AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0417530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0417530 MtrunA17_Chr3g0115071 98.171 328 6 0 98 425 34 361 0.0 672
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0417530 AT2G25710.5 71.037 328 93 2 98 424 3 329 2.17e-172 486
Msa0417530 AT2G25710.4 71.037 328 93 2 98 424 3 329 2.17e-172 486
Msa0417530 AT2G25710.1 71.037 328 93 2 98 424 41 367 2.46e-172 487
Msa0417530 AT2G25710.2 71.037 328 93 2 98 424 41 367 2.46e-172 487
Msa0417530 AT1G37150.2 70.679 324 93 2 102 424 7 329 1.10e-169 479
Msa0417530 AT1G37150.4 68.662 284 78 1 152 424 3 286 7.50e-145 414
Msa0417530 AT1G37150.9 66.894 293 95 2 102 393 7 298 9.24e-143 411
Msa0417530 AT1G37150.3 67.708 288 91 2 102 388 7 293 5.90e-142 407
Msa0417530 AT1G37150.8 67.708 288 91 2 102 388 7 293 5.90e-142 407
Msa0417530 AT1G37150.7 67.708 288 91 2 102 388 7 293 5.90e-142 407
Msa0417530 AT1G37150.5 67.832 286 90 2 102 386 7 291 1.02e-141 406
Msa0417530 AT1G37150.6 67.832 286 90 2 102 386 7 291 1.02e-141 406
Msa0417530 AT2G25710.3 67.910 268 82 3 98 363 41 306 2.02e-132 383
Msa0417530 AT2G25710.8 67.910 268 82 3 98 363 41 306 2.02e-132 383
Msa0417530 AT2G25710.7 67.589 253 80 2 98 349 41 292 1.25e-121 355
Msa0417530 AT2G25710.6 67.589 253 80 2 98 349 41 292 1.25e-121 355
Msa0417530 AT1G37150.1 71.287 202 58 0 187 388 9 210 3.97e-108 318

Find 94 sgRNAs with CRISPR-Local

Find 551 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTTAGAACTGTATTTA+AGG 0.111945 3_2:-64747074 None:intergenic
GAACATCTTCTCTTTGAAAT+TGG 0.211376 3_2:-64747114 None:intergenic
TCTCTTTCTACCAATCAATT+TGG 0.239071 3_2:+64745618 Msa0417530:CDS
AATTCATGAATGAACTAAAT+TGG 0.279539 3_2:-64745596 None:intergenic
AGGGAGCTTGAGAGTGTTAT+TGG 0.294498 3_2:-64745505 None:intergenic
TCAAACCTCTTCCCTTGTTC+TGG 0.304902 3_2:-64745939 None:intergenic
CGAACATGCGGTAACAATTC+AGG 0.306394 3_2:+64750012 Msa0417530:CDS
CCGTTTAAGTACAGATCATT+TGG 0.323737 3_2:-64746775 None:intergenic
GGTTAAGCAGAATATGAGTT+TGG 0.325261 3_2:-64742679 Msa0417520:five_prime_UTR
AGTTCAGTATGTTGTTTCCT+TGG 0.354644 3_2:+64746138 Msa0417530:CDS
GAACTCTGAATGTAAAATAA+TGG 0.359620 3_2:-64745544 None:intergenic
ATACTGAAAATTTATATGTT+GGG 0.361187 3_2:-64742716 Msa0417520:five_prime_UTR
ATGGATAGTTCTTTCTTGTC+AGG 0.365223 3_2:-64745525 None:intergenic
CAGGGTGGAGCTCACACATT+TGG 0.389032 3_2:-64750371 None:intergenic
AATACTGAAAATTTATATGT+TGG 0.391610 3_2:-64742717 Msa0417520:five_prime_UTR
ACTGTATTTAAGGATGTTGT+TGG 0.393939 3_2:-64747064 None:intergenic
ATTTCAAAGAGAAGATGTTC+TGG 0.407060 3_2:+64747117 Msa0417530:CDS
TTCCATTACCTATTACCATC+AGG 0.410856 3_2:-64750390 None:intergenic
CCAAATGATCTGTACTTAAA+CGG 0.410986 3_2:+64746775 Msa0417530:CDS
AGTTGTGGATTGCAGTTTGT+TGG 0.414787 3_2:+64745431 Msa0417530:CDS
AGCTCCACCCTGATGGTAAT+AGG 0.416462 3_2:+64750382 Msa0417530:CDS
AATTTGGCAGGCTTCTCATA+TGG 0.421581 3_2:+64745634 Msa0417530:CDS
TACTTAAACGGATTTAAAGT+TGG 0.432774 3_2:+64746787 Msa0417530:CDS
TTGTAGGGTTTGACGTCCTC+GGG 0.435328 3_2:+64750321 Msa0417530:intron
TTTGTAGGGTTTGACGTCCT+CGG 0.435494 3_2:+64750320 Msa0417530:intron
GACGTCCTCGGGATATTTGT+TGG 0.437033 3_2:+64750332 Msa0417530:CDS
GTTAAGCAGAATATGAGTTT+GGG 0.438922 3_2:-64742678 Msa0417520:five_prime_UTR
GAAAACATCAGGCAACCTAA+TGG 0.441676 3_2:-64746076 None:intergenic
GTTCTTCAATTCACAACGTC+AGG 0.457095 3_2:+64742772 Msa0417530:CDS
GGCTATCACAGAGGCAATCA+AGG 0.464240 3_2:+64746159 Msa0417530:CDS
TCTTGTAATATAGTTCCTCT+AGG 0.468024 3_2:-64749628 None:intergenic
TACTGAAAATTTATATGTTG+GGG 0.468405 3_2:-64742715 Msa0417520:five_prime_UTR
GCAGAGTAAAAGAAAACATC+AGG 0.469791 3_2:-64746087 None:intergenic
GAGAAGCCTGCCAAATTGAT+TGG 0.473011 3_2:-64745628 None:intergenic
AATACACACGGGAAGGTTGA+TGG 0.473374 3_2:+64745107 Msa0417530:CDS
AATGCATGGGAGTCTCCATT+AGG 0.474078 3_2:+64746061 Msa0417530:CDS
TTTCTACCAATCAATTTGGC+AGG 0.476100 3_2:+64745622 Msa0417530:CDS
TTGAAGAAAATCGCAGAGAA+AGG 0.485044 3_2:-64742741 Msa0417520:five_prime_UTR
GAAACAACATACTGAACTAA+AGG 0.493234 3_2:-64746133 None:intergenic
CATGAATGAACTAAATTGGA+AGG 0.495238 3_2:-64745592 None:intergenic
CTTGTAATATAGTTCCTCTA+GGG 0.500499 3_2:-64749627 None:intergenic
CTTCTTTGATTTATATGTAG+AGG 0.504393 3_2:-64746824 None:intergenic
GTTTAGTTAATCATTTGTAA+AGG 0.505712 3_2:+64750968 Msa0417530:three_prime_UTR
TTTACTCTGCAAATGGAGGA+TGG 0.511964 3_2:+64746100 Msa0417530:CDS
CTCATATTCTGCTTAACCTC+GGG 0.513380 3_2:+64742684 Msa0417530:CDS
CTCTGCAAATGGAGGATGGA+CGG 0.514061 3_2:+64746104 Msa0417530:CDS
TAACTAAACAATCATGAGCT+TGG 0.522783 3_2:-64750954 None:intergenic
TGGATAGTTCTTTCTTGTCA+GGG 0.530693 3_2:-64745524 None:intergenic
CCAACACATACTGTACCAAC+CGG 0.533546 3_2:-64745910 None:intergenic
TGAAGAAAATCGCAGAGAAA+GGG 0.536043 3_2:-64742740 Msa0417520:five_prime_UTR
TTAAACGGATTTAAAGTTGG+AGG 0.536654 3_2:+64746790 Msa0417530:CDS
AAGAAGTTCAATATCAGTGC+AGG 0.537210 3_2:+64746841 Msa0417530:CDS
TCCATTACCTATTACCATCA+GGG 0.541073 3_2:-64750389 None:intergenic
TGCAGTTTGTTGGTTCTATG+TGG 0.543232 3_2:+64745441 Msa0417530:CDS
TCTGCAAATGGAGGATGGAC+GGG 0.547695 3_2:+64746105 Msa0417530:CDS
TCGGGATATTTGTTGGCAGT+CGG 0.549135 3_2:+64750339 Msa0417530:CDS
CAGGTCGGTCAAAGAATGCA+TGG 0.550156 3_2:+64746047 Msa0417530:intron
ATTACAAGACATGGTTGCAC+AGG 0.556223 3_2:+64749642 Msa0417530:CDS
TATACACTCATGGCATCCTC+AGG 0.556833 3_2:+64745207 Msa0417530:CDS
TAATCATTTGTAAAGGAGTG+TGG 0.565262 3_2:+64750975 Msa0417530:three_prime_UTR
GTTGTAAACCCTCCTTGTGG+TGG 0.586071 3_2:-64745169 None:intergenic
TCTTTCAACATATACACTCA+TGG 0.588980 3_2:+64745197 Msa0417530:CDS
GTTCTAAGAGAATTGTCTGT+GGG 0.590225 3_2:+64747085 Msa0417530:CDS
CGTTGTTATTAGCCACCACA+AGG 0.591906 3_2:+64745157 Msa0417530:CDS
TGAGTGTATATGTTGAAAGA+TGG 0.594866 3_2:-64745194 None:intergenic
GATATCCAGAACAAGGGAAG+AGG 0.594894 3_2:+64745934 Msa0417530:CDS
TGTTGGTGATATCCAGAACA+AGG 0.598168 3_2:+64745927 Msa0417530:CDS
GCATTGATGTTAAAATCAAG+TGG 0.601093 3_2:+64746752 Msa0417530:CDS
GTTATTAGCCACCACAAGGA+GGG 0.602791 3_2:+64745161 Msa0417530:CDS
ATATGTTGCCTGACCAGACA+AGG 0.602815 3_2:-64750877 None:intergenic
ACTCATATTCTGCTTAACCT+CGG 0.607813 3_2:+64742683 Msa0417530:CDS
TACACAGCTCATGTCACAAG+AGG 0.612533 3_2:+64750703 Msa0417530:three_prime_UTR
CCGGTTGGTACAGTATGTGT+TGG 0.612660 3_2:+64745910 Msa0417530:CDS
ACTGAAAATTTATATGTTGG+GGG 0.624966 3_2:-64742714 Msa0417520:five_prime_UTR
AGGTCGGTCAAAGAATGCAT+GGG 0.628269 3_2:+64746048 Msa0417530:intron
TCATGTGTCGAAGTTAACTC+AGG 0.633045 3_2:-64745660 None:intergenic
ATGTGTGAGCTCCACCCTGA+TGG 0.635556 3_2:+64750375 Msa0417530:CDS
GATTGCCTCTGTGATAGCCA+AGG 0.635755 3_2:-64746155 None:intergenic
AGGAACTATATTACAAGACA+TGG 0.642353 3_2:+64749633 Msa0417530:CDS
GTTAGACAATACACACGGGA+AGG 0.656409 3_2:+64745100 Msa0417530:CDS
TCATTTGTAAAGGAGTGTGG+TGG 0.661393 3_2:+64750978 Msa0417530:three_prime_UTR
TGTTATTAGCCACCACAAGG+AGG 0.667643 3_2:+64745160 Msa0417530:CDS
AGTTCTAAGAGAATTGTCTG+TGG 0.675294 3_2:+64747084 Msa0417530:CDS
TGCAGGATTTCAAACCCTAG+AGG 0.679588 3_2:+64749613 Msa0417530:intron
CGTTGTGAATTGAAGAACAG+AGG 0.679980 3_2:-64742767 Msa0417520:five_prime_UTR
TATAGGTTAGACAATACACA+CGG 0.684699 3_2:+64745095 Msa0417530:intron
ATTACCTATTACCATCAGGG+TGG 0.691674 3_2:-64750386 None:intergenic
GACTGCCAACAAATATCCCG+AGG 0.701770 3_2:-64750337 None:intergenic
TGTTTCCTTGGCTATCACAG+AGG 0.702795 3_2:+64746150 Msa0417530:CDS
GTTGGTGATATCCAGAACAA+GGG 0.711490 3_2:+64745928 Msa0417530:CDS
GGACAAAGTAGTCGAACATG+CGG 0.723999 3_2:+64750000 Msa0417530:CDS
ATAGGTTAGACAATACACAC+GGG 0.767552 3_2:+64745096 Msa0417530:intron
GTAGTTGTAAACCCTCCTTG+TGG 0.780824 3_2:-64745172 None:intergenic
TATTGTACAAGAAAAGAACG+AGG 0.782276 3_2:+64749979 Msa0417530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATGTTGTTTATATAATT+TGG - chr3_2:64743199-64743218 None:intergenic 10.0%
!!! TTTTATTTGATTTTTGTTTT+TGG + chr3_2:64743865-64743884 Msa0417530:intron 10.0%
!! TTTAGTTAAAGTTAAATTAT+TGG + chr3_2:64744699-64744718 Msa0417530:intron 10.0%
!! AATATGTTTATTACAATTAT+AGG + chr3_2:64745078-64745097 Msa0417530:intron 10.0%
!! AGGTAAATAAAAAAAAAAAT+TGG - chr3_2:64745817-64745836 None:intergenic 10.0%
!! ACTTAAAATATAACTTAAAA+GGG - chr3_2:64745994-64746013 None:intergenic 10.0%
!! AACTTAAAATATAACTTAAA+AGG - chr3_2:64745995-64746014 None:intergenic 10.0%
!!! AATTTATTTTAATGTCATTT+TGG + chr3_2:64746981-64747000 Msa0417530:intron 10.0%
!!! TGTTTTTAGTTAAATATTTA+TGG + chr3_2:64749454-64749473 Msa0417530:intron 10.0%
!! ATACTGAAAATTTATATGTT+GGG - chr3_2:64742719-64742738 Msa0417520:five_prime_UTR 15.0%
!! AATACTGAAAATTTATATGT+TGG - chr3_2:64742720-64742739 Msa0417520:five_prime_UTR 15.0%
!!! TAACACTAATTTTTATTGAT+GGG + chr3_2:64743367-64743386 Msa0417530:intron 15.0%
!!! TGATTCAGTTAATTTTAATT+TGG - chr3_2:64743454-64743473 None:intergenic 15.0%
!!! GTGAATTGTTTTTAAAATAA+CGG - chr3_2:64743499-64743518 None:intergenic 15.0%
!!! TAAGGTATAAATTAGTTTAT+GGG + chr3_2:64743785-64743804 Msa0417530:intron 15.0%
!!! TATCATTGATTTTGATTTTT+GGG + chr3_2:64743837-64743856 Msa0417530:intron 15.0%
!! AAAACAATTAAATTCGTAAA+AGG + chr3_2:64744198-64744217 Msa0417530:intron 15.0%
!!! GACTAAAAAATTCAAAATTT+TGG + chr3_2:64744220-64744239 Msa0417530:intron 15.0%
!!! AAAATTCAAAATTTTGGTTT+TGG + chr3_2:64744226-64744245 Msa0417530:intron 15.0%
!! AATAATAAAAATAAGTAGTG+AGG - chr3_2:64744666-64744685 None:intergenic 15.0%
!! ACAATATTCTCATAAAAAAA+AGG - chr3_2:64745014-64745033 None:intergenic 15.0%
!! TCTATAATGAATTAAATTCA+TGG + chr3_2:64745344-64745363 Msa0417530:intron 15.0%
!! AAAAAGAAAAGAATTAAACT+TGG - chr3_2:64747356-64747375 None:intergenic 15.0%
!!! AGTATATTTTGTATTTTGTT+AGG + chr3_2:64747592-64747611 Msa0417530:intron 15.0%
!! TTAGTTAGTTAGTTAAAAAA+TGG + chr3_2:64748562-64748581 Msa0417530:intron 15.0%
!! TAGTTAGTTAGTTAAAAAAT+GGG + chr3_2:64748563-64748582 Msa0417530:intron 15.0%
!!! AATTTTACCTTCAAATATTT+TGG + chr3_2:64748718-64748737 Msa0417530:intron 15.0%
!!! ATTTTACCTTCAAATATTTT+GGG + chr3_2:64748719-64748738 Msa0417530:intron 15.0%
!!! AGTCTTATTTTTTCAATTAT+TGG + chr3_2:64748893-64748912 Msa0417530:intron 15.0%
!!! AAATTTTCAAATGAATAACA+AGG - chr3_2:64749185-64749204 None:intergenic 15.0%
!! GTTATAGAAATTAAAAAAGT+TGG + chr3_2:64749212-64749231 Msa0417530:intron 15.0%
!!! AATTAAAAGCAATTAGTTTT+GGG - chr3_2:64749315-64749334 None:intergenic 15.0%
!!! TAATTAAAAGCAATTAGTTT+TGG - chr3_2:64749316-64749335 None:intergenic 15.0%
!! ACAATATTAATTATTGAACT+CGG + chr3_2:64749779-64749798 Msa0417530:intron 15.0%
!! TTTCAATTTATATCATAATC+AGG - chr3_2:64750604-64750623 None:intergenic 15.0%
!!! TATTTTCTACAAATTAACTA+AGG + chr3_2:64750740-64750759 Msa0417530:three_prime_UTR 15.0%
!!! TTATATTATTTTCTCTTGAT+AGG + chr3_2:64750930-64750949 Msa0417530:three_prime_UTR 15.0%
!! TACTGAAAATTTATATGTTG+GGG - chr3_2:64742718-64742737 Msa0417520:five_prime_UTR 20.0%
!! AATATTATTTACAATTGTGG+AGG + chr3_2:64743049-64743068 Msa0417530:intron 20.0%
!! ATATTATTTACAATTGTGGA+GGG + chr3_2:64743050-64743069 Msa0417530:intron 20.0%
!!! TATAATTTGGATAAAGCATT+TGG - chr3_2:64743186-64743205 None:intergenic 20.0%
!!! CTAACACTAATTTTTATTGA+TGG + chr3_2:64743366-64743385 Msa0417530:intron 20.0%
!!! AACACTAATTTTTATTGATG+GGG + chr3_2:64743368-64743387 Msa0417530:intron 20.0%
!!! AATTTTAATTTGGTTCAGTT+CGG - chr3_2:64743444-64743463 None:intergenic 20.0%
!!! TTGTTTTTAAAATAACGGTT+CGG - chr3_2:64743494-64743513 None:intergenic 20.0%
!! TATGATTAATTGAGATGTAA+TGG - chr3_2:64743575-64743594 None:intergenic 20.0%
!! CATAAACTAATTTATACCTT+AGG - chr3_2:64743786-64743805 None:intergenic 20.0%
!!! CTAAGGTATAAATTAGTTTA+TGG + chr3_2:64743784-64743803 Msa0417530:intron 20.0%
!!! TGTTTTTTGAGTTTTGTTTT+TGG + chr3_2:64743813-64743832 Msa0417530:intron 20.0%
!!! GTTTTTTGAGTTTTGTTTTT+GGG + chr3_2:64743814-64743833 Msa0417530:intron 20.0%
!!! GTATCATTGATTTTGATTTT+TGG + chr3_2:64743836-64743855 Msa0417530:intron 20.0%
!!! ATTTTGTTTGATTTTTGTCT+GGG + chr3_2:64743893-64743912 Msa0417530:intron 20.0%
!!! ATAAGTGTTTCTATATTGTT+TGG + chr3_2:64744060-64744079 Msa0417530:intron 20.0%
!! GAAACAATCAAATAGATATA+TGG - chr3_2:64744101-64744120 None:intergenic 20.0%
!! ATCATTTCATTACTTAAGAA+AGG - chr3_2:64744123-64744142 None:intergenic 20.0%
!!! AAATTGTCATTTTTTAGTGA+TGG + chr3_2:64744539-64744558 Msa0417530:intron 20.0%
!! AAAGATTAAAAGTCACATTA+AGG + chr3_2:64744722-64744741 Msa0417530:intron 20.0%
!!! ATTAAGGCATTAATTACAAA+AGG + chr3_2:64744738-64744757 Msa0417530:intron 20.0%
!!! GACGTTTTAGAAAATAAAAA+AGG - chr3_2:64744943-64744962 None:intergenic 20.0%
!! AATTCATGAATGAACTAAAT+TGG - chr3_2:64745599-64745618 None:intergenic 20.0%
!!! ATTTTTCACTATCTGATTAT+GGG - chr3_2:64745752-64745771 None:intergenic 20.0%
!!! AATTTTTCACTATCTGATTA+TGG - chr3_2:64745753-64745772 None:intergenic 20.0%
!! AGTGTTAAATTTAACACTTA+AGG + chr3_2:64746265-64746284 Msa0417530:intron 20.0%
!! TAATATTCTGGTAAAAGTAA+TGG + chr3_2:64746332-64746351 Msa0417530:intron 20.0%
!! TAGCTAATAGTATAATACAT+GGG - chr3_2:64746924-64746943 None:intergenic 20.0%
!! TTAGCTAATAGTATAATACA+TGG - chr3_2:64746925-64746944 None:intergenic 20.0%
!!! CTTCTCAAATTTGTTAAAAA+AGG - chr3_2:64747146-64747165 None:intergenic 20.0%
!!! TTTGATCTATTTTTGAATCA+AGG + chr3_2:64747169-64747188 Msa0417530:CDS 20.0%
!!! ATTTTGTATTTTGTTAGGAT+AGG + chr3_2:64747597-64747616 Msa0417530:intron 20.0%
!!! TTTTGTATTTTGTTAGGATA+GGG + chr3_2:64747598-64747617 Msa0417530:intron 20.0%
!! AAACTGTAAGTAATCATAAT+GGG + chr3_2:64748216-64748235 Msa0417530:intron 20.0%
!! AGTTAGTTAGTTAAAAAATG+GGG + chr3_2:64748564-64748583 Msa0417530:intron 20.0%
!! GAACCAATTTAAATATTTGA+GGG - chr3_2:64749087-64749106 None:intergenic 20.0%
!! AGAACCAATTTAAATATTTG+AGG - chr3_2:64749088-64749107 None:intergenic 20.0%
!!! TATACACATAAAAGTTTTAC+AGG + chr3_2:64749277-64749296 Msa0417530:intron 20.0%
!!! TTTTTGGTAAATGTCAATTT+TGG - chr3_2:64749409-64749428 None:intergenic 20.0%
!! TAACTAAAAACATAACACTT+TGG - chr3_2:64749446-64749465 None:intergenic 20.0%
!! TTTAAGAAAATATGGATGTT+CGG - chr3_2:64749490-64749509 None:intergenic 20.0%
!! TAATATTGTGAAAACATGTT+GGG - chr3_2:64749768-64749787 None:intergenic 20.0%
!! TTAATATTGTGAAAACATGT+TGG - chr3_2:64749769-64749788 None:intergenic 20.0%
!!! TTCAGATATTTTTGTAAATC+AGG - chr3_2:64750059-64750078 None:intergenic 20.0%
!!! GATAATTGCTTTTATTTGTA+GGG + chr3_2:64750306-64750325 Msa0417530:intron 20.0%
!! AGCAATATAGCTAAAAATTT+AGG + chr3_2:64750766-64750785 Msa0417530:three_prime_UTR 20.0%
!! GTTTAGTTAATCATTTGTAA+AGG + chr3_2:64750968-64750987 Msa0417530:three_prime_UTR 20.0%
! ACTGAAAATTTATATGTTGG+GGG - chr3_2:64742717-64742736 Msa0417520:five_prime_UTR 25.0%
! AGATTGTAATCACATTCATA+TGG - chr3_2:64742876-64742895 Msa0417520:five_prime_UTR 25.0%
! TTTGACCATTAGCTAATATT+AGG + chr3_2:64742975-64742994 Msa0417530:intron 25.0%
! AATAAAAGTTTAGACTAGAC+AGG - chr3_2:64743002-64743021 None:intergenic 25.0%
! CGCAATATTATTTACAATTG+TGG + chr3_2:64743046-64743065 Msa0417530:intron 25.0%
!!! AGTTGTGTATAGTCATTTTT+CGG - chr3_2:64743103-64743122 None:intergenic 25.0%
!! ATATTCATTGAAACCCATTT+TGG + chr3_2:64743149-64743168 Msa0417530:intron 25.0%
!!! GATTTTGTTTGATTTTTGTC+TGG + chr3_2:64743892-64743911 Msa0417530:intron 25.0%
!!! TTTTGTTTCTGGTATGATTT+TGG + chr3_2:64743924-64743943 Msa0417530:intron 25.0%
!!! TTTGTTTCTGGTATGATTTT+GGG + chr3_2:64743925-64743944 Msa0417530:intron 25.0%
!! TTGTTTGGACTTGTTTAATT+AGG + chr3_2:64744075-64744094 Msa0417530:intron 25.0%
!!! TCAAAATTTTGGTTTTGGTT+CGG + chr3_2:64744231-64744250 Msa0417530:intron 25.0%
!!! CAAATTTGTTAGAGAATGAA+AGG - chr3_2:64744442-64744461 None:intergenic 25.0%
! AAACGACTATTATTTAGAGA+CGG - chr3_2:64744574-64744593 None:intergenic 25.0%
! CTCTAAATAATAGTCGTTTA+AGG + chr3_2:64744575-64744594 Msa0417530:intron 25.0%
! TAAAAAAGGTAGCAAAATGT+TGG - chr3_2:64744929-64744948 None:intergenic 25.0%
! ATTCATGGTTATTGAACAAT+TGG + chr3_2:64745359-64745378 Msa0417530:intron 25.0%
! GAACTCTGAATGTAAAATAA+TGG - chr3_2:64745547-64745566 None:intergenic 25.0%
! AAGAAGATCTTAAACATACT+GGG - chr3_2:64745849-64745868 None:intergenic 25.0%
! AAAGAAGATCTTAAACATAC+TGG - chr3_2:64745850-64745869 None:intergenic 25.0%
! TGTGTACAAGTTTAATATTC+TGG + chr3_2:64746320-64746339 Msa0417530:intron 25.0%
! TATCTACTAAAATGCAAACT+TGG + chr3_2:64746435-64746454 Msa0417530:intron 25.0%
!!! TTGATTTTAACATCAATGCA+CGG - chr3_2:64746751-64746770 None:intergenic 25.0%
!! TACTTAAACGGATTTAAAGT+TGG + chr3_2:64746787-64746806 Msa0417530:CDS 25.0%
!! CTTCTTTGATTTATATGTAG+AGG - chr3_2:64746827-64746846 None:intergenic 25.0%
! TAATAGTATAATACATGGGA+TGG - chr3_2:64746920-64746939 None:intergenic 25.0%
!!! ATTTTAATGTCATTTTGGTG+AGG + chr3_2:64746986-64747005 Msa0417530:intron 25.0%
! TTCTCTTAGAACTGTATTTA+AGG - chr3_2:64747077-64747096 None:intergenic 25.0%
!! AAATGTATATTTTGCGGAAA+GGG + chr3_2:64747223-64747242 Msa0417530:intron 25.0%
! GGTAAAAGGGATTTATAATA+GGG + chr3_2:64747244-64747263 Msa0417530:intron 25.0%
! AAAGAATTAAACTTGGCATA+GGG - chr3_2:64747349-64747368 None:intergenic 25.0%
! AAAAGAATTAAACTTGGCAT+AGG - chr3_2:64747350-64747369 None:intergenic 25.0%
! AAAAGTAGTTAGGAAAGTTA+GGG + chr3_2:64747536-64747555 Msa0417530:intron 25.0%
!! GATTGGTTGGTTAAATAAAT+GGG + chr3_2:64747689-64747708 Msa0417530:intron 25.0%
!! ATTGGTTGGTTAAATAAATG+GGG + chr3_2:64747690-64747709 Msa0417530:intron 25.0%
! TGTTATTGAATGAATCATAG+AGG - chr3_2:64747817-64747836 None:intergenic 25.0%
! CAAACTGTAAGTAATCATAA+TGG + chr3_2:64748215-64748234 Msa0417530:intron 25.0%
! ATTAAATCCAAACATAAGCT+TGG - chr3_2:64748301-64748320 None:intergenic 25.0%
! AAGCTTATGTTTGGATTTAA+TGG + chr3_2:64748300-64748319 Msa0417530:intron 25.0%
! AGCTTATGTTTGGATTTAAT+GGG + chr3_2:64748301-64748320 Msa0417530:intron 25.0%
! CTCTTTGAATTCCATAAATT+TGG - chr3_2:64748333-64748352 None:intergenic 25.0%
! ATTCTTTCTACTATATGTTG+AGG - chr3_2:64748384-64748403 None:intergenic 25.0%
! TAAAAAATGGGGAGAAATAT+AGG + chr3_2:64748575-64748594 Msa0417530:intron 25.0%
! AAAAAATGGGGAGAAATATA+GGG + chr3_2:64748576-64748595 Msa0417530:intron 25.0%
! TTGAATAAATGACTGAGAAT+AGG - chr3_2:64748677-64748696 None:intergenic 25.0%
! TTGCCCTCAAATATTTAAAT+TGG + chr3_2:64749081-64749100 Msa0417530:intron 25.0%
! AGACTTTCAGAAAAGTTTAA+AGG - chr3_2:64749240-64749259 None:intergenic 25.0%
! CATAGTTAATTTCCGATATA+GGG + chr3_2:64749348-64749367 Msa0417530:intron 25.0%
! ATAGTTAATTTCCGATATAG+GGG + chr3_2:64749349-64749368 Msa0417530:intron 25.0%
!!! GGTTGTTTACTTCTTATTTT+TGG - chr3_2:64749425-64749444 None:intergenic 25.0%
! TTAAGAAAATATGGATGTTC+GGG - chr3_2:64749489-64749508 None:intergenic 25.0%
! ATAGCAGGTTTAAGAAAATA+TGG - chr3_2:64749498-64749517 None:intergenic 25.0%
! TAACCTATTATGTTAAATGC+AGG + chr3_2:64749596-64749615 Msa0417530:intron 25.0%
! AATCCTGCATTTAACATAAT+AGG - chr3_2:64749602-64749621 None:intergenic 25.0%
!! TACTTTTACTTCAATCATGA+AGG + chr3_2:64749726-64749745 Msa0417530:intron 25.0%
! ATCGATATAAACATTGAATG+TGG - chr3_2:64750233-64750252 None:intergenic 25.0%
!!! CGATAATTGCTTTTATTTGT+AGG + chr3_2:64750305-64750324 Msa0417530:intron 25.0%
! AAAAAACGTGATAAGTTTGA+GGG - chr3_2:64750857-64750876 None:intergenic 25.0%
GTTAAGCAGAATATGAGTTT+GGG - chr3_2:64742681-64742700 Msa0417520:five_prime_UTR 30.0%
CTACTACTATTGCTACTATT+CGG + chr3_2:64742807-64742826 Msa0417530:intron 30.0%
TATTTGTGCATGCAATTTCT+TGG + chr3_2:64743018-64743037 Msa0417530:intron 30.0%
CTATACACAACTTTATCAGA+AGG + chr3_2:64743111-64743130 Msa0417530:intron 30.0%
GGATGTCTAATAACCAAAAT+GGG - chr3_2:64743165-64743184 None:intergenic 30.0%
TGGATGTCTAATAACCAAAA+TGG - chr3_2:64743166-64743185 None:intergenic 30.0%
! TTTATTGATGGGGTATTTGT+AGG + chr3_2:64743378-64743397 Msa0417530:intron 30.0%
AATTCACTAACTGAATCGAA+CGG + chr3_2:64743512-64743531 Msa0417530:intron 30.0%
AATCGAACGGTTATTAAACT+CGG + chr3_2:64743525-64743544 Msa0417530:intron 30.0%
AAATCAATGAGGTCACATTT+CGG - chr3_2:64743702-64743721 None:intergenic 30.0%
ATATAGCATATGTTGTGCTA+AGG + chr3_2:64744004-64744023 Msa0417530:intron 30.0%
TCGGTTAATAGATATGCAAA+TGG + chr3_2:64744260-64744279 Msa0417530:intron 30.0%
AGAGCAAATACAAATACCTA+GGG - chr3_2:64744418-64744437 None:intergenic 30.0%
AAGAGCAAATACAAATACCT+AGG - chr3_2:64744419-64744438 None:intergenic 30.0%
TCTAACAAATTTGATGCCAT+TGG + chr3_2:64744449-64744468 Msa0417530:intron 30.0%
TTATGAAAGACACAATCCAT+CGG - chr3_2:64744488-64744507 None:intergenic 30.0%
AAACGTCAATAATACTGAGA+CGG + chr3_2:64744956-64744975 Msa0417530:intron 30.0%
TATAGGTTAGACAATACACA+CGG + chr3_2:64745095-64745114 Msa0417530:intron 30.0%
TGAGTGTATATGTTGAAAGA+TGG - chr3_2:64745197-64745216 None:intergenic 30.0%
TCTTTCAACATATACACTCA+TGG + chr3_2:64745197-64745216 Msa0417530:CDS 30.0%
!!! TCCTCTATTTTTATCAGTTG+TGG + chr3_2:64745416-64745435 Msa0417530:CDS 30.0%
TCCACAACTGATAAAAATAG+AGG - chr3_2:64745420-64745439 None:intergenic 30.0%
CATGAATGAACTAAATTGGA+AGG - chr3_2:64745595-64745614 None:intergenic 30.0%
TCTCTTTCTACCAATCAATT+TGG + chr3_2:64745618-64745637 Msa0417530:CDS 30.0%
AAAACACCAAGAACAGAAAA+AGG - chr3_2:64745710-64745729 None:intergenic 30.0%
!! TGGTGTTTTAGATTATGCAT+TGG + chr3_2:64745721-64745740 Msa0417530:intron 30.0%
!! GTTTTAGATTATGCATTGGT+TGG + chr3_2:64745725-64745744 Msa0417530:intron 30.0%
ATCTTAAGCACAAGAAAGTT+TGG - chr3_2:64745785-64745804 None:intergenic 30.0%
! GTTTTCTTTTACTCTGCAAA+TGG + chr3_2:64746093-64746112 Msa0417530:CDS 30.0%
GAAACAACATACTGAACTAA+AGG - chr3_2:64746136-64746155 None:intergenic 30.0%
!!! AGCACTTGGTTTTAAATTAC+TGG + chr3_2:64746202-64746221 Msa0417530:intron 30.0%
!!! ATGGTGCTTTTTTGTGAATA+TGG + chr3_2:64746351-64746370 Msa0417530:intron 30.0%
! TGCATATAACTTCACAGTTT+TGG - chr3_2:64746377-64746396 None:intergenic 30.0%
TACTAAAATGCAAACTTGGT+TGG + chr3_2:64746439-64746458 Msa0417530:intron 30.0%
ATTTGTCGTTCATGCTTAAT+AGG - chr3_2:64746512-64746531 None:intergenic 30.0%
TATTAAGCATGAACGACAAA+TGG + chr3_2:64746511-64746530 Msa0417530:intron 30.0%
! TTCAAAAGCTGAATGGTTTT+TGG + chr3_2:64746586-64746605 Msa0417530:intron 30.0%
ATAAATGCTTGCTTTGTGTT+TGG + chr3_2:64746625-64746644 Msa0417530:intron 30.0%
TAAGATACTGTGACAAATCA+TGG - chr3_2:64746671-64746690 None:intergenic 30.0%
! AAAGTGTTACAAAAATGCAC+AGG - chr3_2:64746713-64746732 None:intergenic 30.0%
! TTTGTAACACTTTTCATTCC+AGG + chr3_2:64746720-64746739 Msa0417530:intron 30.0%
! TTGTAACACTTTTCATTCCA+GGG + chr3_2:64746721-64746740 Msa0417530:intron 30.0%
! GCATTGATGTTAAAATCAAG+TGG + chr3_2:64746752-64746771 Msa0417530:CDS 30.0%
CCAAATGATCTGTACTTAAA+CGG + chr3_2:64746775-64746794 Msa0417530:CDS 30.0%
! TTAAACGGATTTAAAGTTGG+AGG + chr3_2:64746790-64746809 Msa0417530:CDS 30.0%
GTGAACAGGATTTAATATAC+TGG - chr3_2:64746949-64746968 None:intergenic 30.0%
AACAAATTCCATGATTTCAC+AGG + chr3_2:64747013-64747032 Msa0417530:intron 30.0%
ACTGTATTTAAGGATGTTGT+TGG - chr3_2:64747067-64747086 None:intergenic 30.0%
!! GAACATCTTCTCTTTGAAAT+TGG - chr3_2:64747117-64747136 None:intergenic 30.0%
ATTTCAAAGAGAAGATGTTC+TGG + chr3_2:64747117-64747136 Msa0417530:CDS 30.0%
! CGAACCAAATGTATATTTTG+CGG + chr3_2:64747217-64747236 Msa0417530:intron 30.0%
CTTTCCGCAAAATATACATT+TGG - chr3_2:64747224-64747243 None:intergenic 30.0%
! CAAATGTATATTTTGCGGAA+AGG + chr3_2:64747222-64747241 Msa0417530:intron 30.0%
GGGTAAAAGGGATTTATAAT+AGG + chr3_2:64747243-64747262 Msa0417530:intron 30.0%
AAGAATTAAACTTGGCATAG+GGG - chr3_2:64747348-64747367 None:intergenic 30.0%
ATAACAACTAGGGTTTATAG+AGG - chr3_2:64747501-64747520 None:intergenic 30.0%
CAAAAGTAGTTAGGAAAGTT+AGG + chr3_2:64747535-64747554 Msa0417530:intron 30.0%
!! GGATTGGTTGGTTAAATAAA+TGG + chr3_2:64747688-64747707 Msa0417530:intron 30.0%
! TTGGTTGGTTAAATAAATGG+GGG + chr3_2:64747691-64747710 Msa0417530:intron 30.0%
GAATTCCATAAATTTGGACT+TGG - chr3_2:64748327-64748346 None:intergenic 30.0%
TTAACTGTAGACGAATTGTT+GGG - chr3_2:64748359-64748378 None:intergenic 30.0%
ATTAACTGTAGACGAATTGT+TGG - chr3_2:64748360-64748379 None:intergenic 30.0%
TCTATGATAAGTGATCATCA+AGG + chr3_2:64748416-64748435 Msa0417530:intron 30.0%
CTATATGTTTGATCACTCAA+TGG + chr3_2:64748455-64748474 Msa0417530:intron 30.0%
! CCTATAAGGTCCAATTTTAA+TGG - chr3_2:64748484-64748503 None:intergenic 30.0%
CCATTAAAATTGGACCTTAT+AGG + chr3_2:64748481-64748500 Msa0417530:intron 30.0%
!! TAACTACTTTTGCACCTATA+AGG - chr3_2:64748498-64748517 None:intergenic 30.0%
TTATAGGTGCAAAAGTAGTT+AGG + chr3_2:64748497-64748516 Msa0417530:intron 30.0%
TATAGGTGCAAAAGTAGTTA+GGG + chr3_2:64748498-64748517 Msa0417530:intron 30.0%
AAAAATGGGGAGAAATATAG+GGG + chr3_2:64748577-64748596 Msa0417530:intron 30.0%
GATTCGATAGTTGTTATGAA+CGG + chr3_2:64748618-64748637 Msa0417530:intron 30.0%
TAAGAGCCCAAAATATTTGA+AGG - chr3_2:64748728-64748747 None:intergenic 30.0%
AAGAAGAAAAATCACTCACT+TGG + chr3_2:64748815-64748834 Msa0417530:intron 30.0%
ACTACTAAACGAATAACAAG+GGG - chr3_2:64748876-64748895 None:intergenic 30.0%
GACTACTAAACGAATAACAA+GGG - chr3_2:64748877-64748896 None:intergenic 30.0%
AGACTACTAAACGAATAACA+AGG - chr3_2:64748878-64748897 None:intergenic 30.0%
GGTGACAAAAAAAAAAGAGA+AGG - chr3_2:64748919-64748938 None:intergenic 30.0%
ATACACTTATGACAAAGCTA+AGG - chr3_2:64749033-64749052 None:intergenic 30.0%
CCTATATCGGAAATTAACTA+TGG - chr3_2:64749350-64749369 None:intergenic 30.0%
CCATAGTTAATTTCCGATAT+AGG + chr3_2:64749347-64749366 Msa0417530:intron 30.0%
AGATGTATACAACATCACAT+TGG - chr3_2:64749378-64749397 None:intergenic 30.0%
ATCCGACGTTTAAGAAAATT+TGG + chr3_2:64749569-64749588 Msa0417530:intron 30.0%
! CTCCAAATTTTCTTAAACGT+CGG - chr3_2:64749574-64749593 None:intergenic 30.0%
CTTGTAATATAGTTCCTCTA+GGG - chr3_2:64749630-64749649 None:intergenic 30.0%
TCTTGTAATATAGTTCCTCT+AGG - chr3_2:64749631-64749650 None:intergenic 30.0%
AGGAACTATATTACAAGACA+TGG + chr3_2:64749633-64749652 Msa0417530:CDS 30.0%
! AATAAAAGCGCATGATAAAG+AGG - chr3_2:64749702-64749721 None:intergenic 30.0%
ATCCTAGTTATGCTTTCATT+TGG + chr3_2:64749860-64749879 Msa0417530:intron 30.0%
! TTCCAAATGAAAGCATAACT+AGG - chr3_2:64749865-64749884 None:intergenic 30.0%
TTATTGCATACTAGTATACG+TGG + chr3_2:64749898-64749917 Msa0417530:intron 30.0%
TATTGTACAAGAAAAGAACG+AGG + chr3_2:64749979-64749998 Msa0417530:CDS 30.0%
TACAGCAAATTTCACATCAA+TGG - chr3_2:64750099-64750118 None:intergenic 30.0%
!!! TACAGCTTTGACTTTTTCAA+AGG + chr3_2:64750648-64750667 Msa0417530:intron 30.0%
GAAAAAACGTGATAAGTTTG+AGG - chr3_2:64750858-64750877 None:intergenic 30.0%
TAACTAAACAATCATGAGCT+TGG - chr3_2:64750957-64750976 None:intergenic 30.0%
TAATCATTTGTAAAGGAGTG+TGG + chr3_2:64750975-64750994 Msa0417530:three_prime_UTR 30.0%
GGTTAAGCAGAATATGAGTT+TGG - chr3_2:64742682-64742701 Msa0417520:five_prime_UTR 35.0%
ACTCATATTCTGCTTAACCT+CGG + chr3_2:64742683-64742702 Msa0417530:CDS 35.0%
GAAAATTTATATGTTGGGGG+CGG - chr3_2:64742714-64742733 Msa0417520:five_prime_UTR 35.0%
TGAAGAAAATCGCAGAGAAA+GGG - chr3_2:64742743-64742762 Msa0417520:five_prime_UTR 35.0%
TTGAAGAAAATCGCAGAGAA+AGG - chr3_2:64742744-64742763 Msa0417520:five_prime_UTR 35.0%
! TTTCTCTGCGATTTTCTTCA+AGG + chr3_2:64742743-64742762 Msa0417530:CDS 35.0%
! TTCTCTGCGATTTTCTTCAA+GGG + chr3_2:64742744-64742763 Msa0417530:CDS 35.0%
GTTGATTGTGTGTTTCTTTG+TGG + chr3_2:64742902-64742921 Msa0417530:intron 35.0%
CAGGTCCTAATATTAGCTAA+TGG - chr3_2:64742983-64743002 None:intergenic 35.0%
!! AGCGGATATTGGTTTATGTT+TGG - chr3_2:64743252-64743271 None:intergenic 35.0%
! AAAGTAAGTTGAGCGGATAT+TGG - chr3_2:64743263-64743282 None:intergenic 35.0%
!! AAGTATGTGGTTTGGTTATG+CGG - chr3_2:64743292-64743311 None:intergenic 35.0%
! AAAGCACTAAGTATGTGGTT+TGG - chr3_2:64743300-64743319 None:intergenic 35.0%
AAACCACATACTTAGTGCTT+TGG + chr3_2:64743299-64743318 Msa0417530:intron 35.0%
! AATCGTTTCGGTTCAGTTTT+TGG - chr3_2:64743419-64743438 None:intergenic 35.0%
TTCAGTTCGGTTAATCGTTT+CGG - chr3_2:64743431-64743450 None:intergenic 35.0%
TGAGATGTAATGGTTCAGTT+CGG - chr3_2:64743565-64743584 None:intergenic 35.0%
TGAGAATCGCAAAATCAATG+AGG - chr3_2:64743713-64743732 None:intergenic 35.0%
!! GGGTATGATGATTTTGTTTC+TGG + chr3_2:64743913-64743932 Msa0417530:intron 35.0%
!! GTGCTAAGGTTGCTTATTTT+TGG + chr3_2:64744018-64744037 Msa0417530:intron 35.0%
!!! ATTTTGGTTTTGGTTCGGTT+CGG + chr3_2:64744236-64744255 Msa0417530:intron 35.0%
ACTGAACCAAAGTTATGGTT+CGG - chr3_2:64744290-64744309 None:intergenic 35.0%
! ACCATAACTTTGGTTCAGTT+CGG + chr3_2:64744291-64744310 Msa0417530:intron 35.0%
! GGTTAGTTCCAAACCTTAAA+CGG + chr3_2:64744312-64744331 Msa0417530:intron 35.0%
AAACCTTAAACGGTTCAGTT+CGG + chr3_2:64744322-64744341 Msa0417530:intron 35.0%
AAATACAAATACCTAGGGGT+GGG - chr3_2:64744413-64744432 None:intergenic 35.0%
GAGCAAATACAAATACCTAG+GGG - chr3_2:64744417-64744436 None:intergenic 35.0%
GACTATTATTTAGAGACGGA+GGG - chr3_2:64744570-64744589 None:intergenic 35.0%
! AAGAAAGCACGTACAAATAG+AGG + chr3_2:64744835-64744854 Msa0417530:intron 35.0%
ACAAATAGAGGAGGAGTAAA+AGG + chr3_2:64744847-64744866 Msa0417530:intron 35.0%
ATAGGTTAGACAATACACAC+GGG + chr3_2:64745096-64745115 Msa0417530:intron 35.0%
GTTGTTCAGCTAACAATCTA+TGG - chr3_2:64745278-64745297 None:intergenic 35.0%
TAGATTGTTAGCTGAACAAC+TGG + chr3_2:64745278-64745297 Msa0417530:intron 35.0%
AGATTGTTAGCTGAACAACT+GGG + chr3_2:64745279-64745298 Msa0417530:intron 35.0%
TGGATAGTTCTTTCTTGTCA+GGG - chr3_2:64745527-64745546 None:intergenic 35.0%
ATGGATAGTTCTTTCTTGTC+AGG - chr3_2:64745528-64745547 None:intergenic 35.0%
TTTCTACCAATCAATTTGGC+AGG + chr3_2:64745622-64745641 Msa0417530:CDS 35.0%
ACTTAAAAGGGACAGAATCA+TGG - chr3_2:64745982-64746001 None:intergenic 35.0%
GCAGAGTAAAAGAAAACATC+AGG - chr3_2:64746090-64746109 None:intergenic 35.0%
! TTCTTTTACTCTGCAAATGG+AGG + chr3_2:64746096-64746115 Msa0417530:CDS 35.0%
!! AGTTCAGTATGTTGTTTCCT+TGG + chr3_2:64746138-64746157 Msa0417530:CDS 35.0%
GTGACAAAAATGTAAGCACT+TGG + chr3_2:64746188-64746207 Msa0417530:intron 35.0%
TTTCCCTAACCAAATTCACT+GGG - chr3_2:64746243-64746262 None:intergenic 35.0%
AGACAACTCTCATCATCATA+TGG + chr3_2:64746560-64746579 Msa0417530:intron 35.0%
ATGGAGTTTCAAAAGCTGAA+TGG + chr3_2:64746579-64746598 Msa0417530:intron 35.0%
CCGTTTAAGTACAGATCATT+TGG - chr3_2:64746778-64746797 None:intergenic 35.0%
AAGAAGTTCAATATCAGTGC+AGG + chr3_2:64746841-64746860 Msa0417530:CDS 35.0%
CAATATCAGTGCAGGTAATA+AGG + chr3_2:64746849-64746868 Msa0417530:intron 35.0%
! TGCAGGTAATAAGGTATTCT+TGG + chr3_2:64746858-64746877 Msa0417530:intron 35.0%
TTAAATTCTCTGCAGTGAAC+AGG - chr3_2:64746963-64746982 None:intergenic 35.0%
TTCCATGATTTCACAGGAAT+AGG + chr3_2:64747019-64747038 Msa0417530:intron 35.0%
ATCCTATTCCTGTGAAATCA+TGG - chr3_2:64747024-64747043 None:intergenic 35.0%
!! AGTTCTAAGAGAATTGTCTG+TGG + chr3_2:64747084-64747103 Msa0417530:CDS 35.0%
!! GTTCTAAGAGAATTGTCTGT+GGG + chr3_2:64747085-64747104 Msa0417530:CDS 35.0%
! TATTTTGCGGAAAGGGTAAA+AGG + chr3_2:64747230-64747249 Msa0417530:intron 35.0%
! ATTTTGCGGAAAGGGTAAAA+GGG + chr3_2:64747231-64747250 Msa0417530:intron 35.0%
! AAATTGCTTGCTAACTTACC+AGG + chr3_2:64747298-64747317 Msa0417530:intron 35.0%
AGTTGTGCTATGTCTTGTAA+TGG + chr3_2:64747379-64747398 Msa0417530:intron 35.0%
!! GCCTTTACTATTGACTTAGA+GGG + chr3_2:64747401-64747420 Msa0417530:intron 35.0%
ACCCTCTAAGTCAATAGTAA+AGG - chr3_2:64747405-64747424 None:intergenic 35.0%
! GACATATGGTTGTTACCTTT+TGG + chr3_2:64747427-64747446 Msa0417530:intron 35.0%
TTAGGAAAGTTAGGGTAGTT+AGG + chr3_2:64747544-64747563 Msa0417530:intron 35.0%
TTAACCAACCAATCCCTATA+AGG - chr3_2:64747683-64747702 None:intergenic 35.0%
! TGGTTGGTTAAATAAATGGG+GGG + chr3_2:64747692-64747711 Msa0417530:intron 35.0%
TAAATAAATGGGGGGAATGT+AGG + chr3_2:64747700-64747719 Msa0417530:intron 35.0%
AAATAAATGGGGGGAATGTA+GGG + chr3_2:64747701-64747720 Msa0417530:intron 35.0%
GAAGGATCATCATGTGAATT+TGG + chr3_2:64747728-64747747 Msa0417530:intron 35.0%
! TCATCATGTGAATTTGGTGA+TGG + chr3_2:64747734-64747753 Msa0417530:intron 35.0%
AGGAGAAATCCTTTGTACAT+TGG + chr3_2:64747761-64747780 Msa0417530:intron 35.0%
CAACAGTTTCCAATGTACAA+AGG - chr3_2:64747773-64747792 None:intergenic 35.0%
CTTTGTACATTGGAAACTGT+TGG + chr3_2:64747771-64747790 Msa0417530:intron 35.0%
! TTCTCTTGTTTCCCAACAAT+TGG + chr3_2:64747879-64747898 Msa0417530:intron 35.0%
AACCTGCCAGATATCTTATT+GGG + chr3_2:64747905-64747924 Msa0417530:intron 35.0%
ATATCTTATTGGGGGAAGAA+AGG + chr3_2:64747915-64747934 Msa0417530:intron 35.0%
TATCTTATTGGGGGAAGAAA+GGG + chr3_2:64747916-64747935 Msa0417530:intron 35.0%
TCCAAAACAGCAACAAAGTA+AGG + chr3_2:64748101-64748120 Msa0417530:intron 35.0%
!!! ACCTTACTTTGTTGCTGTTT+TGG - chr3_2:64748105-64748124 None:intergenic 35.0%
!! AATCTTCCCACTTTGCTTTT+GGG - chr3_2:64748175-64748194 None:intergenic 35.0%
! AAATCTTCCCACTTTGCTTT+TGG - chr3_2:64748176-64748195 None:intergenic 35.0%
AAAAGCAAAGTGGGAAGATT+TGG + chr3_2:64748175-64748194 Msa0417530:intron 35.0%
TCAATGGCAGCCATTAAAAT+TGG + chr3_2:64748471-64748490 Msa0417530:intron 35.0%
! TGTTTGTTAAGACTTCAGAG+TGG + chr3_2:64748535-64748554 Msa0417530:intron 35.0%
AAAATGGGGAGAAATATAGG+GGG + chr3_2:64748578-64748597 Msa0417530:intron 35.0%
AAACGAATAACAAGGGGTAA+GGG - chr3_2:64748870-64748889 None:intergenic 35.0%
TAAACGAATAACAAGGGGTA+AGG - chr3_2:64748871-64748890 None:intergenic 35.0%
TCACCTAAGAACTTCAAAGA+GGG + chr3_2:64748934-64748953 Msa0417530:intron 35.0%
GTTCTTGAAGTGACATCAAA+TGG + chr3_2:64749103-64749122 Msa0417530:intron 35.0%
!! CTCATTAGCTTTGTTGTTCT+AGG - chr3_2:64749131-64749150 None:intergenic 35.0%
CAATCAGCACAAAATATAGC+AGG - chr3_2:64749513-64749532 None:intergenic 35.0%
!! CTGCTATATTTTGTGCTGAT+TGG + chr3_2:64749511-64749530 Msa0417530:intron 35.0%
CAATCATGAAGGAAACGATT+CGG + chr3_2:64749737-64749756 Msa0417530:intron 35.0%
ACATTCAAAATGTCATGCAG+TGG + chr3_2:64749947-64749966 Msa0417530:intron 35.0%
TGTCAACTTGACATCATTAC+TGG + chr3_2:64750267-64750286 Msa0417530:intron 35.0%
TCCATTACCTATTACCATCA+GGG - chr3_2:64750392-64750411 None:intergenic 35.0%
TTCCATTACCTATTACCATC+AGG - chr3_2:64750393-64750412 None:intergenic 35.0%
!!! TTTTCAAAGGACTAGTCAGA+AGG + chr3_2:64750661-64750680 Msa0417530:CDS 35.0%
!!! TATCACGTTTTTTCCTTGTC+TGG + chr3_2:64750864-64750883 Msa0417530:three_prime_UTR 35.0%
CTCATATTCTGCTTAACCTC+GGG + chr3_2:64742684-64742703 Msa0417530:CDS 40.0%
CGTTGTGAATTGAAGAACAG+AGG - chr3_2:64742770-64742789 Msa0417520:five_prime_UTR 40.0%
GTTCTTCAATTCACAACGTC+AGG + chr3_2:64742772-64742791 Msa0417530:CDS 40.0%
! GTGGTGAAAAGTAAGTTGAG+CGG - chr3_2:64743270-64743289 None:intergenic 40.0%
! GTTCCAAAGCACTAAGTATG+TGG - chr3_2:64743305-64743324 None:intergenic 40.0%
TCAGAGAAGAAGAGGTCAAT+TGG - chr3_2:64743643-64743662 None:intergenic 40.0%
AGTGAGAATCAGAGAAGAAG+AGG - chr3_2:64743651-64743670 None:intergenic 40.0%
TTGAAGCTAGCTCACATGAA+CGG + chr3_2:64743674-64743693 Msa0417530:intron 40.0%
TACCTTAGGAATCGCAAAAG+AGG - chr3_2:64743772-64743791 None:intergenic 40.0%
ACCGAACTGAACCAAAGTTA+TGG - chr3_2:64744295-64744314 None:intergenic 40.0%
! GAACTGAACCGTTTAAGGTT+TGG - chr3_2:64744323-64744342 None:intergenic 40.0%
TAACCGAACTGAACCGTTTA+AGG - chr3_2:64744328-64744347 None:intergenic 40.0%
CAAATACAAATACCTAGGGG+TGG - chr3_2:64744414-64744433 None:intergenic 40.0%
CGACTATTATTTAGAGACGG+AGG - chr3_2:64744571-64744590 None:intergenic 40.0%
CCATGTGTGAAGTAAGTACT+CGG - chr3_2:64744793-64744812 None:intergenic 40.0%
AAAGCACGTACAAATAGAGG+AGG + chr3_2:64744838-64744857 Msa0417530:intron 40.0%
GTCAATAATACTGAGACGGA+GGG + chr3_2:64744960-64744979 Msa0417530:intron 40.0%
! ATTGTGACACCTTTTCCACT+TGG + chr3_2:64745029-64745048 Msa0417530:intron 40.0%
AAATACCAACAGAGTCCAAG+TGG - chr3_2:64745047-64745066 None:intergenic 40.0%
! AAGATAGCGCTGAAAGTAAC+AGG - chr3_2:64745244-64745263 None:intergenic 40.0%
! AGTTGTGGATTGCAGTTTGT+TGG + chr3_2:64745431-64745450 Msa0417530:CDS 40.0%
!! TGCAGTTTGTTGGTTCTATG+TGG + chr3_2:64745441-64745460 Msa0417530:CDS 40.0%
AATTTGGCAGGCTTCTCATA+TGG + chr3_2:64745634-64745653 Msa0417530:CDS 40.0%
TCATGTGTCGAAGTTAACTC+AGG - chr3_2:64745663-64745682 None:intergenic 40.0%
! CTTGCACCTTTTTCTGTTCT+TGG + chr3_2:64745701-64745720 Msa0417530:intron 40.0%
AACATACTGGGAATGACAAC+AGG - chr3_2:64745837-64745856 None:intergenic 40.0%
!! TGTTGGTGATATCCAGAACA+AGG + chr3_2:64745927-64745946 Msa0417530:CDS 40.0%
!! GTTGGTGATATCCAGAACAA+GGG + chr3_2:64745928-64745947 Msa0417530:CDS 40.0%
AACAAGGGAAGAGGTTTGAT+CGG + chr3_2:64745943-64745962 Msa0417530:intron 40.0%
GAAAACATCAGGCAACCTAA+TGG - chr3_2:64746079-64746098 None:intergenic 40.0%
TTTACTCTGCAAATGGAGGA+TGG + chr3_2:64746100-64746119 Msa0417530:CDS 40.0%
TCTCCCAGTGAATTTGGTTA+GGG + chr3_2:64746237-64746256 Msa0417530:intron 40.0%
CTTTCCCTAACCAAATTCAC+TGG - chr3_2:64746244-64746263 None:intergenic 40.0%
ACTTAAGGCTGTATGCTTTC+AGG + chr3_2:64746280-64746299 Msa0417530:intron 40.0%
!! ATGGCAGCAACATTTTTGAG+AGG + chr3_2:64746530-64746549 Msa0417530:intron 40.0%
!! TGGCAGCAACATTTTTGAGA+GGG + chr3_2:64746531-64746550 Msa0417530:intron 40.0%
CTGTGACAAATCATGGAAGT+TGG - chr3_2:64746664-64746683 None:intergenic 40.0%
ACATGGGATGGAAATGCAAT+TGG - chr3_2:64746908-64746927 None:intergenic 40.0%
ATATTGCACTAGTGCATCCT+GGG - chr3_2:64747270-64747289 None:intergenic 40.0%
TATATTGCACTAGTGCATCC+TGG - chr3_2:64747271-64747290 None:intergenic 40.0%
AGGATAATGAAGTTTACGCC+TGG - chr3_2:64747319-64747338 None:intergenic 40.0%
!! GGCCTTTACTATTGACTTAG+AGG + chr3_2:64747400-64747419 Msa0417530:intron 40.0%
CAATACTTTACCCAGTATGC+AGG - chr3_2:64747468-64747487 None:intergenic 40.0%
AACCCTAGTTGTTATGACTG+AGG + chr3_2:64747506-64747525 Msa0417530:intron 40.0%
CTCCTCAGTCATAACAACTA+GGG - chr3_2:64747511-64747530 None:intergenic 40.0%
AGGAGGATGCAAAAGTAGTT+AGG + chr3_2:64747526-64747545 Msa0417530:intron 40.0%
AGTTAAAGAGCGGAGTGATA+AGG - chr3_2:64747636-64747655 None:intergenic 40.0%
AATAAATGGGGGGAATGTAG+GGG + chr3_2:64747702-64747721 Msa0417530:intron 40.0%
!! GTGAATTTGGTGATGGTGAA+AGG + chr3_2:64747741-64747760 Msa0417530:intron 40.0%
CAATAAGATATCTGGCAGGT+TGG - chr3_2:64747906-64747925 None:intergenic 40.0%
CAACCTGCCAGATATCTTAT+TGG + chr3_2:64747904-64747923 Msa0417530:intron 40.0%
ACCTGCCAGATATCTTATTG+GGG + chr3_2:64747906-64747925 Msa0417530:intron 40.0%
TCTTCCCCCAATAAGATATC+TGG - chr3_2:64747914-64747933 None:intergenic 40.0%
! AACTTCAGGGTGTTCTTGAA+AGG + chr3_2:64747941-64747960 Msa0417530:intron 40.0%
! ACTTCAGGGTGTTCTTGAAA+GGG + chr3_2:64747942-64747961 Msa0417530:intron 40.0%
!! TTGAAAGGGAGCACTGATAA+TGG + chr3_2:64747956-64747975 Msa0417530:intron 40.0%
!! TGAAAGGGAGCACTGATAAT+GGG + chr3_2:64747957-64747976 Msa0417530:intron 40.0%
TGGCTGATAATTCAGTACCA+CGG + chr3_2:64748045-64748064 Msa0417530:intron 40.0%
AATTCAGTACCACGGTAATG+AGG + chr3_2:64748053-64748072 Msa0417530:intron 40.0%
ATTCAGTACCACGGTAATGA+GGG + chr3_2:64748054-64748073 Msa0417530:intron 40.0%
TTAAAGAGACAGCAAGAGCT+AGG + chr3_2:64748124-64748143 Msa0417530:intron 40.0%
TAAAGAGACAGCAAGAGCTA+GGG + chr3_2:64748125-64748144 Msa0417530:intron 40.0%
AAGTGGGAAGATTTGGCATT+TGG + chr3_2:64748182-64748201 Msa0417530:intron 40.0%
TCTGAAGACAGACAGTTAGA+TGG + chr3_2:64748268-64748287 Msa0417530:intron 40.0%
CTGAAGACAGACAGTTAGAT+GGG + chr3_2:64748269-64748288 Msa0417530:intron 40.0%
GAAACAGCCAAGCTTATGTT+TGG + chr3_2:64748291-64748310 Msa0417530:intron 40.0%
ATGGGCCAAGTCCAAATTTA+TGG + chr3_2:64748319-64748338 Msa0417530:intron 40.0%
TGTTAAGACTTCAGAGTGGT+TGG + chr3_2:64748539-64748558 Msa0417530:intron 40.0%
TCTGTCTTGAATACGAACCA+AGG - chr3_2:64748794-64748813 None:intergenic 40.0%
GTCACCTAAGAACTTCAAAG+AGG + chr3_2:64748933-64748952 Msa0417530:intron 40.0%
!! TCTCCCTCTTTGAAGTTCTT+AGG - chr3_2:64748940-64748959 None:intergenic 40.0%
GTTAATTTCCGATATAGGGG+TGG + chr3_2:64749352-64749371 Msa0417530:intron 40.0%
!! TTTGTGCTGATTGGTTGTCA+AGG + chr3_2:64749520-64749539 Msa0417530:intron 40.0%
CTTAAACGTCGGATACAGTA+AGG - chr3_2:64749563-64749582 None:intergenic 40.0%
ATTACAAGACATGGTTGCAC+AGG + chr3_2:64749642-64749661 Msa0417530:CDS 40.0%
ATGCGGTAACAATTCAGGTA+TGG + chr3_2:64750017-64750036 Msa0417530:intron 40.0%
ATTACCTATTACCATCAGGG+TGG - chr3_2:64750389-64750408 None:intergenic 40.0%
ACCCTGATGGTAATAGGTAA+TGG + chr3_2:64750388-64750407 Msa0417530:intron 40.0%
! TCATTTGTAAAGGAGTGTGG+TGG + chr3_2:64750978-64750997 Msa0417530:three_prime_UTR 40.0%
! GAAACGAACGACTAGCTAAG+TGG - chr3_2:64742937-64742956 None:intergenic 45.0%
!! TATGTGGTTTGGTTATGCGG+TGG - chr3_2:64743289-64743308 None:intergenic 45.0%
! TGATGGGGTATTTGTAGGAG+TGG + chr3_2:64743383-64743402 Msa0417530:intron 45.0%
! GATGGGGTATTTGTAGGAGT+GGG + chr3_2:64743384-64743403 Msa0417530:intron 45.0%
TGCGATTCTCACTCTTCTTC+TGG + chr3_2:64743722-64743741 Msa0417530:intron 45.0%
! CACCTCTTTTGCGATTCCTA+AGG + chr3_2:64743767-64743786 Msa0417530:intron 45.0%
! GGTTAGCCGAACCATAACTT+TGG + chr3_2:64744281-64744300 Msa0417530:intron 45.0%
TCCGAACCATTTCGACACTT+CGG + chr3_2:64744349-64744368 Msa0417530:intron 45.0%
!! ACCGAAGTGTCGAAATGGTT+CGG - chr3_2:64744353-64744372 None:intergenic 45.0%
!! ACAGAACCGAAGTGTCGAAA+TGG - chr3_2:64744358-64744377 None:intergenic 45.0%
TTCGACACTTCGGTTCTGTT+CGG + chr3_2:64744359-64744378 Msa0417530:intron 45.0%
CGGTCGGATATTCTATCCAA+TGG - chr3_2:64744468-64744487 None:intergenic 45.0%
TGGATAGAATATCCGACCGA+TGG + chr3_2:64744469-64744488 Msa0417530:intron 45.0%
GAAAGACACAATCCATCGGT+CGG - chr3_2:64744484-64744503 None:intergenic 45.0%
CCGAGTACTTACTTCACACA+TGG + chr3_2:64744790-64744809 Msa0417530:intron 45.0%
! AGGAGGAGTAAAAGGCATGA+AGG + chr3_2:64744855-64744874 Msa0417530:intron 45.0%
! GGAGGAGTAAAAGGCATGAA+GGG + chr3_2:64744856-64744875 Msa0417530:intron 45.0%
CGTCAATAATACTGAGACGG+AGG + chr3_2:64744959-64744978 Msa0417530:intron 45.0%
CAACAGAGTCCAAGTGGAAA+AGG - chr3_2:64745041-64745060 None:intergenic 45.0%
! CTTTTCCACTTGGACTCTGT+TGG + chr3_2:64745039-64745058 Msa0417530:intron 45.0%
GTTAGACAATACACACGGGA+AGG + chr3_2:64745100-64745119 Msa0417530:CDS 45.0%
AATACACACGGGAAGGTTGA+TGG + chr3_2:64745107-64745126 Msa0417530:CDS 45.0%
! CGTTGTTATTAGCCACCACA+AGG + chr3_2:64745157-64745176 Msa0417530:CDS 45.0%
TGTTATTAGCCACCACAAGG+AGG + chr3_2:64745160-64745179 Msa0417530:CDS 45.0%
GTTATTAGCCACCACAAGGA+GGG + chr3_2:64745161-64745180 Msa0417530:CDS 45.0%
GTAGTTGTAAACCCTCCTTG+TGG - chr3_2:64745175-64745194 None:intergenic 45.0%
TATACACTCATGGCATCCTC+AGG + chr3_2:64745207-64745226 Msa0417530:CDS 45.0%
ACAGGTTACGATCTAACCTG+AGG - chr3_2:64745226-64745245 None:intergenic 45.0%
!! AGGGAGCTTGAGAGTGTTAT+TGG - chr3_2:64745508-64745527 None:intergenic 45.0%
GAGAAGCCTGCCAAATTGAT+TGG - chr3_2:64745631-64745650 None:intergenic 45.0%
! CAGCAACTTTTGTGAGCTTC+CGG + chr3_2:64745891-64745910 Msa0417530:intron 45.0%
! AACTTTTGTGAGCTTCCGGT+TGG + chr3_2:64745895-64745914 Msa0417530:CDS 45.0%
CCAACACATACTGTACCAAC+CGG - chr3_2:64745913-64745932 None:intergenic 45.0%
GATATCCAGAACAAGGGAAG+AGG + chr3_2:64745934-64745953 Msa0417530:CDS 45.0%
TCAAACCTCTTCCCTTGTTC+TGG - chr3_2:64745942-64745961 None:intergenic 45.0%
ATGCATTCTTTGACCGACCT+GGG - chr3_2:64746048-64746067 None:intergenic 45.0%
AGGTCGGTCAAAGAATGCAT+GGG + chr3_2:64746048-64746067 Msa0417530:intron 45.0%
AATGCATGGGAGTCTCCATT+AGG + chr3_2:64746061-64746080 Msa0417530:CDS 45.0%
TGTTTCCTTGGCTATCACAG+AGG + chr3_2:64746150-64746169 Msa0417530:CDS 45.0%
TCCTAGTCTCCCAGTGAATT+TGG + chr3_2:64746231-64746250 Msa0417530:intron 45.0%
ACCAAATTCACTGGGAGACT+AGG - chr3_2:64746235-64746254 None:intergenic 45.0%
GTCTCCCAGTGAATTTGGTT+AGG + chr3_2:64746236-64746255 Msa0417530:intron 45.0%
AGGGATTTATAATAGGGCCC+AGG + chr3_2:64747250-64747269 Msa0417530:intron 45.0%
ACTTGGCATAGGGGAAATAG+AGG - chr3_2:64747339-64747358 None:intergenic 45.0%
GACTTAGAGGGTGAGACATA+TGG + chr3_2:64747413-64747432 Msa0417530:intron 45.0%
CCTCCTCAGTCATAACAACT+AGG - chr3_2:64747512-64747531 None:intergenic 45.0%
CCTAGTTGTTATGACTGAGG+AGG + chr3_2:64747509-64747528 Msa0417530:intron 45.0%
CCAACCAATCCCTATAAGGT+TGG - chr3_2:64747679-64747698 None:intergenic 45.0%
! CCAACCTTATAGGGATTGGT+TGG + chr3_2:64747676-64747695 Msa0417530:intron 45.0%
ATAAATGGGGGGAATGTAGG+GGG + chr3_2:64747703-64747722 Msa0417530:intron 45.0%
CCTGCCAGATATCTTATTGG+GGG + chr3_2:64747907-64747926 Msa0417530:intron 45.0%
GGAAGAAAGGGAGAACTTCA+GGG + chr3_2:64747928-64747947 Msa0417530:intron 45.0%
CAACTTGCAACCTCTGTTGA+GGG + chr3_2:64747983-64748002 Msa0417530:intron 45.0%
TTCAGTACCACGGTAATGAG+GGG + chr3_2:64748055-64748074 Msa0417530:intron 45.0%
TAGGGATGAAGTGGAAAGAC+TGG + chr3_2:64748143-64748162 Msa0417530:intron 45.0%
AGGGATGAAGTGGAAAGACT+GGG + chr3_2:64748144-64748163 Msa0417530:intron 45.0%
! GACTAGCCCAAAAGCAAAGT+GGG + chr3_2:64748166-64748185 Msa0417530:intron 45.0%
!! CATAATGGGCCAGACACAAA+CGG + chr3_2:64748230-64748249 Msa0417530:intron 45.0%
!! ATAATGGGCCAGACACAAAC+GGG + chr3_2:64748231-64748250 Msa0417530:intron 45.0%
GGGGGAGAAGAATCATTAAG+TGG + chr3_2:64748596-64748615 Msa0417530:intron 45.0%
GGGCTCTTAACAATGTTCGT+AGG + chr3_2:64748739-64748758 Msa0417530:intron 45.0%
AGAACTTCAAAGAGGGAGAG+AGG + chr3_2:64748941-64748960 Msa0417530:intron 45.0%
GAACTTCAAAGAGGGAGAGA+GGG + chr3_2:64748942-64748961 Msa0417530:intron 45.0%
AACTTCAAAGAGGGAGAGAG+GGG + chr3_2:64748943-64748962 Msa0417530:intron 45.0%
TGCAGGATTTCAAACCCTAG+AGG + chr3_2:64749613-64749632 Msa0417530:intron 45.0%
GGACAAAGTAGTCGAACATG+CGG + chr3_2:64750000-64750019 Msa0417530:CDS 45.0%
CGAACATGCGGTAACAATTC+AGG + chr3_2:64750012-64750031 Msa0417530:CDS 45.0%
TTTGTAGGGTTTGACGTCCT+CGG + chr3_2:64750320-64750339 Msa0417530:intron 45.0%
! TCGGGATATTTGTTGGCAGT+CGG + chr3_2:64750339-64750358 Msa0417530:CDS 45.0%
TACACAGCTCATGTCACAAG+AGG + chr3_2:64750703-64750722 Msa0417530:three_prime_UTR 45.0%
!!! CGTTTTTTCCTTGTCTGGTC+AGG + chr3_2:64750869-64750888 Msa0417530:three_prime_UTR 45.0%
ATATGTTGCCTGACCAGACA+AGG - chr3_2:64750880-64750899 None:intergenic 45.0%
TGTCTGCAGACCAACGTTTG+CGG - chr3_2:64743328-64743347 None:intergenic 50.0%
!!! GGTTTTGGTTCGGTTCGGTT+CGG + chr3_2:64744241-64744260 Msa0417530:intron 50.0%
! AAAGGCATGAAGGGCAGAGT+TGG + chr3_2:64744865-64744884 Msa0417530:intron 50.0%
GTTGTAAACCCTCCTTGTGG+TGG - chr3_2:64745172-64745191 None:intergenic 50.0%
! CCGGTTGGTACAGTATGTGT+TGG + chr3_2:64745910-64745929 Msa0417530:CDS 50.0%
! CTCTGAGAGCTTAAACTCCC+AGG + chr3_2:64746028-64746047 Msa0417530:intron 50.0%
GAGAGCTTAAACTCCCAGGT+CGG + chr3_2:64746032-64746051 Msa0417530:intron 50.0%
CATGCATTCTTTGACCGACC+TGG - chr3_2:64746049-64746068 None:intergenic 50.0%
CAGGTCGGTCAAAGAATGCA+TGG + chr3_2:64746047-64746066 Msa0417530:intron 50.0%
CTCTGCAAATGGAGGATGGA+CGG + chr3_2:64746104-64746123 Msa0417530:CDS 50.0%
TCTGCAAATGGAGGATGGAC+GGG + chr3_2:64746105-64746124 Msa0417530:CDS 50.0%
GATTGCCTCTGTGATAGCCA+AGG - chr3_2:64746158-64746177 None:intergenic 50.0%
GGCTATCACAGAGGCAATCA+AGG + chr3_2:64746159-64746178 Msa0417530:CDS 50.0%
! ACCTTTTGGTCGCACAGACA+AGG + chr3_2:64747441-64747460 Msa0417530:intron 50.0%
TCCTTGTCTGTGCGACCAAA+AGG - chr3_2:64747445-64747464 None:intergenic 50.0%
ACAGACAAGGACCTGCATAC+TGG + chr3_2:64747454-64747473 Msa0417530:intron 50.0%
CAGACAAGGACCTGCATACT+GGG + chr3_2:64747455-64747474 Msa0417530:intron 50.0%
AGAGCGGAGTGATAAGGAGA+GGG - chr3_2:64747630-64747649 None:intergenic 50.0%
AAGAGCGGAGTGATAAGGAG+AGG - chr3_2:64747631-64747650 None:intergenic 50.0%
GGAGTGGGAGAGTTAAAGAG+CGG - chr3_2:64747646-64747665 None:intergenic 50.0%
CCAATCCCTATAAGGTTGGC+TGG - chr3_2:64747675-64747694 None:intergenic 50.0%
CCAGCCAACCTTATAGGGAT+TGG + chr3_2:64747672-64747691 Msa0417530:intron 50.0%
TAAATGGGGGGAATGTAGGG+GGG + chr3_2:64747704-64747723 Msa0417530:intron 50.0%
! GGCAGGTTGGACCAATTGTT+GGG - chr3_2:64747893-64747912 None:intergenic 50.0%
! TGGCAGGTTGGACCAATTGT+TGG - chr3_2:64747894-64747913 None:intergenic 50.0%
CCCCCAATAAGATATCTGGC+AGG - chr3_2:64747910-64747929 None:intergenic 50.0%
GGGAAGAAAGGGAGAACTTC+AGG + chr3_2:64747927-64747946 Msa0417530:intron 50.0%
GCAACTTGCAACCTCTGTTG+AGG + chr3_2:64747982-64748001 Msa0417530:intron 50.0%
CTCTGTTGAGGGAGCTGAAA+GGG + chr3_2:64747994-64748013 Msa0417530:intron 50.0%
TCTGTTGAGGGAGCTGAAAG+GGG + chr3_2:64747995-64748014 Msa0417530:intron 50.0%
TAACAACCGCAGTGCTCGTA+TGG + chr3_2:64748022-64748041 Msa0417530:intron 50.0%
CATCTTACCCCTCATTACCG+TGG - chr3_2:64748065-64748084 None:intergenic 50.0%
AGCAAGAGCTAGGGATGAAG+TGG + chr3_2:64748134-64748153 Msa0417530:intron 50.0%
!! GGACTAGCCCAAAAGCAAAG+TGG + chr3_2:64748165-64748184 Msa0417530:intron 50.0%
ATGACAGACCCGTTTGTGTC+TGG - chr3_2:64748242-64748261 None:intergenic 50.0%
GACACAAACGGGTCTGTCAT+TGG + chr3_2:64748242-64748261 Msa0417530:intron 50.0%
TGACTGAGAATAGGAGAGCG+AGG - chr3_2:64748668-64748687 None:intergenic 50.0%
TGCACAGGCTTTCTGTACCT+TGG + chr3_2:64748774-64748793 Msa0417530:intron 50.0%
CACATTGGCCACCCCTATAT+CGG - chr3_2:64749363-64749382 None:intergenic 50.0%
TTGTAGGGTTTGACGTCCTC+GGG + chr3_2:64750321-64750340 Msa0417530:intron 50.0%
GACGTCCTCGGGATATTTGT+TGG + chr3_2:64750332-64750351 Msa0417530:CDS 50.0%
GACTGCCAACAAATATCCCG+AGG - chr3_2:64750340-64750359 None:intergenic 50.0%
AGCTCCACCCTGATGGTAAT+AGG + chr3_2:64750382-64750401 Msa0417530:CDS 50.0%
!! GCTTTGGAACCCGCAAACGT+TGG + chr3_2:64743315-64743334 Msa0417530:intron 55.0%
GTCTGCAGACCAACGTTTGC+GGG - chr3_2:64743327-64743346 None:intergenic 55.0%
! GCAAACGTTGGTCTGCAGAC+AGG + chr3_2:64743327-64743346 Msa0417530:intron 55.0%
TCTGCAGACAGGACAGGACA+GGG + chr3_2:64743338-64743357 Msa0417530:intron 55.0%
CACTTCGGTTCTGTTCGGTC+TGG + chr3_2:64744364-64744383 Msa0417530:intron 55.0%
CAAATACCTAGGGGTGGGCA+TGG - chr3_2:64744408-64744427 None:intergenic 55.0%
CATCAATGCACGGCAATCCC+TGG - chr3_2:64746741-64746760 None:intergenic 55.0%
AAATGGGGGGAATGTAGGGG+GGG + chr3_2:64747705-64747724 Msa0417530:intron 55.0%
CCTTTCAGCTCCCTCAACAG+AGG - chr3_2:64747996-64748015 None:intergenic 55.0%
CCTCTGTTGAGGGAGCTGAA+AGG + chr3_2:64747993-64748012 Msa0417530:intron 55.0%
! AGGAGCATAGTGCACTGCAC+AGG + chr3_2:64748759-64748778 Msa0417530:intron 55.0%
CAGGGTGGAGCTCACACATT+TGG - chr3_2:64750374-64750393 None:intergenic 55.0%
ATGTGTGAGCTCCACCCTGA+TGG + chr3_2:64750375-64750394 Msa0417530:CDS 55.0%
! CGTTGGTCTGCAGACAGGAC+AGG + chr3_2:64743332-64743351 Msa0417530:intron 60.0%
GTCTGCAGACAGGACAGGAC+AGG + chr3_2:64743337-64743356 Msa0417530:intron 60.0%
ACCTAGGGGTGGGCATGGTT+CGG - chr3_2:64744403-64744422 None:intergenic 60.0%
AATGGGGGGAATGTAGGGGG+GGG + chr3_2:64747706-64747725 Msa0417530:intron 60.0%
CAACCGCAGTGCTCGTATGG+TGG + chr3_2:64748025-64748044 Msa0417530:intron 60.0%
! CAGCCACCATACGAGCACTG+CGG - chr3_2:64748031-64748050 None:intergenic 60.0%
ACCGAACCATGCCCACCCCT+AGG + chr3_2:64744399-64744418 Msa0417530:intron 65.0%
TGTTGGGGGCGGATGACCCG+AGG - chr3_2:64742703-64742722 Msa0417520:five_prime_UTR 70.0%
GGGGGAATGTAGGGGGGGGA+AGG + chr3_2:64747710-64747729 Msa0417530:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 64742672 64751012 64742672 ID=Msa0417530;Name=Msa0417530
chr3_2 mRNA 64742672 64751012 64742672 ID=Msa0417530-mRNA-1;Parent=Msa0417530;Name=Msa0417530-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.9|0.72|1|0.8|0.81|11|317|425
chr3_2 exon 64742672 64742793 64742672 ID=Msa0417530-mRNA-1:exon:14404;Parent=Msa0417530-mRNA-1
chr3_2 exon 64745100 64745228 64745100 ID=Msa0417530-mRNA-1:exon:14405;Parent=Msa0417530-mRNA-1
chr3_2 exon 64745389 64745694 64745389 ID=Msa0417530-mRNA-1:exon:14406;Parent=Msa0417530-mRNA-1
chr3_2 exon 64745894 64745955 64745894 ID=Msa0417530-mRNA-1:exon:14407;Parent=Msa0417530-mRNA-1
chr3_2 exon 64746050 64746198 64746050 ID=Msa0417530-mRNA-1:exon:14408;Parent=Msa0417530-mRNA-1
chr3_2 exon 64746742 64746862 64746742 ID=Msa0417530-mRNA-1:exon:14409;Parent=Msa0417530-mRNA-1
chr3_2 exon 64747035 64747190 64747035 ID=Msa0417530-mRNA-1:exon:14410;Parent=Msa0417530-mRNA-1
chr3_2 exon 64749618 64749663 64749618 ID=Msa0417530-mRNA-1:exon:14411;Parent=Msa0417530-mRNA-1
chr3_2 exon 64749967 64750033 64749967 ID=Msa0417530-mRNA-1:exon:14412;Parent=Msa0417530-mRNA-1
chr3_2 exon 64750327 64750403 64750327 ID=Msa0417530-mRNA-1:exon:14413;Parent=Msa0417530-mRNA-1
chr3_2 exon 64750653 64751012 64750653 ID=Msa0417530-mRNA-1:exon:14414;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64742672 64742793 64742672 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64745100 64745228 64745100 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64745389 64745694 64745389 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64745894 64745955 64745894 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64746050 64746198 64746050 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64746742 64746862 64746742 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64747035 64747190 64747035 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64749618 64749663 64749618 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64749967 64750033 64749967 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64750327 64750403 64750327 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 CDS 64750653 64750695 64750653 ID=Msa0417530-mRNA-1:cds;Parent=Msa0417530-mRNA-1
chr3_2 three_prime_UTR 64750696 64751012 64750696 ID=Msa0417530-mRNA-1:three_prime_utr;Parent=Msa0417530-mRNA-1
Gene Sequence

>Msa0417530

ATGATACCCAAACTCATATTCTGCTTAACCTCGGGTCATCCGCCCCCAACATATAAATTTTCAGTATTCCCTTTCTCTGCGATTTTCTTCAAGGGCCTCTGTTCTTCAATTCACAACGTCAGGTTAGACAATACACACGGGAAGGTTGATGGTATTACTGAACTCTGCGTCAACAGCATCGTTGTTATTAGCCACCACAAGGAGGGTTTACAACTACCATCTTTCAACATATACACTCATGGCATCCTCAGTTTGAATCTTGATGATGAAATATCTATTCCTCTATTTTTATCAGTTGTGGATTGCAGTTTGTTGGTTCTATGTGGCAAATCACTCGCAGAGAATGAAACTGCTATAGCTATTAAGACCAATAACACTCTCAAGCTCCCTGACAAGAAAGAACTATCCATTATTTTACATTCAGAGTTCAATAAAAGTGTTATACAACGACAATCCTTCCAATTTAGTTCATTCATGAATTCTCTTTCTACCAATCAATTTGGCAGGCTTCTCATATGGTCTCCTGAGTTAACTTCGACACATGATGTCGTTTCACACAACTTTTGTGAGCTTCCGGTTGGTACAGTATGTGTTGGTGATATCCAGAACAAGGGAAGAGGTCGGTCAAAGAATGCATGGGAGTCTCCATTAGGTTGCCTGATGTTTTCTTTTACTCTGCAAATGGAGGATGGACGGGTCGTTCCTTTAGTTCAGTATGTTGTTTCCTTGGCTATCACAGAGGCAATCAAGGATATCTGTGACAAAAATGGATTGCCGTGCATTGATGTTAAAATCAAGTGGCCAAATGATCTGTACTTAAACGGATTTAAAGTTGGAGGCATTCTTTGCACCTCTACATATAAATCAAAGAAGTTCAATATCAGTGCAGGAATAGGATTGAATGTCAATAATGAGAAGCCAACAACATCCTTAAATACAGTTCTAAGAGAATTGTCTGTGGGAGCTTACCAATTTCAAAGAGAAGATGTTCTGGCAGCCTTTTTTAACAAATTTGAGAAGTTTTTTGATCTATTTTTGAATCAAGGATTTCAAACCCTAGAGGAACTATATTACAAGACATGGTTGCACAGTGGACAGAGAGTTATTGTACAAGAAAAGAACGAGGACAAAGTAGTCGAACATGCGGTAACAATTCAGGGTTTGACGTCCTCGGGATATTTGTTGGCAGTCGGTGATGACAACCAAATGTGTGAGCTCCACCCTGATGGTAATAGCTTTGACTTTTTCAAAGGACTAGTCAGAAGGAAACTTGAATGA

Protein sequence

>Msa0417530

MIPKLIFCLTSGHPPPTYKFSVFPFSAIFFKGLCSSIHNVRLDNTHGKVDGITELCVNSIVVISHHKEGLQLPSFNIYTHGILSLNLDDEISIPLFLSVVDCSLLVLCGKSLAENETAIAIKTNNTLKLPDKKELSIILHSEFNKSVIQRQSFQFSSFMNSLSTNQFGRLLIWSPELTSTHDVVSHNFCELPVGTVCVGDIQNKGRGRSKNAWESPLGCLMFSFTLQMEDGRVVPLVQYVVSLAITEAIKDICDKNGLPCIDVKIKWPNDLYLNGFKVGGILCTSTYKSKKFNISAGIGLNVNNEKPTTSLNTVLRELSVGAYQFQREDVLAAFFNKFEKFFDLFLNQGFQTLEELYYKTWLHSGQRVIVQEKNEDKVVEHAVTIQGLTSSGYLLAVGDDNQMCELHPDGNSFDFFKGLVRRKLE*