AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0414670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414670 MtrunA17_Chr3g0107701 95.719 911 26 1 1 898 1 911 0.0 1795
Msa0414670 MtrunA17_Chr5g0432721 55.381 827 312 13 1 819 1 778 0.0 832
Msa0414670 MtrunA17_Chr4g0012861 49.266 885 409 15 16 881 19 882 0.0 797
Msa0414670 MtrunA17_Chr2g0281191 42.599 831 389 15 17 815 43 817 0.0 586
Msa0414670 MtrunA17_Chr7g0244871 60.215 93 37 0 318 410 5 97 2.19e-34 127
Msa0414670 MtrunA17_Chr7g0251891 47.059 85 44 1 325 408 16 100 1.74e-19 87.8
Msa0414670 MtrunA17_Chr7g0237841 37.255 102 62 2 325 424 623 724 5.02e-16 82.8
Msa0414670 MtrunA17_Chr1g0178071 36.364 165 80 9 306 456 54 207 5.59e-14 74.3
Msa0414670 MtrunA17_Chr7g0276471 40.659 91 49 3 325 412 117 205 4.83e-13 72.4
Msa0414670 MtrunA17_Chr5g0422501 35.345 116 61 4 325 428 235 348 1.75e-12 70.5
Msa0414670 MtrunA17_Chr8g0345771 38.462 91 51 3 325 412 171 259 2.04e-12 70.9
Msa0414670 MtrunA17_Chr7g0266821 31.343 201 108 10 330 526 65 239 4.14e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414670 AT2G30470.1 48.438 832 330 19 1 823 6 747 0.0 687
Msa0414670 AT4G32010.2 49.391 739 279 17 15 748 20 668 0.0 660
Msa0414670 AT4G32010.1 49.125 743 279 18 15 748 20 672 0.0 656
Msa0414670 AT4G21550.2 54.861 144 61 2 294 435 294 435 2.47e-45 172
Msa0414670 AT4G21550.2 46.575 73 39 0 17 89 31 103 7.56e-17 85.1
Msa0414670 AT4G21550.3 54.861 144 61 2 294 435 294 435 6.28e-45 171
Msa0414670 AT4G21550.3 46.575 73 39 0 17 89 31 103 1.39e-16 84.7
Msa0414670 AT4G21550.1 54.861 144 61 2 294 435 294 435 1.54e-44 172
Msa0414670 AT4G21550.1 46.575 73 39 0 17 89 31 103 6.04e-17 86.3
Msa0414670 AT4G21550.1 39.683 126 68 3 669 791 528 648 9.85e-12 69.3
Msa0414670 AT3G26790.1 42.308 104 59 1 325 427 91 194 4.68e-20 92.4
Msa0414670 AT3G24650.1 39.216 102 60 2 325 424 571 672 4.60e-16 83.6
Msa0414670 AT1G13260.1 39.091 110 60 4 325 429 187 294 1.69e-14 76.3
Msa0414670 AT2G36080.4 39.815 108 56 4 325 425 37 142 2.80e-14 72.4
Msa0414670 AT2G36080.2 39.815 108 56 4 325 425 37 142 2.80e-14 72.4
Msa0414670 AT1G28300.1 43.023 86 48 1 325 409 170 255 2.90e-14 75.9
Msa0414670 AT2G36080.1 39.815 108 56 4 325 425 37 142 6.55e-14 72.8
Msa0414670 AT4G01500.1 41.573 89 49 2 325 412 35 121 1.44e-13 73.6
Msa0414670 AT1G68840.2 41.935 93 47 3 325 412 187 277 1.64e-13 73.6
Msa0414670 AT1G68840.1 41.935 93 47 3 325 412 187 277 1.64e-13 73.6
Msa0414670 AT2G36080.3 39.815 108 56 4 325 425 37 142 5.60e-13 70.1
Msa0414670 AT5G06250.5 31.707 164 89 6 314 459 37 195 6.76e-13 70.5
Msa0414670 AT5G06250.4 31.707 164 89 6 314 459 37 195 6.85e-13 70.9
Msa0414670 AT5G06250.2 31.707 164 89 6 314 459 37 195 7.26e-13 70.5
Msa0414670 AT5G06250.3 33.557 149 76 6 314 444 37 180 8.69e-13 70.1
Msa0414670 AT5G06250.1 33.557 149 76 6 314 444 37 180 9.19e-13 70.1
Msa0414670 AT3G61970.1 39.362 94 49 3 325 412 22 113 1.01e-12 70.5
Msa0414670 AT2G46870.1 39.560 91 50 3 325 412 34 122 1.17e-12 70.5
Msa0414670 AT1G01030.2 39.560 91 50 3 325 412 55 143 5.84e-12 68.6
Msa0414670 AT1G25560.1 34.167 120 65 4 325 432 194 311 6.17e-12 68.9
Msa0414670 AT1G01030.1 39.560 91 50 3 325 412 55 143 6.44e-12 68.6
Msa0414670 AT3G11580.4 38.235 102 47 3 325 412 28 127 2.13e-11 65.1
Msa0414670 AT3G11580.2 38.235 102 47 3 325 412 28 127 2.13e-11 65.1
Msa0414670 AT3G11580.5 38.235 102 47 3 325 412 28 127 2.13e-11 65.1

Find 251 sgRNAs with CRISPR-Local

Find 561 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATATCCCTTGCATTATTT+TGG 0.089803 3_2:+60337428 None:intergenic
CGGTTCTTGGACCGCCATTT+TGG 0.204307 3_2:+60333070 None:intergenic
AACGGGGAACTTCGCTTAAA+TGG 0.226581 3_2:-60335322 Msa0414670:CDS
AAAAGTAAGAGATTGCTTAT+TGG 0.238596 3_2:-60335163 Msa0414670:CDS
CAAACCTCAGCACAAGCTTT+TGG 0.244863 3_2:+60336231 None:intergenic
CAAAACTTAGTGATCATATA+TGG 0.245085 3_2:-60333110 Msa0414670:CDS
ATGAATATAGAAACTGAAAA+AGG 0.252818 3_2:-60336947 Msa0414670:CDS
AACAACATGATTACATCTAA+TGG 0.257026 3_2:-60337289 Msa0414670:CDS
TCTGACATTGGTATGGTAAA+TGG 0.260179 3_2:-60340324 Msa0414670:CDS
ATCAGTTACTTCCTAGATAT+TGG 0.275669 3_2:-60336871 Msa0414670:CDS
ATTTCAGTATTAACGGTTCT+TGG 0.276487 3_2:+60333057 None:intergenic
GATGTAATCATGTTGTTTAT+CGG 0.277647 3_2:+60337295 None:intergenic
GAACCTTCACATTTGGTTAC+TGG 0.279558 3_2:-60335292 Msa0414670:CDS
AGCCAGAAGGCTCGTGTTCT+TGG 0.294965 3_2:+60333580 None:intergenic
CTCTGAAGGTCTTCCTTTGC+GGG 0.296256 3_2:-60336025 Msa0414670:CDS
TACATCCTGCTGTTGTTATT+AGG 0.296564 3_2:+60335955 None:intergenic
GGTTTGCTTAAAGCCGAAAA+TGG 0.299412 3_2:-60335262 Msa0414670:CDS
GGCCCTGCTGATTCCGCAGC+TGG 0.302776 3_2:-60333513 Msa0414670:CDS
TTCTCCTAAAACGGCTAAAC+TGG 0.304782 3_2:+60333545 None:intergenic
GTCGATGAAACGGGCCATTT+AGG 0.307880 3_2:+60337451 None:intergenic
GGAAGGTCAACATTCTTCTT+TGG 0.308714 3_2:-60333031 Msa0414670:CDS
ATCTTCAGCGCCTCTTCATC+TGG 0.309531 3_2:-60334836 Msa0414670:CDS
TAGATATTGGCCTAGGATTA+CGG 0.327990 3_2:-60336858 Msa0414670:CDS
TATTGGTAATGATGATTCTA+TGG 0.330411 3_2:-60335146 Msa0414670:CDS
CATATTAATATGAACCAAAA+TGG 0.335008 3_2:-60333084 Msa0414670:CDS
GTAATACTGAAAATCCTAAA+TGG 0.335624 3_2:-60337465 Msa0414670:CDS
TTCCTCCATTTCAGTATTAA+CGG 0.340148 3_2:+60333050 None:intergenic
GCCGTCTTTGAATATGTGTT+TGG 0.340861 3_2:-60337113 Msa0414670:CDS
TATCTTGACTTCGGCGGTAT+AGG 0.341914 3_2:-60338649 Msa0414670:CDS
TCTTTGGCCACTCAATCTAA+TGG 0.347543 3_2:-60333015 Msa0414670:CDS
ATCCAAGAACACGAGCCTTC+TGG 0.347833 3_2:-60333582 Msa0414670:CDS
CTCTAAATGGAGAAAGTTAC+CGG 0.350506 3_2:-60334081 Msa0414670:CDS
AAGGCCGGTCTTTAACAGTT+TGG 0.353568 3_2:+60336973 None:intergenic
AAATACTTCCCAACTAAATA+TGG 0.354913 3_2:-60338611 Msa0414670:intron
AAGAAGTTAGGCCGTCATTC+AGG 0.358196 3_2:-60337255 Msa0414670:CDS
ATTCATTACCCTTCACATCT+TGG 0.362672 3_2:+60336001 None:intergenic
CGAGCTGAGCTCAAGGGAAT+TGG 0.363584 3_2:-60333871 Msa0414670:CDS
CAGGAGCTGGAGCGTTTGTC+TGG 0.368698 3_2:-60336833 Msa0414670:CDS
AATGTGATGATTGCTCTAAA+TGG 0.377625 3_2:-60334094 Msa0414670:CDS
AAGAAGAGGACTCGAAATAT+TGG 0.381088 3_2:-60335190 Msa0414670:CDS
AGGCCGGTCTTTAACAGTTT+GGG 0.381417 3_2:+60336974 None:intergenic
TCCGTTCACCAAATGGTAAC+GGG 0.384737 3_2:-60335339 Msa0414670:CDS
GGACATGTTCGGAAAATGTC+TGG 0.386985 3_2:-60334034 Msa0414670:CDS
CGAAGTTCCCCGTTACCATT+TGG 0.389637 3_2:+60335331 None:intergenic
GCTCCAGCTGCGGAATCAGC+AGG 0.391479 3_2:+60333510 None:intergenic
TCATTCAGGGAAGGGGATAC+TGG 0.395233 3_2:-60337241 Msa0414670:CDS
CCGTCTTTGAATATGTGTTT+GGG 0.395837 3_2:-60337112 Msa0414670:CDS
ACAACATGATTACATCTAAT+GGG 0.396289 3_2:-60337288 Msa0414670:CDS
AAGAGAAGTTGCGAATCCTT+TGG 0.400555 3_2:-60333244 Msa0414670:CDS
ACTTGCGAGTCATCGCGATT+TGG 0.401458 3_2:+60333144 None:intergenic
TCTACATCTGCACATTCTAA+TGG 0.401601 3_2:-60335436 Msa0414670:CDS
ACATCCCGAACCTTCACATT+TGG 0.405564 3_2:-60335299 Msa0414670:CDS
GATTTACGTGCTGGTGATAC+TGG 0.406488 3_2:-60335895 Msa0414670:intron
ACTCTGAAGGTCTTCCTTTG+CGG 0.407452 3_2:-60336026 Msa0414670:CDS
TCTTTCTTTGTTCCCAACAT+TGG 0.407495 3_2:+60332951 None:intergenic
TCCCTTGAGCTCAGCTCGTC+CGG 0.408864 3_2:+60333876 None:intergenic
TTATCGGAGCATGACTCATA+TGG 0.413523 3_2:+60337311 None:intergenic
TTTAACAGTTTGGGAAGTAT+AGG 0.414755 3_2:+60336983 None:intergenic
ATTCAGCCACCAAGCGGAAA+AGG 0.418817 3_2:-60333438 Msa0414670:CDS
CCACGTATTGCTCGGCCTCC+TGG 0.420064 3_2:-60336911 Msa0414670:CDS
GACAATGCTTGGCTTGACAC+TGG 0.420212 3_2:+60335075 None:intergenic
TTAAACTTACCATATTTAGT+TGG 0.425360 3_2:+60338602 None:intergenic
TCCTCGATTGTGACAATGCT+TGG 0.426368 3_2:+60335064 None:intergenic
ATGTGTTTGGGAAACCCGTC+AGG 0.426949 3_2:-60337100 Msa0414670:CDS
CTCAACTTTGCTTCAAGTGC+GGG 0.431608 3_2:-60340248 Msa0414670:intron
ATTGCTCGGCCTCCTGGTGA+TGG 0.435069 3_2:-60336905 Msa0414670:CDS
AGTAACCAAATGTGAAGGTT+CGG 0.436712 3_2:+60335294 None:intergenic
ACATTTAGTCGGATAGATCC+TGG 0.438208 3_2:-60335628 Msa0414670:CDS
AAGAACCGTTAATACTGAAA+TGG 0.438568 3_2:-60333055 Msa0414670:CDS
GTAACCAAATGTGAAGGTTC+GGG 0.441449 3_2:+60335295 None:intergenic
TCCTCCCAAGTGGACATGTT+CGG 0.442585 3_2:-60334045 Msa0414670:CDS
GAGAAAACGTGAAGTGGGTA+TGG 0.445074 3_2:+60340736 None:intergenic
TCGGCCTCCTGGTGATGGGA+GGG 0.451096 3_2:-60336900 Msa0414670:CDS
ACCAATCCGACCTGCATCAC+TGG 0.451773 3_2:+60336266 None:intergenic
GGGTGTGACCCCTTGTATAC+AGG 0.451818 3_2:-60335923 Msa0414670:CDS
ATTCTCATTTCCACCAGAAA+AGG 0.451824 3_2:+60335393 None:intergenic
AACAACTCTTTCCCACCATC+TGG 0.452851 3_2:-60337076 Msa0414670:CDS
CGGCCTCCTGGTGATGGGAG+GGG 0.454483 3_2:-60336899 Msa0414670:CDS
TAAACTTACCATATTTAGTT+GGG 0.454535 3_2:+60338603 None:intergenic
GCAAAAGTTAATGACTGAAC+AGG 0.455178 3_2:+60337196 None:intergenic
AAATCCATGGCCTGTATACA+AGG 0.462450 3_2:+60335913 None:intergenic
TTCTATATTCATGGTAAGGC+CGG 0.462900 3_2:+60336958 None:intergenic
AAATTCCATCGTCAACAAAC+TGG 0.467730 3_2:-60338834 Msa0414670:CDS
CAGTTTCTATATTCATGGTA+AGG 0.468963 3_2:+60336954 None:intergenic
TTCTCTTGATGCTCCACCAT+TGG 0.470671 3_2:+60333260 None:intergenic
CTCGGCCTCCTGGTGATGGG+AGG 0.470919 3_2:-60336901 Msa0414670:CDS
AAAGGGTGGGGTTTACGATC+TGG 0.472704 3_2:-60340279 Msa0414670:CDS
TAGGATTACGGACCAGGAGC+TGG 0.472738 3_2:-60336846 Msa0414670:CDS
AAGATCTATCTTTCCAGCGC+TGG 0.475080 3_2:+60333176 None:intergenic
GATGCATTGCATCCAATGTT+GGG 0.477504 3_2:-60332963 Msa0414670:CDS
GGAAAGAGTTGTTCCCTGAC+GGG 0.480170 3_2:+60337086 None:intergenic
GATCTTCTCCGTTCACCAAA+TGG 0.483108 3_2:-60335346 Msa0414670:CDS
CTATGGAGTTGAGACTTACA+TGG 0.484609 3_2:-60335129 Msa0414670:CDS
AGAAGTTAGGCCGTCATTCA+GGG 0.485967 3_2:-60337254 Msa0414670:CDS
CCTTCAGAGTGTGTAATATG+AGG 0.486209 3_2:+60336039 None:intergenic
CTTGGCTTGACACTGGGCGG+TGG 0.487076 3_2:+60335082 None:intergenic
CCCCGTTACCATTTGGTGAA+CGG 0.487521 3_2:+60335338 None:intergenic
CAACAGCAGGATGTACGTAT+TGG 0.488320 3_2:-60335947 Msa0414670:CDS
GTGCTGAGTGCCAGTGATGC+AGG 0.488585 3_2:-60336276 Msa0414670:CDS
AATGACATGCAATAATTCAC+TGG 0.490207 3_2:-60335236 Msa0414670:CDS
AACTATTTCGTCCAGGGTGA+AGG 0.490506 3_2:-60334129 Msa0414670:intron
TACTTCCTAGATATTGGCCT+AGG 0.490891 3_2:-60336865 Msa0414670:CDS
AGAGAGAGAAAACGTGAAGT+GGG 0.493467 3_2:+60340731 None:intergenic
CACCGGACGAGCTGAGCTCA+AGG 0.494872 3_2:-60333878 Msa0414670:CDS
CAGACAAACGCTCCAGCTCC+TGG 0.495028 3_2:+60336834 None:intergenic
GAACAGCCGGGACGGTGTCT+AGG 0.499276 3_2:+60333474 None:intergenic
TTCAGCCACCAAGCGGAAAA+GGG 0.500074 3_2:-60333437 Msa0414670:CDS
AAAACTTAGTGATCATATAT+GGG 0.502313 3_2:-60333109 Msa0414670:CDS
ATGGTTCGTGTGTTCATGAA+TGG 0.503991 3_2:-60340305 Msa0414670:CDS
CTCAGCACCTTCTCAAACAA+TGG 0.504763 3_2:+60336291 None:intergenic
GGGAAAGAGTTGTTCCCTGA+CGG 0.506096 3_2:+60337085 None:intergenic
TTCTAATGGCGGTTCTGCAA+AGG 0.510425 3_2:-60335422 Msa0414670:CDS
TTGCTCGGCCTCCTGGTGAT+GGG 0.511113 3_2:-60336904 Msa0414670:CDS
TAGAGAGAGAAAACGTGAAG+TGG 0.511563 3_2:+60340730 None:intergenic
TCTAATGGCGGTTCTGCAAA+GGG 0.512085 3_2:-60335421 Msa0414670:CDS
GAGGTTGGCGAGTCCAGCGC+TGG 0.513442 3_2:-60333189 Msa0414670:CDS
TTCTTACCCCTCCCATCACC+AGG 0.513704 3_2:+60336893 None:intergenic
ATTCAGCTTCAGAGAAGAAG+AGG 0.515423 3_2:-60335204 Msa0414670:CDS
ACTACAGACGGAAGACTTGA+GGG 0.517542 3_2:-60337046 Msa0414670:CDS
GATCTCGGCCCTTGATGAAA+GGG 0.518190 3_2:+60337010 None:intergenic
GCCAGTGATGCAGGTCGGAT+TGG 0.520413 3_2:-60336267 Msa0414670:CDS
CATGAATGGAAGAAAGGGTG+GGG 0.520502 3_2:-60340291 Msa0414670:CDS
GTAATCCTAGGCCAATATCT+AGG 0.520534 3_2:+60336860 None:intergenic
GTAACCAACCTGTGTGTCTA+CGG 0.523912 3_2:+60335567 None:intergenic
TTTGGCCTAATAACAACAGC+AGG 0.525991 3_2:-60335960 Msa0414670:CDS
TTGGCCTAGGATTACGGACC+AGG 0.525994 3_2:-60336852 Msa0414670:CDS
ACAATGCTTGGCTTGACACT+GGG 0.526210 3_2:+60335076 None:intergenic
CATTTAGTCGGATAGATCCT+GGG 0.527144 3_2:-60335627 Msa0414670:CDS
ATGCTCTTCTTCCTCCCAAG+TGG 0.528369 3_2:-60334055 Msa0414670:CDS
AGAAAATAATAGACCAGCAT+GGG 0.528624 3_2:-60337167 Msa0414670:CDS
AAATGGATAGTGGTAAAGAC+AGG 0.529105 3_2:+60332666 None:intergenic
GCACACAATACAAGAACAGC+CGG 0.529568 3_2:+60333461 None:intergenic
AAGATGTGAAGGGTAATGAA+TGG 0.530191 3_2:-60335999 Msa0414670:CDS
AGATGCATTGCATCCAATGT+TGG 0.530925 3_2:-60332964 Msa0414670:CDS
TTCATGAATGGAAGAAAGGG+TGG 0.533771 3_2:-60340293 Msa0414670:CDS
AACGAAGGAGGACTAAATAG+AGG 0.534232 3_2:-60333219 Msa0414670:CDS
GGAAATGAGAATCTTCCATT+GGG 0.534916 3_2:-60335382 Msa0414670:CDS
AGCTCCTGGTCCGTAATCCT+AGG 0.537010 3_2:+60336848 None:intergenic
TTTCTCAACCACGTATTGCT+CGG 0.537803 3_2:-60336919 Msa0414670:CDS
AGATCTCGGCCCTTGATGAA+AGG 0.538168 3_2:+60337009 None:intergenic
CTCCGTTCACCAAATGGTAA+CGG 0.539360 3_2:-60335340 Msa0414670:CDS
GACCCCTTGTATACAGGCCA+TGG 0.540366 3_2:-60335917 Msa0414670:CDS
TTTATGAGTAATGTTGATGA+AGG 0.541550 3_2:-60337379 Msa0414670:CDS
TGGAAATGAGAATCTTCCAT+TGG 0.541952 3_2:-60335383 Msa0414670:CDS
CAGCAGGATGTACGTATTGG+AGG 0.545399 3_2:-60335944 Msa0414670:CDS
CAGGCCATGGATTTACGTGC+TGG 0.546070 3_2:-60335904 Msa0414670:CDS
GACTACAGACGGAAGACTTG+AGG 0.549307 3_2:-60337047 Msa0414670:CDS
GTATCTCCTCCCTTTCATCA+AGG 0.552113 3_2:-60337019 Msa0414670:CDS
GGAGGAAGAAGAGCATCAAC+CGG 0.553613 3_2:+60334062 None:intergenic
TGAGGATACGAGACACTTGT+CGG 0.557378 3_2:-60332992 Msa0414670:CDS
TTTGCTTGGTGAAGATCTCA+AGG 0.562797 3_2:-60332639 None:intergenic
AACTCTTTCCCACCATCTGG+TGG 0.563581 3_2:-60337073 Msa0414670:CDS
CATCGACCCAAAATAATGCA+AGG 0.564184 3_2:-60337435 Msa0414670:CDS
GCCAACCAGTTTGTTGACGA+TGG 0.565303 3_2:+60338829 None:intergenic
TGTGTTCATGAATGGAAGAA+AGG 0.567539 3_2:-60340297 Msa0414670:CDS
TCTTCAGCGCCTCTTCATCT+GGG 0.569422 3_2:-60334835 Msa0414670:intron
CCTCATATTACACACTCTGA+AGG 0.570324 3_2:-60336039 Msa0414670:CDS
TGATTGATGGGTTCTGACAT+TGG 0.570447 3_2:-60340336 Msa0414670:exon
AAAATGTCTGGGATACAAGC+AGG 0.570539 3_2:-60334022 Msa0414670:intron
ATCCTCACCATTAGATTGAG+TGG 0.573526 3_2:+60333008 None:intergenic
AGTGAAAAGAATTTGTCTTG+AGG 0.576891 3_2:-60332898 Msa0414670:exon
TCTGTAGTCTCTCCACCAGA+TGG 0.577437 3_2:+60337061 None:intergenic
TCATGAATGGAAGAAAGGGT+GGG 0.579128 3_2:-60340292 Msa0414670:CDS
GATGGGTTCTGACATTGGTA+TGG 0.579449 3_2:-60340331 Msa0414670:CDS
TAGAAAATAATAGACCAGCA+TGG 0.580283 3_2:-60337168 Msa0414670:CDS
CAGATCTTCATGTTCCGCAC+CGG 0.581032 3_2:-60333895 Msa0414670:CDS
ACTACACATCCACTGTGGAT+AGG 0.582032 3_2:+60338691 None:intergenic
GAACAAAGAAAGAAGAGATG+AGG 0.583288 3_2:-60332941 Msa0414670:CDS
AATAGAGGTCAAGTCGAGGT+TGG 0.584954 3_2:-60333204 Msa0414670:CDS
GGAAGTATAGGACGAGATCT+CGG 0.585045 3_2:+60336995 None:intergenic
AGTAGTGCCATTGTTTGAGA+AGG 0.585604 3_2:-60336298 Msa0414670:CDS
TATCTCCTCCCTTTCATCAA+GGG 0.585643 3_2:-60337018 Msa0414670:CDS
TTTCGTGGTGGCTCCAGCTG+CGG 0.585946 3_2:+60333500 None:intergenic
GACATGTTCGGAAAATGTCT+GGG 0.586198 3_2:-60334033 Msa0414670:CDS
TAGGCCGTCATTCAGGGAAG+GGG 0.586518 3_2:-60337248 Msa0414670:CDS
TTCACATCTTGGACCCGCAA+AGG 0.587006 3_2:+60336012 None:intergenic
CACACGTTGCAAGTACATGT+TGG 0.588233 3_2:+60333405 None:intergenic
GCTCAACTTTGCTTCAAGTG+CGG 0.588515 3_2:-60340249 Msa0414670:CDS
TTTGCGGGTCCAAGATGTGA+AGG 0.588681 3_2:-60336010 Msa0414670:CDS
TTAGGCCGTCATTCAGGGAA+GGG 0.591509 3_2:-60337249 Msa0414670:CDS
TCTCCCAAAAGCTTGTGCTG+AGG 0.591970 3_2:-60336235 Msa0414670:intron
CTTCCCAAACTGTTAAAGAC+CGG 0.592604 3_2:-60336977 Msa0414670:CDS
CATTTGGTTACTGGACCCGC+TGG 0.592726 3_2:-60335283 Msa0414670:CDS
ATCAAATTCCGTAGACACAC+AGG 0.593716 3_2:-60335575 Msa0414670:intron
TCCATCGTCAACAAACTGGT+TGG 0.594004 3_2:-60338830 Msa0414670:CDS
CCCAAACACATATTCAAAGA+CGG 0.594377 3_2:+60337112 None:intergenic
GTAGTCTCTCCACCAGATGG+TGG 0.595253 3_2:+60337064 None:intergenic
TCCGAACATGTCCACTTGGG+AGG 0.595376 3_2:+60334044 None:intergenic
GTTAATACTGAAATGGAGGA+AGG 0.596347 3_2:-60333048 Msa0414670:CDS
AACCGTTAATACTGAAATGG+AGG 0.597180 3_2:-60333052 Msa0414670:CDS
AAATCGCGATGACTCGCAAG+TGG 0.598065 3_2:-60333142 Msa0414670:CDS
ATTTGGTGAACGGAGAAGAT+CGG 0.599027 3_2:+60335348 None:intergenic
GTGTTCATGAATGGAAGAAA+GGG 0.600298 3_2:-60340296 Msa0414670:CDS
ATCACCAGCACGTAAATCCA+TGG 0.602400 3_2:+60335900 None:intergenic
CTCCAGCTGCGGAATCAGCA+GGG 0.603654 3_2:+60333511 None:intergenic
ATCGACCCAAAATAATGCAA+GGG 0.604714 3_2:-60337434 Msa0414670:CDS
GGACTCTTACCCAGATGAAG+AGG 0.605539 3_2:+60334826 None:intergenic
CTGTTCGAGTATCTTGACTT+CGG 0.606779 3_2:-60338658 Msa0414670:CDS
GTTAGGCCGTCATTCAGGGA+AGG 0.607605 3_2:-60337250 Msa0414670:CDS
GTCCAGGGTGAAGGAACAGT+GGG 0.610789 3_2:-60334120 Msa0414670:intron
ATTTAGTCGGATAGATCCTG+GGG 0.615648 3_2:-60335626 Msa0414670:CDS
ACGGTGTCTAGGATGTTTCG+TGG 0.616806 3_2:+60333485 None:intergenic
TAGTCTCTCCACCAGATGGT+GGG 0.617495 3_2:+60337065 None:intergenic
ACCGGACGAGCTGAGCTCAA+GGG 0.618173 3_2:-60333877 Msa0414670:CDS
GGCCACTCAATCTAATGGTG+AGG 0.620775 3_2:-60333010 Msa0414670:CDS
TGAGCTCAGCTCGTCCGGTG+CGG 0.620796 3_2:+60333881 None:intergenic
AGCAGGATGTACGTATTGGA+GGG 0.621631 3_2:-60335943 Msa0414670:CDS
CTCGGCCCTTGATGAAAGGG+AGG 0.622138 3_2:+60337013 None:intergenic
CAATACAAGAACAGCCGGGA+CGG 0.625906 3_2:+60333466 None:intergenic
TATGGAGTTGAGACTTACAT+GGG 0.625949 3_2:-60335128 Msa0414670:CDS
TGTGTACGACCGTGAAGCGT+CGG 0.626839 3_2:-60333386 Msa0414670:CDS
GCGAATCCTTTGGAAAACGA+AGG 0.630328 3_2:-60333234 Msa0414670:CDS
TCGGCACAATTACTTCCCAA+TGG 0.636661 3_2:+60335367 None:intergenic
CGTCCAGGGTGAAGGAACAG+TGG 0.639116 3_2:-60334121 Msa0414670:intron
TCGGCTTTAAGCAAACCAGC+GGG 0.639499 3_2:+60335268 None:intergenic
GCCAAGCATTGTCACAATCG+AGG 0.639692 3_2:-60335065 Msa0414670:CDS
GCGAGAGCGTCTAAGCCAGA+AGG 0.639894 3_2:+60333567 None:intergenic
GGGTGGGGTTTACGATCTGG+TGG 0.639993 3_2:-60340276 Msa0414670:CDS
ATCCATGGCCTGTATACAAG+GGG 0.641805 3_2:+60335915 None:intergenic
CCAGGAGGCCGAGCAATACG+TGG 0.643456 3_2:+60336911 None:intergenic
TTCGAGTATCTTGACTTCGG+CGG 0.643639 3_2:-60338655 Msa0414670:CDS
TTCGGCTTTAAGCAAACCAG+CGG 0.645112 3_2:+60335267 None:intergenic
GACGAGTCAGATACCAATGG+TGG 0.646113 3_2:-60333273 Msa0414670:CDS
AATCCTTTGGAAAACGAAGG+AGG 0.647862 3_2:-60333231 Msa0414670:CDS
AATCCATGGCCTGTATACAA+GGG 0.649731 3_2:+60335914 None:intergenic
ATGCTTGGCTTGACACTGGG+CGG 0.650343 3_2:+60335079 None:intergenic
GTATCCCCTTCCCTGAATGA+CGG 0.651045 3_2:+60337244 None:intergenic
AAAGTTAATGACTGAACAGG+CGG 0.651260 3_2:+60337199 None:intergenic
CAGTCCGCTGTCAAAATGAG+CGG 0.652887 3_2:+60337402 None:intergenic
ACATCTGCACATTCTAATGG+CGG 0.654007 3_2:-60335433 Msa0414670:CDS
AGAGTGTAACATTTGCAACA+AGG 0.654770 3_2:-60338805 Msa0414670:intron
ATTAATATGAACCAAAATGG+CGG 0.658414 3_2:-60333081 Msa0414670:CDS
GGTCCAGTAACCAAATGTGA+AGG 0.661076 3_2:+60335289 None:intergenic
CTCAAACAATGGCACTACTG+TGG 0.661874 3_2:+60336302 None:intergenic
AAACATCCTAGACACCGTCC+CGG 0.669264 3_2:-60333480 Msa0414670:CDS
TCTGGTGGAGAGACTACAGA+CGG 0.671314 3_2:-60337058 Msa0414670:CDS
TGTGTTTGGGAAACCCGTCA+GGG 0.671474 3_2:-60337099 Msa0414670:CDS
GCATGCATGAATCAAATGCG+AGG 0.672254 3_2:-60337135 Msa0414670:CDS
CCGTTCACCAAATGGTAACG+GGG 0.672434 3_2:-60335338 Msa0414670:CDS
TTGCGGGTCCAAGATGTGAA+GGG 0.674468 3_2:-60336009 Msa0414670:CDS
AAGTGGGTATGGATTTGATG+AGG 0.678760 3_2:+60340747 None:intergenic
GTGTGCATTCAGCCACCAAG+CGG 0.679152 3_2:-60333444 Msa0414670:CDS
GTTCTGCAGCCTATCCACAG+TGG 0.681151 3_2:-60338700 Msa0414670:intron
CACACAATACAAGAACAGCC+GGG 0.682528 3_2:+60333462 None:intergenic
ACTAAATAGAGGTCAAGTCG+AGG 0.689469 3_2:-60333208 Msa0414670:CDS
GTTGACGAGTCAGATACCAA+TGG 0.701417 3_2:-60333276 Msa0414670:CDS
TGAGTGCCAGTGATGCAGGT+CGG 0.705207 3_2:-60336272 Msa0414670:CDS
GTGTCTAGGATGTTTCGTGG+TGG 0.708007 3_2:+60333488 None:intergenic
TTACCCCTCCCATCACCAGG+AGG 0.730237 3_2:+60336896 None:intergenic
TAGATACTACACATCCACTG+TGG 0.763688 3_2:+60338686 None:intergenic
TTTAGTCGGATAGATCCTGG+GGG 0.790573 3_2:-60335625 Msa0414670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATGATTCTTTATTTTTT+TGG - chr3_2:60333370-60333389 Msa0414670:CDS 10.0%
!! ATTGTAAGTATAAAAATATA+TGG - chr3_2:60333916-60333935 Msa0414670:intron 10.0%
!! CAATTAATATAATCTAAAAA+AGG + chr3_2:60333974-60333993 None:intergenic 10.0%
!! AATTATAAATTTCAGTATAA+AGG + chr3_2:60336701-60336720 None:intergenic 10.0%
!! ATTAATATGATAATAATCAA+CGG + chr3_2:60336813-60336832 None:intergenic 10.0%
!! CTAATAAACAAATAAAAATA+TGG + chr3_2:60338517-60338536 None:intergenic 10.0%
!! TTTACATCAAAAACAATAAA+GGG + chr3_2:60333033-60333052 None:intergenic 15.0%
!! ATTTACATCAAAAACAATAA+AGG + chr3_2:60333034-60333053 None:intergenic 15.0%
!!! TTAGATTCTAATTTTAGTTT+TGG - chr3_2:60333311-60333330 Msa0414670:CDS 15.0%
!!! TAGATTCTAATTTTAGTTTT+GGG - chr3_2:60333312-60333331 Msa0414670:CDS 15.0%
!! ATTAAACAAAAATTAACCAT+AGG + chr3_2:60334964-60334983 None:intergenic 15.0%
!! TAACAACTAATTACTAATAT+TGG - chr3_2:60335590-60335609 Msa0414670:CDS 15.0%
!! TGAACATAATTAGAAAAATA+AGG + chr3_2:60335833-60335852 None:intergenic 15.0%
!!! ACTGAAATTTATAATTTTAG+AGG - chr3_2:60336705-60336724 Msa0414670:intron 15.0%
!!! CTGAAATTTATAATTTTAGA+GGG - chr3_2:60336706-60336725 Msa0414670:intron 15.0%
!!! TTTAAAATTTATGAAGTTTG+TGG - chr3_2:60336959-60336978 Msa0414670:CDS 15.0%
!!! TTTAAAACGAGTTATTAAAT+AGG - chr3_2:60337039-60337058 Msa0414670:CDS 15.0%
!! TTAAAACGAGTTATTAAATA+GGG - chr3_2:60337040-60337059 Msa0414670:CDS 15.0%
!! TGGTTATTGTTTAAATAAAT+AGG - chr3_2:60338037-60338056 Msa0414670:intron 15.0%
!!! CTTGGTTAATGTTTTTTTTT+TGG - chr3_2:60332988-60333007 Msa0414670:CDS 20.0%
!!! AAATTTTGAAACTTTATGCA+TGG - chr3_2:60333050-60333069 Msa0414670:CDS 20.0%
!!! AAATTTGGAATTTTGATTGA+TGG - chr3_2:60333152-60333171 Msa0414670:CDS 20.0%
!!! AATTTGGAATTTTGATTGAT+GGG - chr3_2:60333153-60333172 Msa0414670:CDS 20.0%
!!! AGATTCTAATTTTAGTTTTG+GGG - chr3_2:60333313-60333332 Msa0414670:CDS 20.0%
!!! TTGGATTTTGATAATCTAAT+TGG - chr3_2:60333389-60333408 Msa0414670:CDS 20.0%
!! GATAATCTAATTTAGTCATT+AGG + chr3_2:60333715-60333734 None:intergenic 20.0%
!! ACTAAATTAGATTATCTGAT+AGG - chr3_2:60333719-60333738 Msa0414670:intron 20.0%
!! TATTAAATGCTTAACTGTAT+AGG - chr3_2:60333994-60334013 Msa0414670:intron 20.0%
!! ATCATAAATAAACCATTTGA+TGG + chr3_2:60334144-60334163 None:intergenic 20.0%
!! TCAAATGGTTTATTTATGAT+AGG - chr3_2:60334144-60334163 Msa0414670:intron 20.0%
!! TTAAGTTCTATTTGGATTAA+TGG + chr3_2:60334500-60334519 None:intergenic 20.0%
!! GAATATACTTAAGTTCTATT+TGG + chr3_2:60334508-60334527 None:intergenic 20.0%
!! TAAACTTACCATATTTAGTT+GGG + chr3_2:60334901-60334920 None:intergenic 20.0%
!! TTAAACTTACCATATTTAGT+TGG + chr3_2:60334902-60334921 None:intergenic 20.0%
!!! GTTTCGAAGATTTTTTTTAA+TGG - chr3_2:60335244-60335263 Msa0414670:CDS 20.0%
!! ATGTAAAAATGACAATTTCA+AGG - chr3_2:60335410-60335429 Msa0414670:CDS 20.0%
!! ATAAGTTCTTTATCCAAAAT+GGG + chr3_2:60335463-60335482 None:intergenic 20.0%
!! AATAAGTTCTTTATCCAAAA+TGG + chr3_2:60335464-60335483 None:intergenic 20.0%
!!! ATAATAAGAGCTTTATGTAT+AGG - chr3_2:60335495-60335514 Msa0414670:intron 20.0%
!!! TAATAAGAGCTTTATGTATA+GGG - chr3_2:60335496-60335515 Msa0414670:intron 20.0%
!! TAGTAATTAGTTGTTATGTT+CGG + chr3_2:60335586-60335605 None:intergenic 20.0%
!!! TAAACACTTTTTTTTTGCAA+CGG + chr3_2:60335616-60335635 None:intergenic 20.0%
!!! TTTTTCAGTTTCTATATTCA+TGG + chr3_2:60336555-60336574 None:intergenic 20.0%
!! ATGAATATAGAAACTGAAAA+AGG - chr3_2:60336554-60336573 Msa0414670:intron 20.0%
!! TGAATATAGAAACTGAAAAA+GGG - chr3_2:60336555-60336574 Msa0414670:intron 20.0%
!! TTCTGATTTATATGAAACTT+TGG + chr3_2:60336846-60336865 None:intergenic 20.0%
!!! AATAAGAGCATTTAATTTGA+TGG - chr3_2:60336995-60337014 Msa0414670:CDS 20.0%
!! TAAAGATAAAAAAGGAAACA+CGG + chr3_2:60337329-60337348 None:intergenic 20.0%
!! CATTCAGATAAAGATAAAAA+AGG + chr3_2:60337337-60337356 None:intergenic 20.0%
!!! ACATCTTTACTTTTTGTTTT+TGG - chr3_2:60338001-60338020 Msa0414670:intron 20.0%
!!! TTTTTGGTGAATATGATTAA+TGG - chr3_2:60338017-60338036 Msa0414670:intron 20.0%
!! TTTGTTTATTAGCTATTGTA+AGG - chr3_2:60338525-60338544 Msa0414670:intron 20.0%
!! GTTGCATTCATAATATTATT+TGG - chr3_2:60339740-60339759 Msa0414670:intron 20.0%
!! AAAACTTAGTGATCATATAT+GGG - chr3_2:60340392-60340411 Msa0414670:intron 20.0%
!! CATATTAATATGAACCAAAA+TGG - chr3_2:60340417-60340436 Msa0414670:intron 20.0%
!!! AGTTTGCTTTATTTTTCAAA+AGG - chr3_2:60340691-60340710 Msa0414670:intron 20.0%
!!! GTTTGCTTTATTTTTCAAAA+GGG - chr3_2:60340692-60340711 Msa0414670:intron 20.0%
!!! TTTTTATTCAAGAGTGAAAA+AGG - chr3_2:60340783-60340802 Msa0414670:five_prime_UTR 20.0%
!!! TTTTATTCAAGAGTGAAAAA+GGG - chr3_2:60340784-60340803 Msa0414670:five_prime_UTR 20.0%
! ATTAATGAGTTTGAGGATTA+TGG - chr3_2:60333082-60333101 Msa0414670:CDS 25.0%
! TTAATGAGTTTGAGGATTAT+GGG - chr3_2:60333083-60333102 Msa0414670:CDS 25.0%
!!! AAGTGATTTGATTTTGACTT+TGG - chr3_2:60333109-60333128 Msa0414670:CDS 25.0%
!!! TTTGATTTTGACTTTGGTTT+TGG - chr3_2:60333115-60333134 Msa0414670:CDS 25.0%
!!! TTGATTTTGACTTTGGTTTT+GGG - chr3_2:60333116-60333135 Msa0414670:CDS 25.0%
! CATAGCAAAATCAAAGAAAA+AGG + chr3_2:60333290-60333309 None:intergenic 25.0%
! AGGATCAATGTATCTAATTT+GGG - chr3_2:60333682-60333701 Msa0414670:intron 25.0%
!!! TATTCTGTTGACTGATTTTT+CGG - chr3_2:60333838-60333857 Msa0414670:intron 25.0%
! TTTATACTTACAATGTGTCA+AGG + chr3_2:60333910-60333929 None:intergenic 25.0%
! AGGAAATATATTTGCCATAT+TGG + chr3_2:60333954-60333973 None:intergenic 25.0%
!! TTTTAGATACTTCCATCAAA+TGG - chr3_2:60334129-60334148 Msa0414670:intron 25.0%
!! AAAACCAAAAGTATAAGAGA+AGG + chr3_2:60334549-60334568 None:intergenic 25.0%
! AAATACTTCCCAACTAAATA+TGG - chr3_2:60334890-60334909 Msa0414670:intron 25.0%
! AATGGGAAAAAAAATCAACA+GGG + chr3_2:60334936-60334955 None:intergenic 25.0%
! AAATGGGAAAAAAAATCAAC+AGG + chr3_2:60334937-60334956 None:intergenic 25.0%
! ATTAACCATAGGTTACAAAT+GGG + chr3_2:60334953-60334972 None:intergenic 25.0%
! AATTAACCATAGGTTACAAA+TGG + chr3_2:60334954-60334973 None:intergenic 25.0%
! TATCACTAAAATAATCACGA+AGG + chr3_2:60335110-60335129 None:intergenic 25.0%
!!! TCGTGATTATTTTAGTGATA+TGG - chr3_2:60335110-60335129 Msa0414670:CDS 25.0%
! TTGTGAGTTGTATCAAAATT+TGG - chr3_2:60335142-60335161 Msa0414670:CDS 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr3_2:60335162-60335181 Msa0414670:CDS 25.0%
!! TTTGTGTTATTACGTTTACT+TGG - chr3_2:60335279-60335298 Msa0414670:CDS 25.0%
! AGTAATTAGTTGTTATGTTC+GGG + chr3_2:60335585-60335604 None:intergenic 25.0%
! GTAATACTGAAAATCCTAAA+TGG - chr3_2:60336036-60336055 Msa0414670:CDS 25.0%
!! AATATCCCTTGCATTATTTT+GGG + chr3_2:60336075-60336094 None:intergenic 25.0%
!! TTTATGAGTAATGTTGATGA+AGG - chr3_2:60336122-60336141 Msa0414670:intron 25.0%
!! GATGTAATCATGTTGTTTAT+CGG + chr3_2:60336209-60336228 None:intergenic 25.0%
! AACAACATGATTACATCTAA+TGG - chr3_2:60336212-60336231 Msa0414670:intron 25.0%
! ACAACATGATTACATCTAAT+GGG - chr3_2:60336213-60336232 Msa0414670:intron 25.0%
! GATTTATATGAAACTTTGGA+TGG + chr3_2:60336842-60336861 None:intergenic 25.0%
! ATTAAATGCTCTTATTGAGT+AGG + chr3_2:60336991-60337010 None:intergenic 25.0%
! AGAACTATAAATTATGAGCA+GGG + chr3_2:60337102-60337121 None:intergenic 25.0%
! AAGAACTATAAATTATGAGC+AGG + chr3_2:60337103-60337122 None:intergenic 25.0%
! TATCTTTATCTGAATGAGTA+TGG - chr3_2:60337341-60337360 Msa0414670:CDS 25.0%
! GTAACAGATCAATTCTATAA+GGG + chr3_2:60337738-60337757 None:intergenic 25.0%
! TGTAACAGATCAATTCTATA+AGG + chr3_2:60337739-60337758 None:intergenic 25.0%
! ATAATTCGAAGAAAATACCA+TGG + chr3_2:60337981-60338000 None:intergenic 25.0%
!!! TAAGCAATCTCTTACTTTTA+AGG + chr3_2:60338337-60338356 None:intergenic 25.0%
! AAAAGTAAGAGATTGCTTAT+TGG - chr3_2:60338338-60338357 Msa0414670:intron 25.0%
!!! TATTGGTAATGATGATTCTA+TGG - chr3_2:60338355-60338374 Msa0414670:intron 25.0%
! GAATGTAAACTGATATAGTT+TGG - chr3_2:60338551-60338570 Msa0414670:intron 25.0%
! ATCCAAATATGCAAAAAGTT+TGG + chr3_2:60338699-60338718 None:intergenic 25.0%
!! AACTTTTTGCATATTTGGAT+TGG - chr3_2:60338699-60338718 Msa0414670:intron 25.0%
!! TTTTCATAAACTCTCATGTA+GGG + chr3_2:60338833-60338852 None:intergenic 25.0%
! TATTCTAGATACAACTAACA+TGG + chr3_2:60339030-60339049 None:intergenic 25.0%
! TATAAGTGCTTATGTATGAT+TGG - chr3_2:60339068-60339087 Msa0414670:intron 25.0%
!! AACTGTTTTCGGATTATTAT+AGG + chr3_2:60339174-60339193 None:intergenic 25.0%
!!! TTTTGAAAATTCCGTGAAAA+CGG + chr3_2:60339207-60339226 None:intergenic 25.0%
!! TAAGTTGAAATAAGCTCTTT+CGG - chr3_2:60339255-60339274 Msa0414670:intron 25.0%
! GGTAATACTGGTATTATTAA+TGG + chr3_2:60339509-60339528 None:intergenic 25.0%
!!! AATCTTTTGAAATCTAGCAA+AGG - chr3_2:60339655-60339674 Msa0414670:intron 25.0%
! CAAAGATCTTATCAAAAACA+CGG + chr3_2:60339695-60339714 None:intergenic 25.0%
! CAAAACTTAGTGATCATATA+TGG - chr3_2:60340391-60340410 Msa0414670:intron 25.0%
! ATTAATATGAACCAAAATGG+CGG - chr3_2:60340420-60340439 Msa0414670:intron 25.0%
!!! AAAAATTCTAGCTCAAACAA+GGG + chr3_2:60340641-60340660 None:intergenic 25.0%
!!! TAAAAATTCTAGCTCAAACA+AGG + chr3_2:60340642-60340661 None:intergenic 25.0%
! TTTATTCAAGAGTGAAAAAG+GGG - chr3_2:60340785-60340804 Msa0414670:five_prime_UTR 25.0%
! AGCAAAAATAAAATGGATAG+TGG + chr3_2:60340848-60340867 None:intergenic 25.0%
!!! CTATCCATTTTATTTTTGCT+TGG - chr3_2:60340848-60340867 Msa0414670:five_prime_UTR 25.0%
! TTCACCAAGCAAAAATAAAA+TGG + chr3_2:60340855-60340874 None:intergenic 25.0%
! AACCTAGGATTTAGGATAAT+GGG + chr3_2:60332936-60332955 None:intergenic 30.0%
! AAACCTAGGATTTAGGATAA+TGG + chr3_2:60332937-60332956 None:intergenic 30.0%
GTGAGTTATTAATGAGTTTG+AGG - chr3_2:60333075-60333094 Msa0414670:CDS 30.0%
!! GGTATTTTTCAGCTGAAATT+TGG - chr3_2:60333137-60333156 Msa0414670:CDS 30.0%
TATATCCTTTCTTACCATTC+CGG - chr3_2:60333428-60333447 Msa0414670:CDS 30.0%
TATGTTGTGATTGTGTATTG+TGG - chr3_2:60333613-60333632 Msa0414670:CDS 30.0%
GAGGATCAATGTATCTAATT+TGG - chr3_2:60333681-60333700 Msa0414670:intron 30.0%
! GGTAATTTTAGATGCCAATA+TGG - chr3_2:60333937-60333956 Msa0414670:intron 30.0%
ATCCAGTCAACTTAATTAAG+AGG - chr3_2:60334059-60334078 Msa0414670:CDS 30.0%
TCCAGTCAACTTAATTAAGA+GGG - chr3_2:60334060-60334079 Msa0414670:CDS 30.0%
! CTTGCAATTTTGCAAATACA+GGG + chr3_2:60334455-60334474 None:intergenic 30.0%
! TCTTCCTTCTCTTATACTTT+TGG - chr3_2:60334542-60334561 Msa0414670:intron 30.0%
CAAAAAACTGAACTCTCAAA+GGG + chr3_2:60334643-60334662 None:intergenic 30.0%
ACAAAAAACTGAACTCTCAA+AGG + chr3_2:60334644-60334663 None:intergenic 30.0%
TCATTGAAATCTGTTTGACT+TGG - chr3_2:60334779-60334798 Msa0414670:intron 30.0%
! TTTTTCCCATTTGTAACCTA+TGG - chr3_2:60334945-60334964 Msa0414670:intron 30.0%
CGTAATAACACAAAAATTGC+TGG + chr3_2:60335273-60335292 None:intergenic 30.0%
!! TTACTTGGCTTTTGAATGTA+TGG - chr3_2:60335294-60335313 Msa0414670:CDS 30.0%
!! TACTTGGCTTTTGAATGTAT+GGG - chr3_2:60335295-60335314 Msa0414670:CDS 30.0%
AAAAAGCTGAATACAGACTA+TGG - chr3_2:60335713-60335732 Msa0414670:intron 30.0%
AAACTGTTAAAGAGAGCTTA+AGG + chr3_2:60335765-60335784 None:intergenic 30.0%
!!! ATTATTTTGGGTCGATGAAA+CGG + chr3_2:60336063-60336082 None:intergenic 30.0%
! GAATATCCCTTGCATTATTT+TGG + chr3_2:60336076-60336095 None:intergenic 30.0%
GGAAAAACAATCAAGAAGTT+AGG - chr3_2:60336234-60336253 Msa0414670:intron 30.0%
! TGGTCTATTATTTTCTAACG+TGG + chr3_2:60336330-60336349 None:intergenic 30.0%
TAGAAAATAATAGACCAGCA+TGG - chr3_2:60336333-60336352 Msa0414670:intron 30.0%
AGAAAATAATAGACCAGCAT+GGG - chr3_2:60336334-60336353 Msa0414670:intron 30.0%
! TTTAACAGTTTGGGAAGTAT+AGG + chr3_2:60336521-60336540 None:intergenic 30.0%
CAGTTTCTATATTCATGGTA+AGG + chr3_2:60336550-60336569 None:intergenic 30.0%
ATCAGTTACTTCCTAGATAT+TGG - chr3_2:60336630-60336649 Msa0414670:intron 30.0%
TAGCTATGTAATATGACAAC+TGG - chr3_2:60336871-60336890 Msa0414670:CDS 30.0%
CGTCAAATTGATGCATAATA+AGG + chr3_2:60336915-60336934 None:intergenic 30.0%
! GACGTTACTTTATGAAGTAT+CGG - chr3_2:60336931-60336950 Msa0414670:CDS 30.0%
! ACGTTACTTTATGAAGTATC+GGG - chr3_2:60336932-60336951 Msa0414670:CDS 30.0%
!! AGAGCATTTAATTTGATGGT+TGG - chr3_2:60336999-60337018 Msa0414670:CDS 30.0%
AACTGTTATCGTTACATCAA+GGG + chr3_2:60337173-60337192 None:intergenic 30.0%
AAACTGTTATCGTTACATCA+AGG + chr3_2:60337174-60337193 None:intergenic 30.0%
CGAAAAACAACTACAGAAAT+TGG + chr3_2:60337369-60337388 None:intergenic 30.0%
! GGACTTTTCAATTCAGATTT+TGG - chr3_2:60337523-60337542 Msa0414670:intron 30.0%
! CTTTTGCAGTTACATTTAGT+CGG - chr3_2:60337862-60337881 Msa0414670:intron 30.0%
AAATACCATGGACAGTAAAA+TGG + chr3_2:60337969-60337988 None:intergenic 30.0%
AATGACATGCAATAATTCAC+TGG - chr3_2:60338265-60338284 Msa0414670:intron 30.0%
!!! TCTCTGAAGCTGAATTTTTT+TGG + chr3_2:60338292-60338311 None:intergenic 30.0%
AACTGTGCTACATTTCATTT+AGG - chr3_2:60338616-60338635 Msa0414670:CDS 30.0%
TTGTTCTCTTTCCAAAAACT+GGG + chr3_2:60338646-60338665 None:intergenic 30.0%
ATTGTTCTCTTTCCAAAAAC+TGG + chr3_2:60338647-60338666 None:intergenic 30.0%
! GTCCAAACTTTTTGCATATT+TGG - chr3_2:60338694-60338713 Msa0414670:CDS 30.0%
! GTTTTCATAAACTCTCATGT+AGG + chr3_2:60338834-60338853 None:intergenic 30.0%
TGCTCATGTATAAGCTATTT+CGG + chr3_2:60338907-60338926 None:intergenic 30.0%
ATTAAGCTGTGTTTACAAAC+AGG - chr3_2:60338946-60338965 Msa0414670:intron 30.0%
TTAAGCTGTGTTTACAAACA+GGG - chr3_2:60338947-60338966 Msa0414670:intron 30.0%
AGCTGTTCGAAGAAATTTAT+AGG + chr3_2:60338981-60339000 None:intergenic 30.0%
!!! ATGACAGTTTGATTTTTTCC+TGG - chr3_2:60339002-60339021 Msa0414670:intron 30.0%
CTATAGTTGAAGAGAAAATG+AGG - chr3_2:60339094-60339113 Msa0414670:intron 30.0%
! GCTTACTCATAAACTGTTTT+CGG + chr3_2:60339185-60339204 None:intergenic 30.0%
TATTGCATAACATAATCACG+TGG + chr3_2:60339237-60339256 None:intergenic 30.0%
TGAAGCATAAATAGGATCAA+AGG + chr3_2:60339286-60339305 None:intergenic 30.0%
TGCTTTCATGAAGCATAAAT+AGG + chr3_2:60339294-60339313 None:intergenic 30.0%
!! TTATGCTTCATGAAAGCATT+TGG - chr3_2:60339296-60339315 Msa0414670:intron 30.0%
! TTGGAATTATCATGATGATG+TGG - chr3_2:60339315-60339334 Msa0414670:intron 30.0%
! AATGTGATGATTGCTCTAAA+TGG - chr3_2:60339407-60339426 Msa0414670:intron 30.0%
!!! TACCAGTATTACCACTTTTT+TGG - chr3_2:60339516-60339535 Msa0414670:intron 30.0%
TTCCAAAAAAGTGGTAATAC+TGG + chr3_2:60339521-60339540 None:intergenic 30.0%
TGGTCTAAATTCCAAAAAAG+TGG + chr3_2:60339530-60339549 None:intergenic 30.0%
TATTATTATACTCACCAGAG+AGG + chr3_2:60339818-60339837 None:intergenic 30.0%
TAATAATTCCTGAATCCTTC+TGG - chr3_2:60339839-60339858 Msa0414670:intron 30.0%
! CAAGAGATTTTCTCCTAAAA+CGG + chr3_2:60339968-60339987 None:intergenic 30.0%
!!! GTTTTAGGAGAAAATCTCTT+GGG - chr3_2:60339967-60339986 Msa0414670:intron 30.0%
!!! GTTGTGAATGTGTTCTTTTT+TGG + chr3_2:60340202-60340221 None:intergenic 30.0%
ATTTCAGTATTAACGGTTCT+TGG + chr3_2:60340447-60340466 None:intergenic 30.0%
AAGAACCGTTAATACTGAAA+TGG - chr3_2:60340446-60340465 Msa0414670:intron 30.0%
TTCCTCCATTTCAGTATTAA+CGG + chr3_2:60340454-60340473 None:intergenic 30.0%
AGTGAAAAGAATTTGTCTTG+AGG - chr3_2:60340603-60340622 Msa0414670:intron 30.0%
TTATTCAAGAGTGAAAAAGG+GGG - chr3_2:60340786-60340805 Msa0414670:five_prime_UTR 30.0%
!! TTTTCTCTCTCTAAAAACCC+AGG - chr3_2:60332781-60332800 Msa0414670:three_prime_UTR 35.0%
GTAGAAGAAGAAATTGACCT+GGG + chr3_2:60332801-60332820 None:intergenic 35.0%
TGTAGAAGAAGAAATTGACC+TGG + chr3_2:60332802-60332821 None:intergenic 35.0%
! AATCTAAGACAAGAGCAATG+AGG + chr3_2:60332825-60332844 None:intergenic 35.0%
CAAAAGGAAACCTAGGATTT+AGG + chr3_2:60332944-60332963 None:intergenic 35.0%
! AAATCCTAGGTTTCCTTTTG+TGG - chr3_2:60332944-60332963 Msa0414670:CDS 35.0%
! AATCCTAGGTTTCCTTTTGT+GGG - chr3_2:60332945-60332964 Msa0414670:CDS 35.0%
AATCAAGTCAAAGGTTGTCT+TGG - chr3_2:60332970-60332989 Msa0414670:CDS 35.0%
TCTGACATTGGTATGGTAAA+TGG - chr3_2:60333177-60333196 Msa0414670:CDS 35.0%
TGTGTTCATGAATGGAAGAA+AGG - chr3_2:60333204-60333223 Msa0414670:CDS 35.0%
GTGTTCATGAATGGAAGAAA+GGG - chr3_2:60333205-60333224 Msa0414670:CDS 35.0%
ATATCCTTTCTTACCATTCC+GGG - chr3_2:60333429-60333448 Msa0414670:CDS 35.0%
TGACTAAAATGTGAGCTGTT+TGG + chr3_2:60333489-60333508 None:intergenic 35.0%
TTGTGATTGTGTATTGTGGA+AGG - chr3_2:60333617-60333636 Msa0414670:CDS 35.0%
!! CTTATTGTTGTTTGATGACG+AGG - chr3_2:60333662-60333681 Msa0414670:intron 35.0%
ATTCCTCCATAAATCTAGCA+TGG + chr3_2:60333874-60333893 None:intergenic 35.0%
ATGCTAGATTTATGGAGGAA+TGG - chr3_2:60333873-60333892 Msa0414670:CDS 35.0%
!! TCCCTCTTAATTAAGTTGAC+TGG + chr3_2:60334064-60334083 None:intergenic 35.0%
AGGTGTAGCTCATTAACTAA+TGG + chr3_2:60334289-60334308 None:intergenic 35.0%
TCTAACCAAGAATTGAACTC+AGG + chr3_2:60334334-60334353 None:intergenic 35.0%
CTCATAACCGTAGATTACTA+GGG - chr3_2:60334364-60334383 Msa0414670:intron 35.0%
! GCTTGCAATTTTGCAAATAC+AGG + chr3_2:60334456-60334475 None:intergenic 35.0%
AAATTCCATCGTCAACAAAC+TGG - chr3_2:60334667-60334686 Msa0414670:intron 35.0%
AGAGTGTAACATTTGCAACA+AGG - chr3_2:60334696-60334715 Msa0414670:intron 35.0%
CAAACAGATTTCAATGAGTG+AGG + chr3_2:60334776-60334795 None:intergenic 35.0%
CACACTATTGCATACGATAT+TGG - chr3_2:60335071-60335090 Msa0414670:CDS 35.0%
ATAATCACGAAGGATAATCC+TGG + chr3_2:60335100-60335119 None:intergenic 35.0%
!!! GAAGCTTTTGCTTTAGAACT+TGG - chr3_2:60335437-60335456 Msa0414670:CDS 35.0%
!!! GCTTTTTTCGTAAGATCTCT+AGG + chr3_2:60335700-60335719 None:intergenic 35.0%
GAATACAGACTATGGACAAT+TGG - chr3_2:60335721-60335740 Msa0414670:intron 35.0%
GCTTATTTGAGCTTATCTAC+TGG + chr3_2:60335802-60335821 None:intergenic 35.0%
!!! TTATTTTGGGTCGATGAAAC+GGG + chr3_2:60336062-60336081 None:intergenic 35.0%
ATCGACCCAAAATAATGCAA+GGG - chr3_2:60336067-60336086 Msa0414670:intron 35.0%
AAAGTTAATGACTGAACAGG+CGG + chr3_2:60336305-60336324 None:intergenic 35.0%
GCAAAAGTTAATGACTGAAC+AGG + chr3_2:60336308-60336327 None:intergenic 35.0%
CCCAAACACATATTCAAAGA+CGG + chr3_2:60336392-60336411 None:intergenic 35.0%
CCGTCTTTGAATATGTGTTT+GGG - chr3_2:60336389-60336408 Msa0414670:intron 35.0%
TTCTATATTCATGGTAAGGC+CGG + chr3_2:60336546-60336565 None:intergenic 35.0%
! TAGATATTGGCCTAGGATTA+CGG - chr3_2:60336643-60336662 Msa0414670:intron 35.0%
CAGTGTTTATAATGAGCAAG+TGG + chr3_2:60336774-60336793 None:intergenic 35.0%
AAAAGGAAACACGGAAAACA+AGG + chr3_2:60337320-60337339 None:intergenic 35.0%
CGTGTCTTCAAGCTATAATT+TGG - chr3_2:60337411-60337430 Msa0414670:CDS 35.0%
TGGACTTCTTACAAAATTGC+AGG - chr3_2:60337431-60337450 Msa0414670:CDS 35.0%
ATTCATTACCCTTCACATCT+TGG + chr3_2:60337503-60337522 None:intergenic 35.0%
AAGATGTGAAGGGTAATGAA+TGG - chr3_2:60337502-60337521 Msa0414670:intron 35.0%
! TACATCCTGCTGTTGTTATT+AGG + chr3_2:60337549-60337568 None:intergenic 35.0%
CTCTCAAGTAAGAACAAATG+AGG + chr3_2:60337793-60337812 None:intergenic 35.0%
CTCATTTGTTCTTACTTGAG+AGG - chr3_2:60337791-60337810 Msa0414670:intron 35.0%
! CAAAACCATTTTACTGTCCA+TGG - chr3_2:60337961-60337980 Msa0414670:intron 35.0%
TCTACATCTGCACATTCTAA+TGG - chr3_2:60338065-60338084 Msa0414670:intron 35.0%
ATTCTCATTTCCACCAGAAA+AGG + chr3_2:60338111-60338130 None:intergenic 35.0%
TGGAAATGAGAATCTTCCAT+TGG - chr3_2:60338118-60338137 Msa0414670:intron 35.0%
GGAAATGAGAATCTTCCATT+GGG - chr3_2:60338119-60338138 Msa0414670:intron 35.0%
AGTAACCAAATGTGAAGGTT+CGG + chr3_2:60338210-60338229 None:intergenic 35.0%
AAGAAGAGGACTCGAAATAT+TGG - chr3_2:60338311-60338330 Msa0414670:intron 35.0%
TATGGAGTTGAGACTTACAT+GGG - chr3_2:60338373-60338392 Msa0414670:intron 35.0%
CATGTTCGAATTATATCACG+TGG - chr3_2:60338579-60338598 Msa0414670:intron 35.0%
TGTTCTCTTTCCAAAAACTG+GGG + chr3_2:60338645-60338664 None:intergenic 35.0%
TCTGCATAAGCTTGTATATG+TGG - chr3_2:60339123-60339142 Msa0414670:intron 35.0%
!! TTATGAGTAAGCCGTTTTCA+CGG - chr3_2:60339193-60339212 Msa0414670:intron 35.0%
TATGTCAACTATTTCGTCCA+GGG - chr3_2:60339366-60339385 Msa0414670:intron 35.0%
CTCTAAATGGAGAAAGTTAC+CGG - chr3_2:60339420-60339439 Msa0414670:intron 35.0%
TCACTATCTCATATGAAGAC+TGG + chr3_2:60339550-60339569 None:intergenic 35.0%
TTATCAAAAACACGGACAGA+AGG + chr3_2:60339687-60339706 None:intergenic 35.0%
AAATGTAACCAGAAGGATTC+AGG + chr3_2:60339850-60339869 None:intergenic 35.0%
! TGAATCCTTCTGGTTACATT+TGG - chr3_2:60339849-60339868 Msa0414670:intron 35.0%
!! TCACAGATTTTAAGAAGCGA+CGG - chr3_2:60339875-60339894 Msa0414670:intron 35.0%
!!! CGTTTTAGGAGAAAATCTCT+TGG - chr3_2:60339966-60339985 Msa0414670:intron 35.0%
!!! GTGAATGTGTTCTTTTTTGG+CGG + chr3_2:60340199-60340218 None:intergenic 35.0%
AACCGTTAATACTGAAATGG+AGG - chr3_2:60340449-60340468 Msa0414670:intron 35.0%
GTTAATACTGAAATGGAGGA+AGG - chr3_2:60340453-60340472 Msa0414670:intron 35.0%
TCTTTCTTTGTTCCCAACAT+TGG + chr3_2:60340553-60340572 None:intergenic 35.0%
GAACAAAGAAAGAAGAGATG+AGG - chr3_2:60340560-60340579 Msa0414670:intron 35.0%
! AAATGGATAGTGGTAAAGAC+AGG + chr3_2:60340838-60340857 None:intergenic 35.0%
AAGTGGGTATGGATTTGATG+AGG + chr3_2:60332757-60332776 None:intergenic 40.0%
AGAGAGAGAAAACGTGAAGT+GGG + chr3_2:60332773-60332792 None:intergenic 40.0%
TAGAGAGAGAAAACGTGAAG+TGG + chr3_2:60332774-60332793 None:intergenic 40.0%
GACCCATTATCCTAAATCCT+AGG - chr3_2:60332931-60332950 Msa0414670:CDS 40.0%
TGACTTGATTCACCCACAAA+AGG + chr3_2:60332960-60332979 None:intergenic 40.0%
TTGTGGGTGAATCAAGTCAA+AGG - chr3_2:60332961-60332980 Msa0414670:CDS 40.0%
!! TGATTGATGGGTTCTGACAT+TGG - chr3_2:60333165-60333184 Msa0414670:CDS 40.0%
ATGGTTCGTGTGTTCATGAA+TGG - chr3_2:60333196-60333215 Msa0414670:CDS 40.0%
TTCATGAATGGAAGAAAGGG+TGG - chr3_2:60333208-60333227 Msa0414670:CDS 40.0%
TCATGAATGGAAGAAAGGGT+GGG - chr3_2:60333209-60333228 Msa0414670:CDS 40.0%
AAATCCCGGAATGGTAAGAA+AGG + chr3_2:60333436-60333455 None:intergenic 40.0%
CAAACACAACCAGAAAATCC+CGG + chr3_2:60333450-60333469 None:intergenic 40.0%
TTGTGTATTGTGGAAGGAGT+AGG - chr3_2:60333623-60333642 Msa0414670:CDS 40.0%
TATTGTGGAAGGAGTAGGAA+TGG - chr3_2:60333628-60333647 Msa0414670:intron 40.0%
ATTGTGGAAGGAGTAGGAAT+GGG - chr3_2:60333629-60333648 Msa0414670:intron 40.0%
TTCCTGCCATGCTAGATTTA+TGG - chr3_2:60333865-60333884 Msa0414670:CDS 40.0%
TTTATGGAGGAATGGAAGAG+TGG - chr3_2:60333881-60333900 Msa0414670:CDS 40.0%
GGATCACATATCACACACAA+GGG + chr3_2:60334043-60334062 None:intergenic 40.0%
TGGATCACATATCACACACA+AGG + chr3_2:60334044-60334063 None:intergenic 40.0%
AATCACTTGGTTAGGTAGTG+TGG + chr3_2:60334261-60334280 None:intergenic 40.0%
ACTAATGGAGCTCAATCACT+TGG + chr3_2:60334274-60334293 None:intergenic 40.0%
GAGAACCTGAGTTCAATTCT+TGG - chr3_2:60334326-60334345 Msa0414670:intron 40.0%
CCTAGTAATCTACGGTTATG+AGG + chr3_2:60334366-60334385 None:intergenic 40.0%
CCTCATAACCGTAGATTACT+AGG - chr3_2:60334363-60334382 Msa0414670:intron 40.0%
AGAGAAGGAAGATATGAGCA+GGG + chr3_2:60334534-60334553 None:intergenic 40.0%
AAGAGAAGGAAGATATGAGC+AGG + chr3_2:60334535-60334554 None:intergenic 40.0%
TAGATACTACACATCCACTG+TGG + chr3_2:60334818-60334837 None:intergenic 40.0%
CTGTTCGAGTATCTTGACTT+CGG - chr3_2:60334843-60334862 Msa0414670:CDS 40.0%
ACGACTTGTCCTAATAAGTG+GGG + chr3_2:60335211-60335230 None:intergenic 40.0%
CACGACTTGTCCTAATAAGT+GGG + chr3_2:60335212-60335231 None:intergenic 40.0%
!!! CTTTAGAACTTGGCCCATTT+TGG - chr3_2:60335447-60335466 Msa0414670:intron 40.0%
! AGAGCTTTATGTATAGGGAG+AGG - chr3_2:60335501-60335520 Msa0414670:intron 40.0%
! GAGCTTTATGTATAGGGAGA+GGG - chr3_2:60335502-60335521 Msa0414670:intron 40.0%
! AGCTTTATGTATAGGGAGAG+GGG - chr3_2:60335503-60335522 Msa0414670:intron 40.0%
! AATTATTGCTGCTTGCTCGT+TGG - chr3_2:60335856-60335875 Msa0414670:intron 40.0%
TCTTTAGTTGCTCTTAGCCT+TGG - chr3_2:60335882-60335901 Msa0414670:intron 40.0%
ACTGCACTAACAGAATACCA+AGG + chr3_2:60335902-60335921 None:intergenic 40.0%
CATCGACCCAAAATAATGCA+AGG - chr3_2:60336066-60336085 Msa0414670:intron 40.0%
TTATCGGAGCATGACTCATA+TGG + chr3_2:60336193-60336212 None:intergenic 40.0%
! ATGCTTTTAATCTCCCATGC+TGG + chr3_2:60336350-60336369 None:intergenic 40.0%
GCCGTCTTTGAATATGTGTT+TGG - chr3_2:60336388-60336407 Msa0414670:intron 40.0%
TATCTCCTCCCTTTCATCAA+GGG - chr3_2:60336483-60336502 Msa0414670:intron 40.0%
CTTCCCAAACTGTTAAAGAC+CGG - chr3_2:60336524-60336543 Msa0414670:intron 40.0%
TTTCTCAACCACGTATTGCT+CGG - chr3_2:60336582-60336601 Msa0414670:intron 40.0%
! TACTTCCTAGATATTGGCCT+AGG - chr3_2:60336636-60336655 Msa0414670:intron 40.0%
GTAATCCTAGGCCAATATCT+AGG + chr3_2:60336644-60336663 None:intergenic 40.0%
ACTAAGCTCAGAGTTAACCT+TGG - chr3_2:60337065-60337084 Msa0414670:CDS 40.0%
! AGTAGTGCCATTGTTTGAGA+AGG - chr3_2:60337203-60337222 Msa0414670:CDS 40.0%
! AAACCTCAGCACAAGCTTTT+GGG + chr3_2:60337272-60337291 None:intergenic 40.0%
CCTTCAGAGTGTGTAATATG+AGG + chr3_2:60337465-60337484 None:intergenic 40.0%
CCTCATATTACACACTCTGA+AGG - chr3_2:60337462-60337481 Msa0414670:CDS 40.0%
TTTGGCCTAATAACAACAGC+AGG - chr3_2:60337541-60337560 Msa0414670:intron 40.0%
AATCCATGGCCTGTATACAA+GGG + chr3_2:60337590-60337609 None:intergenic 40.0%
AAATCCATGGCCTGTATACA+AGG + chr3_2:60337591-60337610 None:intergenic 40.0%
ACATTTAGTCGGATAGATCC+TGG - chr3_2:60337873-60337892 Msa0414670:intron 40.0%
CATTTAGTCGGATAGATCCT+GGG - chr3_2:60337874-60337893 Msa0414670:intron 40.0%
ATTTAGTCGGATAGATCCTG+GGG - chr3_2:60337875-60337894 Msa0414670:intron 40.0%
ATCAAATTCCGTAGACACAC+AGG - chr3_2:60337926-60337945 Msa0414670:intron 40.0%
ACATCTGCACATTCTAATGG+CGG - chr3_2:60338068-60338087 Msa0414670:intron 40.0%
! ATTTGGTGAACGGAGAAGAT+CGG + chr3_2:60338156-60338175 None:intergenic 40.0%
GTAACCAAATGTGAAGGTTC+GGG + chr3_2:60338209-60338228 None:intergenic 40.0%
GAACCTTCACATTTGGTTAC+TGG - chr3_2:60338209-60338228 Msa0414670:intron 40.0%
! GGTTTGCTTAAAGCCGAAAA+TGG - chr3_2:60338239-60338258 Msa0414670:intron 40.0%
!! GCATGTCATTTCGCCATTTT+CGG + chr3_2:60338255-60338274 None:intergenic 40.0%
ATTCAGCTTCAGAGAAGAAG+AGG - chr3_2:60338297-60338316 Msa0414670:intron 40.0%
CTATGGAGTTGAGACTTACA+TGG - chr3_2:60338372-60338391 Msa0414670:intron 40.0%
! ATTTAGGAACCCCCAGTTTT+TGG - chr3_2:60338632-60338651 Msa0414670:CDS 40.0%
GTTCTCTTTCCAAAAACTGG+GGG + chr3_2:60338644-60338663 None:intergenic 40.0%
GATACAACTAACATGGATCC+AGG + chr3_2:60339023-60339042 None:intergenic 40.0%
CATAACATAATCACGTGGCA+CGG + chr3_2:60339232-60339251 None:intergenic 40.0%
GTATGTCAACTATTTCGTCC+AGG - chr3_2:60339365-60339384 Msa0414670:intron 40.0%
! TTTTCCGAACATGTCCACTT+GGG + chr3_2:60339463-60339482 None:intergenic 40.0%
! ATTTTCCGAACATGTCCACT+TGG + chr3_2:60339464-60339483 None:intergenic 40.0%
GACATGTTCGGAAAATGTCT+GGG - chr3_2:60339468-60339487 Msa0414670:intron 40.0%
! AAAATGTCTGGGATACAAGC+AGG - chr3_2:60339479-60339498 Msa0414670:intron 40.0%
ATGCTGATGCTGACACAATT+CGG + chr3_2:60339771-60339790 None:intergenic 40.0%
CTTATTCTGTTTGTCCTCTC+TGG - chr3_2:60339801-60339820 Msa0414670:intron 40.0%
GAACACCAAATGTAACCAGA+AGG + chr3_2:60339857-60339876 None:intergenic 40.0%
TTCTCCTAAAACGGCTAAAC+TGG + chr3_2:60339959-60339978 None:intergenic 40.0%
!!! AATGTGTTCTTTTTTGGCGG+CGG + chr3_2:60340196-60340215 None:intergenic 40.0%
AAGAGAAGTTGCGAATCCTT+TGG - chr3_2:60340257-60340276 Msa0414670:CDS 40.0%
! AATCCTTTGGAAAACGAAGG+AGG - chr3_2:60340270-60340289 Msa0414670:CDS 40.0%
AACGAAGGAGGACTAAATAG+AGG - chr3_2:60340282-60340301 Msa0414670:CDS 40.0%
ACTAAATAGAGGTCAAGTCG+AGG - chr3_2:60340293-60340312 Msa0414670:CDS 40.0%
GGAAGGTCAACATTCTTCTT+TGG - chr3_2:60340470-60340489 Msa0414670:intron 40.0%
TCTTTGGCCACTCAATCTAA+TGG - chr3_2:60340486-60340505 Msa0414670:intron 40.0%
ATCCTCACCATTAGATTGAG+TGG + chr3_2:60340496-60340515 None:intergenic 40.0%
AGATGCATTGCATCCAATGT+TGG - chr3_2:60340537-60340556 Msa0414670:intron 40.0%
GATGCATTGCATCCAATGTT+GGG - chr3_2:60340538-60340557 Msa0414670:intron 40.0%
GAGAAAACGTGAAGTGGGTA+TGG + chr3_2:60332768-60332787 None:intergenic 45.0%
TCACCCACAAAAGGAAACCT+AGG + chr3_2:60332951-60332970 None:intergenic 45.0%
! GATGGGTTCTGACATTGGTA+TGG - chr3_2:60333170-60333189 Msa0414670:CDS 45.0%
CATGAATGGAAGAAAGGGTG+GGG - chr3_2:60333210-60333229 Msa0414670:CDS 45.0%
GCTCAACTTTGCTTCAAGTG+CGG - chr3_2:60333252-60333271 Msa0414670:CDS 45.0%
CTCAACTTTGCTTCAAGTGC+GGG - chr3_2:60333253-60333272 Msa0414670:CDS 45.0%
! CTTACCATTCCGGGATTTTC+TGG - chr3_2:60333438-60333457 Msa0414670:CDS 45.0%
ACAACCAGAAAATCCCGGAA+TGG + chr3_2:60333445-60333464 None:intergenic 45.0%
CTCCATAAATCTAGCATGGC+AGG + chr3_2:60333870-60333889 None:intergenic 45.0%
CTGCCATGCTAGATTTATGG+AGG - chr3_2:60333868-60333887 Msa0414670:CDS 45.0%
TGGAGCTCAATCACTTGGTT+AGG + chr3_2:60334269-60334288 None:intergenic 45.0%
!! AAGGGTGCCCTAGTAATCTA+CGG + chr3_2:60334374-60334393 None:intergenic 45.0%
GTACACATTACAGAGCAGTG+TGG + chr3_2:60334433-60334452 None:intergenic 45.0%
GAGAAGGAAGATATGAGCAG+GGG + chr3_2:60334533-60334552 None:intergenic 45.0%
TCCATCGTCAACAAACTGGT+TGG - chr3_2:60334671-60334690 Msa0414670:intron 45.0%
ACTACACATCCACTGTGGAT+AGG + chr3_2:60334813-60334832 None:intergenic 45.0%
TTCGAGTATCTTGACTTCGG+CGG - chr3_2:60334846-60334865 Msa0414670:CDS 45.0%
TATCTTGACTTCGGCGGTAT+AGG - chr3_2:60334852-60334871 Msa0414670:CDS 45.0%
ATCACGAAGGATAATCCTGG+TGG + chr3_2:60335097-60335116 None:intergenic 45.0%
TTGTCCTAATAAGTGGGGTC+GGG + chr3_2:60335206-60335225 None:intergenic 45.0%
CTTGTCCTAATAAGTGGGGT+CGG + chr3_2:60335207-60335226 None:intergenic 45.0%
CCACGACTTGTCCTAATAAG+TGG + chr3_2:60335213-60335232 None:intergenic 45.0%
CCACTTATTAGGACAAGTCG+TGG - chr3_2:60335210-60335229 Msa0414670:CDS 45.0%
CTTATTAGGACAAGTCGTGG+TGG - chr3_2:60335213-60335232 Msa0414670:CDS 45.0%
! TGGCTTTTGAATGTATGGGC+TGG - chr3_2:60335299-60335318 Msa0414670:CDS 45.0%
! GGCTTTTGAATGTATGGGCT+GGG - chr3_2:60335300-60335319 Msa0414670:CDS 45.0%
!! GCTTTTGAATGTATGGGCTG+GGG - chr3_2:60335301-60335320 Msa0414670:CDS 45.0%
GCTTTATGTATAGGGAGAGG+GGG - chr3_2:60335504-60335523 Msa0414670:intron 45.0%
CTTTATGTATAGGGAGAGGG+GGG - chr3_2:60335505-60335524 Msa0414670:intron 45.0%
! TGGGTTGAGCTAAGGGTTAA+AGG - chr3_2:60335538-60335557 Msa0414670:intron 45.0%
GAGCTAAGGGTTAAAGGAGT+TGG - chr3_2:60335544-60335563 Msa0414670:intron 45.0%
CTAAGGGTTAAAGGAGTTGG+AGG - chr3_2:60335547-60335566 Msa0414670:intron 45.0%
!! CATTCCGCTCATTTTGACAG+CGG - chr3_2:60336095-60336114 Msa0414670:intron 45.0%
AAGAAGTTAGGCCGTCATTC+AGG - chr3_2:60336246-60336265 Msa0414670:CDS 45.0%
AGAAGTTAGGCCGTCATTCA+GGG - chr3_2:60336247-60336266 Msa0414670:CDS 45.0%
GCATGCATGAATCAAATGCG+AGG - chr3_2:60336366-60336385 Msa0414670:intron 45.0%
AACAACTCTTTCCCACCATC+TGG - chr3_2:60336425-60336444 Msa0414670:intron 45.0%
ACTACAGACGGAAGACTTGA+GGG - chr3_2:60336455-60336474 Msa0414670:intron 45.0%
GTATCTCCTCCCTTTCATCA+AGG - chr3_2:60336482-60336501 Msa0414670:intron 45.0%
! GGAAGTATAGGACGAGATCT+CGG + chr3_2:60336509-60336528 None:intergenic 45.0%
AGGCCGGTCTTTAACAGTTT+GGG + chr3_2:60336530-60336549 None:intergenic 45.0%
AAGGCCGGTCTTTAACAGTT+TGG + chr3_2:60336531-60336550 None:intergenic 45.0%
GGGCAAGATCAAGATACTCT+AGG - chr3_2:60336726-60336745 Msa0414670:intron 45.0%
CTCAAACAATGGCACTACTG+TGG + chr3_2:60337202-60337221 None:intergenic 45.0%
CTCAGCACCTTCTCAAACAA+TGG + chr3_2:60337213-60337232 None:intergenic 45.0%
! CAAACCTCAGCACAAGCTTT+TGG + chr3_2:60337273-60337292 None:intergenic 45.0%
! ACTCTGAAGGTCTTCCTTTG+CGG - chr3_2:60337475-60337494 Msa0414670:intron 45.0%
CAACAGCAGGATGTACGTAT+TGG - chr3_2:60337554-60337573 Msa0414670:intron 45.0%
AGCAGGATGTACGTATTGGA+GGG - chr3_2:60337558-60337577 Msa0414670:intron 45.0%
ATCCATGGCCTGTATACAAG+GGG + chr3_2:60337589-60337608 None:intergenic 45.0%
ATCACCAGCACGTAAATCCA+TGG + chr3_2:60337604-60337623 None:intergenic 45.0%
! GATTTACGTGCTGGTGATAC+TGG - chr3_2:60337606-60337625 Msa0414670:intron 45.0%
TTTAGTCGGATAGATCCTGG+GGG - chr3_2:60337876-60337895 Msa0414670:intron 45.0%
!! TCCTGGGGGAAAACTTGTTA+TGG - chr3_2:60337890-60337909 Msa0414670:intron 45.0%
!! CCTGGGGGAAAACTTGTTAT+GGG - chr3_2:60337891-60337910 Msa0414670:intron 45.0%
AATTCCGTAGACACACAGGT+TGG - chr3_2:60337930-60337949 Msa0414670:intron 45.0%
GTAACCAACCTGTGTGTCTA+CGG + chr3_2:60337937-60337956 None:intergenic 45.0%
TTCTAATGGCGGTTCTGCAA+AGG - chr3_2:60338079-60338098 Msa0414670:intron 45.0%
TCTAATGGCGGTTCTGCAAA+GGG - chr3_2:60338080-60338099 Msa0414670:intron 45.0%
! GCAAAGGGAGATACCTTTTC+TGG - chr3_2:60338095-60338114 Msa0414670:intron 45.0%
! AAGGGAGATACCTTTTCTGG+TGG - chr3_2:60338098-60338117 Msa0414670:intron 45.0%
TCGGCACAATTACTTCCCAA+TGG + chr3_2:60338137-60338156 None:intergenic 45.0%
GATCTTCTCCGTTCACCAAA+TGG - chr3_2:60338155-60338174 Msa0414670:intron 45.0%
CTCCGTTCACCAAATGGTAA+CGG - chr3_2:60338161-60338180 Msa0414670:intron 45.0%
TCCGTTCACCAAATGGTAAC+GGG - chr3_2:60338162-60338181 Msa0414670:intron 45.0%
AACGGGGAACTTCGCTTAAA+TGG - chr3_2:60338179-60338198 Msa0414670:intron 45.0%
ACATCCCGAACCTTCACATT+TGG - chr3_2:60338202-60338221 Msa0414670:intron 45.0%
GGTCCAGTAACCAAATGTGA+AGG + chr3_2:60338215-60338234 None:intergenic 45.0%
!! TTCGGCTTTAAGCAAACCAG+CGG + chr3_2:60338237-60338256 None:intergenic 45.0%
! ACAATGCTTGGCTTGACACT+GGG + chr3_2:60338428-60338447 None:intergenic 45.0%
TCCTCGATTGTGACAATGCT+TGG + chr3_2:60338440-60338459 None:intergenic 45.0%
AACTATTTCGTCCAGGGTGA+AGG - chr3_2:60339372-60339391 Msa0414670:intron 45.0%
GGACATGTTCGGAAAATGTC+TGG - chr3_2:60339467-60339486 Msa0414670:intron 45.0%
CACACAATACAAGAACAGCC+GGG + chr3_2:60340042-60340061 None:intergenic 45.0%
GCACACAATACAAGAACAGC+CGG + chr3_2:60340043-60340062 None:intergenic 45.0%
CACACGTTGCAAGTACATGT+TGG + chr3_2:60340099-60340118 None:intergenic 45.0%
GTTGACGAGTCAGATACCAA+TGG - chr3_2:60340225-60340244 Msa0414670:intron 45.0%
TTCTCTTGATGCTCCACCAT+TGG + chr3_2:60340244-60340263 None:intergenic 45.0%
! GCGAATCCTTTGGAAAACGA+AGG - chr3_2:60340267-60340286 Msa0414670:CDS 45.0%
! AGTCCTCCTTCGTTTTCCAA+AGG + chr3_2:60340276-60340295 None:intergenic 45.0%
AATAGAGGTCAAGTCGAGGT+TGG - chr3_2:60340297-60340316 Msa0414670:CDS 45.0%
AAGATCTATCTTTCCAGCGC+TGG + chr3_2:60340328-60340347 None:intergenic 45.0%
TGAGGATACGAGACACTTGT+CGG - chr3_2:60340509-60340528 Msa0414670:intron 45.0%
!!! TTTTTATTATATATATCAAT+AGG + chr3_2:60335646-60335665 None:intergenic 5.0%
AAAGGGTGGGGTTTACGATC+TGG - chr3_2:60333222-60333241 Msa0414670:CDS 50.0%
TGAACTCAGGTTCTCGCGAA+CGG + chr3_2:60334321-60334340 None:intergenic 50.0%
!! GCCAACCAGTTTGTTGACGA+TGG + chr3_2:60334675-60334694 None:intergenic 50.0%
TGCATACGATATTGGCCACC+AGG - chr3_2:60335079-60335098 Msa0414670:CDS 50.0%
TGTACCCGACCCCACTTATT+AGG - chr3_2:60335199-60335218 Msa0414670:CDS 50.0%
! AGCTCAACTGGGTTGAGCTA+AGG - chr3_2:60335530-60335549 Msa0414670:intron 50.0%
! GCTCAACTGGGTTGAGCTAA+GGG - chr3_2:60335531-60335550 Msa0414670:intron 50.0%
GTTAAAGGAGTTGGAGGTCC+TGG - chr3_2:60335553-60335572 Msa0414670:intron 50.0%
GTTATGTTCGGGCTTGAACC+AGG + chr3_2:60335574-60335593 None:intergenic 50.0%
GTCGATGAAACGGGCCATTT+AGG + chr3_2:60336053-60336072 None:intergenic 50.0%
CAGTCCGCTGTCAAAATGAG+CGG + chr3_2:60336102-60336121 None:intergenic 50.0%
TTAGGCCGTCATTCAGGGAA+GGG - chr3_2:60336252-60336271 Msa0414670:CDS 50.0%
GTATCCCCTTCCCTGAATGA+CGG + chr3_2:60336260-60336279 None:intergenic 50.0%
TCATTCAGGGAAGGGGATAC+TGG - chr3_2:60336260-60336279 Msa0414670:CDS 50.0%
ATGTGTTTGGGAAACCCGTC+AGG - chr3_2:60336401-60336420 Msa0414670:intron 50.0%
TGTGTTTGGGAAACCCGTCA+GGG - chr3_2:60336402-60336421 Msa0414670:intron 50.0%
GGAAAGAGTTGTTCCCTGAC+GGG + chr3_2:60336418-60336437 None:intergenic 50.0%
GGGAAAGAGTTGTTCCCTGA+CGG + chr3_2:60336419-60336438 None:intergenic 50.0%
AACTCTTTCCCACCATCTGG+TGG - chr3_2:60336428-60336447 Msa0414670:intron 50.0%
TAGTCTCTCCACCAGATGGT+GGG + chr3_2:60336439-60336458 None:intergenic 50.0%
TCTGTAGTCTCTCCACCAGA+TGG + chr3_2:60336443-60336462 None:intergenic 50.0%
TCTGGTGGAGAGACTACAGA+CGG - chr3_2:60336443-60336462 Msa0414670:intron 50.0%
GACTACAGACGGAAGACTTG+AGG - chr3_2:60336454-60336473 Msa0414670:intron 50.0%
GATCTCGGCCCTTGATGAAA+GGG + chr3_2:60336494-60336513 None:intergenic 50.0%
AGATCTCGGCCCTTGATGAA+AGG + chr3_2:60336495-60336514 None:intergenic 50.0%
GCAGGGATCAAGTTACTCCA+AGG + chr3_2:60337085-60337104 None:intergenic 50.0%
TCTCCCAAAAGCTTGTGCTG+AGG - chr3_2:60337266-60337285 Msa0414670:CDS 50.0%
! CTCTGAAGGTCTTCCTTTGC+GGG - chr3_2:60337476-60337495 Msa0414670:intron 50.0%
TTCACATCTTGGACCCGCAA+AGG + chr3_2:60337492-60337511 None:intergenic 50.0%
TTTGCGGGTCCAAGATGTGA+AGG - chr3_2:60337491-60337510 Msa0414670:intron 50.0%
TTGCGGGTCCAAGATGTGAA+GGG - chr3_2:60337492-60337511 Msa0414670:intron 50.0%
CAGCAGGATGTACGTATTGG+AGG - chr3_2:60337557-60337576 Msa0414670:intron 50.0%
! CCCATAACAAGTTTTCCCCC+AGG + chr3_2:60337894-60337913 None:intergenic 50.0%
! CCCCGTTACCATTTGGTGAA+CGG + chr3_2:60338166-60338185 None:intergenic 50.0%
! CCGTTCACCAAATGGTAACG+GGG - chr3_2:60338163-60338182 Msa0414670:intron 50.0%
CGAAGTTCCCCGTTACCATT+TGG + chr3_2:60338173-60338192 None:intergenic 50.0%
!! TCGGCTTTAAGCAAACCAGC+GGG + chr3_2:60338236-60338255 None:intergenic 50.0%
! GACAATGCTTGGCTTGACAC+TGG + chr3_2:60338429-60338448 None:intergenic 50.0%
! GCCAAGCATTGTCACAATCG+AGG - chr3_2:60338436-60338455 Msa0414670:intron 50.0%
ATCTTCAGCGCCTCTTCATC+TGG - chr3_2:60338665-60338684 Msa0414670:CDS 50.0%
TCTTCAGCGCCTCTTCATCT+GGG - chr3_2:60338666-60338685 Msa0414670:CDS 50.0%
GGACTCTTACCCAGATGAAG+AGG + chr3_2:60338678-60338697 None:intergenic 50.0%
!! GGAGGAAGAAGAGCATCAAC+CGG + chr3_2:60339442-60339461 None:intergenic 50.0%
ATGCTCTTCTTCCTCCCAAG+TGG - chr3_2:60339446-60339465 Msa0414670:intron 50.0%
TCCTCCCAAGTGGACATGTT+CGG - chr3_2:60339456-60339475 Msa0414670:intron 50.0%
CAGATCTTCATGTTCCGCAC+CGG - chr3_2:60339606-60339625 Msa0414670:intron 50.0%
ATCCAAGAACACGAGCCTTC+TGG - chr3_2:60339919-60339938 Msa0414670:intron 50.0%
!! CTCGCCAGTTTAGCCGTTTT+AGG - chr3_2:60339952-60339971 Msa0414670:intron 50.0%
! GTGTCTAGGATGTTTCGTGG+TGG + chr3_2:60340016-60340035 None:intergenic 50.0%
! ACGGTGTCTAGGATGTTTCG+TGG + chr3_2:60340019-60340038 None:intergenic 50.0%
AAACATCCTAGACACCGTCC+CGG - chr3_2:60340021-60340040 Msa0414670:intron 50.0%
CAATACAAGAACAGCCGGGA+CGG + chr3_2:60340038-60340057 None:intergenic 50.0%
ATTCAGCCACCAAGCGGAAA+AGG - chr3_2:60340063-60340082 Msa0414670:intron 50.0%
TTCAGCCACCAAGCGGAAAA+GGG - chr3_2:60340064-60340083 Msa0414670:intron 50.0%
! TTGTGTCTCCCTTTTCCGCT+TGG + chr3_2:60340075-60340094 None:intergenic 50.0%
!! CGTTTTGAACCGACGCTTCA+CGG + chr3_2:60340127-60340146 None:intergenic 50.0%
GACGAGTCAGATACCAATGG+TGG - chr3_2:60340228-60340247 Msa0414670:intron 50.0%
ACTTGCGAGTCATCGCGATT+TGG + chr3_2:60340360-60340379 None:intergenic 50.0%
AAATCGCGATGACTCGCAAG+TGG - chr3_2:60340359-60340378 Msa0414670:intron 50.0%
GGCCACTCAATCTAATGGTG+AGG - chr3_2:60340491-60340510 Msa0414670:intron 50.0%
GAACTCAGGTTCTCGCGAAC+GGG + chr3_2:60334320-60334339 None:intergenic 55.0%
GGCACCCTTCCTCTACGAAT+CGG - chr3_2:60334385-60334404 Msa0414670:intron 55.0%
ACCCTTCCTCTACGAATCGG+AGG - chr3_2:60334388-60334407 Msa0414670:intron 55.0%
! CCCTCCGATTCGTAGAGGAA+GGG + chr3_2:60334392-60334411 None:intergenic 55.0%
CCCTTCCTCTACGAATCGGA+GGG - chr3_2:60334389-60334408 Msa0414670:intron 55.0%
! ACCCTCCGATTCGTAGAGGA+AGG + chr3_2:60334393-60334412 None:intergenic 55.0%
! GCTAACCCTCCGATTCGTAG+AGG + chr3_2:60334397-60334416 None:intergenic 55.0%
GTTCTGCAGCCTATCCACAG+TGG - chr3_2:60334801-60334820 Msa0414670:intron 55.0%
AGAGGGGGGATAGCTCAACT+GGG - chr3_2:60335519-60335538 Msa0414670:intron 55.0%
GTTAGGCCGTCATTCAGGGA+AGG - chr3_2:60336251-60336270 Msa0414670:CDS 55.0%
TAGGCCGTCATTCAGGGAAG+GGG - chr3_2:60336253-60336272 Msa0414670:CDS 55.0%
GTAGTCTCTCCACCAGATGG+TGG + chr3_2:60336440-60336459 None:intergenic 55.0%
TTCTTACCCCTCCCATCACC+AGG + chr3_2:60336611-60336630 None:intergenic 55.0%
TTGGCCTAGGATTACGGACC+AGG - chr3_2:60336649-60336668 Msa0414670:intron 55.0%
AGCTCCTGGTCCGTAATCCT+AGG + chr3_2:60336656-60336675 None:intergenic 55.0%
TAGGATTACGGACCAGGAGC+TGG - chr3_2:60336655-60336674 Msa0414670:intron 55.0%
TGAGTGCCAGTGATGCAGGT+CGG - chr3_2:60337229-60337248 Msa0414670:CDS 55.0%
ACCAATCCGACCTGCATCAC+TGG + chr3_2:60337238-60337257 None:intergenic 55.0%
GGGTGTGACCCCTTGTATAC+AGG - chr3_2:60337578-60337597 Msa0414670:intron 55.0%
GACCCCTTGTATACAGGCCA+TGG - chr3_2:60337584-60337603 Msa0414670:intron 55.0%
CAGGCCATGGATTTACGTGC+TGG - chr3_2:60337597-60337616 Msa0414670:intron 55.0%
CATTTGGTTACTGGACCCGC+TGG - chr3_2:60338218-60338237 Msa0414670:intron 55.0%
! ATGCTTGGCTTGACACTGGG+CGG + chr3_2:60338425-60338444 None:intergenic 55.0%
GTCCAGGGTGAAGGAACAGT+GGG - chr3_2:60339381-60339400 Msa0414670:intron 55.0%
TCCGAACATGTCCACTTGGG+AGG + chr3_2:60339460-60339479 None:intergenic 55.0%
CGAGCTGAGCTCAAGGGAAT+TGG - chr3_2:60339630-60339649 Msa0414670:intron 55.0%
AGCCAGAAGGCTCGTGTTCT+TGG + chr3_2:60339924-60339943 None:intergenic 55.0%
GTGTGCATTCAGCCACCAAG+CGG - chr3_2:60340057-60340076 Msa0414670:intron 55.0%
! TGTCTCCCTTTTCCGCTTGG+TGG + chr3_2:60340072-60340091 None:intergenic 55.0%
TGTGTACGACCGTGAAGCGT+CGG - chr3_2:60340115-60340134 Msa0414670:intron 55.0%
! CGGTTCTTGGACCGCCATTT+TGG + chr3_2:60340434-60340453 None:intergenic 55.0%
GGGTGGGGTTTACGATCTGG+TGG - chr3_2:60333225-60333244 Msa0414670:CDS 60.0%
! CTCGCGAACGGGTCGACTTT+AGG + chr3_2:60334309-60334328 None:intergenic 60.0%
GAGAGGGGGGATAGCTCAAC+TGG - chr3_2:60335518-60335537 Msa0414670:intron 60.0%
CTCGGCCCTTGATGAAAGGG+AGG + chr3_2:60336491-60336510 None:intergenic 60.0%
ATTGCTCGGCCTCCTGGTGA+TGG - chr3_2:60336596-60336615 Msa0414670:intron 60.0%
TTGCTCGGCCTCCTGGTGAT+GGG - chr3_2:60336597-60336616 Msa0414670:intron 60.0%
TTACCCCTCCCATCACCAGG+AGG + chr3_2:60336608-60336627 None:intergenic 60.0%
CAGACAAACGCTCCAGCTCC+TGG + chr3_2:60336670-60336689 None:intergenic 60.0%
! CAGGAGCTGGAGCGTTTGTC+TGG - chr3_2:60336668-60336687 Msa0414670:intron 60.0%
GTGCTGAGTGCCAGTGATGC+AGG - chr3_2:60337225-60337244 Msa0414670:CDS 60.0%
GCCAGTGATGCAGGTCGGAT+TGG - chr3_2:60337234-60337253 Msa0414670:CDS 60.0%
CGTCCAGGGTGAAGGAACAG+TGG - chr3_2:60339380-60339399 Msa0414670:intron 60.0%
AGCCCACTGTTCCTTCACCC+TGG + chr3_2:60339386-60339405 None:intergenic 60.0%
ACCGGACGAGCTGAGCTCAA+GGG - chr3_2:60339624-60339643 Msa0414670:intron 60.0%
TCCCTTGAGCTCAGCTCGTC+CGG + chr3_2:60339628-60339647 None:intergenic 60.0%
!! GCGAGAGCGTCTAAGCCAGA+AGG + chr3_2:60339937-60339956 None:intergenic 60.0%
CTCCAGCTGCGGAATCAGCA+GGG + chr3_2:60339993-60340012 None:intergenic 60.0%
TTTCGTGGTGGCTCCAGCTG+CGG + chr3_2:60340004-60340023 None:intergenic 60.0%
CCAGGAGGCCGAGCAATACG+TGG + chr3_2:60336593-60336612 None:intergenic 65.0%
CCACGTATTGCTCGGCCTCC+TGG - chr3_2:60336590-60336609 Msa0414670:intron 65.0%
!! TCGGCCTCCTGGTGATGGGA+GGG - chr3_2:60336601-60336620 Msa0414670:intron 65.0%
! CTTGGCTTGACACTGGGCGG+TGG + chr3_2:60338422-60338441 None:intergenic 65.0%
TGAGCTCAGCTCGTCCGGTG+CGG + chr3_2:60339623-60339642 None:intergenic 65.0%
CACCGGACGAGCTGAGCTCA+AGG - chr3_2:60339623-60339642 Msa0414670:intron 65.0%
GCTCCAGCTGCGGAATCAGC+AGG + chr3_2:60339994-60340013 None:intergenic 65.0%
GAACAGCCGGGACGGTGTCT+AGG + chr3_2:60340030-60340049 None:intergenic 65.0%
!! CTCGGCCTCCTGGTGATGGG+AGG - chr3_2:60336600-60336619 Msa0414670:intron 70.0%
!! CGGCCTCCTGGTGATGGGAG+GGG - chr3_2:60336602-60336621 Msa0414670:intron 70.0%
!! GGCCCTGCTGATTCCGCAGC+TGG - chr3_2:60339988-60340007 Msa0414670:intron 70.0%
GAGGTTGGCGAGTCCAGCGC+TGG - chr3_2:60340312-60340331 Msa0414670:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 60332641 60340882 60332641 ID=Msa0414670;Name=Msa0414670
chr3_2 mRNA 60332641 60340882 60332641 ID=Msa0414670-mRNA-1;Parent=Msa0414670;Name=Msa0414670-mRNA-1;_AED=0.10;_eAED=0.10;_QI=184|0.91|1|1|0.91|0.84|13|259|898
chr3_2 exon 60332641 60333642 60332641 ID=Msa0414670-mRNA-1:exon:12576;Parent=Msa0414670-mRNA-1
chr3_2 exon 60333847 60333914 60333847 ID=Msa0414670-mRNA-1:exon:12575;Parent=Msa0414670-mRNA-1
chr3_2 exon 60334023 60334136 60334023 ID=Msa0414670-mRNA-1:exon:12574;Parent=Msa0414670-mRNA-1
chr3_2 exon 60334836 60334885 60334836 ID=Msa0414670-mRNA-1:exon:12573;Parent=Msa0414670-mRNA-1
chr3_2 exon 60335042 60335464 60335042 ID=Msa0414670-mRNA-1:exon:12572;Parent=Msa0414670-mRNA-1
chr3_2 exon 60335576 60335652 60335576 ID=Msa0414670-mRNA-1:exon:12571;Parent=Msa0414670-mRNA-1
chr3_2 exon 60335896 60336070 60335896 ID=Msa0414670-mRNA-1:exon:12570;Parent=Msa0414670-mRNA-1
chr3_2 exon 60336236 60336332 60336236 ID=Msa0414670-mRNA-1:exon:12569;Parent=Msa0414670-mRNA-1
chr3_2 exon 60336830 60337491 60336830 ID=Msa0414670-mRNA-1:exon:12568;Parent=Msa0414670-mRNA-1
chr3_2 exon 60338612 60338713 60338612 ID=Msa0414670-mRNA-1:exon:12567;Parent=Msa0414670-mRNA-1
chr3_2 exon 60338806 60338887 60338806 ID=Msa0414670-mRNA-1:exon:12566;Parent=Msa0414670-mRNA-1
chr3_2 exon 60340249 60340374 60340249 ID=Msa0414670-mRNA-1:exon:12565;Parent=Msa0414670-mRNA-1
chr3_2 exon 60340721 60340882 60340721 ID=Msa0414670-mRNA-1:exon:12564;Parent=Msa0414670-mRNA-1
chr3_2 five_prime_UTR 60340721 60340882 60340721 ID=Msa0414670-mRNA-1:five_prime_utr;Parent=Msa0414670-mRNA-1
chr3_2 five_prime_UTR 60340353 60340374 60340353 ID=Msa0414670-mRNA-1:five_prime_utr;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60340249 60340352 60340249 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60338806 60338887 60338806 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60338612 60338713 60338612 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60336830 60337491 60336830 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60336236 60336332 60336236 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60335896 60336070 60335896 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60335576 60335652 60335576 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60335042 60335464 60335042 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60334836 60334885 60334836 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60334023 60334136 60334023 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60333847 60333914 60333847 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 CDS 60332900 60333642 60332900 ID=Msa0414670-mRNA-1:cds;Parent=Msa0414670-mRNA-1
chr3_2 three_prime_UTR 60332641 60332899 60332641 ID=Msa0414670-mRNA-1:three_prime_utr;Parent=Msa0414670-mRNA-1
Gene Sequence

>Msa0414670

ATGGGTTCTGACATTGGTATGGTAAATGGTTCGTGTGTTCATGAATGGAAGAAAGGGTGGGGTTTACGATCTGGTGGATTTGCTCAACTTTGCTTCAAGTGCGGATCTCCCTTTGAGAGTTCAGTTTTTTGTAATAAATTCCATCGTCAACAAACTGGTTGGCGAGAGTGTAACATTTGCAACAAGCCTATCCACAGTGGATGTGTAGTATCTAAATCTCTGTTCGAGTATCTTGACTTCGGCGGTATAGGTTGTGTTAGCTGTGTAAATACTTCCCAACTAAATATGATTCGTAATACTGAAAATCCTAAATGGCCCGTTTCATCGACCCAAAATAATGCAAGGGATATTCATTCCGCTCATTTTGACAGCGGACTGTTTATGAGTAATGTTGATGAAGGAAAGCTTATGCAATTATGCAGAGTTGTTGAAGCTAGTGAATCTATCCATATGAGTCATGCTCCGATAAACAACATGATTACATCTAATGGGAAAAACAATCAAGAAGTTAGGCCGTCATTCAGGGAAGGGGATACTGGATTTTCAAATGTGATTAAACCGCCTGTTCAGTCATTAACTTTTGCCACGTTAGAAAATAATAGACCAGCATGGGAGATTAAAAGCATGCATGAATCAAATGCGAGGCCGTCTTTGAATATGTGTTTGGGAAACCCGTCAGGGAACAACTCTTTCCCACCATCTGGTGGAGAGACTACAGACGGAAGACTTGAGGGAAAAGTATCTCCTCCCTTTCATCAAGGGCCGAGATCTCGTCCTATACTTCCCAAACTGTTAAAGACCGGCCTTACCATGAATATAGAAACTGAAAAAGGGACACTTTCTCAACCACGTATTGCTCGGCCTCCTGGTGATGGGAGGGGTAAGAATCAGTTACTTCCTAGATATTGGCCTAGGATTACGGACCAGGAGCTGGAGCGTTTGTCTGGAGATTTGAAGTCCACAGTAGTGCCATTGTTTGAGAAGGTGCTGAGTGCCAGTGATGCAGGTCGGATTGGTCGTCTTGTTCTCCCAAAAGCTTGTGCTGAGGCATATTTTCCTCATATTACACACTCTGAAGGTCTTCCTTTGCGGGTCCAAGATGTGAAGGGTAATGAATGGACTTTTCAATTCAGATTTTGGCCTAATAACAACAGCAGGATGTACGTATTGGAGGGTGTGACCCCTTGTATACAGGCCATGGATTTACGTGCTGGTGATACTGTTACATTTAGTCGGATAGATCCTGGGGGAAAACTTGTTATGGGTTTCAGAAAGTCATCAAATTCCGTAGACACACAGGATGCTTCTACATCTGCACATTCTAATGGCGGTTCTGCAAAGGGAGATACCTTTTCTGGTGGAAATGAGAATCTTCCATTGGGAAGTAATTGTGCCGATCTTCTCCGTTCACCAAATGGTAACGGGGAACTTCGCTTAAATGGACATCCCGAACCTTCACATTTGGTTACTGGACCCGCTGGTTTGCTTAAAGCCGAAAATGGCGAAATGACATGCAATAATTCACTGGACCAAAAAAATTCAGCTTCAGAGAAGAAGAGGACTCGAAATATTGGCCTTAAAAGTAAGAGATTGCTTATTGGTAATGATGATTCTATGGAGTTGAGACTTACATGGGAAGAAGCACAAGACTTGCTTCGTCCACCGCCCAGTGTCAAGCCAAGCATTGTCACAATCGAGGATCAAGTATTTGAAGAATATGATGAACCCCCAGTTTTTGGAAAGAGAACAATCTTCAGCGCCTCTTCATCTGGGGTGAAGGAACAGTGGGCTCAATGTGATGATTGCTCTAAATGGAGAAAGTTACCGGTTGATGCTCTTCTTCCTCCCAAGTGGACATGTTCGGAAAATGTCTGGGATACAAGCAGATCTTCATGTTCCGCACCGGACGAGCTGAGCTCAAGGGAATTGGAAAATCTTTTGAAATCTAGCAAAGATTTTAAGAAGCGACGGATTGTAGAAAACAGCAAGTTGATCCAAGAACACGAGCCTTCTGGCTTAGACGCTCTCGCCAGTTTAGCCGTTTTAGGAGAAAATCTCTTGGGCCCTGCTGATTCCGCAGCTGGAGCCACCACGAAACATCCTAGACACCGTCCCGGCTGTTCTTGTATTGTGTGCATTCAGCCACCAAGCGGAAAAGGGAGACACAAGCCAACATGTACTTGCAACGTGTGTACGACCGTGAAGCGTCGGTTCAAAACGCTTATGCTACGCAAGAAGAAACGACAATCAGAGCGTGAAGCAGATGCCGCCGCCAAAAAAGAACACATTCACAACAGAGTTGACGAGTCAGATACCAATGGTGGAGCATCAAGAGAAGTTGCGAATCCTTTGGAAAACGAAGGAGGACTAAATAGAGGTCAAGTCGAGGTTGGCGAGTCCAGCGCTGGAAAGATAGATCTTAATTGTCATCCAAATCGCGATGACTCGCAAGTGGATAATGTCGCAAAACTTAGTGATCATATATGGGAACATATTAATATGAACCAAAATGGCGGTCCAAGAACCGTTAATACTGAAATGGAGGAAGGTCAACATTCTTCTTTGGCCACTCAATCTAATGGTGAGGATACGAGACACTTGTCGGATGAAAGATGCATTGCATCCAATGTTGGGAACAAAGAAAGAAGAGATGAGGTATTAAATCATTCAAATGAAAGTGAAAAGAATTTGTCTTGA
Protein sequence

>Msa0414670

MGSDIGMVNGSCVHEWKKGWGLRSGGFAQLCFKCGSPFESSVFCNKFHRQQTGWRECNICNKPIHSGCVVSKSLFEYLDFGGIGCVSCVNTSQLNMIRNTENPKWPVSSTQNNARDIHSAHFDSGLFMSNVDEGKLMQLCRVVEASESIHMSHAPINNMITSNGKNNQEVRPSFREGDTGFSNVIKPPVQSLTFATLENNRPAWEIKSMHESNARPSLNMCLGNPSGNNSFPPSGGETTDGRLEGKVSPPFHQGPRSRPILPKLLKTGLTMNIETEKGTLSQPRIARPPGDGRGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPHITHSEGLPLRVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQAMDLRAGDTVTFSRIDPGGKLVMGFRKSSNSVDTQDASTSAHSNGGSAKGDTFSGGNENLPLGSNCADLLRSPNGNGELRLNGHPEPSHLVTGPAGLLKAENGEMTCNNSLDQKNSASEKKRTRNIGLKSKRLLIGNDDSMELRLTWEEAQDLLRPPPSVKPSIVTIEDQVFEEYDEPPVFGKRTIFSASSSGVKEQWAQCDDCSKWRKLPVDALLPPKWTCSENVWDTSRSSCSAPDELSSRELENLLKSSKDFKKRRIVENSKLIQEHEPSGLDALASLAVLGENLLGPADSAAGATTKHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCTTVKRRFKTLMLRKKKRQSEREADAAAKKEHIHNRVDESDTNGGASREVANPLENEGGLNRGQVEVGESSAGKIDLNCHPNRDDSQVDNVAKLSDHIWEHINMNQNGGPRTVNTEMEEGQHSSLATQSNGEDTRHLSDERCIASNVGNKERRDEVLNHSNESEKNLS*