Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0417530 | XP_003601098.1 | 98.171 | 328 | 6 | 0 | 98 | 425 | 34 | 361 | 0.0 | 672 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0417530 | sp|Q9SL92|HCS1_ARATH | 71.037 | 328 | 93 | 2 | 98 | 424 | 41 | 367 | 2.42e-171 | 487 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0417530 | G7J3L5 | 98.171 | 328 | 6 | 0 | 98 | 425 | 34 | 361 | 0.0 | 672 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0417530 | Msa1237820 | 0.815461 | 9.137358e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0417530 | MtrunA17_Chr3g0115071 | 98.171 | 328 | 6 | 0 | 98 | 425 | 34 | 361 | 0.0 | 672 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0417530 | AT2G25710.5 | 71.037 | 328 | 93 | 2 | 98 | 424 | 3 | 329 | 2.17e-172 | 486 |
Msa0417530 | AT2G25710.4 | 71.037 | 328 | 93 | 2 | 98 | 424 | 3 | 329 | 2.17e-172 | 486 |
Msa0417530 | AT2G25710.1 | 71.037 | 328 | 93 | 2 | 98 | 424 | 41 | 367 | 2.46e-172 | 487 |
Msa0417530 | AT2G25710.2 | 71.037 | 328 | 93 | 2 | 98 | 424 | 41 | 367 | 2.46e-172 | 487 |
Msa0417530 | AT1G37150.2 | 70.679 | 324 | 93 | 2 | 102 | 424 | 7 | 329 | 1.10e-169 | 479 |
Msa0417530 | AT1G37150.4 | 68.662 | 284 | 78 | 1 | 152 | 424 | 3 | 286 | 7.50e-145 | 414 |
Msa0417530 | AT1G37150.9 | 66.894 | 293 | 95 | 2 | 102 | 393 | 7 | 298 | 9.24e-143 | 411 |
Msa0417530 | AT1G37150.3 | 67.708 | 288 | 91 | 2 | 102 | 388 | 7 | 293 | 5.90e-142 | 407 |
Msa0417530 | AT1G37150.8 | 67.708 | 288 | 91 | 2 | 102 | 388 | 7 | 293 | 5.90e-142 | 407 |
Msa0417530 | AT1G37150.7 | 67.708 | 288 | 91 | 2 | 102 | 388 | 7 | 293 | 5.90e-142 | 407 |
Msa0417530 | AT1G37150.5 | 67.832 | 286 | 90 | 2 | 102 | 386 | 7 | 291 | 1.02e-141 | 406 |
Msa0417530 | AT1G37150.6 | 67.832 | 286 | 90 | 2 | 102 | 386 | 7 | 291 | 1.02e-141 | 406 |
Msa0417530 | AT2G25710.3 | 67.910 | 268 | 82 | 3 | 98 | 363 | 41 | 306 | 2.02e-132 | 383 |
Msa0417530 | AT2G25710.8 | 67.910 | 268 | 82 | 3 | 98 | 363 | 41 | 306 | 2.02e-132 | 383 |
Msa0417530 | AT2G25710.7 | 67.589 | 253 | 80 | 2 | 98 | 349 | 41 | 292 | 1.25e-121 | 355 |
Msa0417530 | AT2G25710.6 | 67.589 | 253 | 80 | 2 | 98 | 349 | 41 | 292 | 1.25e-121 | 355 |
Msa0417530 | AT1G37150.1 | 71.287 | 202 | 58 | 0 | 187 | 388 | 9 | 210 | 3.97e-108 | 318 |
Find 94 sgRNAs with CRISPR-Local
Find 551 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTTAGAACTGTATTTA+AGG | 0.111945 | 3_2:-64747074 | None:intergenic |
GAACATCTTCTCTTTGAAAT+TGG | 0.211376 | 3_2:-64747114 | None:intergenic |
TCTCTTTCTACCAATCAATT+TGG | 0.239071 | 3_2:+64745618 | Msa0417530:CDS |
AATTCATGAATGAACTAAAT+TGG | 0.279539 | 3_2:-64745596 | None:intergenic |
AGGGAGCTTGAGAGTGTTAT+TGG | 0.294498 | 3_2:-64745505 | None:intergenic |
TCAAACCTCTTCCCTTGTTC+TGG | 0.304902 | 3_2:-64745939 | None:intergenic |
CGAACATGCGGTAACAATTC+AGG | 0.306394 | 3_2:+64750012 | Msa0417530:CDS |
CCGTTTAAGTACAGATCATT+TGG | 0.323737 | 3_2:-64746775 | None:intergenic |
GGTTAAGCAGAATATGAGTT+TGG | 0.325261 | 3_2:-64742679 | Msa0417520:five_prime_UTR |
AGTTCAGTATGTTGTTTCCT+TGG | 0.354644 | 3_2:+64746138 | Msa0417530:CDS |
GAACTCTGAATGTAAAATAA+TGG | 0.359620 | 3_2:-64745544 | None:intergenic |
ATACTGAAAATTTATATGTT+GGG | 0.361187 | 3_2:-64742716 | Msa0417520:five_prime_UTR |
ATGGATAGTTCTTTCTTGTC+AGG | 0.365223 | 3_2:-64745525 | None:intergenic |
CAGGGTGGAGCTCACACATT+TGG | 0.389032 | 3_2:-64750371 | None:intergenic |
AATACTGAAAATTTATATGT+TGG | 0.391610 | 3_2:-64742717 | Msa0417520:five_prime_UTR |
ACTGTATTTAAGGATGTTGT+TGG | 0.393939 | 3_2:-64747064 | None:intergenic |
ATTTCAAAGAGAAGATGTTC+TGG | 0.407060 | 3_2:+64747117 | Msa0417530:CDS |
TTCCATTACCTATTACCATC+AGG | 0.410856 | 3_2:-64750390 | None:intergenic |
CCAAATGATCTGTACTTAAA+CGG | 0.410986 | 3_2:+64746775 | Msa0417530:CDS |
AGTTGTGGATTGCAGTTTGT+TGG | 0.414787 | 3_2:+64745431 | Msa0417530:CDS |
AGCTCCACCCTGATGGTAAT+AGG | 0.416462 | 3_2:+64750382 | Msa0417530:CDS |
AATTTGGCAGGCTTCTCATA+TGG | 0.421581 | 3_2:+64745634 | Msa0417530:CDS |
TACTTAAACGGATTTAAAGT+TGG | 0.432774 | 3_2:+64746787 | Msa0417530:CDS |
TTGTAGGGTTTGACGTCCTC+GGG | 0.435328 | 3_2:+64750321 | Msa0417530:intron |
TTTGTAGGGTTTGACGTCCT+CGG | 0.435494 | 3_2:+64750320 | Msa0417530:intron |
GACGTCCTCGGGATATTTGT+TGG | 0.437033 | 3_2:+64750332 | Msa0417530:CDS |
GTTAAGCAGAATATGAGTTT+GGG | 0.438922 | 3_2:-64742678 | Msa0417520:five_prime_UTR |
GAAAACATCAGGCAACCTAA+TGG | 0.441676 | 3_2:-64746076 | None:intergenic |
GTTCTTCAATTCACAACGTC+AGG | 0.457095 | 3_2:+64742772 | Msa0417530:CDS |
GGCTATCACAGAGGCAATCA+AGG | 0.464240 | 3_2:+64746159 | Msa0417530:CDS |
TCTTGTAATATAGTTCCTCT+AGG | 0.468024 | 3_2:-64749628 | None:intergenic |
TACTGAAAATTTATATGTTG+GGG | 0.468405 | 3_2:-64742715 | Msa0417520:five_prime_UTR |
GCAGAGTAAAAGAAAACATC+AGG | 0.469791 | 3_2:-64746087 | None:intergenic |
GAGAAGCCTGCCAAATTGAT+TGG | 0.473011 | 3_2:-64745628 | None:intergenic |
AATACACACGGGAAGGTTGA+TGG | 0.473374 | 3_2:+64745107 | Msa0417530:CDS |
AATGCATGGGAGTCTCCATT+AGG | 0.474078 | 3_2:+64746061 | Msa0417530:CDS |
TTTCTACCAATCAATTTGGC+AGG | 0.476100 | 3_2:+64745622 | Msa0417530:CDS |
TTGAAGAAAATCGCAGAGAA+AGG | 0.485044 | 3_2:-64742741 | Msa0417520:five_prime_UTR |
GAAACAACATACTGAACTAA+AGG | 0.493234 | 3_2:-64746133 | None:intergenic |
CATGAATGAACTAAATTGGA+AGG | 0.495238 | 3_2:-64745592 | None:intergenic |
CTTGTAATATAGTTCCTCTA+GGG | 0.500499 | 3_2:-64749627 | None:intergenic |
CTTCTTTGATTTATATGTAG+AGG | 0.504393 | 3_2:-64746824 | None:intergenic |
GTTTAGTTAATCATTTGTAA+AGG | 0.505712 | 3_2:+64750968 | Msa0417530:three_prime_UTR |
TTTACTCTGCAAATGGAGGA+TGG | 0.511964 | 3_2:+64746100 | Msa0417530:CDS |
CTCATATTCTGCTTAACCTC+GGG | 0.513380 | 3_2:+64742684 | Msa0417530:CDS |
CTCTGCAAATGGAGGATGGA+CGG | 0.514061 | 3_2:+64746104 | Msa0417530:CDS |
TAACTAAACAATCATGAGCT+TGG | 0.522783 | 3_2:-64750954 | None:intergenic |
TGGATAGTTCTTTCTTGTCA+GGG | 0.530693 | 3_2:-64745524 | None:intergenic |
CCAACACATACTGTACCAAC+CGG | 0.533546 | 3_2:-64745910 | None:intergenic |
TGAAGAAAATCGCAGAGAAA+GGG | 0.536043 | 3_2:-64742740 | Msa0417520:five_prime_UTR |
TTAAACGGATTTAAAGTTGG+AGG | 0.536654 | 3_2:+64746790 | Msa0417530:CDS |
AAGAAGTTCAATATCAGTGC+AGG | 0.537210 | 3_2:+64746841 | Msa0417530:CDS |
TCCATTACCTATTACCATCA+GGG | 0.541073 | 3_2:-64750389 | None:intergenic |
TGCAGTTTGTTGGTTCTATG+TGG | 0.543232 | 3_2:+64745441 | Msa0417530:CDS |
TCTGCAAATGGAGGATGGAC+GGG | 0.547695 | 3_2:+64746105 | Msa0417530:CDS |
TCGGGATATTTGTTGGCAGT+CGG | 0.549135 | 3_2:+64750339 | Msa0417530:CDS |
CAGGTCGGTCAAAGAATGCA+TGG | 0.550156 | 3_2:+64746047 | Msa0417530:intron |
ATTACAAGACATGGTTGCAC+AGG | 0.556223 | 3_2:+64749642 | Msa0417530:CDS |
TATACACTCATGGCATCCTC+AGG | 0.556833 | 3_2:+64745207 | Msa0417530:CDS |
TAATCATTTGTAAAGGAGTG+TGG | 0.565262 | 3_2:+64750975 | Msa0417530:three_prime_UTR |
GTTGTAAACCCTCCTTGTGG+TGG | 0.586071 | 3_2:-64745169 | None:intergenic |
TCTTTCAACATATACACTCA+TGG | 0.588980 | 3_2:+64745197 | Msa0417530:CDS |
GTTCTAAGAGAATTGTCTGT+GGG | 0.590225 | 3_2:+64747085 | Msa0417530:CDS |
CGTTGTTATTAGCCACCACA+AGG | 0.591906 | 3_2:+64745157 | Msa0417530:CDS |
TGAGTGTATATGTTGAAAGA+TGG | 0.594866 | 3_2:-64745194 | None:intergenic |
GATATCCAGAACAAGGGAAG+AGG | 0.594894 | 3_2:+64745934 | Msa0417530:CDS |
TGTTGGTGATATCCAGAACA+AGG | 0.598168 | 3_2:+64745927 | Msa0417530:CDS |
GCATTGATGTTAAAATCAAG+TGG | 0.601093 | 3_2:+64746752 | Msa0417530:CDS |
GTTATTAGCCACCACAAGGA+GGG | 0.602791 | 3_2:+64745161 | Msa0417530:CDS |
ATATGTTGCCTGACCAGACA+AGG | 0.602815 | 3_2:-64750877 | None:intergenic |
ACTCATATTCTGCTTAACCT+CGG | 0.607813 | 3_2:+64742683 | Msa0417530:CDS |
TACACAGCTCATGTCACAAG+AGG | 0.612533 | 3_2:+64750703 | Msa0417530:three_prime_UTR |
CCGGTTGGTACAGTATGTGT+TGG | 0.612660 | 3_2:+64745910 | Msa0417530:CDS |
ACTGAAAATTTATATGTTGG+GGG | 0.624966 | 3_2:-64742714 | Msa0417520:five_prime_UTR |
AGGTCGGTCAAAGAATGCAT+GGG | 0.628269 | 3_2:+64746048 | Msa0417530:intron |
TCATGTGTCGAAGTTAACTC+AGG | 0.633045 | 3_2:-64745660 | None:intergenic |
ATGTGTGAGCTCCACCCTGA+TGG | 0.635556 | 3_2:+64750375 | Msa0417530:CDS |
GATTGCCTCTGTGATAGCCA+AGG | 0.635755 | 3_2:-64746155 | None:intergenic |
AGGAACTATATTACAAGACA+TGG | 0.642353 | 3_2:+64749633 | Msa0417530:CDS |
GTTAGACAATACACACGGGA+AGG | 0.656409 | 3_2:+64745100 | Msa0417530:CDS |
TCATTTGTAAAGGAGTGTGG+TGG | 0.661393 | 3_2:+64750978 | Msa0417530:three_prime_UTR |
TGTTATTAGCCACCACAAGG+AGG | 0.667643 | 3_2:+64745160 | Msa0417530:CDS |
AGTTCTAAGAGAATTGTCTG+TGG | 0.675294 | 3_2:+64747084 | Msa0417530:CDS |
TGCAGGATTTCAAACCCTAG+AGG | 0.679588 | 3_2:+64749613 | Msa0417530:intron |
CGTTGTGAATTGAAGAACAG+AGG | 0.679980 | 3_2:-64742767 | Msa0417520:five_prime_UTR |
TATAGGTTAGACAATACACA+CGG | 0.684699 | 3_2:+64745095 | Msa0417530:intron |
ATTACCTATTACCATCAGGG+TGG | 0.691674 | 3_2:-64750386 | None:intergenic |
GACTGCCAACAAATATCCCG+AGG | 0.701770 | 3_2:-64750337 | None:intergenic |
TGTTTCCTTGGCTATCACAG+AGG | 0.702795 | 3_2:+64746150 | Msa0417530:CDS |
GTTGGTGATATCCAGAACAA+GGG | 0.711490 | 3_2:+64745928 | Msa0417530:CDS |
GGACAAAGTAGTCGAACATG+CGG | 0.723999 | 3_2:+64750000 | Msa0417530:CDS |
ATAGGTTAGACAATACACAC+GGG | 0.767552 | 3_2:+64745096 | Msa0417530:intron |
GTAGTTGTAAACCCTCCTTG+TGG | 0.780824 | 3_2:-64745172 | None:intergenic |
TATTGTACAAGAAAAGAACG+AGG | 0.782276 | 3_2:+64749979 | Msa0417530:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATGTTGTTTATATAATT+TGG | - | chr3_2:64743199-64743218 | None:intergenic | 10.0% |
!!! | TTTTATTTGATTTTTGTTTT+TGG | + | chr3_2:64743865-64743884 | Msa0417530:intron | 10.0% |
!! | TTTAGTTAAAGTTAAATTAT+TGG | + | chr3_2:64744699-64744718 | Msa0417530:intron | 10.0% |
!! | AATATGTTTATTACAATTAT+AGG | + | chr3_2:64745078-64745097 | Msa0417530:intron | 10.0% |
!! | AGGTAAATAAAAAAAAAAAT+TGG | - | chr3_2:64745817-64745836 | None:intergenic | 10.0% |
!! | ACTTAAAATATAACTTAAAA+GGG | - | chr3_2:64745994-64746013 | None:intergenic | 10.0% |
!! | AACTTAAAATATAACTTAAA+AGG | - | chr3_2:64745995-64746014 | None:intergenic | 10.0% |
!!! | AATTTATTTTAATGTCATTT+TGG | + | chr3_2:64746981-64747000 | Msa0417530:intron | 10.0% |
!!! | TGTTTTTAGTTAAATATTTA+TGG | + | chr3_2:64749454-64749473 | Msa0417530:intron | 10.0% |
!! | ATACTGAAAATTTATATGTT+GGG | - | chr3_2:64742719-64742738 | Msa0417520:five_prime_UTR | 15.0% |
!! | AATACTGAAAATTTATATGT+TGG | - | chr3_2:64742720-64742739 | Msa0417520:five_prime_UTR | 15.0% |
!!! | TAACACTAATTTTTATTGAT+GGG | + | chr3_2:64743367-64743386 | Msa0417530:intron | 15.0% |
!!! | TGATTCAGTTAATTTTAATT+TGG | - | chr3_2:64743454-64743473 | None:intergenic | 15.0% |
!!! | GTGAATTGTTTTTAAAATAA+CGG | - | chr3_2:64743499-64743518 | None:intergenic | 15.0% |
!!! | TAAGGTATAAATTAGTTTAT+GGG | + | chr3_2:64743785-64743804 | Msa0417530:intron | 15.0% |
!!! | TATCATTGATTTTGATTTTT+GGG | + | chr3_2:64743837-64743856 | Msa0417530:intron | 15.0% |
!! | AAAACAATTAAATTCGTAAA+AGG | + | chr3_2:64744198-64744217 | Msa0417530:intron | 15.0% |
!!! | GACTAAAAAATTCAAAATTT+TGG | + | chr3_2:64744220-64744239 | Msa0417530:intron | 15.0% |
!!! | AAAATTCAAAATTTTGGTTT+TGG | + | chr3_2:64744226-64744245 | Msa0417530:intron | 15.0% |
!! | AATAATAAAAATAAGTAGTG+AGG | - | chr3_2:64744666-64744685 | None:intergenic | 15.0% |
!! | ACAATATTCTCATAAAAAAA+AGG | - | chr3_2:64745014-64745033 | None:intergenic | 15.0% |
!! | TCTATAATGAATTAAATTCA+TGG | + | chr3_2:64745344-64745363 | Msa0417530:intron | 15.0% |
!! | AAAAAGAAAAGAATTAAACT+TGG | - | chr3_2:64747356-64747375 | None:intergenic | 15.0% |
!!! | AGTATATTTTGTATTTTGTT+AGG | + | chr3_2:64747592-64747611 | Msa0417530:intron | 15.0% |
!! | TTAGTTAGTTAGTTAAAAAA+TGG | + | chr3_2:64748562-64748581 | Msa0417530:intron | 15.0% |
!! | TAGTTAGTTAGTTAAAAAAT+GGG | + | chr3_2:64748563-64748582 | Msa0417530:intron | 15.0% |
!!! | AATTTTACCTTCAAATATTT+TGG | + | chr3_2:64748718-64748737 | Msa0417530:intron | 15.0% |
!!! | ATTTTACCTTCAAATATTTT+GGG | + | chr3_2:64748719-64748738 | Msa0417530:intron | 15.0% |
!!! | AGTCTTATTTTTTCAATTAT+TGG | + | chr3_2:64748893-64748912 | Msa0417530:intron | 15.0% |
!!! | AAATTTTCAAATGAATAACA+AGG | - | chr3_2:64749185-64749204 | None:intergenic | 15.0% |
!! | GTTATAGAAATTAAAAAAGT+TGG | + | chr3_2:64749212-64749231 | Msa0417530:intron | 15.0% |
!!! | AATTAAAAGCAATTAGTTTT+GGG | - | chr3_2:64749315-64749334 | None:intergenic | 15.0% |
!!! | TAATTAAAAGCAATTAGTTT+TGG | - | chr3_2:64749316-64749335 | None:intergenic | 15.0% |
!! | ACAATATTAATTATTGAACT+CGG | + | chr3_2:64749779-64749798 | Msa0417530:intron | 15.0% |
!! | TTTCAATTTATATCATAATC+AGG | - | chr3_2:64750604-64750623 | None:intergenic | 15.0% |
!!! | TATTTTCTACAAATTAACTA+AGG | + | chr3_2:64750740-64750759 | Msa0417530:three_prime_UTR | 15.0% |
!!! | TTATATTATTTTCTCTTGAT+AGG | + | chr3_2:64750930-64750949 | Msa0417530:three_prime_UTR | 15.0% |
!! | TACTGAAAATTTATATGTTG+GGG | - | chr3_2:64742718-64742737 | Msa0417520:five_prime_UTR | 20.0% |
!! | AATATTATTTACAATTGTGG+AGG | + | chr3_2:64743049-64743068 | Msa0417530:intron | 20.0% |
!! | ATATTATTTACAATTGTGGA+GGG | + | chr3_2:64743050-64743069 | Msa0417530:intron | 20.0% |
!!! | TATAATTTGGATAAAGCATT+TGG | - | chr3_2:64743186-64743205 | None:intergenic | 20.0% |
!!! | CTAACACTAATTTTTATTGA+TGG | + | chr3_2:64743366-64743385 | Msa0417530:intron | 20.0% |
!!! | AACACTAATTTTTATTGATG+GGG | + | chr3_2:64743368-64743387 | Msa0417530:intron | 20.0% |
!!! | AATTTTAATTTGGTTCAGTT+CGG | - | chr3_2:64743444-64743463 | None:intergenic | 20.0% |
!!! | TTGTTTTTAAAATAACGGTT+CGG | - | chr3_2:64743494-64743513 | None:intergenic | 20.0% |
!! | TATGATTAATTGAGATGTAA+TGG | - | chr3_2:64743575-64743594 | None:intergenic | 20.0% |
!! | CATAAACTAATTTATACCTT+AGG | - | chr3_2:64743786-64743805 | None:intergenic | 20.0% |
!!! | CTAAGGTATAAATTAGTTTA+TGG | + | chr3_2:64743784-64743803 | Msa0417530:intron | 20.0% |
!!! | TGTTTTTTGAGTTTTGTTTT+TGG | + | chr3_2:64743813-64743832 | Msa0417530:intron | 20.0% |
!!! | GTTTTTTGAGTTTTGTTTTT+GGG | + | chr3_2:64743814-64743833 | Msa0417530:intron | 20.0% |
!!! | GTATCATTGATTTTGATTTT+TGG | + | chr3_2:64743836-64743855 | Msa0417530:intron | 20.0% |
!!! | ATTTTGTTTGATTTTTGTCT+GGG | + | chr3_2:64743893-64743912 | Msa0417530:intron | 20.0% |
!!! | ATAAGTGTTTCTATATTGTT+TGG | + | chr3_2:64744060-64744079 | Msa0417530:intron | 20.0% |
!! | GAAACAATCAAATAGATATA+TGG | - | chr3_2:64744101-64744120 | None:intergenic | 20.0% |
!! | ATCATTTCATTACTTAAGAA+AGG | - | chr3_2:64744123-64744142 | None:intergenic | 20.0% |
!!! | AAATTGTCATTTTTTAGTGA+TGG | + | chr3_2:64744539-64744558 | Msa0417530:intron | 20.0% |
!! | AAAGATTAAAAGTCACATTA+AGG | + | chr3_2:64744722-64744741 | Msa0417530:intron | 20.0% |
!!! | ATTAAGGCATTAATTACAAA+AGG | + | chr3_2:64744738-64744757 | Msa0417530:intron | 20.0% |
!!! | GACGTTTTAGAAAATAAAAA+AGG | - | chr3_2:64744943-64744962 | None:intergenic | 20.0% |
!! | AATTCATGAATGAACTAAAT+TGG | - | chr3_2:64745599-64745618 | None:intergenic | 20.0% |
!!! | ATTTTTCACTATCTGATTAT+GGG | - | chr3_2:64745752-64745771 | None:intergenic | 20.0% |
!!! | AATTTTTCACTATCTGATTA+TGG | - | chr3_2:64745753-64745772 | None:intergenic | 20.0% |
!! | AGTGTTAAATTTAACACTTA+AGG | + | chr3_2:64746265-64746284 | Msa0417530:intron | 20.0% |
!! | TAATATTCTGGTAAAAGTAA+TGG | + | chr3_2:64746332-64746351 | Msa0417530:intron | 20.0% |
!! | TAGCTAATAGTATAATACAT+GGG | - | chr3_2:64746924-64746943 | None:intergenic | 20.0% |
!! | TTAGCTAATAGTATAATACA+TGG | - | chr3_2:64746925-64746944 | None:intergenic | 20.0% |
!!! | CTTCTCAAATTTGTTAAAAA+AGG | - | chr3_2:64747146-64747165 | None:intergenic | 20.0% |
!!! | TTTGATCTATTTTTGAATCA+AGG | + | chr3_2:64747169-64747188 | Msa0417530:CDS | 20.0% |
!!! | ATTTTGTATTTTGTTAGGAT+AGG | + | chr3_2:64747597-64747616 | Msa0417530:intron | 20.0% |
!!! | TTTTGTATTTTGTTAGGATA+GGG | + | chr3_2:64747598-64747617 | Msa0417530:intron | 20.0% |
!! | AAACTGTAAGTAATCATAAT+GGG | + | chr3_2:64748216-64748235 | Msa0417530:intron | 20.0% |
!! | AGTTAGTTAGTTAAAAAATG+GGG | + | chr3_2:64748564-64748583 | Msa0417530:intron | 20.0% |
!! | GAACCAATTTAAATATTTGA+GGG | - | chr3_2:64749087-64749106 | None:intergenic | 20.0% |
!! | AGAACCAATTTAAATATTTG+AGG | - | chr3_2:64749088-64749107 | None:intergenic | 20.0% |
!!! | TATACACATAAAAGTTTTAC+AGG | + | chr3_2:64749277-64749296 | Msa0417530:intron | 20.0% |
!!! | TTTTTGGTAAATGTCAATTT+TGG | - | chr3_2:64749409-64749428 | None:intergenic | 20.0% |
!! | TAACTAAAAACATAACACTT+TGG | - | chr3_2:64749446-64749465 | None:intergenic | 20.0% |
!! | TTTAAGAAAATATGGATGTT+CGG | - | chr3_2:64749490-64749509 | None:intergenic | 20.0% |
!! | TAATATTGTGAAAACATGTT+GGG | - | chr3_2:64749768-64749787 | None:intergenic | 20.0% |
!! | TTAATATTGTGAAAACATGT+TGG | - | chr3_2:64749769-64749788 | None:intergenic | 20.0% |
!!! | TTCAGATATTTTTGTAAATC+AGG | - | chr3_2:64750059-64750078 | None:intergenic | 20.0% |
!!! | GATAATTGCTTTTATTTGTA+GGG | + | chr3_2:64750306-64750325 | Msa0417530:intron | 20.0% |
!! | AGCAATATAGCTAAAAATTT+AGG | + | chr3_2:64750766-64750785 | Msa0417530:three_prime_UTR | 20.0% |
!! | GTTTAGTTAATCATTTGTAA+AGG | + | chr3_2:64750968-64750987 | Msa0417530:three_prime_UTR | 20.0% |
! | ACTGAAAATTTATATGTTGG+GGG | - | chr3_2:64742717-64742736 | Msa0417520:five_prime_UTR | 25.0% |
! | AGATTGTAATCACATTCATA+TGG | - | chr3_2:64742876-64742895 | Msa0417520:five_prime_UTR | 25.0% |
! | TTTGACCATTAGCTAATATT+AGG | + | chr3_2:64742975-64742994 | Msa0417530:intron | 25.0% |
! | AATAAAAGTTTAGACTAGAC+AGG | - | chr3_2:64743002-64743021 | None:intergenic | 25.0% |
! | CGCAATATTATTTACAATTG+TGG | + | chr3_2:64743046-64743065 | Msa0417530:intron | 25.0% |
!!! | AGTTGTGTATAGTCATTTTT+CGG | - | chr3_2:64743103-64743122 | None:intergenic | 25.0% |
!! | ATATTCATTGAAACCCATTT+TGG | + | chr3_2:64743149-64743168 | Msa0417530:intron | 25.0% |
!!! | GATTTTGTTTGATTTTTGTC+TGG | + | chr3_2:64743892-64743911 | Msa0417530:intron | 25.0% |
!!! | TTTTGTTTCTGGTATGATTT+TGG | + | chr3_2:64743924-64743943 | Msa0417530:intron | 25.0% |
!!! | TTTGTTTCTGGTATGATTTT+GGG | + | chr3_2:64743925-64743944 | Msa0417530:intron | 25.0% |
!! | TTGTTTGGACTTGTTTAATT+AGG | + | chr3_2:64744075-64744094 | Msa0417530:intron | 25.0% |
!!! | TCAAAATTTTGGTTTTGGTT+CGG | + | chr3_2:64744231-64744250 | Msa0417530:intron | 25.0% |
!!! | CAAATTTGTTAGAGAATGAA+AGG | - | chr3_2:64744442-64744461 | None:intergenic | 25.0% |
! | AAACGACTATTATTTAGAGA+CGG | - | chr3_2:64744574-64744593 | None:intergenic | 25.0% |
! | CTCTAAATAATAGTCGTTTA+AGG | + | chr3_2:64744575-64744594 | Msa0417530:intron | 25.0% |
! | TAAAAAAGGTAGCAAAATGT+TGG | - | chr3_2:64744929-64744948 | None:intergenic | 25.0% |
! | ATTCATGGTTATTGAACAAT+TGG | + | chr3_2:64745359-64745378 | Msa0417530:intron | 25.0% |
! | GAACTCTGAATGTAAAATAA+TGG | - | chr3_2:64745547-64745566 | None:intergenic | 25.0% |
! | AAGAAGATCTTAAACATACT+GGG | - | chr3_2:64745849-64745868 | None:intergenic | 25.0% |
! | AAAGAAGATCTTAAACATAC+TGG | - | chr3_2:64745850-64745869 | None:intergenic | 25.0% |
! | TGTGTACAAGTTTAATATTC+TGG | + | chr3_2:64746320-64746339 | Msa0417530:intron | 25.0% |
! | TATCTACTAAAATGCAAACT+TGG | + | chr3_2:64746435-64746454 | Msa0417530:intron | 25.0% |
!!! | TTGATTTTAACATCAATGCA+CGG | - | chr3_2:64746751-64746770 | None:intergenic | 25.0% |
!! | TACTTAAACGGATTTAAAGT+TGG | + | chr3_2:64746787-64746806 | Msa0417530:CDS | 25.0% |
!! | CTTCTTTGATTTATATGTAG+AGG | - | chr3_2:64746827-64746846 | None:intergenic | 25.0% |
! | TAATAGTATAATACATGGGA+TGG | - | chr3_2:64746920-64746939 | None:intergenic | 25.0% |
!!! | ATTTTAATGTCATTTTGGTG+AGG | + | chr3_2:64746986-64747005 | Msa0417530:intron | 25.0% |
! | TTCTCTTAGAACTGTATTTA+AGG | - | chr3_2:64747077-64747096 | None:intergenic | 25.0% |
!! | AAATGTATATTTTGCGGAAA+GGG | + | chr3_2:64747223-64747242 | Msa0417530:intron | 25.0% |
! | GGTAAAAGGGATTTATAATA+GGG | + | chr3_2:64747244-64747263 | Msa0417530:intron | 25.0% |
! | AAAGAATTAAACTTGGCATA+GGG | - | chr3_2:64747349-64747368 | None:intergenic | 25.0% |
! | AAAAGAATTAAACTTGGCAT+AGG | - | chr3_2:64747350-64747369 | None:intergenic | 25.0% |
! | AAAAGTAGTTAGGAAAGTTA+GGG | + | chr3_2:64747536-64747555 | Msa0417530:intron | 25.0% |
!! | GATTGGTTGGTTAAATAAAT+GGG | + | chr3_2:64747689-64747708 | Msa0417530:intron | 25.0% |
!! | ATTGGTTGGTTAAATAAATG+GGG | + | chr3_2:64747690-64747709 | Msa0417530:intron | 25.0% |
! | TGTTATTGAATGAATCATAG+AGG | - | chr3_2:64747817-64747836 | None:intergenic | 25.0% |
! | CAAACTGTAAGTAATCATAA+TGG | + | chr3_2:64748215-64748234 | Msa0417530:intron | 25.0% |
! | ATTAAATCCAAACATAAGCT+TGG | - | chr3_2:64748301-64748320 | None:intergenic | 25.0% |
! | AAGCTTATGTTTGGATTTAA+TGG | + | chr3_2:64748300-64748319 | Msa0417530:intron | 25.0% |
! | AGCTTATGTTTGGATTTAAT+GGG | + | chr3_2:64748301-64748320 | Msa0417530:intron | 25.0% |
! | CTCTTTGAATTCCATAAATT+TGG | - | chr3_2:64748333-64748352 | None:intergenic | 25.0% |
! | ATTCTTTCTACTATATGTTG+AGG | - | chr3_2:64748384-64748403 | None:intergenic | 25.0% |
! | TAAAAAATGGGGAGAAATAT+AGG | + | chr3_2:64748575-64748594 | Msa0417530:intron | 25.0% |
! | AAAAAATGGGGAGAAATATA+GGG | + | chr3_2:64748576-64748595 | Msa0417530:intron | 25.0% |
! | TTGAATAAATGACTGAGAAT+AGG | - | chr3_2:64748677-64748696 | None:intergenic | 25.0% |
! | TTGCCCTCAAATATTTAAAT+TGG | + | chr3_2:64749081-64749100 | Msa0417530:intron | 25.0% |
! | AGACTTTCAGAAAAGTTTAA+AGG | - | chr3_2:64749240-64749259 | None:intergenic | 25.0% |
! | CATAGTTAATTTCCGATATA+GGG | + | chr3_2:64749348-64749367 | Msa0417530:intron | 25.0% |
! | ATAGTTAATTTCCGATATAG+GGG | + | chr3_2:64749349-64749368 | Msa0417530:intron | 25.0% |
!!! | GGTTGTTTACTTCTTATTTT+TGG | - | chr3_2:64749425-64749444 | None:intergenic | 25.0% |
! | TTAAGAAAATATGGATGTTC+GGG | - | chr3_2:64749489-64749508 | None:intergenic | 25.0% |
! | ATAGCAGGTTTAAGAAAATA+TGG | - | chr3_2:64749498-64749517 | None:intergenic | 25.0% |
! | TAACCTATTATGTTAAATGC+AGG | + | chr3_2:64749596-64749615 | Msa0417530:intron | 25.0% |
! | AATCCTGCATTTAACATAAT+AGG | - | chr3_2:64749602-64749621 | None:intergenic | 25.0% |
!! | TACTTTTACTTCAATCATGA+AGG | + | chr3_2:64749726-64749745 | Msa0417530:intron | 25.0% |
! | ATCGATATAAACATTGAATG+TGG | - | chr3_2:64750233-64750252 | None:intergenic | 25.0% |
!!! | CGATAATTGCTTTTATTTGT+AGG | + | chr3_2:64750305-64750324 | Msa0417530:intron | 25.0% |
! | AAAAAACGTGATAAGTTTGA+GGG | - | chr3_2:64750857-64750876 | None:intergenic | 25.0% |
GTTAAGCAGAATATGAGTTT+GGG | - | chr3_2:64742681-64742700 | Msa0417520:five_prime_UTR | 30.0% | |
CTACTACTATTGCTACTATT+CGG | + | chr3_2:64742807-64742826 | Msa0417530:intron | 30.0% | |
TATTTGTGCATGCAATTTCT+TGG | + | chr3_2:64743018-64743037 | Msa0417530:intron | 30.0% | |
CTATACACAACTTTATCAGA+AGG | + | chr3_2:64743111-64743130 | Msa0417530:intron | 30.0% | |
GGATGTCTAATAACCAAAAT+GGG | - | chr3_2:64743165-64743184 | None:intergenic | 30.0% | |
TGGATGTCTAATAACCAAAA+TGG | - | chr3_2:64743166-64743185 | None:intergenic | 30.0% | |
! | TTTATTGATGGGGTATTTGT+AGG | + | chr3_2:64743378-64743397 | Msa0417530:intron | 30.0% |
AATTCACTAACTGAATCGAA+CGG | + | chr3_2:64743512-64743531 | Msa0417530:intron | 30.0% | |
AATCGAACGGTTATTAAACT+CGG | + | chr3_2:64743525-64743544 | Msa0417530:intron | 30.0% | |
AAATCAATGAGGTCACATTT+CGG | - | chr3_2:64743702-64743721 | None:intergenic | 30.0% | |
ATATAGCATATGTTGTGCTA+AGG | + | chr3_2:64744004-64744023 | Msa0417530:intron | 30.0% | |
TCGGTTAATAGATATGCAAA+TGG | + | chr3_2:64744260-64744279 | Msa0417530:intron | 30.0% | |
AGAGCAAATACAAATACCTA+GGG | - | chr3_2:64744418-64744437 | None:intergenic | 30.0% | |
AAGAGCAAATACAAATACCT+AGG | - | chr3_2:64744419-64744438 | None:intergenic | 30.0% | |
TCTAACAAATTTGATGCCAT+TGG | + | chr3_2:64744449-64744468 | Msa0417530:intron | 30.0% | |
TTATGAAAGACACAATCCAT+CGG | - | chr3_2:64744488-64744507 | None:intergenic | 30.0% | |
AAACGTCAATAATACTGAGA+CGG | + | chr3_2:64744956-64744975 | Msa0417530:intron | 30.0% | |
TATAGGTTAGACAATACACA+CGG | + | chr3_2:64745095-64745114 | Msa0417530:intron | 30.0% | |
TGAGTGTATATGTTGAAAGA+TGG | - | chr3_2:64745197-64745216 | None:intergenic | 30.0% | |
TCTTTCAACATATACACTCA+TGG | + | chr3_2:64745197-64745216 | Msa0417530:CDS | 30.0% | |
!!! | TCCTCTATTTTTATCAGTTG+TGG | + | chr3_2:64745416-64745435 | Msa0417530:CDS | 30.0% |
TCCACAACTGATAAAAATAG+AGG | - | chr3_2:64745420-64745439 | None:intergenic | 30.0% | |
CATGAATGAACTAAATTGGA+AGG | - | chr3_2:64745595-64745614 | None:intergenic | 30.0% | |
TCTCTTTCTACCAATCAATT+TGG | + | chr3_2:64745618-64745637 | Msa0417530:CDS | 30.0% | |
AAAACACCAAGAACAGAAAA+AGG | - | chr3_2:64745710-64745729 | None:intergenic | 30.0% | |
!! | TGGTGTTTTAGATTATGCAT+TGG | + | chr3_2:64745721-64745740 | Msa0417530:intron | 30.0% |
!! | GTTTTAGATTATGCATTGGT+TGG | + | chr3_2:64745725-64745744 | Msa0417530:intron | 30.0% |
ATCTTAAGCACAAGAAAGTT+TGG | - | chr3_2:64745785-64745804 | None:intergenic | 30.0% | |
! | GTTTTCTTTTACTCTGCAAA+TGG | + | chr3_2:64746093-64746112 | Msa0417530:CDS | 30.0% |
GAAACAACATACTGAACTAA+AGG | - | chr3_2:64746136-64746155 | None:intergenic | 30.0% | |
!!! | AGCACTTGGTTTTAAATTAC+TGG | + | chr3_2:64746202-64746221 | Msa0417530:intron | 30.0% |
!!! | ATGGTGCTTTTTTGTGAATA+TGG | + | chr3_2:64746351-64746370 | Msa0417530:intron | 30.0% |
! | TGCATATAACTTCACAGTTT+TGG | - | chr3_2:64746377-64746396 | None:intergenic | 30.0% |
TACTAAAATGCAAACTTGGT+TGG | + | chr3_2:64746439-64746458 | Msa0417530:intron | 30.0% | |
ATTTGTCGTTCATGCTTAAT+AGG | - | chr3_2:64746512-64746531 | None:intergenic | 30.0% | |
TATTAAGCATGAACGACAAA+TGG | + | chr3_2:64746511-64746530 | Msa0417530:intron | 30.0% | |
! | TTCAAAAGCTGAATGGTTTT+TGG | + | chr3_2:64746586-64746605 | Msa0417530:intron | 30.0% |
ATAAATGCTTGCTTTGTGTT+TGG | + | chr3_2:64746625-64746644 | Msa0417530:intron | 30.0% | |
TAAGATACTGTGACAAATCA+TGG | - | chr3_2:64746671-64746690 | None:intergenic | 30.0% | |
! | AAAGTGTTACAAAAATGCAC+AGG | - | chr3_2:64746713-64746732 | None:intergenic | 30.0% |
! | TTTGTAACACTTTTCATTCC+AGG | + | chr3_2:64746720-64746739 | Msa0417530:intron | 30.0% |
! | TTGTAACACTTTTCATTCCA+GGG | + | chr3_2:64746721-64746740 | Msa0417530:intron | 30.0% |
! | GCATTGATGTTAAAATCAAG+TGG | + | chr3_2:64746752-64746771 | Msa0417530:CDS | 30.0% |
CCAAATGATCTGTACTTAAA+CGG | + | chr3_2:64746775-64746794 | Msa0417530:CDS | 30.0% | |
! | TTAAACGGATTTAAAGTTGG+AGG | + | chr3_2:64746790-64746809 | Msa0417530:CDS | 30.0% |
GTGAACAGGATTTAATATAC+TGG | - | chr3_2:64746949-64746968 | None:intergenic | 30.0% | |
AACAAATTCCATGATTTCAC+AGG | + | chr3_2:64747013-64747032 | Msa0417530:intron | 30.0% | |
ACTGTATTTAAGGATGTTGT+TGG | - | chr3_2:64747067-64747086 | None:intergenic | 30.0% | |
!! | GAACATCTTCTCTTTGAAAT+TGG | - | chr3_2:64747117-64747136 | None:intergenic | 30.0% |
ATTTCAAAGAGAAGATGTTC+TGG | + | chr3_2:64747117-64747136 | Msa0417530:CDS | 30.0% | |
! | CGAACCAAATGTATATTTTG+CGG | + | chr3_2:64747217-64747236 | Msa0417530:intron | 30.0% |
CTTTCCGCAAAATATACATT+TGG | - | chr3_2:64747224-64747243 | None:intergenic | 30.0% | |
! | CAAATGTATATTTTGCGGAA+AGG | + | chr3_2:64747222-64747241 | Msa0417530:intron | 30.0% |
GGGTAAAAGGGATTTATAAT+AGG | + | chr3_2:64747243-64747262 | Msa0417530:intron | 30.0% | |
AAGAATTAAACTTGGCATAG+GGG | - | chr3_2:64747348-64747367 | None:intergenic | 30.0% | |
ATAACAACTAGGGTTTATAG+AGG | - | chr3_2:64747501-64747520 | None:intergenic | 30.0% | |
CAAAAGTAGTTAGGAAAGTT+AGG | + | chr3_2:64747535-64747554 | Msa0417530:intron | 30.0% | |
!! | GGATTGGTTGGTTAAATAAA+TGG | + | chr3_2:64747688-64747707 | Msa0417530:intron | 30.0% |
! | TTGGTTGGTTAAATAAATGG+GGG | + | chr3_2:64747691-64747710 | Msa0417530:intron | 30.0% |
GAATTCCATAAATTTGGACT+TGG | - | chr3_2:64748327-64748346 | None:intergenic | 30.0% | |
TTAACTGTAGACGAATTGTT+GGG | - | chr3_2:64748359-64748378 | None:intergenic | 30.0% | |
ATTAACTGTAGACGAATTGT+TGG | - | chr3_2:64748360-64748379 | None:intergenic | 30.0% | |
TCTATGATAAGTGATCATCA+AGG | + | chr3_2:64748416-64748435 | Msa0417530:intron | 30.0% | |
CTATATGTTTGATCACTCAA+TGG | + | chr3_2:64748455-64748474 | Msa0417530:intron | 30.0% | |
! | CCTATAAGGTCCAATTTTAA+TGG | - | chr3_2:64748484-64748503 | None:intergenic | 30.0% |
CCATTAAAATTGGACCTTAT+AGG | + | chr3_2:64748481-64748500 | Msa0417530:intron | 30.0% | |
!! | TAACTACTTTTGCACCTATA+AGG | - | chr3_2:64748498-64748517 | None:intergenic | 30.0% |
TTATAGGTGCAAAAGTAGTT+AGG | + | chr3_2:64748497-64748516 | Msa0417530:intron | 30.0% | |
TATAGGTGCAAAAGTAGTTA+GGG | + | chr3_2:64748498-64748517 | Msa0417530:intron | 30.0% | |
AAAAATGGGGAGAAATATAG+GGG | + | chr3_2:64748577-64748596 | Msa0417530:intron | 30.0% | |
GATTCGATAGTTGTTATGAA+CGG | + | chr3_2:64748618-64748637 | Msa0417530:intron | 30.0% | |
TAAGAGCCCAAAATATTTGA+AGG | - | chr3_2:64748728-64748747 | None:intergenic | 30.0% | |
AAGAAGAAAAATCACTCACT+TGG | + | chr3_2:64748815-64748834 | Msa0417530:intron | 30.0% | |
ACTACTAAACGAATAACAAG+GGG | - | chr3_2:64748876-64748895 | None:intergenic | 30.0% | |
GACTACTAAACGAATAACAA+GGG | - | chr3_2:64748877-64748896 | None:intergenic | 30.0% | |
AGACTACTAAACGAATAACA+AGG | - | chr3_2:64748878-64748897 | None:intergenic | 30.0% | |
GGTGACAAAAAAAAAAGAGA+AGG | - | chr3_2:64748919-64748938 | None:intergenic | 30.0% | |
ATACACTTATGACAAAGCTA+AGG | - | chr3_2:64749033-64749052 | None:intergenic | 30.0% | |
CCTATATCGGAAATTAACTA+TGG | - | chr3_2:64749350-64749369 | None:intergenic | 30.0% | |
CCATAGTTAATTTCCGATAT+AGG | + | chr3_2:64749347-64749366 | Msa0417530:intron | 30.0% | |
AGATGTATACAACATCACAT+TGG | - | chr3_2:64749378-64749397 | None:intergenic | 30.0% | |
ATCCGACGTTTAAGAAAATT+TGG | + | chr3_2:64749569-64749588 | Msa0417530:intron | 30.0% | |
! | CTCCAAATTTTCTTAAACGT+CGG | - | chr3_2:64749574-64749593 | None:intergenic | 30.0% |
CTTGTAATATAGTTCCTCTA+GGG | - | chr3_2:64749630-64749649 | None:intergenic | 30.0% | |
TCTTGTAATATAGTTCCTCT+AGG | - | chr3_2:64749631-64749650 | None:intergenic | 30.0% | |
AGGAACTATATTACAAGACA+TGG | + | chr3_2:64749633-64749652 | Msa0417530:CDS | 30.0% | |
! | AATAAAAGCGCATGATAAAG+AGG | - | chr3_2:64749702-64749721 | None:intergenic | 30.0% |
ATCCTAGTTATGCTTTCATT+TGG | + | chr3_2:64749860-64749879 | Msa0417530:intron | 30.0% | |
! | TTCCAAATGAAAGCATAACT+AGG | - | chr3_2:64749865-64749884 | None:intergenic | 30.0% |
TTATTGCATACTAGTATACG+TGG | + | chr3_2:64749898-64749917 | Msa0417530:intron | 30.0% | |
TATTGTACAAGAAAAGAACG+AGG | + | chr3_2:64749979-64749998 | Msa0417530:CDS | 30.0% | |
TACAGCAAATTTCACATCAA+TGG | - | chr3_2:64750099-64750118 | None:intergenic | 30.0% | |
!!! | TACAGCTTTGACTTTTTCAA+AGG | + | chr3_2:64750648-64750667 | Msa0417530:intron | 30.0% |
GAAAAAACGTGATAAGTTTG+AGG | - | chr3_2:64750858-64750877 | None:intergenic | 30.0% | |
TAACTAAACAATCATGAGCT+TGG | - | chr3_2:64750957-64750976 | None:intergenic | 30.0% | |
TAATCATTTGTAAAGGAGTG+TGG | + | chr3_2:64750975-64750994 | Msa0417530:three_prime_UTR | 30.0% | |
GGTTAAGCAGAATATGAGTT+TGG | - | chr3_2:64742682-64742701 | Msa0417520:five_prime_UTR | 35.0% | |
ACTCATATTCTGCTTAACCT+CGG | + | chr3_2:64742683-64742702 | Msa0417530:CDS | 35.0% | |
GAAAATTTATATGTTGGGGG+CGG | - | chr3_2:64742714-64742733 | Msa0417520:five_prime_UTR | 35.0% | |
TGAAGAAAATCGCAGAGAAA+GGG | - | chr3_2:64742743-64742762 | Msa0417520:five_prime_UTR | 35.0% | |
TTGAAGAAAATCGCAGAGAA+AGG | - | chr3_2:64742744-64742763 | Msa0417520:five_prime_UTR | 35.0% | |
! | TTTCTCTGCGATTTTCTTCA+AGG | + | chr3_2:64742743-64742762 | Msa0417530:CDS | 35.0% |
! | TTCTCTGCGATTTTCTTCAA+GGG | + | chr3_2:64742744-64742763 | Msa0417530:CDS | 35.0% |
GTTGATTGTGTGTTTCTTTG+TGG | + | chr3_2:64742902-64742921 | Msa0417530:intron | 35.0% | |
CAGGTCCTAATATTAGCTAA+TGG | - | chr3_2:64742983-64743002 | None:intergenic | 35.0% | |
!! | AGCGGATATTGGTTTATGTT+TGG | - | chr3_2:64743252-64743271 | None:intergenic | 35.0% |
! | AAAGTAAGTTGAGCGGATAT+TGG | - | chr3_2:64743263-64743282 | None:intergenic | 35.0% |
!! | AAGTATGTGGTTTGGTTATG+CGG | - | chr3_2:64743292-64743311 | None:intergenic | 35.0% |
! | AAAGCACTAAGTATGTGGTT+TGG | - | chr3_2:64743300-64743319 | None:intergenic | 35.0% |
AAACCACATACTTAGTGCTT+TGG | + | chr3_2:64743299-64743318 | Msa0417530:intron | 35.0% | |
! | AATCGTTTCGGTTCAGTTTT+TGG | - | chr3_2:64743419-64743438 | None:intergenic | 35.0% |
TTCAGTTCGGTTAATCGTTT+CGG | - | chr3_2:64743431-64743450 | None:intergenic | 35.0% | |
TGAGATGTAATGGTTCAGTT+CGG | - | chr3_2:64743565-64743584 | None:intergenic | 35.0% | |
TGAGAATCGCAAAATCAATG+AGG | - | chr3_2:64743713-64743732 | None:intergenic | 35.0% | |
!! | GGGTATGATGATTTTGTTTC+TGG | + | chr3_2:64743913-64743932 | Msa0417530:intron | 35.0% |
!! | GTGCTAAGGTTGCTTATTTT+TGG | + | chr3_2:64744018-64744037 | Msa0417530:intron | 35.0% |
!!! | ATTTTGGTTTTGGTTCGGTT+CGG | + | chr3_2:64744236-64744255 | Msa0417530:intron | 35.0% |
ACTGAACCAAAGTTATGGTT+CGG | - | chr3_2:64744290-64744309 | None:intergenic | 35.0% | |
! | ACCATAACTTTGGTTCAGTT+CGG | + | chr3_2:64744291-64744310 | Msa0417530:intron | 35.0% |
! | GGTTAGTTCCAAACCTTAAA+CGG | + | chr3_2:64744312-64744331 | Msa0417530:intron | 35.0% |
AAACCTTAAACGGTTCAGTT+CGG | + | chr3_2:64744322-64744341 | Msa0417530:intron | 35.0% | |
AAATACAAATACCTAGGGGT+GGG | - | chr3_2:64744413-64744432 | None:intergenic | 35.0% | |
GAGCAAATACAAATACCTAG+GGG | - | chr3_2:64744417-64744436 | None:intergenic | 35.0% | |
GACTATTATTTAGAGACGGA+GGG | - | chr3_2:64744570-64744589 | None:intergenic | 35.0% | |
! | AAGAAAGCACGTACAAATAG+AGG | + | chr3_2:64744835-64744854 | Msa0417530:intron | 35.0% |
ACAAATAGAGGAGGAGTAAA+AGG | + | chr3_2:64744847-64744866 | Msa0417530:intron | 35.0% | |
ATAGGTTAGACAATACACAC+GGG | + | chr3_2:64745096-64745115 | Msa0417530:intron | 35.0% | |
GTTGTTCAGCTAACAATCTA+TGG | - | chr3_2:64745278-64745297 | None:intergenic | 35.0% | |
TAGATTGTTAGCTGAACAAC+TGG | + | chr3_2:64745278-64745297 | Msa0417530:intron | 35.0% | |
AGATTGTTAGCTGAACAACT+GGG | + | chr3_2:64745279-64745298 | Msa0417530:intron | 35.0% | |
TGGATAGTTCTTTCTTGTCA+GGG | - | chr3_2:64745527-64745546 | None:intergenic | 35.0% | |
ATGGATAGTTCTTTCTTGTC+AGG | - | chr3_2:64745528-64745547 | None:intergenic | 35.0% | |
TTTCTACCAATCAATTTGGC+AGG | + | chr3_2:64745622-64745641 | Msa0417530:CDS | 35.0% | |
ACTTAAAAGGGACAGAATCA+TGG | - | chr3_2:64745982-64746001 | None:intergenic | 35.0% | |
GCAGAGTAAAAGAAAACATC+AGG | - | chr3_2:64746090-64746109 | None:intergenic | 35.0% | |
! | TTCTTTTACTCTGCAAATGG+AGG | + | chr3_2:64746096-64746115 | Msa0417530:CDS | 35.0% |
!! | AGTTCAGTATGTTGTTTCCT+TGG | + | chr3_2:64746138-64746157 | Msa0417530:CDS | 35.0% |
GTGACAAAAATGTAAGCACT+TGG | + | chr3_2:64746188-64746207 | Msa0417530:intron | 35.0% | |
TTTCCCTAACCAAATTCACT+GGG | - | chr3_2:64746243-64746262 | None:intergenic | 35.0% | |
AGACAACTCTCATCATCATA+TGG | + | chr3_2:64746560-64746579 | Msa0417530:intron | 35.0% | |
ATGGAGTTTCAAAAGCTGAA+TGG | + | chr3_2:64746579-64746598 | Msa0417530:intron | 35.0% | |
CCGTTTAAGTACAGATCATT+TGG | - | chr3_2:64746778-64746797 | None:intergenic | 35.0% | |
AAGAAGTTCAATATCAGTGC+AGG | + | chr3_2:64746841-64746860 | Msa0417530:CDS | 35.0% | |
CAATATCAGTGCAGGTAATA+AGG | + | chr3_2:64746849-64746868 | Msa0417530:intron | 35.0% | |
! | TGCAGGTAATAAGGTATTCT+TGG | + | chr3_2:64746858-64746877 | Msa0417530:intron | 35.0% |
TTAAATTCTCTGCAGTGAAC+AGG | - | chr3_2:64746963-64746982 | None:intergenic | 35.0% | |
TTCCATGATTTCACAGGAAT+AGG | + | chr3_2:64747019-64747038 | Msa0417530:intron | 35.0% | |
ATCCTATTCCTGTGAAATCA+TGG | - | chr3_2:64747024-64747043 | None:intergenic | 35.0% | |
!! | AGTTCTAAGAGAATTGTCTG+TGG | + | chr3_2:64747084-64747103 | Msa0417530:CDS | 35.0% |
!! | GTTCTAAGAGAATTGTCTGT+GGG | + | chr3_2:64747085-64747104 | Msa0417530:CDS | 35.0% |
! | TATTTTGCGGAAAGGGTAAA+AGG | + | chr3_2:64747230-64747249 | Msa0417530:intron | 35.0% |
! | ATTTTGCGGAAAGGGTAAAA+GGG | + | chr3_2:64747231-64747250 | Msa0417530:intron | 35.0% |
! | AAATTGCTTGCTAACTTACC+AGG | + | chr3_2:64747298-64747317 | Msa0417530:intron | 35.0% |
AGTTGTGCTATGTCTTGTAA+TGG | + | chr3_2:64747379-64747398 | Msa0417530:intron | 35.0% | |
!! | GCCTTTACTATTGACTTAGA+GGG | + | chr3_2:64747401-64747420 | Msa0417530:intron | 35.0% |
ACCCTCTAAGTCAATAGTAA+AGG | - | chr3_2:64747405-64747424 | None:intergenic | 35.0% | |
! | GACATATGGTTGTTACCTTT+TGG | + | chr3_2:64747427-64747446 | Msa0417530:intron | 35.0% |
TTAGGAAAGTTAGGGTAGTT+AGG | + | chr3_2:64747544-64747563 | Msa0417530:intron | 35.0% | |
TTAACCAACCAATCCCTATA+AGG | - | chr3_2:64747683-64747702 | None:intergenic | 35.0% | |
! | TGGTTGGTTAAATAAATGGG+GGG | + | chr3_2:64747692-64747711 | Msa0417530:intron | 35.0% |
TAAATAAATGGGGGGAATGT+AGG | + | chr3_2:64747700-64747719 | Msa0417530:intron | 35.0% | |
AAATAAATGGGGGGAATGTA+GGG | + | chr3_2:64747701-64747720 | Msa0417530:intron | 35.0% | |
GAAGGATCATCATGTGAATT+TGG | + | chr3_2:64747728-64747747 | Msa0417530:intron | 35.0% | |
! | TCATCATGTGAATTTGGTGA+TGG | + | chr3_2:64747734-64747753 | Msa0417530:intron | 35.0% |
AGGAGAAATCCTTTGTACAT+TGG | + | chr3_2:64747761-64747780 | Msa0417530:intron | 35.0% | |
CAACAGTTTCCAATGTACAA+AGG | - | chr3_2:64747773-64747792 | None:intergenic | 35.0% | |
CTTTGTACATTGGAAACTGT+TGG | + | chr3_2:64747771-64747790 | Msa0417530:intron | 35.0% | |
! | TTCTCTTGTTTCCCAACAAT+TGG | + | chr3_2:64747879-64747898 | Msa0417530:intron | 35.0% |
AACCTGCCAGATATCTTATT+GGG | + | chr3_2:64747905-64747924 | Msa0417530:intron | 35.0% | |
ATATCTTATTGGGGGAAGAA+AGG | + | chr3_2:64747915-64747934 | Msa0417530:intron | 35.0% | |
TATCTTATTGGGGGAAGAAA+GGG | + | chr3_2:64747916-64747935 | Msa0417530:intron | 35.0% | |
TCCAAAACAGCAACAAAGTA+AGG | + | chr3_2:64748101-64748120 | Msa0417530:intron | 35.0% | |
!!! | ACCTTACTTTGTTGCTGTTT+TGG | - | chr3_2:64748105-64748124 | None:intergenic | 35.0% |
!! | AATCTTCCCACTTTGCTTTT+GGG | - | chr3_2:64748175-64748194 | None:intergenic | 35.0% |
! | AAATCTTCCCACTTTGCTTT+TGG | - | chr3_2:64748176-64748195 | None:intergenic | 35.0% |
AAAAGCAAAGTGGGAAGATT+TGG | + | chr3_2:64748175-64748194 | Msa0417530:intron | 35.0% | |
TCAATGGCAGCCATTAAAAT+TGG | + | chr3_2:64748471-64748490 | Msa0417530:intron | 35.0% | |
! | TGTTTGTTAAGACTTCAGAG+TGG | + | chr3_2:64748535-64748554 | Msa0417530:intron | 35.0% |
AAAATGGGGAGAAATATAGG+GGG | + | chr3_2:64748578-64748597 | Msa0417530:intron | 35.0% | |
AAACGAATAACAAGGGGTAA+GGG | - | chr3_2:64748870-64748889 | None:intergenic | 35.0% | |
TAAACGAATAACAAGGGGTA+AGG | - | chr3_2:64748871-64748890 | None:intergenic | 35.0% | |
TCACCTAAGAACTTCAAAGA+GGG | + | chr3_2:64748934-64748953 | Msa0417530:intron | 35.0% | |
GTTCTTGAAGTGACATCAAA+TGG | + | chr3_2:64749103-64749122 | Msa0417530:intron | 35.0% | |
!! | CTCATTAGCTTTGTTGTTCT+AGG | - | chr3_2:64749131-64749150 | None:intergenic | 35.0% |
CAATCAGCACAAAATATAGC+AGG | - | chr3_2:64749513-64749532 | None:intergenic | 35.0% | |
!! | CTGCTATATTTTGTGCTGAT+TGG | + | chr3_2:64749511-64749530 | Msa0417530:intron | 35.0% |
CAATCATGAAGGAAACGATT+CGG | + | chr3_2:64749737-64749756 | Msa0417530:intron | 35.0% | |
ACATTCAAAATGTCATGCAG+TGG | + | chr3_2:64749947-64749966 | Msa0417530:intron | 35.0% | |
TGTCAACTTGACATCATTAC+TGG | + | chr3_2:64750267-64750286 | Msa0417530:intron | 35.0% | |
TCCATTACCTATTACCATCA+GGG | - | chr3_2:64750392-64750411 | None:intergenic | 35.0% | |
TTCCATTACCTATTACCATC+AGG | - | chr3_2:64750393-64750412 | None:intergenic | 35.0% | |
!!! | TTTTCAAAGGACTAGTCAGA+AGG | + | chr3_2:64750661-64750680 | Msa0417530:CDS | 35.0% |
!!! | TATCACGTTTTTTCCTTGTC+TGG | + | chr3_2:64750864-64750883 | Msa0417530:three_prime_UTR | 35.0% |
CTCATATTCTGCTTAACCTC+GGG | + | chr3_2:64742684-64742703 | Msa0417530:CDS | 40.0% | |
CGTTGTGAATTGAAGAACAG+AGG | - | chr3_2:64742770-64742789 | Msa0417520:five_prime_UTR | 40.0% | |
GTTCTTCAATTCACAACGTC+AGG | + | chr3_2:64742772-64742791 | Msa0417530:CDS | 40.0% | |
! | GTGGTGAAAAGTAAGTTGAG+CGG | - | chr3_2:64743270-64743289 | None:intergenic | 40.0% |
! | GTTCCAAAGCACTAAGTATG+TGG | - | chr3_2:64743305-64743324 | None:intergenic | 40.0% |
TCAGAGAAGAAGAGGTCAAT+TGG | - | chr3_2:64743643-64743662 | None:intergenic | 40.0% | |
AGTGAGAATCAGAGAAGAAG+AGG | - | chr3_2:64743651-64743670 | None:intergenic | 40.0% | |
TTGAAGCTAGCTCACATGAA+CGG | + | chr3_2:64743674-64743693 | Msa0417530:intron | 40.0% | |
TACCTTAGGAATCGCAAAAG+AGG | - | chr3_2:64743772-64743791 | None:intergenic | 40.0% | |
ACCGAACTGAACCAAAGTTA+TGG | - | chr3_2:64744295-64744314 | None:intergenic | 40.0% | |
! | GAACTGAACCGTTTAAGGTT+TGG | - | chr3_2:64744323-64744342 | None:intergenic | 40.0% |
TAACCGAACTGAACCGTTTA+AGG | - | chr3_2:64744328-64744347 | None:intergenic | 40.0% | |
CAAATACAAATACCTAGGGG+TGG | - | chr3_2:64744414-64744433 | None:intergenic | 40.0% | |
CGACTATTATTTAGAGACGG+AGG | - | chr3_2:64744571-64744590 | None:intergenic | 40.0% | |
CCATGTGTGAAGTAAGTACT+CGG | - | chr3_2:64744793-64744812 | None:intergenic | 40.0% | |
AAAGCACGTACAAATAGAGG+AGG | + | chr3_2:64744838-64744857 | Msa0417530:intron | 40.0% | |
GTCAATAATACTGAGACGGA+GGG | + | chr3_2:64744960-64744979 | Msa0417530:intron | 40.0% | |
! | ATTGTGACACCTTTTCCACT+TGG | + | chr3_2:64745029-64745048 | Msa0417530:intron | 40.0% |
AAATACCAACAGAGTCCAAG+TGG | - | chr3_2:64745047-64745066 | None:intergenic | 40.0% | |
! | AAGATAGCGCTGAAAGTAAC+AGG | - | chr3_2:64745244-64745263 | None:intergenic | 40.0% |
! | AGTTGTGGATTGCAGTTTGT+TGG | + | chr3_2:64745431-64745450 | Msa0417530:CDS | 40.0% |
!! | TGCAGTTTGTTGGTTCTATG+TGG | + | chr3_2:64745441-64745460 | Msa0417530:CDS | 40.0% |
AATTTGGCAGGCTTCTCATA+TGG | + | chr3_2:64745634-64745653 | Msa0417530:CDS | 40.0% | |
TCATGTGTCGAAGTTAACTC+AGG | - | chr3_2:64745663-64745682 | None:intergenic | 40.0% | |
! | CTTGCACCTTTTTCTGTTCT+TGG | + | chr3_2:64745701-64745720 | Msa0417530:intron | 40.0% |
AACATACTGGGAATGACAAC+AGG | - | chr3_2:64745837-64745856 | None:intergenic | 40.0% | |
!! | TGTTGGTGATATCCAGAACA+AGG | + | chr3_2:64745927-64745946 | Msa0417530:CDS | 40.0% |
!! | GTTGGTGATATCCAGAACAA+GGG | + | chr3_2:64745928-64745947 | Msa0417530:CDS | 40.0% |
AACAAGGGAAGAGGTTTGAT+CGG | + | chr3_2:64745943-64745962 | Msa0417530:intron | 40.0% | |
GAAAACATCAGGCAACCTAA+TGG | - | chr3_2:64746079-64746098 | None:intergenic | 40.0% | |
TTTACTCTGCAAATGGAGGA+TGG | + | chr3_2:64746100-64746119 | Msa0417530:CDS | 40.0% | |
TCTCCCAGTGAATTTGGTTA+GGG | + | chr3_2:64746237-64746256 | Msa0417530:intron | 40.0% | |
CTTTCCCTAACCAAATTCAC+TGG | - | chr3_2:64746244-64746263 | None:intergenic | 40.0% | |
ACTTAAGGCTGTATGCTTTC+AGG | + | chr3_2:64746280-64746299 | Msa0417530:intron | 40.0% | |
!! | ATGGCAGCAACATTTTTGAG+AGG | + | chr3_2:64746530-64746549 | Msa0417530:intron | 40.0% |
!! | TGGCAGCAACATTTTTGAGA+GGG | + | chr3_2:64746531-64746550 | Msa0417530:intron | 40.0% |
CTGTGACAAATCATGGAAGT+TGG | - | chr3_2:64746664-64746683 | None:intergenic | 40.0% | |
ACATGGGATGGAAATGCAAT+TGG | - | chr3_2:64746908-64746927 | None:intergenic | 40.0% | |
ATATTGCACTAGTGCATCCT+GGG | - | chr3_2:64747270-64747289 | None:intergenic | 40.0% | |
TATATTGCACTAGTGCATCC+TGG | - | chr3_2:64747271-64747290 | None:intergenic | 40.0% | |
AGGATAATGAAGTTTACGCC+TGG | - | chr3_2:64747319-64747338 | None:intergenic | 40.0% | |
!! | GGCCTTTACTATTGACTTAG+AGG | + | chr3_2:64747400-64747419 | Msa0417530:intron | 40.0% |
CAATACTTTACCCAGTATGC+AGG | - | chr3_2:64747468-64747487 | None:intergenic | 40.0% | |
AACCCTAGTTGTTATGACTG+AGG | + | chr3_2:64747506-64747525 | Msa0417530:intron | 40.0% | |
CTCCTCAGTCATAACAACTA+GGG | - | chr3_2:64747511-64747530 | None:intergenic | 40.0% | |
AGGAGGATGCAAAAGTAGTT+AGG | + | chr3_2:64747526-64747545 | Msa0417530:intron | 40.0% | |
AGTTAAAGAGCGGAGTGATA+AGG | - | chr3_2:64747636-64747655 | None:intergenic | 40.0% | |
AATAAATGGGGGGAATGTAG+GGG | + | chr3_2:64747702-64747721 | Msa0417530:intron | 40.0% | |
!! | GTGAATTTGGTGATGGTGAA+AGG | + | chr3_2:64747741-64747760 | Msa0417530:intron | 40.0% |
CAATAAGATATCTGGCAGGT+TGG | - | chr3_2:64747906-64747925 | None:intergenic | 40.0% | |
CAACCTGCCAGATATCTTAT+TGG | + | chr3_2:64747904-64747923 | Msa0417530:intron | 40.0% | |
ACCTGCCAGATATCTTATTG+GGG | + | chr3_2:64747906-64747925 | Msa0417530:intron | 40.0% | |
TCTTCCCCCAATAAGATATC+TGG | - | chr3_2:64747914-64747933 | None:intergenic | 40.0% | |
! | AACTTCAGGGTGTTCTTGAA+AGG | + | chr3_2:64747941-64747960 | Msa0417530:intron | 40.0% |
! | ACTTCAGGGTGTTCTTGAAA+GGG | + | chr3_2:64747942-64747961 | Msa0417530:intron | 40.0% |
!! | TTGAAAGGGAGCACTGATAA+TGG | + | chr3_2:64747956-64747975 | Msa0417530:intron | 40.0% |
!! | TGAAAGGGAGCACTGATAAT+GGG | + | chr3_2:64747957-64747976 | Msa0417530:intron | 40.0% |
TGGCTGATAATTCAGTACCA+CGG | + | chr3_2:64748045-64748064 | Msa0417530:intron | 40.0% | |
AATTCAGTACCACGGTAATG+AGG | + | chr3_2:64748053-64748072 | Msa0417530:intron | 40.0% | |
ATTCAGTACCACGGTAATGA+GGG | + | chr3_2:64748054-64748073 | Msa0417530:intron | 40.0% | |
TTAAAGAGACAGCAAGAGCT+AGG | + | chr3_2:64748124-64748143 | Msa0417530:intron | 40.0% | |
TAAAGAGACAGCAAGAGCTA+GGG | + | chr3_2:64748125-64748144 | Msa0417530:intron | 40.0% | |
AAGTGGGAAGATTTGGCATT+TGG | + | chr3_2:64748182-64748201 | Msa0417530:intron | 40.0% | |
TCTGAAGACAGACAGTTAGA+TGG | + | chr3_2:64748268-64748287 | Msa0417530:intron | 40.0% | |
CTGAAGACAGACAGTTAGAT+GGG | + | chr3_2:64748269-64748288 | Msa0417530:intron | 40.0% | |
GAAACAGCCAAGCTTATGTT+TGG | + | chr3_2:64748291-64748310 | Msa0417530:intron | 40.0% | |
ATGGGCCAAGTCCAAATTTA+TGG | + | chr3_2:64748319-64748338 | Msa0417530:intron | 40.0% | |
TGTTAAGACTTCAGAGTGGT+TGG | + | chr3_2:64748539-64748558 | Msa0417530:intron | 40.0% | |
TCTGTCTTGAATACGAACCA+AGG | - | chr3_2:64748794-64748813 | None:intergenic | 40.0% | |
GTCACCTAAGAACTTCAAAG+AGG | + | chr3_2:64748933-64748952 | Msa0417530:intron | 40.0% | |
!! | TCTCCCTCTTTGAAGTTCTT+AGG | - | chr3_2:64748940-64748959 | None:intergenic | 40.0% |
GTTAATTTCCGATATAGGGG+TGG | + | chr3_2:64749352-64749371 | Msa0417530:intron | 40.0% | |
!! | TTTGTGCTGATTGGTTGTCA+AGG | + | chr3_2:64749520-64749539 | Msa0417530:intron | 40.0% |
CTTAAACGTCGGATACAGTA+AGG | - | chr3_2:64749563-64749582 | None:intergenic | 40.0% | |
ATTACAAGACATGGTTGCAC+AGG | + | chr3_2:64749642-64749661 | Msa0417530:CDS | 40.0% | |
ATGCGGTAACAATTCAGGTA+TGG | + | chr3_2:64750017-64750036 | Msa0417530:intron | 40.0% | |
ATTACCTATTACCATCAGGG+TGG | - | chr3_2:64750389-64750408 | None:intergenic | 40.0% | |
ACCCTGATGGTAATAGGTAA+TGG | + | chr3_2:64750388-64750407 | Msa0417530:intron | 40.0% | |
! | TCATTTGTAAAGGAGTGTGG+TGG | + | chr3_2:64750978-64750997 | Msa0417530:three_prime_UTR | 40.0% |
! | GAAACGAACGACTAGCTAAG+TGG | - | chr3_2:64742937-64742956 | None:intergenic | 45.0% |
!! | TATGTGGTTTGGTTATGCGG+TGG | - | chr3_2:64743289-64743308 | None:intergenic | 45.0% |
! | TGATGGGGTATTTGTAGGAG+TGG | + | chr3_2:64743383-64743402 | Msa0417530:intron | 45.0% |
! | GATGGGGTATTTGTAGGAGT+GGG | + | chr3_2:64743384-64743403 | Msa0417530:intron | 45.0% |
TGCGATTCTCACTCTTCTTC+TGG | + | chr3_2:64743722-64743741 | Msa0417530:intron | 45.0% | |
! | CACCTCTTTTGCGATTCCTA+AGG | + | chr3_2:64743767-64743786 | Msa0417530:intron | 45.0% |
! | GGTTAGCCGAACCATAACTT+TGG | + | chr3_2:64744281-64744300 | Msa0417530:intron | 45.0% |
TCCGAACCATTTCGACACTT+CGG | + | chr3_2:64744349-64744368 | Msa0417530:intron | 45.0% | |
!! | ACCGAAGTGTCGAAATGGTT+CGG | - | chr3_2:64744353-64744372 | None:intergenic | 45.0% |
!! | ACAGAACCGAAGTGTCGAAA+TGG | - | chr3_2:64744358-64744377 | None:intergenic | 45.0% |
TTCGACACTTCGGTTCTGTT+CGG | + | chr3_2:64744359-64744378 | Msa0417530:intron | 45.0% | |
CGGTCGGATATTCTATCCAA+TGG | - | chr3_2:64744468-64744487 | None:intergenic | 45.0% | |
TGGATAGAATATCCGACCGA+TGG | + | chr3_2:64744469-64744488 | Msa0417530:intron | 45.0% | |
GAAAGACACAATCCATCGGT+CGG | - | chr3_2:64744484-64744503 | None:intergenic | 45.0% | |
CCGAGTACTTACTTCACACA+TGG | + | chr3_2:64744790-64744809 | Msa0417530:intron | 45.0% | |
! | AGGAGGAGTAAAAGGCATGA+AGG | + | chr3_2:64744855-64744874 | Msa0417530:intron | 45.0% |
! | GGAGGAGTAAAAGGCATGAA+GGG | + | chr3_2:64744856-64744875 | Msa0417530:intron | 45.0% |
CGTCAATAATACTGAGACGG+AGG | + | chr3_2:64744959-64744978 | Msa0417530:intron | 45.0% | |
CAACAGAGTCCAAGTGGAAA+AGG | - | chr3_2:64745041-64745060 | None:intergenic | 45.0% | |
! | CTTTTCCACTTGGACTCTGT+TGG | + | chr3_2:64745039-64745058 | Msa0417530:intron | 45.0% |
GTTAGACAATACACACGGGA+AGG | + | chr3_2:64745100-64745119 | Msa0417530:CDS | 45.0% | |
AATACACACGGGAAGGTTGA+TGG | + | chr3_2:64745107-64745126 | Msa0417530:CDS | 45.0% | |
! | CGTTGTTATTAGCCACCACA+AGG | + | chr3_2:64745157-64745176 | Msa0417530:CDS | 45.0% |
TGTTATTAGCCACCACAAGG+AGG | + | chr3_2:64745160-64745179 | Msa0417530:CDS | 45.0% | |
GTTATTAGCCACCACAAGGA+GGG | + | chr3_2:64745161-64745180 | Msa0417530:CDS | 45.0% | |
GTAGTTGTAAACCCTCCTTG+TGG | - | chr3_2:64745175-64745194 | None:intergenic | 45.0% | |
TATACACTCATGGCATCCTC+AGG | + | chr3_2:64745207-64745226 | Msa0417530:CDS | 45.0% | |
ACAGGTTACGATCTAACCTG+AGG | - | chr3_2:64745226-64745245 | None:intergenic | 45.0% | |
!! | AGGGAGCTTGAGAGTGTTAT+TGG | - | chr3_2:64745508-64745527 | None:intergenic | 45.0% |
GAGAAGCCTGCCAAATTGAT+TGG | - | chr3_2:64745631-64745650 | None:intergenic | 45.0% | |
! | CAGCAACTTTTGTGAGCTTC+CGG | + | chr3_2:64745891-64745910 | Msa0417530:intron | 45.0% |
! | AACTTTTGTGAGCTTCCGGT+TGG | + | chr3_2:64745895-64745914 | Msa0417530:CDS | 45.0% |
CCAACACATACTGTACCAAC+CGG | - | chr3_2:64745913-64745932 | None:intergenic | 45.0% | |
GATATCCAGAACAAGGGAAG+AGG | + | chr3_2:64745934-64745953 | Msa0417530:CDS | 45.0% | |
TCAAACCTCTTCCCTTGTTC+TGG | - | chr3_2:64745942-64745961 | None:intergenic | 45.0% | |
ATGCATTCTTTGACCGACCT+GGG | - | chr3_2:64746048-64746067 | None:intergenic | 45.0% | |
AGGTCGGTCAAAGAATGCAT+GGG | + | chr3_2:64746048-64746067 | Msa0417530:intron | 45.0% | |
AATGCATGGGAGTCTCCATT+AGG | + | chr3_2:64746061-64746080 | Msa0417530:CDS | 45.0% | |
TGTTTCCTTGGCTATCACAG+AGG | + | chr3_2:64746150-64746169 | Msa0417530:CDS | 45.0% | |
TCCTAGTCTCCCAGTGAATT+TGG | + | chr3_2:64746231-64746250 | Msa0417530:intron | 45.0% | |
ACCAAATTCACTGGGAGACT+AGG | - | chr3_2:64746235-64746254 | None:intergenic | 45.0% | |
GTCTCCCAGTGAATTTGGTT+AGG | + | chr3_2:64746236-64746255 | Msa0417530:intron | 45.0% | |
AGGGATTTATAATAGGGCCC+AGG | + | chr3_2:64747250-64747269 | Msa0417530:intron | 45.0% | |
ACTTGGCATAGGGGAAATAG+AGG | - | chr3_2:64747339-64747358 | None:intergenic | 45.0% | |
GACTTAGAGGGTGAGACATA+TGG | + | chr3_2:64747413-64747432 | Msa0417530:intron | 45.0% | |
CCTCCTCAGTCATAACAACT+AGG | - | chr3_2:64747512-64747531 | None:intergenic | 45.0% | |
CCTAGTTGTTATGACTGAGG+AGG | + | chr3_2:64747509-64747528 | Msa0417530:intron | 45.0% | |
CCAACCAATCCCTATAAGGT+TGG | - | chr3_2:64747679-64747698 | None:intergenic | 45.0% | |
! | CCAACCTTATAGGGATTGGT+TGG | + | chr3_2:64747676-64747695 | Msa0417530:intron | 45.0% |
ATAAATGGGGGGAATGTAGG+GGG | + | chr3_2:64747703-64747722 | Msa0417530:intron | 45.0% | |
CCTGCCAGATATCTTATTGG+GGG | + | chr3_2:64747907-64747926 | Msa0417530:intron | 45.0% | |
GGAAGAAAGGGAGAACTTCA+GGG | + | chr3_2:64747928-64747947 | Msa0417530:intron | 45.0% | |
CAACTTGCAACCTCTGTTGA+GGG | + | chr3_2:64747983-64748002 | Msa0417530:intron | 45.0% | |
TTCAGTACCACGGTAATGAG+GGG | + | chr3_2:64748055-64748074 | Msa0417530:intron | 45.0% | |
TAGGGATGAAGTGGAAAGAC+TGG | + | chr3_2:64748143-64748162 | Msa0417530:intron | 45.0% | |
AGGGATGAAGTGGAAAGACT+GGG | + | chr3_2:64748144-64748163 | Msa0417530:intron | 45.0% | |
! | GACTAGCCCAAAAGCAAAGT+GGG | + | chr3_2:64748166-64748185 | Msa0417530:intron | 45.0% |
!! | CATAATGGGCCAGACACAAA+CGG | + | chr3_2:64748230-64748249 | Msa0417530:intron | 45.0% |
!! | ATAATGGGCCAGACACAAAC+GGG | + | chr3_2:64748231-64748250 | Msa0417530:intron | 45.0% |
GGGGGAGAAGAATCATTAAG+TGG | + | chr3_2:64748596-64748615 | Msa0417530:intron | 45.0% | |
GGGCTCTTAACAATGTTCGT+AGG | + | chr3_2:64748739-64748758 | Msa0417530:intron | 45.0% | |
AGAACTTCAAAGAGGGAGAG+AGG | + | chr3_2:64748941-64748960 | Msa0417530:intron | 45.0% | |
GAACTTCAAAGAGGGAGAGA+GGG | + | chr3_2:64748942-64748961 | Msa0417530:intron | 45.0% | |
AACTTCAAAGAGGGAGAGAG+GGG | + | chr3_2:64748943-64748962 | Msa0417530:intron | 45.0% | |
TGCAGGATTTCAAACCCTAG+AGG | + | chr3_2:64749613-64749632 | Msa0417530:intron | 45.0% | |
GGACAAAGTAGTCGAACATG+CGG | + | chr3_2:64750000-64750019 | Msa0417530:CDS | 45.0% | |
CGAACATGCGGTAACAATTC+AGG | + | chr3_2:64750012-64750031 | Msa0417530:CDS | 45.0% | |
TTTGTAGGGTTTGACGTCCT+CGG | + | chr3_2:64750320-64750339 | Msa0417530:intron | 45.0% | |
! | TCGGGATATTTGTTGGCAGT+CGG | + | chr3_2:64750339-64750358 | Msa0417530:CDS | 45.0% |
TACACAGCTCATGTCACAAG+AGG | + | chr3_2:64750703-64750722 | Msa0417530:three_prime_UTR | 45.0% | |
!!! | CGTTTTTTCCTTGTCTGGTC+AGG | + | chr3_2:64750869-64750888 | Msa0417530:three_prime_UTR | 45.0% |
ATATGTTGCCTGACCAGACA+AGG | - | chr3_2:64750880-64750899 | None:intergenic | 45.0% | |
TGTCTGCAGACCAACGTTTG+CGG | - | chr3_2:64743328-64743347 | None:intergenic | 50.0% | |
!!! | GGTTTTGGTTCGGTTCGGTT+CGG | + | chr3_2:64744241-64744260 | Msa0417530:intron | 50.0% |
! | AAAGGCATGAAGGGCAGAGT+TGG | + | chr3_2:64744865-64744884 | Msa0417530:intron | 50.0% |
GTTGTAAACCCTCCTTGTGG+TGG | - | chr3_2:64745172-64745191 | None:intergenic | 50.0% | |
! | CCGGTTGGTACAGTATGTGT+TGG | + | chr3_2:64745910-64745929 | Msa0417530:CDS | 50.0% |
! | CTCTGAGAGCTTAAACTCCC+AGG | + | chr3_2:64746028-64746047 | Msa0417530:intron | 50.0% |
GAGAGCTTAAACTCCCAGGT+CGG | + | chr3_2:64746032-64746051 | Msa0417530:intron | 50.0% | |
CATGCATTCTTTGACCGACC+TGG | - | chr3_2:64746049-64746068 | None:intergenic | 50.0% | |
CAGGTCGGTCAAAGAATGCA+TGG | + | chr3_2:64746047-64746066 | Msa0417530:intron | 50.0% | |
CTCTGCAAATGGAGGATGGA+CGG | + | chr3_2:64746104-64746123 | Msa0417530:CDS | 50.0% | |
TCTGCAAATGGAGGATGGAC+GGG | + | chr3_2:64746105-64746124 | Msa0417530:CDS | 50.0% | |
GATTGCCTCTGTGATAGCCA+AGG | - | chr3_2:64746158-64746177 | None:intergenic | 50.0% | |
GGCTATCACAGAGGCAATCA+AGG | + | chr3_2:64746159-64746178 | Msa0417530:CDS | 50.0% | |
! | ACCTTTTGGTCGCACAGACA+AGG | + | chr3_2:64747441-64747460 | Msa0417530:intron | 50.0% |
TCCTTGTCTGTGCGACCAAA+AGG | - | chr3_2:64747445-64747464 | None:intergenic | 50.0% | |
ACAGACAAGGACCTGCATAC+TGG | + | chr3_2:64747454-64747473 | Msa0417530:intron | 50.0% | |
CAGACAAGGACCTGCATACT+GGG | + | chr3_2:64747455-64747474 | Msa0417530:intron | 50.0% | |
AGAGCGGAGTGATAAGGAGA+GGG | - | chr3_2:64747630-64747649 | None:intergenic | 50.0% | |
AAGAGCGGAGTGATAAGGAG+AGG | - | chr3_2:64747631-64747650 | None:intergenic | 50.0% | |
GGAGTGGGAGAGTTAAAGAG+CGG | - | chr3_2:64747646-64747665 | None:intergenic | 50.0% | |
CCAATCCCTATAAGGTTGGC+TGG | - | chr3_2:64747675-64747694 | None:intergenic | 50.0% | |
CCAGCCAACCTTATAGGGAT+TGG | + | chr3_2:64747672-64747691 | Msa0417530:intron | 50.0% | |
TAAATGGGGGGAATGTAGGG+GGG | + | chr3_2:64747704-64747723 | Msa0417530:intron | 50.0% | |
! | GGCAGGTTGGACCAATTGTT+GGG | - | chr3_2:64747893-64747912 | None:intergenic | 50.0% |
! | TGGCAGGTTGGACCAATTGT+TGG | - | chr3_2:64747894-64747913 | None:intergenic | 50.0% |
CCCCCAATAAGATATCTGGC+AGG | - | chr3_2:64747910-64747929 | None:intergenic | 50.0% | |
GGGAAGAAAGGGAGAACTTC+AGG | + | chr3_2:64747927-64747946 | Msa0417530:intron | 50.0% | |
GCAACTTGCAACCTCTGTTG+AGG | + | chr3_2:64747982-64748001 | Msa0417530:intron | 50.0% | |
CTCTGTTGAGGGAGCTGAAA+GGG | + | chr3_2:64747994-64748013 | Msa0417530:intron | 50.0% | |
TCTGTTGAGGGAGCTGAAAG+GGG | + | chr3_2:64747995-64748014 | Msa0417530:intron | 50.0% | |
TAACAACCGCAGTGCTCGTA+TGG | + | chr3_2:64748022-64748041 | Msa0417530:intron | 50.0% | |
CATCTTACCCCTCATTACCG+TGG | - | chr3_2:64748065-64748084 | None:intergenic | 50.0% | |
AGCAAGAGCTAGGGATGAAG+TGG | + | chr3_2:64748134-64748153 | Msa0417530:intron | 50.0% | |
!! | GGACTAGCCCAAAAGCAAAG+TGG | + | chr3_2:64748165-64748184 | Msa0417530:intron | 50.0% |
ATGACAGACCCGTTTGTGTC+TGG | - | chr3_2:64748242-64748261 | None:intergenic | 50.0% | |
GACACAAACGGGTCTGTCAT+TGG | + | chr3_2:64748242-64748261 | Msa0417530:intron | 50.0% | |
TGACTGAGAATAGGAGAGCG+AGG | - | chr3_2:64748668-64748687 | None:intergenic | 50.0% | |
TGCACAGGCTTTCTGTACCT+TGG | + | chr3_2:64748774-64748793 | Msa0417530:intron | 50.0% | |
CACATTGGCCACCCCTATAT+CGG | - | chr3_2:64749363-64749382 | None:intergenic | 50.0% | |
TTGTAGGGTTTGACGTCCTC+GGG | + | chr3_2:64750321-64750340 | Msa0417530:intron | 50.0% | |
GACGTCCTCGGGATATTTGT+TGG | + | chr3_2:64750332-64750351 | Msa0417530:CDS | 50.0% | |
GACTGCCAACAAATATCCCG+AGG | - | chr3_2:64750340-64750359 | None:intergenic | 50.0% | |
AGCTCCACCCTGATGGTAAT+AGG | + | chr3_2:64750382-64750401 | Msa0417530:CDS | 50.0% | |
!! | GCTTTGGAACCCGCAAACGT+TGG | + | chr3_2:64743315-64743334 | Msa0417530:intron | 55.0% |
GTCTGCAGACCAACGTTTGC+GGG | - | chr3_2:64743327-64743346 | None:intergenic | 55.0% | |
! | GCAAACGTTGGTCTGCAGAC+AGG | + | chr3_2:64743327-64743346 | Msa0417530:intron | 55.0% |
TCTGCAGACAGGACAGGACA+GGG | + | chr3_2:64743338-64743357 | Msa0417530:intron | 55.0% | |
CACTTCGGTTCTGTTCGGTC+TGG | + | chr3_2:64744364-64744383 | Msa0417530:intron | 55.0% | |
CAAATACCTAGGGGTGGGCA+TGG | - | chr3_2:64744408-64744427 | None:intergenic | 55.0% | |
CATCAATGCACGGCAATCCC+TGG | - | chr3_2:64746741-64746760 | None:intergenic | 55.0% | |
AAATGGGGGGAATGTAGGGG+GGG | + | chr3_2:64747705-64747724 | Msa0417530:intron | 55.0% | |
CCTTTCAGCTCCCTCAACAG+AGG | - | chr3_2:64747996-64748015 | None:intergenic | 55.0% | |
CCTCTGTTGAGGGAGCTGAA+AGG | + | chr3_2:64747993-64748012 | Msa0417530:intron | 55.0% | |
! | AGGAGCATAGTGCACTGCAC+AGG | + | chr3_2:64748759-64748778 | Msa0417530:intron | 55.0% |
CAGGGTGGAGCTCACACATT+TGG | - | chr3_2:64750374-64750393 | None:intergenic | 55.0% | |
ATGTGTGAGCTCCACCCTGA+TGG | + | chr3_2:64750375-64750394 | Msa0417530:CDS | 55.0% | |
! | CGTTGGTCTGCAGACAGGAC+AGG | + | chr3_2:64743332-64743351 | Msa0417530:intron | 60.0% |
GTCTGCAGACAGGACAGGAC+AGG | + | chr3_2:64743337-64743356 | Msa0417530:intron | 60.0% | |
ACCTAGGGGTGGGCATGGTT+CGG | - | chr3_2:64744403-64744422 | None:intergenic | 60.0% | |
AATGGGGGGAATGTAGGGGG+GGG | + | chr3_2:64747706-64747725 | Msa0417530:intron | 60.0% | |
CAACCGCAGTGCTCGTATGG+TGG | + | chr3_2:64748025-64748044 | Msa0417530:intron | 60.0% | |
! | CAGCCACCATACGAGCACTG+CGG | - | chr3_2:64748031-64748050 | None:intergenic | 60.0% |
ACCGAACCATGCCCACCCCT+AGG | + | chr3_2:64744399-64744418 | Msa0417530:intron | 65.0% | |
TGTTGGGGGCGGATGACCCG+AGG | - | chr3_2:64742703-64742722 | Msa0417520:five_prime_UTR | 70.0% | |
GGGGGAATGTAGGGGGGGGA+AGG | + | chr3_2:64747710-64747729 | Msa0417530:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 64742672 | 64751012 | 64742672 | ID=Msa0417530;Name=Msa0417530 |
chr3_2 | mRNA | 64742672 | 64751012 | 64742672 | ID=Msa0417530-mRNA-1;Parent=Msa0417530;Name=Msa0417530-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.9|0.72|1|0.8|0.81|11|317|425 |
chr3_2 | exon | 64742672 | 64742793 | 64742672 | ID=Msa0417530-mRNA-1:exon:14404;Parent=Msa0417530-mRNA-1 |
chr3_2 | exon | 64745100 | 64745228 | 64745100 | ID=Msa0417530-mRNA-1:exon:14405;Parent=Msa0417530-mRNA-1 |
chr3_2 | exon | 64745389 | 64745694 | 64745389 | ID=Msa0417530-mRNA-1:exon:14406;Parent=Msa0417530-mRNA-1 |
chr3_2 | exon | 64745894 | 64745955 | 64745894 | ID=Msa0417530-mRNA-1:exon:14407;Parent=Msa0417530-mRNA-1 |
chr3_2 | exon | 64746050 | 64746198 | 64746050 | ID=Msa0417530-mRNA-1:exon:14408;Parent=Msa0417530-mRNA-1 |
chr3_2 | exon | 64746742 | 64746862 | 64746742 | ID=Msa0417530-mRNA-1:exon:14409;Parent=Msa0417530-mRNA-1 |
chr3_2 | exon | 64747035 | 64747190 | 64747035 | ID=Msa0417530-mRNA-1:exon:14410;Parent=Msa0417530-mRNA-1 |
chr3_2 | exon | 64749618 | 64749663 | 64749618 | ID=Msa0417530-mRNA-1:exon:14411;Parent=Msa0417530-mRNA-1 |
chr3_2 | exon | 64749967 | 64750033 | 64749967 | ID=Msa0417530-mRNA-1:exon:14412;Parent=Msa0417530-mRNA-1 |
chr3_2 | exon | 64750327 | 64750403 | 64750327 | ID=Msa0417530-mRNA-1:exon:14413;Parent=Msa0417530-mRNA-1 |
chr3_2 | exon | 64750653 | 64751012 | 64750653 | ID=Msa0417530-mRNA-1:exon:14414;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64742672 | 64742793 | 64742672 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64745100 | 64745228 | 64745100 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64745389 | 64745694 | 64745389 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64745894 | 64745955 | 64745894 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64746050 | 64746198 | 64746050 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64746742 | 64746862 | 64746742 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64747035 | 64747190 | 64747035 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64749618 | 64749663 | 64749618 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64749967 | 64750033 | 64749967 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64750327 | 64750403 | 64750327 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | CDS | 64750653 | 64750695 | 64750653 | ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1 |
chr3_2 | three_prime_UTR | 64750696 | 64751012 | 64750696 | ID=Msa0417530-mRNA-1:three_prime_utr;Parent=Msa0417530-mRNA-1 |
Gene Sequence |
Protein sequence |