.0%
! TGAATGGTCAAGGTATTTAA+AGG - chr3_2:57322280-57322299 None:intergenic 30.0%
! ATCAACATTTTCCTCATGAA+TGG - chr3_2:57322296-57322315 None:intergenic 30.0%
CGAATAAATCAAGTGCAAAT+CGG + chr3_2:57322359-57322378 Msa0413110:CDS 30.0%
AACCTTTAAATGTTCTGTCT+TGG + chr3_2:57322509-57322528 Msa0413110:CDS 30.0%
AACCAAGACAGAACATTTAA+AGG - chr3_2:57322514-57322533 None:intergenic 30.0%
GATCTTGCATTATTTGTATC+TGG - chr3_2:57322759-57322778 None:intergenic 30.0%
ATGAAAGCGGATATATGTAT+CGG - chr3_2:57323168-57323187 None:intergenic 30.0%
TTGATTCAGCAATATGAAAG+CGG - chr3_2:57323181-57323200 None:intergenic 30.0%
AATCAAAAGATGTCCAAGTA+CGG - chr3_2:57323219-57323238 None:intergenic 30.0%
TGGCTAAACTCAATAAACAA+GGG - chr3_2:57323418-57323437 None:intergenic 30.0%
TTGGCTAAACTCAATAAACA+AGG - chr3_2:57323419-57323438 None:intergenic 30.0%
!! AAAATGTTTTATTCAGCCGA+TGG + chr3_2:57323814-57323833 Msa0413110:CDS 30.0%
!! ACACCATGAACATATTTTGA+TGG - chr3_2:57323854-57323873 None:intergenic 30.0%
AATCGCTCAATTAAAACAAC+GGG - chr3_2:57323959-57323978 None:intergenic 30.0%
ATATCTTGTCATTGAAATGG+AGG - chr3_2:57324190-57324209 None:intergenic 30.0%
GACAAGATATAGTTGTGAAA+AGG + chr3_2:57324200-57324219 Msa0413110:intron 30.0%
GTAGTTTCACAATGTTTGTA+AGG - chr3_2:57324295-57324314 None:intergenic 30.0%
ACAAACATTGTGAAACTACT+TGG + chr3_2:57324296-57324315 Msa0413110:intron 30.0%
TGATCATGAATTCATATACC+AGG - chr3_2:57324349-57324368 None:intergenic 30.0%
GAAAATGTGATGCATATAGT+TGG - chr3_2:57324393-57324412 None:intergenic 30.0%
CCACAAATTATAAAGGGTAA+AGG - chr3_2:57324567-57324586 None:intergenic 30.0%
CCTTTACCCTTTATAATTTG+TGG + chr3_2:57324564-57324583 Msa0413110:intron 30.0%
! GATTTGTTCAAAATCAAGGA+AGG + chr3_2:57324840-57324859 Msa0413110:intron 30.0%
AGAAAAGATGAGAGATAACA+GGG + chr3_2:57324868-57324887 Msa0413110:intron 30.0%
GATAGCAATTAGGAAGAAAA+TGG + chr3_2:57324926-57324945 Msa0413110:intron 30.0%
! ACGTGTCAGCATTTAATTTA+TGG - chr3_2:57325063-57325082 None:intergenic 30.0%
ATCGCTCAATTAAAACAATG+GGG + chr3_2:57325161-57325180 Msa0413110:intron 30.0%
AACCTCTTGTGTAAAAAACA+GGG + chr3_2:57325326-57325345 Msa0413110:intron 30.0%
ATAGCAGATATGATATCATC+AGG - chr3_2:57325528-57325547 None:intergenic 30.0%
CCTGTCAATTATTTAAAGAC+AGG - chr3_2:57325634-57325653 None:intergenic 30.0%
CCTGTCTTTAAATAATTGAC+AGG + chr3_2:57325631-57325650 Msa0413110:intron 30.0%
AAAGACAGCTATAAATCCAT+TGG - chr3_2:57325722-57325741 None:intergenic 30.0%
AGTTCATAAACACAGATATC+AGG - chr3_2:57325782-57325801 None:intergenic 30.0%
! TCTGTGTTTATGAACTTTTC+AGG + chr3_2:57325786-57325805 Msa0413110:intron 30.0%
! GTTTTTAATGCCTTCTGTAA+TGG + chr3_2:57325965-57325984 Msa0413110:intron 30.0%
! TCGCATATTAATGGATGAAT+TGG + chr3_2:57326091-57326110 Msa0413110:CDS 30.0%
! ATTAATGGATGAATTGGAGA+AGG + chr3_2:57326097-57326116 Msa0413110:CDS 30.0%
TGATTGCAATCTTGAGATTA+TGG + chr3_2:57326269-57326288 Msa0413110:intron 30.0%
ATCATATCAAGGTTGACTAA+TGG + chr3_2:57326334-57326353 Msa0413110:intron 30.0%
!!! AATTTTTTCCTGGCTTTCAA+TGG + chr3_2:57326449-57326468 Msa0413110:intron 30.0%
AGTGTATATTAGTGAGAAAG+TGG - chr3_2:57326487-57326506 None:intergenic 30.0%
! CTATACTTTCCTAGATTTTC+CGG + chr3_2:57326653-57326672 Msa0413110:CDS 30.0%
! TATACTTTCCTAGATTTTCC+GGG + chr3_2:57326654-57326673 Msa0413110:CDS 30.0%
AAATATTCCCTCTCCAAATT+CGG + chr3_2:57326704-57326723 Msa0413110:CDS 30.0%
CAATCAAATTACATACCAGT+TGG - chr3_2:57326735-57326754 None:intergenic 30.0%
TGTAAGGATTAAATAGACAG+AGG - chr3_2:57326960-57326979 None:intergenic 30.0%
!! TTAACGCCATCATTTTTGTA+AGG - chr3_2:57326976-57326995 None:intergenic 30.0%
AATAACAATACGACTGTACA+GGG - chr3_2:57327103-57327122 None:intergenic 30.0%
TAATAACAATACGACTGTAC+AGG - chr3_2:57327104-57327123 None:intergenic 30.0%
AAGTGTCTGTTATGTATCAA+TGG + chr3_2:57327427-57327446 Msa0413110:intron 30.0%
AGTGTCTGTTATGTATCAAT+GGG + chr3_2:57327428-57327447 Msa0413110:intron 30.0%
GTCATTGCTGAAAGTAAAAA+TGG + chr3_2:57327454-57327473 Msa0413110:intron 30.0%
TGCTGAAAGTAAAAATGGAA+AGG + chr3_2:57327459-57327478 Msa0413110:intron 30.0%
! ATGTCAGCACTTTTATTAGA+TGG - chr3_2:57327529-57327548 None:intergenic 30.0%
! TACATTGCTTAGACGATTTT+TGG + chr3_2:57327675-57327694 Msa0413110:intron 30.0%
!! AGAAGTACTGCAAAAATATC+AGG - chr3_2:57327729-57327748 None:intergenic 30.0%
!! TATTTTTGCAGTACTTCTGA+AGG + chr3_2:57327731-57327750 Msa0413110:intron 30.0%
GTTGAGACTGATAATTTGAT+TGG + chr3_2:57328030-57328049 Msa0413110:intron 30.0%
!!! ATTTTTGAGTGGTTTCATTC+TGG - chr3_2:57328098-57328117 None:intergenic 30.0%
GAAGCGTAGGATTTATAATT+AGG + chr3_2:57328204-57328223 Msa0413110:exon 30.0%
! GAAACACAAGATTTTGTTGA+AGG + chr3_2:57328237-57328256 Msa0413110:three_prime_UTR 30.0%
AAAGAAAGAAGCTATAACTG+TGG - chr3_2:57328297-57328316 None:intergenic 30.0%
!! TCTTTTTGTTTGTGTTTCCT+TGG + chr3_2:57328312-57328331 Msa0413110:three_prime_UTR 30.0%
CACATATATACTTTGTACCA+AGG - chr3_2:57328332-57328351 None:intergenic 30.0%
!!! TAATGGGTTGGGTAATTTTG+TGG + chr3_2:57320881-57320900 Msa0413110:five_prime_UTR 35.0%
!! AGTGAGTGTTTCAAGTGTTT+TGG + chr3_2:57320908-57320927 Msa0413110:five_prime_UTR 35.0%
!! AGTGTTTCAAGTGTTTTGGA+TGG + chr3_2:57320912-57320931 Msa0413110:five_prime_UTR 35.0%
!! AGTGTTTTGGATGGTGATAT+CGG + chr3_2:57320921-57320940 Msa0413110:five_prime_UTR 35.0%
CATTTCTCAAACTCAACCAA+AGG - chr3_2:57320984-57321003 None:intergenic 35.0%
! GTGTGTTGATGTAAATTACC+AGG + chr3_2:57321022-57321041 Msa0413110:five_prime_UTR 35.0%
ATGTAAATTACCAGGAAGCT+TGG + chr3_2:57321030-57321049 Msa0413110:five_prime_UTR 35.0%
GTTGTGAATGATAAGTGTGA+TGG + chr3_2:57321062-57321081 Msa0413110:five_prime_UTR 35.0%
! GAATGATAAGTGTGATGGAA+TGG + chr3_2:57321067-57321086 Msa0413110:exon 35.0%
! ACTGTGTTTTTCCCTGATTT+GGG + chr3_2:57321098-57321117 Msa0413110:CDS 35.0%
TCATTTCATCACCCAAATCA+GGG - chr3_2:57321112-57321131 None:intergenic 35.0%
TTCATTTCATCACCCAAATC+AGG - chr3_2:57321113-57321132 None:intergenic 35.0%
! TGATTTGGGTGATGAAATGA+AGG + chr3_2:57321112-57321131 Msa0413110:CDS 35.0%
GTATGATGTGCGACAAAAAA+AGG + chr3_2:57321265-57321284 Msa0413110:CDS 35.0%
AAAAAGGAATTTGCCGTGAT+TGG + chr3_2:57321281-57321300 Msa0413110:CDS 35.0%
ATGGACATTGAATGAGAAGA+AGG + chr3_2:57321307-57321326 Msa0413110:CDS 35.0%
TGAATGAGAAGAAGGATTTG+TGG + chr3_2:57321315-57321334 Msa0413110:CDS 35.0%
TTTGTGGAGACACTTGATAA+TGG + chr3_2:57321331-57321350 Msa0413110:CDS 35.0%
ACATATTGCTTAACAGCATC+GGG - chr3_2:57321647-57321666 None:intergenic 35.0%
CACATATTGCTTAACAGCAT+CGG - chr3_2:57321648-57321667 None:intergenic 35.0%
TGGAAACATCTTGCATATCT+TGG + chr3_2:57321716-57321735 Msa0413110:CDS 35.0%
AACATCTTGCATATCTTGGA+TGG + chr3_2:57321720-57321739 Msa0413110:CDS 35.0%
ACATCTTGCATATCTTGGAT+GGG + chr3_2:57321721-57321740 Msa0413110:CDS 35.0%
ACCTGGGTAGTAAAAAATAC+AGG + chr3_2:57321756-57321775 Msa0413110:CDS 35.0%
!!! ACCTGTATTTTTTACTACCC+AGG - chr3_2:57321760-57321779 None:intergenic 35.0%
! ATATCAAGACCATTTTCGGA+CGG - chr3_2:57321872-57321891 None:intergenic 35.0%
! CCGAAAATGGTCTTGATATA+AGG + chr3_2:57321873-57321892 Msa0413110:CDS 35.0%
!!! ATCTTTTCAGATGGACTAAG+AGG - chr3_2:57321932-57321951 None:intergenic 35.0%
ATGTTTGTGGTATTCCACAA+TGG - chr3_2:57322032-57322051 None:intergenic 35.0%
CTTCTTCTATTATTTGGAGG+TGG - chr3_2:57322148-57322167 None:intergenic 35.0%
CCTCTTCTTCTATTATTTGG+AGG - chr3_2:57322151-57322170 None:intergenic 35.0%
CCTCCAAATAATAGAAGAAG+AGG + chr3_2:57322148-57322167 Msa0413110:CDS 35.0%
GAGAAGAATTTCTGTTTCAG+TGG - chr3_2:57322190-57322209 None:intergenic 35.0%
AAATACCTTGACCATTCATG+AGG + chr3_2:57322282-57322301 Msa0413110:CDS 35.0%
! ATTTTCCTCATGAATGGTCA+AGG - chr3_2:57322290-57322309 None:intergenic 35.0%
TCATGAGGAAAATGTTGATC+AGG + chr3_2:57322297-57322316 Msa0413110:CDS 35.0%
! TTAGAGTTGATTCATCGCTT+CGG - chr3_2:57322429-57322448 None:intergenic 35.0%
AAGCGATGAATCAACTCTAA+GGG + chr3_2:57322429-57322448 Msa0413110:CDS 35.0%
! GGTACTGAGATCAAATGAAA+GGG + chr3_2:57322450-57322469 Msa0413110:CDS 35.0%
TTTATGATGTGAAAGGCAAG+AGG - chr3_2:57322491-57322510 None:intergenic 35.0%
!!! TTTTTTGTCGAGCAAAACGT+GGG + chr3_2:57322569-57322588 Msa0413110:CDS 35.0%
AATGCAAGATCACAAGTCTA+AGG + chr3_2:57322768-57322787 Msa0413110:CDS 35.0%
CACGTCTTATGATATGAAGA+CGG - chr3_2:57322895-57322914 None:intergenic 35.0%
TCATATCATAAGACGTGTCT+TGG + chr3_2:57322898-57322917 Msa0413110:CDS 35.0%
! TATTCTTCTGCACCGATAAT+TGG + chr3_2:57322992-57323011 Msa0413110:intron 35.0%
TGTAGCCAAAGCAAATTCAA+CGG + chr3_2:57323083-57323102 Msa0413110:CDS 35.0%
!! TACTGGTATCTCTACTTTTC+AGG - chr3_2:57323329-57323348 None:intergenic 35.0%
AGTAGAGATACCAGTAAATC+CGG + chr3_2:57323333-57323352 Msa0413110:CDS 35.0%
GGCTAAACTCAATAAACAAG+GGG - chr3_2:57323417-57323436 None:intergenic 35.0%
CGACATTGCATGTTATAACT+TGG + chr3_2:57323518-57323537 Msa0413110:intron 35.0%
GGATATGAAACTCTTACCAT+CGG - chr3_2:57323833-57323852 None:intergenic 35.0%
ACAATTGGCAAAATATAGGG+GGG - chr3_2:57325195-57325214 None:intergenic 35.0%
CACAATTGGCAAAATATAGG+GGG - chr3_2:57325194-57325213 None:intergenic 35.0%
GCACAATTGGCAAAATATAG+GGG - chr3_2:57325193-57325212 None:intergenic 35.0%
CGCACAATTGGCAAAATATA+GGG - chr3_2:57325192-57325211 None:intergenic 35.0%
TCGCACAATTGGCAAAATAT+AGG - chr3_2:57325191-57325210 None:intergenic 35.0%
ATCGCTCAATTAAAACAACG+GGG - chr3_2:57323958-57323977 None:intergenic 35.0%
ATCATCACTAAAACACCCAA+GGG - chr3_2:57325099-57325118 None:intergenic 35.0%
TGCTGACATGTCATCAAAAA+CGG - chr3_2:57324047-57324066 None:intergenic 35.0%
AAGAATGGGGAAATTAAGGA+AGG - chr3_2:57324158-57324177 None:intergenic 35.0%
TCGAAAGAATGGGGAAATTA+AGG - chr3_2:57324162-57324181 None:intergenic 35.0%
AAAAGGCTTTGCAATACTTC+AGG + chr3_2:57324217-57324236 Msa0413110:intron 35.0%
!! CACATTTTCTGATTGATGAC+AGG + chr3_2:57324404-57324423 Msa0413110:intron 35.0%
! CTCAAAGCACTTGTATATCT+AGG + chr3_2:57324630-57324649 Msa0413110:intron 35.0%
ACATTTGCATACTTCCTCTT+TGG + chr3_2:57324667-57324686 Msa0413110:intron 35.0%
CCAAATAAAAAGAGCCAAAG+AGG - chr3_2:57324684-57324703 None:intergenic 35.0%
!!! CCTCTTTGGCTCTTTTTATT+TGG + chr3_2:57324681-57324700 Msa0413110:intron 35.0%
TGTTCAAAATCAAGGAAGGA+TGG + chr3_2:57324844-57324863 Msa0413110:intron 35.0%
GTTCAAAATCAAGGAAGGAT+GGG + chr3_2:57324845-57324864 Msa0413110:intron 35.0%
GAGAAAAGATGAGAGATAAC+AGG + chr3_2:57324867-57324886 Msa0413110:intron 35.0%
AGCAATTAGGAAGAAAATGG+AGG + chr3_2:57324929-57324948 Msa0413110:intron 35.0%
AATTAGGAAGAAAATGGAGG+AGG + chr3_2:57324932-57324951 Msa0413110:intron 35.0%
ATCATCACTAAAACACCCAA+GGG + chr3_2:57325099-57325118 Msa0413110:intron 35.0%
TCGCACAATTGGCAAAATAT+AGG + chr3_2:57325191-57325210 Msa0413110:intron 35.0%
CGCACAATTGGCAAAATATA+GGG + chr3_2:57325192-57325211 Msa0413110:intron 35.0%
GCACAATTGGCAAAATATAG+GGG + chr3_2:57325193-57325212 Msa0413110:intron 35.0%
CAACCTCTTGTGTAAAAAAC+AGG + chr3_2:57325325-57325344 Msa0413110:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - chr3_2:57325331-57325350 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr3_2:57325331-57325350 Msa0413110:intron 35.0%
GTACAATACACCAAAATGGT+GGG + chr3_2:57325358-57325377 Msa0413110:intron 35.0%
! ATCGACAAATGTGGAAGTTT+TGG + chr3_2:57325672-57325691 Msa0413110:intron 35.0%
! TCGACAAATGTGGAAGTTTT+GGG + chr3_2:57325673-57325692 Msa0413110:intron 35.0%
TTCATTTCTCTCCAGAAGTA+CGG - chr3_2:57325849-57325868 None:intergenic 35.0%
!! TTCATTTTTCTTAGGGTCCT+TGG + chr3_2:57326005-57326024 Msa0413110:intron 35.0%
TGGAATGTGTCGCATATTAA+TGG + chr3_2:57326082-57326101 Msa0413110:CDS 35.0%
TTGGAGAAGGTAAATAAACG+AGG + chr3_2:57326110-57326129 Msa0413110:intron 35.0%
ATGAGGGATCAAGACAAAAA+GGG - chr3_2:57326146-57326165 None:intergenic 35.0%
TATGAGGGATCAAGACAAAA+AGG - chr3_2:57326147-57326166 None:intergenic 35.0%
!!! CTTCCTTGTCAATTTTTTCC+TGG + chr3_2:57326439-57326458 Msa0413110:intron 35.0%
AAGCCAGGAAAAAATTGACA+AGG - chr3_2:57326445-57326464 None:intergenic 35.0%
AAAAAGAACCATTGAAAGCC+AGG - chr3_2:57326460-57326479 None:intergenic 35.0%
TAAAAACTTCTGGCACATGA+TGG - chr3_2:57326682-57326701 None:intergenic 35.0%
AGTTGTAAATGCAATCACCT+TGG - chr3_2:57326784-57326803 None:intergenic 35.0%
!!! AGATAGCATCTTGTTTTCGT+TGG - chr3_2:57326830-57326849 None:intergenic 35.0%
! TTTTGTCTATCTCTTCTGCT+TGG - chr3_2:57326899-57326918 None:intergenic 35.0%
GATAGACAAAAGAGAATCGT+TGG + chr3_2:57326908-57326927 Msa0413110:CDS 35.0%
ATCGTTGGATCAACAAATGA+TGG + chr3_2:57326923-57326942 Msa0413110:CDS 35.0%
ATAACAATACGACTGTACAG+GGG - chr3_2:57327102-57327121 None:intergenic 35.0%
CTGTGCTGTAAAAAGAATGT+GGG - chr3_2:57327385-57327404 None:intergenic 35.0%
TCTGTGCTGTAAAAAGAATG+TGG - chr3_2:57327386-57327405 None:intergenic 35.0%
TTCCTTCTTGTGATATGTGA+TGG + chr3_2:57327585-57327604 Msa0413110:intron 35.0%
AACCATCACATATCACAAGA+AGG - chr3_2:57327590-57327609 None:intergenic 35.0%
GAAGGCGATAATGATAATCT+TGG + chr3_2:57327749-57327768 Msa0413110:CDS 35.0%
GAGACAAGATGAAAATACCA+TGG - chr3_2:57327798-57327817 None:intergenic 35.0%
TTTCATTCTGGCAATGTTGT+TGG - chr3_2:57328086-57328105 None:intergenic 35.0%
!! TTCATTCTGGCATTTTTGAG+TGG - chr3_2:57328109-57328128 None:intergenic 35.0%
!! ACTTTTGAGTGGTTTCATTC+TGG - chr3_2:57328122-57328141 None:intergenic 35.0%
!! AAAAGTGCTCTCTTGTAAAG+TGG + chr3_2:57328136-57328155 Msa0413110:CDS 35.0%
TTTGTTGAAGGAGAATGAAG+TGG + chr3_2:57328249-57328268 Msa0413110:three_prime_UTR 35.0%
!! GTGTTTTGGATGGTGATATC+GGG + chr3_2:57320922-57320941 Msa0413110:five_prime_UTR 40.0%
TTCTCAAACTCAACCAAAGG+AGG - chr3_2:57320981-57321000 None:intergenic 40.0%
TAAATTACCAGGAAGCTTGG+TGG + chr3_2:57321033-57321052 Msa0413110:five_prime_UTR 40.0%
AAATTACCAGGAAGCTTGGT+GGG + chr3_2:57321034-57321053 Msa0413110:five_prime_UTR 40.0%
! TGATAAGTGTGATGGAATGG+AGG + chr3_2:57321070-57321089 Msa0413110:exon 40.0%
! GACTGTGTTTTTCCCTGATT+TGG + chr3_2:57321097-57321116 Msa0413110:CDS 40.0%
TTGGGTGATGAAATGAAGGT+CGG + chr3_2:57321116-57321135 Msa0413110:CDS 40.0%
TGAAATGAAGGTCGGAATTC+AGG + chr3_2:57321124-57321143 Msa0413110:CDS 40.0%
! AAATGCGGATTACTCAGGAT+TGG + chr3_2:57321147-57321166 Msa0413110:CDS 40.0%
! AATGCGGATTACTCAGGATT+GGG + chr3_2:57321148-57321167 Msa0413110:CDS 40.0%
TCAGGATTGGGATGAAGTTA+CGG + chr3_2:57321160-57321179 Msa0413110:CDS 40.0%
GATTGAGGAGTTGTATCTTC+CGG + chr3_2:57321223-57321242 Msa0413110:CDS 40.0%
CAAATTTGCCTTACCGATAC+CGG - chr3_2:57321245-57321264 None:intergenic 40.0%
AATTTGCCGTGATTGGTGAA+TGG + chr3_2:57321288-57321307 Msa0413110:CDS 40.0%
CAATGTCCATTCACCAATCA+CGG - chr3_2:57321297-57321316 None:intergenic 40.0%
!! CACTTGATAATGGAGGTAGT+TGG + chr3_2:57321341-57321360 Msa0413110:CDS 40.0%
CTACTTGGCTGTTACAGTAA+AGG + chr3_2:57321367-57321386 Msa0413110:CDS 40.0%
AATTCACCTGATTCCATCTC+CGG - chr3_2:57321416-57321435 None:intergenic 40.0%
ATGGGAAATTGACATTGACC+TGG + chr3_2:57321739-57321758 Msa0413110:CDS 40.0%
TGGGAAATTGACATTGACCT+GGG + chr3_2:57321740-57321759 Msa0413110:CDS 40.0%
! ATTTGGAACATGACAGTCAC+CGG - chr3_2:57321906-57321925 None:intergenic 40.0%
!!! CGGTTCTGAATCTTTTCAGA+TGG - chr3_2:57321941-57321960 None:intergenic 40.0%
TCACAACTAGAGGAGATACT+CGG - chr3_2:57321961-57321980 None:intergenic 40.0%
TTATTGTCCTCAAGCCATTG+TGG + chr3_2:57322015-57322034 Msa0413110:CDS 40.0%
TCTTCTTGAGTGCATGTTTG+TGG - chr3_2:57322045-57322064 None:intergenic 40.0%
CGAAATCATCTGAAAGCAGA+AGG + chr3_2:57322106-57322125 Msa0413110:CDS 40.0%
ATCATCTGAAAGCAGAAGGA+TGG + chr3_2:57322110-57322129 Msa0413110:CDS 40.0%
AAACGCTTGAGGAATTCAGA+TGG + chr3_2:57322388-57322407 Msa0413110:CDS 40.0%
GAAGCGATGAATCAACTCTA+AGG + chr3_2:57322428-57322447 Msa0413110:CDS 40.0%
!! GGGTACTGAGATCAAATGAA+AGG + chr3_2:57322449-57322468 Msa0413110:CDS 40.0%
!! ATCAAATGAAAGGGTGCCAA+AGG + chr3_2:57322459-57322478 Msa0413110:CDS 40.0%
ACAGCAACATGTTGTTACCA+AGG + chr3_2:57322539-57322558 Msa0413110:CDS 40.0%
CATGTTGTTACCAAGGTCTA+AGG + chr3_2:57322546-57322565 Msa0413110:CDS 40.0%
CGACAAAAAACCTTAGACCT+TGG - chr3_2:57322559-57322578 None:intergenic 40.0%
!!! GTTTTTTGTCGAGCAAAACG+TGG + chr3_2:57322568-57322587 Msa0413110:CDS 40.0%
TCCTTCGAATTTCATGCTAC+TGG + chr3_2:57322670-57322689 Msa0413110:CDS 40.0%
ACCAAGTGCCAATATCTTTC+TGG + chr3_2:57322708-57322727 Msa0413110:CDS 40.0%
AGATAAGAGCGATCTACCAT+CGG - chr3_2:57322734-57322753 None:intergenic 40.0%
GACAAAACCATTCACCATCA+GGG - chr3_2:57323043-57323062 None:intergenic 40.0%
GTAGCCAAAGCAAATTCAAC+GGG + chr3_2:57323084-57323103 Msa0413110:CDS 40.0%
TAGCCAAAGCAAATTCAACG+GGG + chr3_2:57323085-57323104 Msa0413110:CDS 40.0%
GTTCACACTGAATGCATGTA+AGG - chr3_2:57323130-57323149 None:intergenic 40.0%
CATACTGTACTTACCGTACT+TGG + chr3_2:57323203-57323222 Msa0413110:intron 40.0%
CACGCAACATGATCTACATT+AGG - chr3_2:57323306-57323325 None:intergenic 40.0%
CACATAACTTCCGGATTTAC+TGG - chr3_2:57323346-57323365 None:intergenic 40.0%
CAGTAAATCCGGAAGTTATG+TGG + chr3_2:57323344-57323363 Msa0413110:CDS 40.0%
!! ACGAGCATTGAGACTTGATT+TGG + chr3_2:57323494-57323513 Msa0413110:intron 40.0%
!! CGAGCATTGAGACTTGATTT+GGG + chr3_2:57323495-57323514 Msa0413110:intron 40.0%
CTGTCCTAACAGACTTTGAA+GGG - chr3_2:57323604-57323623 None:intergenic 40.0%
AAGTTCACAACTCTCAGAGT+CGG - chr3_2:57323676-57323695 None:intergenic 40.0%
CAAGAAGAGGATTCCTTTAG+GGG - chr3_2:57323780-57323799 None:intergenic 40.0%
GCAAGAAGAGGATTCCTTTA+GGG - chr3_2:57323781-57323800 None:intergenic 40.0%
TGCAAGAAGAGGATTCCTTT+AGG - chr3_2:57323782-57323801 None:intergenic 40.0%
AGAAAGGGGGAAAATGATAG+GGG - chr3_2:57325133-57325152 None:intergenic 40.0%
CAGAAAGGGGGAAAATGATA+GGG - chr3_2:57325132-57325151 None:intergenic 40.0%
TCATCACTAAAACACCCAAG+GGG - chr3_2:57325100-57325119 None:intergenic 40.0%
CATCATCACTAAAACACCCA+AGG - chr3_2:57325098-57325117 None:intergenic 40.0%
TCTTGTCATTGAAATGGAGG+AGG - chr3_2:57324187-57324206 None:intergenic 40.0%
AAGATGAGAGATAACAGGGT+AGG + chr3_2:57324872-57324891 Msa0413110:intron 40.0%
TAGGAGAAAGCGAGCAATTA+GGG + chr3_2:57324891-57324910 Msa0413110:intron 40.0%
ATCGAAGGAATGGGGAAATT+AGG + chr3_2:57324956-57324975 Msa0413110:intron 40.0%
TCGAAGGAATGGGGAAATTA+GGG + chr3_2:57324957-57324976 Msa0413110:intron 40.0%
TGCTGACACGTCATCAAAAA+CGG + chr3_2:57325072-57325091 Msa0413110:intron 40.0%
CATCATCACTAAAACACCCA+AGG + chr3_2:57325098-57325117 Msa0413110:intron 40.0%
TCATCACTAAAACACCCAAG+GGG + chr3_2:57325100-57325119 Msa0413110:intron 40.0%
CAGAAAGGGGGAAAATGATA+GGG + chr3_2:57325132-57325151 Msa0413110:intron 40.0%
AGAAAGGGGGAAAATGATAG+GGG + chr3_2:57325133-57325152 Msa0413110:intron 40.0%
CTGCGTACAATACACCAAAA+TGG + chr3_2:57325354-57325373 Msa0413110:intron 40.0%
CGTACAATACACCAAAATGG+TGG + chr3_2:57325357-57325376 Msa0413110:intron 40.0%
GGTTATGAACTATGATCAGC+AGG - chr3_2:57325486-57325505 None:intergenic 40.0%
CGAACATCTTAGCAAAACTG+AGG - chr3_2:57325551-57325570 None:intergenic 40.0%
TCTGGAGAGAAATGAAGATC+TGG + chr3_2:57325853-57325872 Msa0413110:CDS 40.0%
TGGTCAGTGTAGCAACTATT+AGG + chr3_2:57325873-57325892 Msa0413110:CDS 40.0%
TGAAATCTGGTACCAACAAG+AGG - chr3_2:57326050-57326069 None:intergenic 40.0%
ATGACGACGATACTGAAATC+TGG - chr3_2:57326063-57326082 None:intergenic 40.0%
AGATTTCAGTATCGTCGTCA+TGG + chr3_2:57326062-57326081 Msa0413110:CDS 40.0%
CTCAAGATTGCAATCACCAT+TGG - chr3_2:57326265-57326284 None:intergenic 40.0%
AGGAAGTTGCTAATCAAACC+AGG - chr3_2:57326425-57326444 None:intergenic 40.0%
! CTTTGAAAATCCAAAAGCGC+CGG - chr3_2:57326601-57326620 None:intergenic 40.0%
TAAATGCAATCACCTTGGCA+AGG - chr3_2:57326779-57326798 None:intergenic 40.0%
CGAAAACAAGATGCTATCTC+CGG + chr3_2:57326831-57326850 Msa0413110:CDS 40.0%
ATTACTAGCACTACTGCTTC+CGG - chr3_2:57326853-57326872 None:intergenic 40.0%
GCTTGGTAAACTTCAGAAAC+TGG - chr3_2:57326882-57326901 None:intergenic 40.0%
TTGTGATAGAGTGACTGCAA+AGG + chr3_2:57327011-57327030 Msa0413110:intron 40.0%
GCAAAGGCGATCTAATATTG+TGG + chr3_2:57327027-57327046 Msa0413110:intron 40.0%
CTAATATTGTGGCCCTGAAA+AGG + chr3_2:57327038-57327057 Msa0413110:intron 40.0%
! TCAAGCGACTTTCCTTTTCA+GGG - chr3_2:57327053-57327072 None:intergenic 40.0%
!! TACAGGGGGGTTCATTTTTA+CGG - chr3_2:57327087-57327106 None:intergenic 40.0%
TAACAATACGACTGTACAGG+GGG - chr3_2:57327101-57327120 None:intergenic 40.0%
GTAAAAAGAATGTGGGATGC+TGG - chr3_2:57327378-57327397 None:intergenic 40.0%
CACTGTGTAGTATAACACGA+TGG - chr3_2:57327820-57327839 None:intergenic 40.0%
AATAACCGCTAATGCTGTTG+TGG + chr3_2:57327894-57327913 Msa0413110:intron 40.0%
!!! TACAAGAGAGCACTTTTGAG+TGG - chr3_2:57328133-57328152 None:intergenic 40.0%
!! TGGGTTGGGTAATTTTGTGG+AGG + chr3_2:57320884-57320903 Msa0413110:five_prime_UTR 45.0%
ATCGGGTCATGGAGTAAACA+TGG + chr3_2:57320939-57320958 Msa0413110:five_prime_UTR 45.0%
TCGGGTCATGGAGTAAACAT+GGG + chr3_2:57320940-57320959 Msa0413110:five_prime_UTR 45.0%
GGAGTAAACATGGGAGGATT+AGG + chr3_2:57320949-57320968 Msa0413110:five_prime_UTR 45.0%
AGGTCGGAATTCAGGAAATG+CGG + chr3_2:57321132-57321151 Msa0413110:CDS 45.0%
! TCAGGAAATGCGGATTACTC+AGG + chr3_2:57321142-57321161 Msa0413110:CDS 45.0%
GGATGAAGTTACGGAGAGAT+GGG + chr3_2:57321169-57321188 Msa0413110:CDS 45.0%
GGAGTTGTATCTTCCGGTAT+CGG + chr3_2:57321229-57321248 Msa0413110:CDS 45.0%
!! TGTATCTTCCGGTATCGGTA+AGG + chr3_2:57321234-57321253 Msa0413110:CDS 45.0%
!! CGGTATCGGTAAGGCAAATT+TGG + chr3_2:57321243-57321262 Msa0413110:CDS 45.0%
!! GTGGAGACACTTGATAATGG+AGG + chr3_2:57321334-57321353 Msa0413110:CDS 45.0%
TTTCTCGGCCTTGAAACTTC+CGG + chr3_2:57321394-57321413 Msa0413110:CDS 45.0%
TTCCATCTCCGGAAGTTTCA+AGG - chr3_2:57321405-57321424 None:intergenic 45.0%
AAACTTCCGGAGATGGAATC+AGG + chr3_2:57321407-57321426 Msa0413110:CDS 45.0%
TGTTGTTCCTCCAGCTGAAA+AGG + chr3_2:57321472-57321491 Msa0413110:CDS 45.0%
! TTAGGCAAGTCCTTTTCAGC+TGG - chr3_2:57321485-57321504 None:intergenic 45.0%
TTCTGACTCCAAGGCAACTA+TGG + chr3_2:57321673-57321692 Msa0413110:CDS 45.0%
CAAAGATGCCATAGTTGCCT+TGG - chr3_2:57321684-57321703 None:intergenic 45.0%
GGCAACTATGGCATCTTTGA+AGG + chr3_2:57321685-57321704 Msa0413110:CDS 45.0%
! TTGCAATGGATTCCATTGGG+TGG - chr3_2:57321788-57321807 None:intergenic 45.0%
AACTCTTCTCCGTCCGAAAA+TGG + chr3_2:57321860-57321879 Msa0413110:CDS 45.0%
! CTTGATATAAGGCATCCTGC+CGG + chr3_2:57321884-57321903 Msa0413110:CDS 45.0%
!! GATGGACTAAGAGGCACATT+TGG - chr3_2:57321923-57321942 None:intergenic 45.0%
GAGTATCTCCTCTAGTTGTG+AGG + chr3_2:57321960-57321979 Msa0413110:CDS 45.0%
TGGTATTCCACAATGGCTTG+AGG - chr3_2:57322025-57322044 None:intergenic 45.0%
CACTCAAGAAGACCTGCAAT+CGG + chr3_2:57322053-57322072 Msa0413110:CDS 45.0%
ACTCAAGAAGACCTGCAATC+GGG + chr3_2:57322054-57322073 Msa0413110:CDS 45.0%
! CCTTTTATATGCCCGATTGC+AGG - chr3_2:57322068-57322087 None:intergenic 45.0%
CCTGCAATCGGGCATATAAA+AGG + chr3_2:57322065-57322084 Msa0413110:CDS 45.0%
TCTGGGCGAATAACTCATGA+AGG + chr3_2:57322607-57322626 Msa0413110:CDS 45.0%
GCCAGTAGCATGAAATTCGA+AGG - chr3_2:57322674-57322693 None:intergenic 45.0%
GATATTGGCACTTGGTCTGA+TGG - chr3_2:57322704-57322723 None:intergenic 45.0%
GCCAGAAAGATATTGGCACT+TGG - chr3_2:57322712-57322731 None:intergenic 45.0%
ACCATCGGCCAGAAAGATAT+TGG - chr3_2:57322719-57322738 None:intergenic 45.0%
GCAAGATCACAAGTCTAAGG+AGG + chr3_2:57322771-57322790 Msa0413110:CDS 45.0%
! ATTTGTTCCGTTTGCCGCTT+TGG + chr3_2:57322841-57322860 Msa0413110:CDS 45.0%
AAAGAAGTTCGCCTCCAAAG+CGG - chr3_2:57322858-57322877 None:intergenic 45.0%
TCATAAGACGTGTCTTGGTC+TGG + chr3_2:57322903-57322922 Msa0413110:CDS 45.0%
CATGTATAGGATCTCCCTGA+TGG + chr3_2:57323026-57323045 Msa0413110:intron 45.0%
GGACAAAACCATTCACCATC+AGG - chr3_2:57323044-57323063 None:intergenic 45.0%
!! TTTTGTCCATCGTGTCGATG+CGG + chr3_2:57323056-57323075 Msa0413110:CDS 45.0%
AGCCAAAGCAAATTCAACGG+GGG + chr3_2:57323086-57323105 Msa0413110:CDS 45.0%
CTGCGGAAAAGACTGTGAAA+AGG + chr3_2:57323377-57323396 Msa0413110:CDS 45.0%
ACAGCCCTTCAAAGTCTGTT+AGG + chr3_2:57323597-57323616 Msa0413110:CDS 45.0%
GCTGTCCTAACAGACTTTGA+AGG - chr3_2:57323605-57323624 None:intergenic 45.0%
TTAGGACAGCCAGTTTCAGT+GGG + chr3_2:57323615-57323634 Msa0413110:CDS 45.0%
TGAATGTTTCGAGCCCCTAA+AGG + chr3_2:57323764-57323783 Msa0413110:CDS 45.0%
CATCAGATCTCTGCAAGAAG+AGG - chr3_2:57323793-57323812 None:intergenic 45.0%
CTCTTCTTGCAGAGATCTGA+TGG + chr3_2:57323791-57323810 Msa0413110:CDS 45.0%
GAAAGGGGGAAAATGATAGG+GGG - chr3_2:57325134-57325153 None:intergenic 45.0%
CCAGAAAGGGGGAAAATGAT+AGG - chr3_2:57325131-57325150 None:intergenic 45.0%
! CCTATCATTTTCCCCCTTTC+TGG + chr3_2:57323985-57324004 Msa0413110:intron 45.0%
!!! CATTTTCCCCCTTTCTGGTT+TGG + chr3_2:57323990-57324009 Msa0413110:intron 45.0%
TCATGATGTTGAGAGACTCC+TGG + chr3_2:57324328-57324347 Msa0413110:intron 45.0%
GTAGGAGAAAGCGAGCAATT+AGG + chr3_2:57324890-57324909 Msa0413110:intron 45.0%
AGAAAGCGAGCAATTAGGGA+TGG + chr3_2:57324895-57324914 Msa0413110:intron 45.0%
GAAAGCGAGCAATTAGGGAT+GGG + chr3_2:57324896-57324915 Msa0413110:intron 45.0%
AAAGCGAGCAATTAGGGATG+GGG + chr3_2:57324897-57324916 Msa0413110:intron 45.0%
GGGGGAGAAAGATAGCAATT+AGG + chr3_2:57324916-57324935 Msa0413110:intron 45.0%
AGGAATGGGGAAATTAGGGA+AGG + chr3_2:57324961-57324980 Msa0413110:intron 45.0%
!!! CATTTTCCCCCTTTCTGGTT+TGG - chr3_2:57323990-57324009 None:intergenic 45.0%
! CCTATCATTTTCCCCCTTTC+TGG - chr3_2:57323985-57324004 None:intergenic 45.0%
CCAGAAAGGGGGAAAATGAT+AGG + chr3_2:57325131-57325150 Msa0413110:intron 45.0%
GAAAGGGGGAAAATGATAGG+GGG + chr3_2:57325134-57325153 Msa0413110:intron 45.0%
GGGGTGTAAAATCGCACAAT+TGG + chr3_2:57325180-57325199 Msa0413110:intron 45.0%
GTTGTTGTCACGTGACTGAA+AGG + chr3_2:57325280-57325299 Msa0413110:intron 45.0%
AAGGTCACAGGTTCAAGTCT+TGG + chr3_2:57325299-57325318 Msa0413110:intron 45.0%
TAACAGAAAAAAGGGCAGCC+CGG - chr3_2:57325424-57325443 None:intergenic 45.0%
GGGTTTCTATTCCGTACTTC+TGG + chr3_2:57325835-57325854 Msa0413110:CDS 45.0%
ATCAAGACGGCCATTACAGA+AGG - chr3_2:57325978-57325997 None:intergenic 45.0%
TCTTAGGGTCCTTGGAGATA+AGG + chr3_2:57326013-57326032 Msa0413110:intron 45.0%
CTTCAGCTACCTTATCTCCA+AGG - chr3_2:57326025-57326044 None:intergenic 45.0%
! GTAGCTGAAGTACCTCTTGT+TGG + chr3_2:57326035-57326054 Msa0413110:CDS 45.0%
GAAAAGGGGACGTCATATGA+GGG - chr3_2:57326162-57326181 None:intergenic 45.0%
TGAAAAGGGGACGTCATATG+AGG - chr3_2:57326163-57326182 None:intergenic 45.0%
CATCAGAAGCTCACGCAATT+AGG + chr3_2:57326525-57326544 Msa0413110:intron 45.0%
TTCCCACTGTGGTAGATACA+TGG + chr3_2:57326574-57326593 Msa0413110:CDS 45.0%
GTCCATGTATCTACCACAGT+GGG - chr3_2:57326579-57326598 None:intergenic 45.0%
ACTGTGGTAGATACATGGAC+CGG + chr3_2:57326579-57326598 Msa0413110:CDS 45.0%
TGATGGTACCCGGAAAATCT+AGG - chr3_2:57326665-57326684 None:intergenic 45.0%
GGCAAAACCGAATTTGGAGA+GGG - chr3_2:57326714-57326733 None:intergenic 45.0%
TGGCAAAACCGAATTTGGAG+AGG - chr3_2:57326715-57326734 None:intergenic 45.0%
CCAGTTGGCAAAACCGAATT+TGG - chr3_2:57326720-57326739 None:intergenic 45.0%
! CCAAATTCGGTTTTGCCAAC+TGG + chr3_2:57326717-57326736 Msa0413110:CDS 45.0%
GGTACACACTTGTCTCCAAT+AGG - chr3_2:57326758-57326777 None:intergenic 45.0%
! CTCAAGCGACTTTCCTTTTC+AGG - chr3_2:57327054-57327073 None:intergenic 45.0%
AACAATACGACTGTACAGGG+GGG - chr3_2:57327100-57327119 None:intergenic 45.0%
! TGTTATCGACTGTGTCACCA+TGG + chr3_2:57327778-57327797 Msa0413110:CDS 45.0%
GTGTCAGTGTTGTCAATGTC+AGG - chr3_2:57327953-57327972 None:intergenic 45.0%
TGTTGTTGGTCCACAGGAAT+TGG - chr3_2:57328072-57328091 None:intergenic 45.0%
TGCTCTCTTGTAAAGTGGAG+TGG + chr3_2:57328141-57328160 Msa0413110:CDS 45.0%
TCTTGTAAAGTGGAGTGGAC+TGG + chr3_2:57328146-57328165 Msa0413110:CDS 45.0%
!!! AAACAAAAAAAATAAAATTT+TGG + chr3_2:57324105-57324124 Msa0413110:intron 5.0%
!!! AACAAAAAAAATAAAATTTT+GGG + chr3_2:57324106-57324125 Msa0413110:intron 5.0%
TGGATGGTGATATCGGGTCA+TGG + chr3_2:57320928-57320947 Msa0413110:five_prime_UTR 50.0%
GGTCATGGAGTAAACATGGG+AGG + chr3_2:57320943-57320962 Msa0413110:five_prime_UTR 50.0%
! AACTCAACCAAAGGAGGCAC+TGG - chr3_2:57320975-57320994 None:intergenic 50.0%
! AGTGTGATGGAATGGAGGAG+AGG + chr3_2:57321075-57321094 Msa0413110:exon 50.0%
GGGATGAAGTTACGGAGAGA+TGG + chr3_2:57321168-57321187 Msa0413110:CDS 50.0%
!! GGAGGTAGTTGGTGACTACT+TGG + chr3_2:57321352-57321371 Msa0413110:CDS 50.0%
GAAGTTTCATGCAACGGTGC+TGG + chr3_2:57321515-57321534 Msa0413110:CDS 50.0%
TGTGCTTGCTTCTGACTCCA+AGG + chr3_2:57321664-57321683 Msa0413110:CDS 50.0%
TACAGGTACAAGCCACCCAA+TGG + chr3_2:57321773-57321792 Msa0413110:CDS 50.0%
GGACGGAGAAGAGTTCATCA+TGG - chr3_2:57321855-57321874 None:intergenic 50.0%
GATGGAAGCCTCACAACTAG+AGG - chr3_2:57321971-57321990 None:intergenic 50.0%
TCATCTGCCACTGCAACAGA+TGG - chr3_2:57321989-57322008 None:intergenic 50.0%
ATCGGAAGCGAAAACGCTTG+AGG + chr3_2:57322377-57322396 Msa0413110:CDS 50.0%
! TTCGCCCAGAAAGCACAGTA+CGG - chr3_2:57322597-57322616 None:intergenic 50.0%
! GCCAATATCTTTCTGGCCGA+TGG + chr3_2:57322715-57322734 Msa0413110:CDS 50.0%
CCTTGACGCAAATGACTGTG+TGG - chr3_2:57322808-57322827 None:intergenic 50.0%
CCACACAGTCATTTGCGTCA+AGG + chr3_2:57322805-57322824 Msa0413110:CDS 50.0%
TAAGACGTGTCTTGGTCTGG+AGG + chr3_2:57322906-57322925 Msa0413110:CDS 50.0%
! AGGATCTCCCTGATGGTGAA+TGG + chr3_2:57323033-57323052 Msa0413110:intron 50.0%
! TTTGTCCATCGTGTCGATGC+GGG + chr3_2:57323057-57323076 Msa0413110:CDS 50.0%
! CACCCCCGTTGAATTTGCTT+TGG - chr3_2:57323091-57323110 None:intergenic 50.0%
CAAAGCAAATTCAACGGGGG+TGG + chr3_2:57323089-57323108 Msa0413110:CDS 50.0%
CCGGCTTTCCACATAACTTC+CGG - chr3_2:57323355-57323374 None:intergenic 50.0%
CCGGAAGTTATGTGGAAAGC+CGG + chr3_2:57323352-57323371 Msa0413110:CDS 50.0%
! TATGTGGAAAGCCGGTTCTG+CGG + chr3_2:57323360-57323379 Msa0413110:CDS 50.0%
! CACAGTCTTTTCCGCAGAAC+CGG - chr3_2:57323374-57323393 None:intergenic 50.0%
GTTAGGACAGCCAGTTTCAG+TGG + chr3_2:57323614-57323633 Msa0413110:CDS 50.0%
TGGGTGCGGACAATCTAACA+TGG + chr3_2:57323634-57323653 Msa0413110:CDS 50.0%
GGGGTGCAAAATCGCACAAT+TGG - chr3_2:57323939-57323958 None:intergenic 50.0%
!! TTTCCCCCTTTCTGGTTTGG+AGG + chr3_2:57323993-57324012 Msa0413110:intron 50.0%
!! GAGGAGGCATCGAAAGAATG+GGG - chr3_2:57324171-57324190 None:intergenic 50.0%
!! GGAGGAGGCATCGAAAGAAT+GGG - chr3_2:57324172-57324191 None:intergenic 50.0%
!! TGGAGGAGGCATCGAAAGAA+TGG - chr3_2:57324173-57324192 None:intergenic 50.0%
AAGCGAGCAATTAGGGATGG+GGG + chr3_2:57324898-57324917 Msa0413110:intron 50.0%
!! GAAAATGGAGGAGGCATCGA+AGG + chr3_2:57324941-57324960 Msa0413110:intron 50.0%
!! TTTCCCCCTTTCTGGTTTGG+AGG - chr3_2:57323993-57324012 None:intergenic 50.0%
GTTCATGATAAGGGGAGCCT+TGG + chr3_2:57325245-57325264 Msa0413110:intron 50.0%
ACAACTTTACCGTTGCGCCA+AGG - chr3_2:57325265-57325284 None:intergenic 50.0%
TCACGTGACTGAAAGGTCAC+AGG + chr3_2:57325287-57325306 Msa0413110:intron 50.0%
GAAGCTCACGCAATTAGGAC+TGG + chr3_2:57326530-57326549 Msa0413110:intron 50.0%
TTTACCTGCTGTTCCCACTG+TGG + chr3_2:57326563-57326582 Msa0413110:CDS 50.0%
GGTCCATGTATCTACCACAG+TGG - chr3_2:57326580-57326599 None:intergenic 50.0%
TTCTGGCACATGATGGTACC+CGG - chr3_2:57326675-57326694 None:intergenic 50.0%
GACAAGTGTGTACCTTGCCA+AGG + chr3_2:57326764-57326783 Msa0413110:intron 50.0%
! AATGTGGGATGCTGGTGTTG+TGG - chr3_2:57327370-57327389 None:intergenic 50.0%
TAGCGCCACAACAGCATTAG+CGG - chr3_2:57327902-57327921 None:intergenic 50.0%
TGGCAATGTTGTTGGTCCAC+AGG - chr3_2:57328078-57328097 None:intergenic 50.0%
GACTGGTGTACTCTAGACGA+AGG + chr3_2:57328163-57328182 Msa0413110:CDS 50.0%
GGTGTACTCTAGACGAAGGA+AGG + chr3_2:57328167-57328186 Msa0413110:CDS 50.0%
TCTAGACGAAGGAAGGCGAA+AGG + chr3_2:57328174-57328193 Msa0413110:CDS 50.0%
CTAGACGAAGGAAGGCGAAA+GGG + chr3_2:57328175-57328194 Msa0413110:CDS 50.0%
TAGACGAAGGAAGGCGAAAG+GGG + chr3_2:57328176-57328195 Msa0413110:CDS 50.0%
GAAAGGGGAACATGAAGCGT+AGG + chr3_2:57328191-57328210 Msa0413110:CDS 50.0%
GATTAGGCCAGTGCCTCCTT+TGG + chr3_2:57320965-57320984 Msa0413110:five_prime_UTR 55.0%
! TACCAGGAAGCTTGGTGGGA+AGG + chr3_2:57321038-57321057 Msa0413110:five_prime_UTR 55.0%
GGCCTTGAAACTTCCGGAGA+TGG + chr3_2:57321400-57321419 Msa0413110:CDS 55.0%
! GGCAAGTCCTTTTCAGCTGG+AGG - chr3_2:57321482-57321501 None:intergenic 55.0%
!! ATGCAACGGTGCTGGTGAAG+CGG + chr3_2:57321523-57321542 Msa0413110:CDS 55.0%
GAGGCTTCCATCTGTTGCAG+TGG + chr3_2:57321979-57321998 Msa0413110:CDS 55.0%
GATTCATCGCTTCGGCGCTT+TGG - chr3_2:57322421-57322440 None:intergenic 55.0%
AGGCAAGAGGAAGACGCCTT+TGG - chr3_2:57322478-57322497 None:intergenic 55.0%
GGCACCGTACTGTGCTTTCT+GGG + chr3_2:57322590-57322609 Msa0413110:CDS 55.0%
!! TGTTCCGTTTGCCGCTTTGG+AGG + chr3_2:57322844-57322863 Msa0413110:CDS 55.0%
TTCGCCTCCAAAGCGGCAAA+CGG - chr3_2:57322851-57322870 None:intergenic 55.0%
ACGTGTCTTGGTCTGGAGGT+AGG + chr3_2:57322910-57322929 Msa0413110:intron 55.0%
! CAAATCCCGCATCGACACGA+TGG - chr3_2:57323065-57323084 None:intergenic 55.0%
CAAATTCAACGGGGGTGGTG+AGG + chr3_2:57323094-57323113 Msa0413110:CDS 55.0%
ACAGCCAGTTTCAGTGGGTG+CGG + chr3_2:57323620-57323639 Msa0413110:CDS 55.0%
TTGTCCGCACCCACTGAAAC+TGG - chr3_2:57323627-57323646 None:intergenic 55.0%
AGGGGCCTCCAAACCAGAAA+GGG - chr3_2:57325118-57325137 None:intergenic 55.0%
AAGGGGCCTCCAAACCAGAA+AGG - chr3_2:57325117-57325136 None:intergenic 55.0%
!! TTTCTGGTTTGGAGGCCCCT+TGG + chr3_2:57324001-57324020 Msa0413110:intron 55.0%
!! TTCTGGTTTGGAGGCCCCTT+GGG + chr3_2:57324002-57324021 Msa0413110:intron 55.0%
!! TGGAGGAGGCATCGAAGGAA+TGG + chr3_2:57324946-57324965 Msa0413110:intron 55.0%
!! GGAGGAGGCATCGAAGGAAT+GGG + chr3_2:57324947-57324966 Msa0413110:intron 55.0%
!! GAGGAGGCATCGAAGGAATG+GGG + chr3_2:57324948-57324967 Msa0413110:intron 55.0%
!! TTCTGGTTTGGAGGCCCCTT+GGG - chr3_2:57324002-57324021 None:intergenic 55.0%
!! TTTCTGGTTTGGAGGCCCCT+TGG - chr3_2:57324001-57324020 None:intergenic 55.0%
AAGGGGCCTCCAAACCAGAA+AGG + chr3_2:57325117-57325136 Msa0413110:intron 55.0%
AGGGGCCTCCAAACCAGAAA+GGG + chr3_2:57325118-57325137 Msa0413110:intron 55.0%
! GGGAAAGGGTCCCACCATTT+TGG - chr3_2:57325371-57325390 None:intergenic 55.0%
CATACGCAGGGTCTGGGAAA+GGG - chr3_2:57325385-57325404 None:intergenic 55.0%
TTTCCCAGACCCTGCGTATG+CGG + chr3_2:57325385-57325404 Msa0413110:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr3_2:57325397-57325416 None:intergenic 55.0%
TCTACCACAGTGGGAACAGC+AGG - chr3_2:57326570-57326589 None:intergenic 55.0%
! GATACATGGACCGGCGCTTT+TGG + chr3_2:57326588-57326607 Msa0413110:CDS 55.0%
CACCTTCCCACCAAGCTTCC+TGG - chr3_2:57321043-57321062 None:intergenic 60.0%
GATGGGAGCGACGAGGGAAA+TGG + chr3_2:57321186-57321205 Msa0413110:CDS 60.0%
GGAACATGACAGTCACCGGC+AGG - chr3_2:57321902-57321921 None:intergenic 60.0%
! GGGCACCGTACTGTGCTTTC+TGG + chr3_2:57322589-57322608 Msa0413110:CDS 60.0%
GGGCCTCCAAACCAGAAAGG+GGG - chr3_2:57325120-57325139 None:intergenic 60.0%
GGGGCCTCCAAACCAGAAAG+GGG - chr3_2:57325119-57325138 None:intergenic 60.0%
GGGGCCTCCAAACCAGAAAG+GGG + chr3_2:57325119-57325138 Msa0413110:intron 60.0%
GGGCCTCCAAACCAGAAAGG+GGG + chr3_2:57325120-57325139 Msa0413110:intron 60.0%
TAAGGGGAGCCTTGGCGCAA+CGG + chr3_2:57325253-57325272 Msa0413110:intron 60.0%
GCATACGCAGGGTCTGGGAA+AGG - chr3_2:57325386-57325405 None:intergenic 60.0%
TTCCCAGACCCTGCGTATGC+GGG + chr3_2:57325386-57325405 Msa0413110:intron 60.0%
GCTAAAGCTCCCGCATACGC+AGG - chr3_2:57325398-57325417 None:intergenic 60.0%
! ATGCGGGAGCTTTAGCGCAC+CGG + chr3_2:57325402-57325421 Msa0413110:intron 60.0%
GGCGGAGCAACCAATTCCTG+TGG + chr3_2:57328059-57328078 Msa0413110:intron 60.0%
ACGGAGAGATGGGAGCGACG+AGG + chr3_2:57321179-57321198 Msa0413110:CDS 65.0%
CGGAGAGATGGGAGCGACGA+GGG + chr3_2:57321180-57321199 Msa0413110:CDS 65.0%
CATCGCTTCGGCGCTTTGGC+AGG - chr3_2:57322417-57322436 None:intergenic 65.0%
CTCCCGCATACGCAGGGTCT+GGG - chr3_2:57325391-57325410 None:intergenic 65.0%
! TGCGGGAGCTTTAGCGCACC+GGG + chr3_2:57325403-57325422 Msa0413110:intron 65.0%
GCTCCCGCATACGCAGGGTC+TGG - chr3_2:57325392-57325411 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 57320835 57328362 57320835 ID=Msa0413110;Name=Msa0413110
chr3_2 mRNA 57320835 57328362 57320835 ID=Msa0413110-mRNA-1;Parent=Msa0413110;Name=Msa0413110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=251|1|1|1|1|0.9|10|150|1007
chr3_2 exon 57320835 57322927 57320835 ID=Msa0413110-mRNA-1:exon:11696;Parent=Msa0413110-mRNA-1
chr3_2 exon 57323035 57323155 57323035 ID=Msa0413110-mRNA-1:exon:11697;Parent=Msa0413110-mRNA-1
chr3_2 exon 57323313 57323398 57323313 ID=Msa0413110-mRNA-1:exon:11698;Parent=Msa0413110-mRNA-1
chr3_2 exon 57323591 57323835 57323591 ID=Msa0413110-mRNA-1:exon:11699;Parent=Msa0413110-mRNA-1
chr3_2 exon 57325808 57325894 57325808 ID=Msa0413110-mRNA-1:exon:11700;Parent=Msa0413110-mRNA-1
chr3_2 exon 57326019 57326118 57326019 ID=Msa0413110-mRNA-1:exon:11701;Parent=Msa0413110-mRNA-1
chr3_2 exon 57326531 57326738 57326531 ID=Msa0413110-mRNA-1:exon:11702;Parent=Msa0413110-mRNA-1
chr3_2 exon 57326823 57326946 57326823 ID=Msa0413110-mRNA-1:exon:11703;Parent=Msa0413110-mRNA-1
chr3_2 exon 57327742 57327799 57327742 ID=Msa0413110-mRNA-1:exon:11704;Parent=Msa0413110-mRNA-1
chr3_2 exon 57328060 57328362 57328060 ID=Msa0413110-mRNA-1:exon:11705;Parent=Msa0413110-mRNA-1
chr3_2 five_prime_UTR 57320835 57321085 57320835 ID=Msa0413110-mRNA-1:five_prime_utr;Parent=Msa0413110-mRNA-1
chr3_2 CDS 57321086 57322927 57321086 ID=Msa0413110-mRNA-1:cds;Parent=Msa0413110-mRNA-1
chr3_2 CDS 57323035 57323155 57323035 ID=Msa0413110-mRNA-1:cds;Parent=Msa0413110-mRNA-1
chr3_2 CDS 57323313 57323398 57323313 ID=Msa0413110-mRNA-1:cds;Parent=Msa0413110-mRNA-1
chr3_2 CDS 57323591 57323835 57323591 ID=Msa0413110-mRNA-1:cds;Parent=Msa0413110-mRNA-1
chr3_2 CDS 57325808 57325894 57325808 ID=Msa0413110-mRNA-1:cds;Parent=Msa0413110-mRNA-1
chr3_2 CDS 57326019 57326118 57326019 ID=Msa0413110-mRNA-1:cds;Parent=Msa0413110-mRNA-1
chr3_2 CDS 57326531 57326738 57326531 ID=Msa0413110-mRNA-1:cds;Parent=Msa0413110-mRNA-1
chr3_2 CDS 57326823 57326946 57326823 ID=Msa0413110-mRNA-1:cds;Parent=Msa0413110-mRNA-1
chr3_2 CDS 57327742 57327799 57327742 ID=Msa0413110-mRNA-1:cds;Parent=Msa0413110-mRNA-1
chr3_2 CDS 57328060 57328212 57328060 ID=Msa0413110-mRNA-1:cds;Parent=Msa0413110-mRNA-1
chr3_2 three_prime_UTR 57328213 57328362 57328213 ID=Msa0413110-mRNA-1:three_prime_utr;Parent=Msa0413110-mRNA-1
Gene Sequence

>Msa0413110

ATGGAGGAGAGGACTGTGTTTTTCCCTGATTTGGGTGATGAAATGAAGGTCGGAATTCAGGAAATGCGGATTACTCAGGATTGGGATGAAGTTACGGAGAGATGGGAGCGACGAGGGAAATGGTTGCTTTTTGAATTGATTGAGGAGTTGTATCTTCCGGTATCGGTAAGGCAAATTTGGTATGATGTGCGACAAAAAAAGGAATTTGCCGTGATTGGTGAATGGACATTGAATGAGAAGAAGGATTTGTGGAGACACTTGATAATGGAGGTAGTTGGTGACTACTTGGCTGTTACAGTAAAGGAAGTTTTCTCGGCCTTGAAACTTCCGGAGATGGAATCAGGTGAATTATTATCTGAAAAGGAAGAGTTTGAGCAGAAAGAACTTGTTGTTCCTCCAGCTGAAAAGGACTTGCCTAAGTTTCAAAATGAAGTTTCATGCAACGGTGCTGGTGAAGCGGTTGCCATCAATTCTGAGAAAAATGAACACAGATTGTCAACTGATTTAAAGTCAAATTGTTCGTGGGAACGTGTAATATTTTCTGAAACTGAATACTGTCCCGATGCTGTTAAGCAATATGTGCTTGCTTCTGACTCCAAGGCAACTATGGCATCTTTGAAGGAAAAAGTATGGAAACATCTTGCATATCTTGGATGGGAAATTGACATTGACCTGGGTAGTAAAAAATACAGGTACAAGCCACCCAATGGAATCCATTGCAATAATAAAGTTTACTACTCACTTATTCTACTTTGTAAAGCTGAATCCATGATGAACTCTTCTCCGTCCGAAAATGGTCTTGATATAAGGCATCCTGCCGGTGACTGTCATGTTCCAAATGTGCCTCTTAGTCCATCTGAAAAGATTCAGAACCGAGTATCTCCTCTAGTTGTGAGGCTTCCATCTGTTGCAGTGGCAGATGAACAAGCTTATTGTCCTCAAGCCATTGTGGAATACCACAAACATGCACTCAAGAAGACCTGCAATCGGGCATATAAAAGGAAACTTATTTCAAAAGTACGAAATCATCTGAAAGCAGAAGGATGGATTTTAATTGATCCACCTCCAAATAATAGAAGAAGAGGTGTTTTATACATTTCTCCACTGAAACAGAAATTCTTCTCATTGAATACAGTATGCAGTTTCTTACTTGAAGAAAGTATTCAGAAATCGACTATTTCTGGCATGCAACCTTTAAATACCTTGACCATTCATGAGGAAAATGTTGATCAGGTATTGAGTGATGATTTATCAAGTAGAGACAGTGTTGCTGCGAATAAATCAAGTGCAAATCGGAAGCGAAAACGCTTGAGGAATTCAGATGGCAGCCTGCCAAAGCGCCGAAGCGATGAATCAACTCTAAGGGTACTGAGATCAAATGAAAGGGTGCCAAAGGCGTCTTCCTCTTGCCTTTCACATCATAAACCTTTAAATGTTCTGTCTTGGTTGATAGACAGCAACATGTTGTTACCAAGGTCTAAGGTTTTTTGTCGAGCAAAACGTGGGCACCGTACTGTGCTTTCTGGGCGAATAACTCATGAAGGCATCAAGTGTAACTGTTGTTCAAGAATATACAGTCTTGTTTCCTTCGAATTTCATGCTACTGGCAGTAATACCATCAGACCAAGTGCCAATATCTTTCTGGCCGATGGTAGATCGCTCTTATCTTGCCAGATACAAATAATGCAAGATCACAAGTCTAAGGAGGCTATGATAAAACCACACAGTCATTTGCGTCAAGGTGAAAACGACTACATTTGTTCCGTTTGCCGCTTTGGAGGCGAACTTCTTTTGTGTGATCAATGTCCGTCTTCATATCATAAGACGTGTCTTGGTCTGGAGGATCTCCCTGATGGTGAATGGTTTTGTCCATCGTGTCGATGCGGGATTTGTAGCCAAAGCAAATTCAACGGGGGTGGTGAGGATGAGCATTTCCTTACATGCATTCAGTGTGAACATAAATATCATGTTGCGTGCCTGAAAAGTAGAGATACCAGTAAATCCGGAAGTTATGTGGAAAGCCGGTTCTGCGGAAAAGACTGTGAAAAGTTATATACAGCCCTTCAAAGTCTGTTAGGACAGCCAGTTTCAGTGGGTGCGGACAATCTAACATGGACATTAGTGAAGTGTGCCGACTCTGAGAGTTGTGAACTTGATAATAGTAAAAGTGGATTATTGGCAGAAAGTTACAGCAAACTCAATGTTGCTCTTTCATTGATGCATGAATGTTTCGAGCCCCTAAAGGAATCCTCTTCTTGCAGAGATCTGATGGAAAATGTTTTATTCAGCCGATGGTCAGAACTTAATCGAATGAATTTCCAGGGTTTCTATTCCGTACTTCTGGAGAGAAATGAAGATCTGGTCAGTGTAGCAACTATTAGGGTCCTTGGAGATAAGGTAGCTGAAGTACCTCTTGTTGGTACCAGATTTCAGTATCGTCGTCATGGAATGTGTCGCATATTAATGGATGAATTGGAGAAGAAGCTCACGCAATTAGGACTGGAACGTCTCGTTTTACCTGCTGTTCCCACTGTGGTAGATACATGGACCGGCGCTTTTGGATTTTCAAAGATGCCAAACTTTGAAAGATCACAATTTCTAAACTATACTTTCCTAGATTTTCCGGGTACCATCATGTGCCAGAAGTTTTTAGCAAATATTCCCTCTCCAAATTCGGTTTTGCCAACTGAGTTCCAACGAAAACAAGATGCTATCTCCGGAAGCAGTAGTGCTAGTAATAAGTCTCCAGTTTCTGAAGTTTACCAAGCAGAAGAGATAGACAAAAGAGAATCGTTGGATCAACAAATGATGGATACTTCTGAAGGCGATAATGATAATCTTGGCAGTGCTGTTATCGACTGTGTCACCATGGCGGAGCAACCAATTCCTGTGGACCAACAACATTGCCAGAATGAAACCACTCAAAAATGCCAGAATGAAACCACTCAAAAGTGCTCTCTTGTAAAGTGGAGTGGACTGGTGTACTCTAGACGAAGGAAGGCGAAAGGGGAACATGAAGCGTAG
Protein sequence

>Msa0413110

MEERTVFFPDLGDEMKVGIQEMRITQDWDEVTERWERRGKWLLFELIEELYLPVSVRQIWYDVRQKKEFAVIGEWTLNEKKDLWRHLIMEVVGDYLAVTVKEVFSALKLPEMESGELLSEKEEFEQKELVVPPAEKDLPKFQNEVSCNGAGEAVAINSEKNEHRLSTDLKSNCSWERVIFSETEYCPDAVKQYVLASDSKATMASLKEKVWKHLAYLGWEIDIDLGSKKYRYKPPNGIHCNNKVYYSLILLCKAESMMNSSPSENGLDIRHPAGDCHVPNVPLSPSEKIQNRVSPLVVRLPSVAVADEQAYCPQAIVEYHKHALKKTCNRAYKRKLISKVRNHLKAEGWILIDPPPNNRRRGVLYISPLKQKFFSLNTVCSFLLEESIQKSTISGMQPLNTLTIHEENVDQVLSDDLSSRDSVAANKSSANRKRKRLRNSDGSLPKRRSDESTLRVLRSNERVPKASSSCLSHHKPLNVLSWLIDSNMLLPRSKVFCRAKRGHRTVLSGRITHEGIKCNCCSRIYSLVSFEFHATGSNTIRPSANIFLADGRSLLSCQIQIMQDHKSKEAMIKPHSHLRQGENDYICSVCRFGGELLLCDQCPSSYHKTCLGLEDLPDGEWFCPSCRCGICSQSKFNGGGEDEHFLTCIQCEHKYHVACLKSRDTSKSGSYVESRFCGKDCEKLYTALQSLLGQPVSVGADNLTWTLVKCADSESCELDNSKSGLLAESYSKLNVALSLMHECFEPLKESSSCRDLMENVLFSRWSELNRMNFQGFYSVLLERNEDLVSVATIRVLGDKVAEVPLVGTRFQYRRHGMCRILMDELEKKLTQLGLERLVLPAVPTVVDTWTGAFGFSKMPNFERSQFLNYTFLDFPGTIMCQKFLANIPSPNSVLPTEFQRKQDAISGSSSASNKSPVSEVYQAEEIDKRESLDQQMMDTSEGDNDNLGSAVIDCVTMAEQPIPVDQQHCQNETTQKCQNETTQKCSLVKWSGLVYSRRRKAKGEHEA*