Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237820 | XP_003627574.2 | 99.261 | 541 | 4 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237820 | sp|Q0WMJ8|SIPL4_ARATH | 73.978 | 538 | 134 | 2 | 6 | 537 | 2 | 539 | 0.0 | 834 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa1237820 | 0.827219 | 1.765595e-54 | -8.615850e-47 |
| Msa0672690 | Msa1237820 | 0.810149 | 1.330340e-50 | -8.615850e-47 |
| Msa0701900 | Msa1237820 | 0.801870 | 7.342436e-49 | -8.615850e-47 |
| Msa0769390 | Msa1237820 | 0.814392 | 1.577265e-51 | -8.615850e-47 |
| Msa0789690 | Msa1237820 | 0.824533 | 7.665783e-54 | -8.615850e-47 |
| Msa0832370 | Msa1237820 | 0.833343 | 5.633154e-56 | -8.615850e-47 |
| Msa0136490 | Msa1237820 | 0.824481 | 7.883686e-54 | -8.615850e-47 |
| Msa0137110 | Msa1237820 | 0.807169 | 5.762751e-50 | -8.615850e-47 |
| Msa0157290 | Msa1237820 | 0.828061 | 1.108173e-54 | -8.615850e-47 |
| Msa0214640 | Msa1237820 | -0.802147 | 6.439980e-49 | -8.615850e-47 |
| Msa0215320 | Msa1237820 | -0.827808 | 1.274682e-54 | -8.615850e-47 |
| Msa1237820 | Msa1238930 | 0.826564 | 2.530889e-54 | -8.615850e-47 |
| Msa1237820 | Msa1264020 | 0.800944 | 1.136231e-48 | -8.615850e-47 |
| Msa1237820 | Msa1283860 | 0.811955 | 5.404255e-51 | -8.615850e-47 |
| Msa1237820 | Msa1287130 | 0.800498 | 1.401441e-48 | -8.615850e-47 |
| Msa1237820 | Msa1313150 | 0.806899 | 6.572756e-50 | -8.615850e-47 |
| Msa1237820 | Msa1316050 | 0.816844 | 4.483869e-52 | -8.615850e-47 |
| Msa1237820 | Msa1358960 | 0.806364 | 8.527809e-50 | -8.615850e-47 |
| Msa1237820 | Msa1367080 | 0.828705 | 7.747981e-55 | -8.615850e-47 |
| Msa1237820 | Msa1397510 | 0.827237 | 1.748287e-54 | -8.615850e-47 |
| Msa1237820 | Msa1407640 | -0.827645 | 1.395542e-54 | -8.615850e-47 |
| Msa1237820 | Msa1423880 | 0.825216 | 5.290791e-54 | -8.615850e-47 |
| Msa1237820 | Msa1457240 | 0.844148 | 9.046087e-59 | -8.615850e-47 |
| Msa0388960 | Msa1237820 | 0.810843 | 9.420557e-51 | -8.615850e-47 |
| Msa0392180 | Msa1237820 | 0.825072 | 5.720425e-54 | -8.615850e-47 |
| Msa0396060 | Msa1237820 | 0.806751 | 7.063694e-50 | -8.615850e-47 |
| Msa0417530 | Msa1237820 | 0.815461 | 9.137358e-52 | -8.615850e-47 |
| Msa0466390 | Msa1237820 | 0.807229 | 5.598758e-50 | -8.615850e-47 |
| Msa1044420 | Msa1237820 | 0.809356 | 1.970323e-50 | -8.615850e-47 |
| Msa1075220 | Msa1237820 | -0.802389 | 5.740823e-49 | -8.615850e-47 |
| Msa0320740 | Msa1237820 | 0.801284 | 9.680752e-49 | -8.615850e-47 |
| Msa1121450 | Msa1237820 | -0.823939 | 1.057093e-53 | -8.615850e-47 |
| Msa1162550 | Msa1237820 | -0.802741 | 4.857169e-49 | -8.615850e-47 |
| Msa1222970 | Msa1237820 | 0.836291 | 1.020052e-56 | -8.615850e-47 |
| Msa0581760 | Msa1237820 | 0.813902 | 2.023132e-51 | -8.615850e-47 |
| Msa0585230 | Msa1237820 | 0.806955 | 6.396584e-50 | -8.615850e-47 |
| Msa0588230 | Msa1237820 | 0.811979 | 5.337881e-51 | -8.615850e-47 |
| Msa0880140 | Msa1237820 | 0.823101 | 1.660268e-53 | -8.615850e-47 |
| Msa0930390 | Msa1237820 | 0.806417 | 8.308535e-50 | -8.615850e-47 |
| Msa0930830 | Msa1237820 | -0.836566 | 8.681427e-57 | -8.615850e-47 |
| Msa0931520 | Msa1237820 | 0.803925 | 2.761648e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237820 | MtrunA17_Chr8g0348831 | 99.261 | 541 | 4 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1102 |
| Msa1237820 | MtrunA17_Chr7g0247841 | 81.214 | 527 | 97 | 2 | 15 | 540 | 12 | 537 | 0.0 | 886 |
| Msa1237820 | MtrunA17_Chr6g0475601 | 71.236 | 518 | 145 | 3 | 20 | 536 | 23 | 537 | 0.0 | 760 |
| Msa1237820 | MtrunA17_Chr7g0214221 | 50.200 | 500 | 244 | 3 | 25 | 522 | 30 | 526 | 2.53e-173 | 500 |
| Msa1237820 | MtrunA17_Chr1g0213851 | 55.869 | 213 | 94 | 0 | 308 | 520 | 17 | 229 | 1.15e-82 | 257 |
| Msa1237820 | MtrunA17_Chr1g0213841 | 46.018 | 113 | 59 | 1 | 178 | 288 | 6 | 118 | 1.64e-23 | 95.9 |
| Msa1237820 | MtrunA17_Chr1g0203091 | 24.870 | 386 | 206 | 14 | 202 | 538 | 19 | 369 | 1.44e-22 | 99.8 |
| Msa1237820 | MtrunA17_Chr3g0139491 | 31.959 | 194 | 117 | 5 | 348 | 541 | 161 | 339 | 9.37e-21 | 93.6 |
| Msa1237820 | MtrunA17_Chr1g0147151 | 31.500 | 200 | 118 | 6 | 338 | 537 | 156 | 336 | 1.91e-19 | 90.1 |
| Msa1237820 | MtrunA17_Chr1g0213831 | 34.737 | 95 | 62 | 0 | 40 | 134 | 30 | 124 | 9.49e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237820 | AT1G01650.1 | 73.978 | 538 | 134 | 2 | 6 | 537 | 2 | 539 | 0.0 | 834 |
| Msa1237820 | AT1G63690.1 | 74.319 | 514 | 130 | 1 | 23 | 536 | 25 | 536 | 0.0 | 791 |
| Msa1237820 | AT1G63690.2 | 74.125 | 514 | 131 | 1 | 23 | 536 | 25 | 536 | 0.0 | 790 |
| Msa1237820 | AT1G01650.3 | 76.574 | 397 | 92 | 1 | 142 | 537 | 1 | 397 | 0.0 | 635 |
| Msa1237820 | AT1G01650.4 | 76.574 | 397 | 92 | 1 | 142 | 537 | 1 | 397 | 0.0 | 635 |
| Msa1237820 | AT1G01650.2 | 76.574 | 397 | 92 | 1 | 142 | 537 | 1 | 397 | 0.0 | 635 |
| Msa1237820 | AT2G43070.1 | 47.338 | 526 | 272 | 3 | 8 | 530 | 11 | 534 | 6.87e-160 | 466 |
| Msa1237820 | AT2G43070.3 | 47.338 | 526 | 272 | 3 | 8 | 530 | 70 | 593 | 6.35e-159 | 466 |
| Msa1237820 | AT2G43070.2 | 46.992 | 532 | 271 | 4 | 8 | 530 | 11 | 540 | 2.45e-158 | 462 |
| Msa1237820 | AT2G43070.4 | 46.992 | 532 | 271 | 4 | 8 | 530 | 70 | 599 | 1.63e-157 | 462 |
| Msa1237820 | AT1G05820.1 | 44.008 | 509 | 278 | 3 | 31 | 537 | 30 | 533 | 7.37e-145 | 428 |
| Msa1237820 | AT1G05820.2 | 44.842 | 475 | 258 | 2 | 31 | 503 | 30 | 502 | 3.48e-140 | 415 |
| Msa1237820 | AT1G05820.4 | 45.477 | 398 | 210 | 3 | 142 | 537 | 1 | 393 | 4.27e-119 | 357 |
| Msa1237820 | AT1G05820.3 | 40.849 | 377 | 219 | 2 | 31 | 405 | 30 | 404 | 4.76e-91 | 286 |
| Msa1237820 | AT4G33410.1 | 26.074 | 326 | 177 | 11 | 241 | 519 | 47 | 355 | 1.38e-23 | 103 |
| Msa1237820 | AT2G03120.1 | 33.684 | 190 | 111 | 5 | 348 | 537 | 161 | 335 | 3.02e-22 | 98.6 |
Find 146 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTATTAATGTTAATAATT+TGG | 0.124360 | 8_2:+17406004 | None:intergenic |
| ATATGAGGACAATGCCTTTC+TGG | 0.135793 | 8_2:+17400710 | None:intergenic |
| TGTGCTTGCTTCCTGTTTCT+TGG | 0.229721 | 8_2:-17403746 | Msa1237820:CDS |
| CTTTCCTATATGACATCTTA+TGG | 0.233407 | 8_2:-17402908 | Msa1237820:CDS |
| TTATACTTACCAAGTGTAAA+TGG | 0.235488 | 8_2:+17401577 | None:intergenic |
| GTTTGGTGTGTCTTTGGTTT+TGG | 0.248253 | 8_2:-17405773 | Msa1237820:CDS |
| GTTACAGCATCATTGGTTTC+GGG | 0.276829 | 8_2:-17402557 | Msa1237820:CDS |
| TGTACAAATTAATGTCATTC+TGG | 0.277038 | 8_2:-17403717 | Msa1237820:CDS |
| GCTCACCAATGAGATCATTT+TGG | 0.282959 | 8_2:-17404775 | Msa1237820:CDS |
| GGTTACAGCATCATTGGTTT+CGG | 0.284269 | 8_2:-17402558 | Msa1237820:CDS |
| AGAATCAATATTCTAGTTGA+TGG | 0.287318 | 8_2:-17400420 | Msa1237820:three_prime_UTR |
| ACCACGTTTGTTTGATCCTT+GGG | 0.292106 | 8_2:-17402583 | Msa1237820:CDS |
| AGTCAAAATACCTTATTCTT+AGG | 0.296947 | 8_2:+17404933 | None:intergenic |
| ATATGTCGCTTTAAACTTGA+TGG | 0.299572 | 8_2:-17401635 | Msa1237820:CDS |
| CATAGTATTTGCAGTGGTTT+GGG | 0.300952 | 8_2:-17403349 | Msa1237820:CDS |
| GCATAGTATTTGCAGTGGTT+TGG | 0.301464 | 8_2:-17403350 | Msa1237820:CDS |
| AAAGAGGGAAGACTAATAAA+AGG | 0.306553 | 8_2:-17400326 | Msa1237820:three_prime_UTR |
| TTAATGTTACATCACACAAT+AGG | 0.309336 | 8_2:+17400491 | None:intergenic |
| GTTTCTGTTTGGTGTGTCTT+TGG | 0.311149 | 8_2:-17405779 | Msa1237820:CDS |
| TCAAATCATACCTTGAGATT+TGG | 0.314981 | 8_2:+17403142 | None:intergenic |
| TATGTGAAGATACCGTTCTT+TGG | 0.317072 | 8_2:-17403411 | Msa1237820:CDS |
| CCAATAAGAAGCACATAAAA+TGG | 0.329319 | 8_2:+17404118 | None:intergenic |
| ATCAATGTTGGTTAATTGAT+TGG | 0.335483 | 8_2:+17400675 | None:intergenic |
| TGGGGTGGTTACAGCATCAT+TGG | 0.340318 | 8_2:-17402564 | Msa1237820:CDS |
| AGGAAGATAGTGAGAAAGTT+AGG | 0.341575 | 8_2:+17405941 | None:intergenic |
| AATGAAACTGATGTTGATAT+TGG | 0.345185 | 8_2:-17404392 | Msa1237820:CDS |
| AATTCTTAGAATGGTTTCAT+TGG | 0.353819 | 8_2:-17405833 | Msa1237820:exon |
| TTGTGAGAATAACTTTGTTC+TGG | 0.354785 | 8_2:-17405704 | Msa1237820:intron |
| ATTCTGGTTTCTTGAAGTTC+TGG | 0.356705 | 8_2:-17403701 | Msa1237820:CDS |
| TTGTAGCAAGCCTAAGAATA+AGG | 0.358188 | 8_2:-17404943 | Msa1237820:intron |
| GTGCTTCTTATTGGTCTGCT+TGG | 0.367692 | 8_2:-17404109 | Msa1237820:CDS |
| TTCTCACAACCAGGCCTTGT+TGG | 0.370906 | 8_2:+17405718 | None:intergenic |
| TAATGTTACATCACACAATA+GGG | 0.372400 | 8_2:+17400492 | None:intergenic |
| TTTCCTATATGACATCTTAT+GGG | 0.378805 | 8_2:-17402907 | Msa1237820:CDS |
| TACCACGTTTGTTTGATCCT+TGG | 0.389231 | 8_2:-17402584 | Msa1237820:CDS |
| TGGTTAACTTCTTCAATATG+AGG | 0.390926 | 8_2:+17400695 | None:intergenic |
| GTCCATGCTATCAAATCATT+TGG | 0.392210 | 8_2:+17400550 | None:intergenic |
| TATGGGTGTTCGTCTCTAAA+TGG | 0.393668 | 8_2:-17402890 | Msa1237820:CDS |
| TCTTAGCTATTAGTTTATAT+AGG | 0.394896 | 8_2:-17400636 | Msa1237820:three_prime_UTR |
| TTTCGGGGACATAATCTTAC+CGG | 0.395970 | 8_2:-17402541 | Msa1237820:CDS |
| GTAGTATATGTGTTTCTGTT+TGG | 0.400114 | 8_2:-17405790 | Msa1237820:CDS |
| AAGAATCTTAATTCTTAGAA+TGG | 0.401879 | 8_2:-17405842 | Msa1237820:exon |
| GTGTGGGCAATGACTGCTTA+TGG | 0.406868 | 8_2:-17401969 | Msa1237820:CDS |
| TTGCTCAATAGCAGCTTCTC+TGG | 0.407570 | 8_2:+17404082 | None:intergenic |
| ATTCTTAGAATGGTTTCATT+GGG | 0.419905 | 8_2:-17405832 | Msa1237820:exon |
| TTAGGCTTGCTACAACAATC+AGG | 0.422579 | 8_2:+17404951 | None:intergenic |
| TTCATCAGCTATATTTGCCT+TGG | 0.424615 | 8_2:+17404725 | None:intergenic |
| CATGACAACTCTAGTATGAT+TGG | 0.435387 | 8_2:+17404983 | None:intergenic |
| CCACACCATCAATCCAAGTT+GGG | 0.441766 | 8_2:+17405072 | None:intergenic |
| AAAGTCCCAACTTGGATTGA+TGG | 0.441839 | 8_2:-17405077 | Msa1237820:CDS |
| ACAAGATGCTGGATTAAACT+TGG | 0.448478 | 8_2:-17404348 | Msa1237820:CDS |
| GTTGGTGTCGGTGCAAGATT+CGG | 0.451181 | 8_2:-17405035 | Msa1237820:CDS |
| GTACAGCATAACCAAGAAAC+AGG | 0.452241 | 8_2:+17403735 | None:intergenic |
| CTCATTATAAATTATCGTAC+AGG | 0.453906 | 8_2:-17404684 | Msa1237820:intron |
| ATCTTCACATATGTTTGTGC+AGG | 0.456906 | 8_2:+17403423 | None:intergenic |
| GCAATGACTGCTTATGGTCT+AGG | 0.461735 | 8_2:-17401963 | Msa1237820:intron |
| GTTATGCTTCCACAAGATGC+TGG | 0.462553 | 8_2:-17404359 | Msa1237820:CDS |
| ATACTCTCCACTTCGTCCAT+TGG | 0.465650 | 8_2:-17404183 | Msa1237820:CDS |
| TAAGGGTCTACAAACTTGTC+TGG | 0.469680 | 8_2:-17403569 | Msa1237820:intron |
| GTTAGGTCAAAGTCCCAACT+TGG | 0.470294 | 8_2:-17405085 | Msa1237820:intron |
| CTGGTTTCTTGAAGTTCTGG+TGG | 0.471891 | 8_2:-17403698 | Msa1237820:CDS |
| TTTCTCTGTACAGGTAGCTC+GGG | 0.478408 | 8_2:-17402649 | Msa1237820:intron |
| CCACTATCATCACGCTCTCA+TGG | 0.480266 | 8_2:+17402862 | None:intergenic |
| GTAACAGCAAGTGTCAGATA+TGG | 0.481241 | 8_2:+17403381 | None:intergenic |
| TTTGTTTGGAGAGAAAATAA+AGG | 0.482312 | 8_2:+17405921 | None:intergenic |
| TATACTTACCAAGTGTAAAT+GGG | 0.486632 | 8_2:+17401578 | None:intergenic |
| TCCACACCATCAATCCAAGT+TGG | 0.493462 | 8_2:+17405071 | None:intergenic |
| GTGCACCAAAATGATCTCAT+TGG | 0.493592 | 8_2:+17404770 | None:intergenic |
| TGTCTGTACTATTGATTCAA+AGG | 0.502391 | 8_2:+17400121 | None:intergenic |
| CTATATAGAGCAAAGCTGGC+TGG | 0.507003 | 8_2:+17401602 | None:intergenic |
| ACGATAATTTATAATGAGAA+TGG | 0.509940 | 8_2:+17404689 | None:intergenic |
| AAAGTTGTTGTAGTTTCAGA+TGG | 0.512418 | 8_2:-17403455 | Msa1237820:intron |
| AATGAGAATGGCTGAAGCAC+CGG | 0.516902 | 8_2:+17404701 | None:intergenic |
| GTCTGGCGGCTCTATTATCA+TGG | 0.517009 | 8_2:-17403552 | Msa1237820:intron |
| ACACCCATAAGATGTCATAT+AGG | 0.520311 | 8_2:+17402904 | None:intergenic |
| CCATGAGAGCGTGATGATAG+TGG | 0.524478 | 8_2:-17402862 | Msa1237820:intron |
| GCAAAGAAGAACCTCCGAGC+TGG | 0.526351 | 8_2:-17401999 | Msa1237820:CDS |
| GGGACTATATAGAGCAAAGC+TGG | 0.526557 | 8_2:+17401598 | None:intergenic |
| AAGTTTAATCCAGCATCTTG+TGG | 0.531321 | 8_2:+17404350 | None:intergenic |
| TTAGGAGAAGGAAGTGACGG+TGG | 0.531370 | 8_2:+17405959 | None:intergenic |
| GTCGCTTTAAACTTGATGGA+TGG | 0.538119 | 8_2:-17401631 | Msa1237820:CDS |
| CTTCTGAGATAGCAAGTTGG+AGG | 0.542806 | 8_2:-17400458 | Msa1237820:three_prime_UTR |
| AAGTTAGGAGAAGGAAGTGA+CGG | 0.543039 | 8_2:+17405956 | None:intergenic |
| GAAAATGCTACTACAAGTCC+CGG | 0.543526 | 8_2:+17402522 | None:intergenic |
| AAGTGGAGAGTATAACTGTA+TGG | 0.543946 | 8_2:+17404193 | None:intergenic |
| CAAGCATCATATGCATGGAT+TGG | 0.544368 | 8_2:-17403315 | Msa1237820:CDS |
| CGTGGTAACTTGAGAAGCAT+GGG | 0.546674 | 8_2:+17402600 | None:intergenic |
| GGAGAGTGATAGCAACCGTT+AGG | 0.548518 | 8_2:-17400615 | Msa1237820:three_prime_UTR |
| TTTGTACTATGTAGGAATGA+GGG | 0.548793 | 8_2:+17406051 | None:intergenic |
| ATAGTGAGAAAGTTAGGAGA+AGG | 0.550693 | 8_2:+17405947 | None:intergenic |
| GATGTTGCTCCAACAAGGCC+TGG | 0.550767 | 8_2:-17405727 | Msa1237820:CDS |
| CACTGCAAATACTATGCAGA+AGG | 0.550804 | 8_2:+17403356 | None:intergenic |
| TTATGAAGAAGAACAAAAGA+AGG | 0.558660 | 8_2:+17405876 | None:intergenic |
| TTGTCATTGGGAAAGAAGAG+AGG | 0.559577 | 8_2:-17400764 | Msa1237820:CDS |
| CACAGACGAAGATTCAAAAG+AGG | 0.559814 | 8_2:-17400342 | Msa1237820:three_prime_UTR |
| AACGACAAGCATCATATGCA+TGG | 0.564749 | 8_2:-17403320 | Msa1237820:CDS |
| ACGTGGTAACTTGAGAAGCA+TGG | 0.564772 | 8_2:+17402599 | None:intergenic |
| GTTTGTACTATGTAGGAATG+AGG | 0.566585 | 8_2:+17406050 | None:intergenic |
| TTCGGGGACATAATCTTACC+GGG | 0.571328 | 8_2:-17402540 | Msa1237820:CDS |
| TGCAAGATTCGGTCCTACGT+TGG | 0.574301 | 8_2:-17405024 | Msa1237820:CDS |
| GCAAATATAGCTGATGAAGC+CGG | 0.576888 | 8_2:-17404720 | Msa1237820:CDS |
| CTTCTTCTGAGATAGCAAGT+TGG | 0.578048 | 8_2:-17400461 | Msa1237820:three_prime_UTR |
| CCACGTTTGTTTGATCCTTG+GGG | 0.578234 | 8_2:-17402582 | Msa1237820:CDS |
| CAATCATACTAGAGTTGTCA+TGG | 0.579681 | 8_2:-17404982 | Msa1237820:CDS |
| GCAGAAAGTGTTGGTTCTCG+TGG | 0.579848 | 8_2:-17403808 | Msa1237820:CDS |
| CCCAACTTGGATTGATGGTG+TGG | 0.588257 | 8_2:-17405072 | Msa1237820:CDS |
| TGTTGGTTCTCGTGGTTACG+TGG | 0.588787 | 8_2:-17403800 | Msa1237820:CDS |
| TATATAGTCCCATTTACACT+TGG | 0.589134 | 8_2:-17401586 | Msa1237820:intron |
| GGACAAGAGGAGAACCAGAA+AGG | 0.592548 | 8_2:-17400724 | Msa1237820:CDS |
| CTTCTGCATAGTATTTGCAG+TGG | 0.594852 | 8_2:-17403355 | Msa1237820:CDS |
| TCCGAGCTGGATACTTCGTG+TGG | 0.595477 | 8_2:-17401986 | Msa1237820:CDS |
| AATCTGCTGAAGATCAATGT+TGG | 0.596723 | 8_2:+17400663 | None:intergenic |
| CGTTTGTTTGATCCTTGGGG+TGG | 0.597198 | 8_2:-17402579 | Msa1237820:CDS |
| AGCCAAATGATTTGATAGCA+TGG | 0.603795 | 8_2:-17400552 | Msa1237820:three_prime_UTR |
| AGAAGACTCTCATGGAAGCA+AGG | 0.604334 | 8_2:+17400397 | None:intergenic |
| TCTTGTGGAAGCATAACAGC+AGG | 0.606664 | 8_2:+17404365 | None:intergenic |
| TTACAGCATCATTGGTTTCG+GGG | 0.610146 | 8_2:-17402556 | Msa1237820:CDS |
| GGGTGTTCGTCTCTAAATGG+TGG | 0.611855 | 8_2:-17402887 | Msa1237820:CDS |
| TGTTCGCATACCAAATCTCA+AGG | 0.612517 | 8_2:-17403152 | Msa1237820:intron |
| AGTATTTGCAGTGGTTTGGG+CGG | 0.612976 | 8_2:-17403346 | Msa1237820:CDS |
| AGCAAGTGTCAGATATGGAA+CGG | 0.613995 | 8_2:+17403386 | None:intergenic |
| GAATATGTTGCAGAAAGTGT+TGG | 0.615196 | 8_2:-17403817 | Msa1237820:CDS |
| ACAGACGAAGATTCAAAAGA+GGG | 0.616458 | 8_2:-17400341 | Msa1237820:three_prime_UTR |
| ACATCAACCAATGGACGAAG+TGG | 0.617248 | 8_2:+17404176 | None:intergenic |
| ACATATACACAATGTCCTAA+CGG | 0.618294 | 8_2:+17400600 | None:intergenic |
| ATGATGATGTTGCTCCAACA+AGG | 0.618511 | 8_2:-17405732 | Msa1237820:CDS |
| TATGGAACGGCTCCAAAGAA+CGG | 0.619684 | 8_2:+17403399 | None:intergenic |
| AAAATGTAGTTTCACAACCA+AGG | 0.628218 | 8_2:-17404742 | Msa1237820:CDS |
| TTCTCTGTACAGGTAGCTCG+GGG | 0.629906 | 8_2:-17402648 | Msa1237820:intron |
| AACGCTGAATATGTTGGTGT+CGG | 0.629918 | 8_2:-17405047 | Msa1237820:CDS |
| CACATACAAAATAACTCCAT+AGG | 0.631134 | 8_2:-17404320 | Msa1237820:intron |
| GGTGATAAGAGTGGAGAAGA+CGG | 0.633523 | 8_2:-17402627 | Msa1237820:CDS |
| ACTTCTGCAACATCAACCAA+TGG | 0.636639 | 8_2:+17404167 | None:intergenic |
| CCCACACGAAGTATCCAGCT+CGG | 0.639630 | 8_2:+17401985 | None:intergenic |
| TTAAACTTGATGGATGGACA+TGG | 0.640581 | 8_2:-17401625 | Msa1237820:CDS |
| GTAGCTCGGGGTGATAAGAG+TGG | 0.642633 | 8_2:-17402636 | Msa1237820:CDS |
| TTAAAGCGACATATGTGATG+AGG | 0.646719 | 8_2:+17401644 | None:intergenic |
| GTGGAAAACGCTGAATATGT+TGG | 0.652967 | 8_2:-17405053 | Msa1237820:CDS |
| GGGTCTACAAACTTGTCTGG+CGG | 0.654727 | 8_2:-17403566 | Msa1237820:CDS |
| CCGAGCTGGATACTTCGTGT+GGG | 0.658262 | 8_2:-17401985 | Msa1237820:CDS |
| ACAAAGTTATTCTCACAACC+AGG | 0.666217 | 8_2:+17405709 | None:intergenic |
| ACTGCAAATACTATGCAGAA+GGG | 0.683125 | 8_2:+17403357 | None:intergenic |
| CCCCAAGGATCAAACAAACG+TGG | 0.683397 | 8_2:+17402582 | None:intergenic |
| GGCTTGCTACAACAATCAGG+AGG | 0.689982 | 8_2:+17404954 | None:intergenic |
| ATGATGCTGTAACCACCCCA+AGG | 0.696121 | 8_2:+17402567 | None:intergenic |
| ACACGAAGTATCCAGCTCGG+AGG | 0.740591 | 8_2:+17401988 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTATTAATGTTAATAATT+TGG | + | chr8_2:17400186-17400205 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTATATTTGTT+TGG | + | chr8_2:17400283-17400302 | None:intergenic | 10.0% |
| !! | TATATGAAGAATAAAAAATT+TGG | + | chr8_2:17400511-17400530 | None:intergenic | 10.0% |
| !!! | AAAAATCATTTTTTTAATTG+AGG | - | chr8_2:17400636-17400655 | Msa1237820:three_prime_UTR | 10.0% |
| !!! | AATTCTTTTATAATTGTTTT+TGG | - | chr8_2:17400688-17400707 | Msa1237820:CDS | 10.0% |
| !!! | ATAAAATTATTCATCATTTT+TGG | + | chr8_2:17401639-17401658 | None:intergenic | 10.0% |
| !!! | TGATATATAAATTACTTTTA+TGG | - | chr8_2:17402329-17402348 | Msa1237820:intron | 10.0% |
| !! | TTCAACAAAAATAAAAATAA+GGG | + | chr8_2:17403434-17403453 | None:intergenic | 10.0% |
| !!! | AATTGAATTGACTTATTTAA+TGG | - | chr8_2:17400744-17400763 | Msa1237820:CDS | 15.0% |
| !!! | TGAATATTTAATTTATGCTA+TGG | - | chr8_2:17401706-17401725 | Msa1237820:intron | 15.0% |
| !! | TCAACAAAAATAAAAATAAG+GGG | + | chr8_2:17403433-17403452 | None:intergenic | 15.0% |
| !! | CTTCAACAAAAATAAAAATA+AGG | + | chr8_2:17403435-17403454 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTGTTGAAGAAA+CGG | - | chr8_2:17403438-17403457 | Msa1237820:CDS | 15.0% |
| !! | AAAACTCAATACTAATTATA+AGG | + | chr8_2:17403520-17403539 | None:intergenic | 15.0% |
| !!! | ATGTTTTTTTTATGATAAAG+AGG | - | chr8_2:17403755-17403774 | Msa1237820:CDS | 15.0% |
| !!! | ATATTATAAGCTATTTCAAT+AGG | - | chr8_2:17403966-17403985 | Msa1237820:intron | 15.0% |
| !! | AAGAATCTTAATTCTTAGAA+TGG | - | chr8_2:17400345-17400364 | Msa1237820:three_prime_UTR | 20.0% |
| !! | TTAATTGAGGAAAGAAAAAT+TGG | - | chr8_2:17400649-17400668 | Msa1237820:three_prime_UTR | 20.0% |
| !!! | TTTGAACTTTCTGTTTTTTA+AGG | - | chr8_2:17400718-17400737 | Msa1237820:CDS | 20.0% |
| !!! | TTGAACTTTCTGTTTTTTAA+GGG | - | chr8_2:17400719-17400738 | Msa1237820:CDS | 20.0% |
| !!! | ATCATATCATTTTCAATAAC+AGG | + | chr8_2:17400914-17400933 | None:intergenic | 20.0% |
| !! | ACGATAATTTATAATGAGAA+TGG | + | chr8_2:17401501-17401520 | None:intergenic | 20.0% |
| !! | TAAATATTCAACAGATTGAT+TGG | + | chr8_2:17401696-17401715 | None:intergenic | 20.0% |
| !!! | AGAAAGTGTTTTTTATGTTA+AGG | - | chr8_2:17402265-17402284 | Msa1237820:intron | 20.0% |
| !! | ATGAACATACAAATATTAGA+GGG | + | chr8_2:17402592-17402611 | None:intergenic | 20.0% |
| !! | TATGAACATACAAATATTAG+AGG | + | chr8_2:17402593-17402612 | None:intergenic | 20.0% |
| !! | TCAATTTGGATAGAAATAAT+AGG | + | chr8_2:17402708-17402727 | None:intergenic | 20.0% |
| !! | AAAATGTTACTAAAAGTCTA+GGG | + | chr8_2:17402959-17402978 | None:intergenic | 20.0% |
| !! | GCATTTATAAACAGTTAAAT+CGG | - | chr8_2:17403145-17403164 | Msa1237820:intron | 20.0% |
| !! | AAAAAAACATAAGTAACACA+AGG | + | chr8_2:17403745-17403764 | None:intergenic | 20.0% |
| !!! | TTATTTTGACATTAAAACGT+AGG | + | chr8_2:17404003-17404022 | None:intergenic | 20.0% |
| !!! | TCAATTTTTCTTGTAGTTAT+TGG | - | chr8_2:17404478-17404497 | Msa1237820:intron | 20.0% |
| !! | TTTCAAATTTATGAGTAAGA+TGG | + | chr8_2:17404636-17404655 | None:intergenic | 20.0% |
| !! | CTATTCTTCAATGTATTATT+TGG | - | chr8_2:17404679-17404698 | Msa1237820:intron | 20.0% |
| !! | CTCATTTATTACAAAATAAC+CGG | - | chr8_2:17404895-17404914 | Msa1237820:intron | 20.0% |
| !! | TAAGTTCTTAATTGCATATA+TGG | - | chr8_2:17405141-17405160 | Msa1237820:intron | 20.0% |
| !!! | ACCAATTTACAGTTTTTTTT+CGG | + | chr8_2:17405249-17405268 | None:intergenic | 20.0% |
| !!! | TCTTAGCTATTAGTTTATAT+AGG | - | chr8_2:17405551-17405570 | Msa1237820:intron | 20.0% |
| !!! | TTTTGTTGTTTGTACTATGT+AGG | + | chr8_2:17400147-17400166 | None:intergenic | 25.0% |
| ! | TTTGTTTGGAGAGAAAATAA+AGG | + | chr8_2:17400269-17400288 | None:intergenic | 25.0% |
| ! | TTATGAAGAAGAACAAAAGA+AGG | + | chr8_2:17400314-17400333 | None:intergenic | 25.0% |
| ! | AATTCTTAGAATGGTTTCAT+TGG | - | chr8_2:17400354-17400373 | Msa1237820:three_prime_UTR | 25.0% |
| ! | ATTCTTAGAATGGTTTCATT+GGG | - | chr8_2:17400355-17400374 | Msa1237820:three_prime_UTR | 25.0% |
| !!! | TTTATGTGTGATTTTGATCT+TGG | - | chr8_2:17400553-17400572 | Msa1237820:three_prime_UTR | 25.0% |
| ! | TTAGAAAATAGAGTGTAGTT+AGG | - | chr8_2:17400954-17400973 | Msa1237820:intron | 25.0% |
| !! | AAGTAAACTTTTATGCAATG+TGG | - | chr8_2:17401057-17401076 | Msa1237820:intron | 25.0% |
| ! | AGTCAAAATACCTTATTCTT+AGG | + | chr8_2:17401257-17401276 | None:intergenic | 25.0% |
| ! | CTCATTATAAATTATCGTAC+AGG | - | chr8_2:17401503-17401522 | Msa1237820:intron | 25.0% |
| ! | TTTGTCAATTAGTGATCTTT+AGG | - | chr8_2:17401603-17401622 | Msa1237820:CDS | 25.0% |
| ! | AATGAAACTGATGTTGATAT+TGG | - | chr8_2:17401795-17401814 | Msa1237820:intron | 25.0% |
| !! | TATCTTTTAGTGTGAAAGAT+TGG | + | chr8_2:17402167-17402186 | None:intergenic | 25.0% |
| ! | AAGATAAAGTGAAGAAAGAA+TGG | - | chr8_2:17402181-17402200 | Msa1237820:intron | 25.0% |
| !!! | TAAATTACTTTTATGGTTGC+AGG | - | chr8_2:17402336-17402355 | Msa1237820:intron | 25.0% |
| ! | TGTACAAATTAATGTCATTC+TGG | - | chr8_2:17402470-17402489 | Msa1237820:intron | 25.0% |
| ! | TTGTATGTTCATATGCTTTA+AGG | - | chr8_2:17402600-17402619 | Msa1237820:CDS | 25.0% |
| ! | TGTATGTTCATATGCTTTAA+GGG | - | chr8_2:17402601-17402620 | Msa1237820:CDS | 25.0% |
| ! | GAAAATGTTACTAAAAGTCT+AGG | + | chr8_2:17402960-17402979 | None:intergenic | 25.0% |
| !!! | TTACTTGTTTTTGATACTCT+TGG | - | chr8_2:17403096-17403115 | Msa1237820:intron | 25.0% |
| ! | TTTCCTATATGACATCTTAT+GGG | - | chr8_2:17403280-17403299 | Msa1237820:intron | 25.0% |
| !! | TTATCTACAATGCTTGATTT+TGG | - | chr8_2:17403383-17403402 | Msa1237820:CDS | 25.0% |
| ! | CAAAAATAAAAATAAGGGGA+AGG | + | chr8_2:17403429-17403448 | None:intergenic | 25.0% |
| ! | AAACGGAGATTATAGTAAAA+TGG | - | chr8_2:17403455-17403474 | Msa1237820:intron | 25.0% |
| ! | AACGGAGATTATAGTAAAAT+GGG | - | chr8_2:17403456-17403475 | Msa1237820:intron | 25.0% |
| ! | GATCATACAATATATGTATG+TGG | - | chr8_2:17403708-17403727 | Msa1237820:CDS | 25.0% |
| !!! | AGTTGTTTTTACAATTGAAG+AGG | - | chr8_2:17403849-17403868 | Msa1237820:intron | 25.0% |
| ! | ACCAAGATAGATTATAGAAA+CGG | + | chr8_2:17403910-17403929 | None:intergenic | 25.0% |
| ! | ATCTCCATGTAAAAAAGAAT+AGG | - | chr8_2:17404069-17404088 | Msa1237820:CDS | 25.0% |
| !!! | TGTACCTATTCTTTTTTACA+TGG | + | chr8_2:17404076-17404095 | None:intergenic | 25.0% |
| ! | TGTAAAAAAGAATAGGTACA+TGG | - | chr8_2:17404076-17404095 | Msa1237820:CDS | 25.0% |
| ! | ATTGTGCTGTATAATGTTAA+CGG | - | chr8_2:17404112-17404131 | Msa1237820:CDS | 25.0% |
| ! | GTATGATACACATATGATTT+GGG | - | chr8_2:17404246-17404265 | Msa1237820:intron | 25.0% |
| ! | TATGATACACATATGATTTG+GGG | - | chr8_2:17404247-17404266 | Msa1237820:intron | 25.0% |
| ! | AAGAAAAATTGAAGTGATGA+CGG | + | chr8_2:17404470-17404489 | None:intergenic | 25.0% |
| ! | ATTCAACGAATAACACATAT+GGG | + | chr8_2:17404508-17404527 | None:intergenic | 25.0% |
| ! | AATTCAACGAATAACACATA+TGG | + | chr8_2:17404509-17404528 | None:intergenic | 25.0% |
| !! | ATTCGTTGAATTTTATATGC+AGG | - | chr8_2:17404517-17404536 | Msa1237820:intron | 25.0% |
| ! | TATACTTACCAAGTGTAAAT+GGG | + | chr8_2:17404612-17404631 | None:intergenic | 25.0% |
| ! | TTATACTTACCAAGTGTAAA+TGG | + | chr8_2:17404613-17404632 | None:intergenic | 25.0% |
| !! | TTTGAAAGTGTAAACACATA+TGG | - | chr8_2:17404649-17404668 | Msa1237820:intron | 25.0% |
| ! | ATTATTTGGTTGTGTTCTAT+TGG | - | chr8_2:17404693-17404712 | Msa1237820:CDS | 25.0% |
| ! | TTCTTAATTGCATATATGGA+TGG | - | chr8_2:17405145-17405164 | Msa1237820:intron | 25.0% |
| !!! | TGATTTTAGTTTCCAATAGA+TGG | - | chr8_2:17405197-17405216 | Msa1237820:intron | 25.0% |
| ! | ACCGAAAAAAAACTGTAAAT+TGG | - | chr8_2:17405245-17405264 | Msa1237820:intron | 25.0% |
| !! | ATCAATGTTGGTTAATTGAT+TGG | + | chr8_2:17405515-17405534 | None:intergenic | 25.0% |
| ! | TAATGTTACATCACACAATA+GGG | + | chr8_2:17405698-17405717 | None:intergenic | 25.0% |
| ! | TTAATGTTACATCACACAAT+AGG | + | chr8_2:17405699-17405718 | None:intergenic | 25.0% |
| !! | AGAATCAATATTCTAGTTGA+TGG | - | chr8_2:17405767-17405786 | Msa1237820:CDS | 25.0% |
| TTTGTACTATGTAGGAATGA+GGG | + | chr8_2:17400139-17400158 | None:intergenic | 30.0% | |
| ! | GTAGTATATGTGTTTCTGTT+TGG | - | chr8_2:17400397-17400416 | Msa1237820:three_prime_UTR | 30.0% |
| TTGTGAGAATAACTTTGTTC+TGG | - | chr8_2:17400483-17400502 | Msa1237820:three_prime_UTR | 30.0% | |
| GAAAGAAAAATTGGACTGTT+TGG | - | chr8_2:17400658-17400677 | Msa1237820:exon | 30.0% | |
| TCTGCAAATGTATTGTCTTA+TGG | - | chr8_2:17401021-17401040 | Msa1237820:intron | 30.0% | |
| TGCTAACAAAATGTTCTGTT+AGG | - | chr8_2:17401085-17401104 | Msa1237820:intron | 30.0% | |
| !! | TTTTCTTTTGATTCCAACGT+AGG | + | chr8_2:17401179-17401198 | None:intergenic | 30.0% |
| GTTGCATTTGGTAAATTCTA+TGG | + | chr8_2:17401291-17401310 | None:intergenic | 30.0% | |
| ! | TTGTGAAACTACATTTTCCT+CGG | + | chr8_2:17401442-17401461 | None:intergenic | 30.0% |
| AAAATGTAGTTTCACAACCA+AGG | - | chr8_2:17401445-17401464 | Msa1237820:intron | 30.0% | |
| !! | TTAGTGATCTTTAGGATCAT+AGG | - | chr8_2:17401611-17401630 | Msa1237820:CDS | 30.0% |
| CACATACAAAATAACTCCAT+AGG | - | chr8_2:17401867-17401886 | Msa1237820:intron | 30.0% | |
| TGTACATGCAATAGAACAAA+GGG | + | chr8_2:17401956-17401975 | None:intergenic | 30.0% | |
| TTGTACATGCAATAGAACAA+AGG | + | chr8_2:17401957-17401976 | None:intergenic | 30.0% | |
| ! | CCAATAAGAAGCACATAAAA+TGG | + | chr8_2:17402072-17402091 | None:intergenic | 30.0% |
| ! | CCATTTTATGTGCTTCTTAT+TGG | - | chr8_2:17402069-17402088 | Msa1237820:intron | 30.0% |
| AGATAGAGACAAACAATAAC+CGG | - | chr8_2:17402241-17402260 | Msa1237820:intron | 30.0% | |
| ACATAAAAAACACTTTCTCC+CGG | + | chr8_2:17402263-17402282 | None:intergenic | 30.0% | |
| ATCTACAACAACAAACTTCA+AGG | + | chr8_2:17402673-17402692 | None:intergenic | 30.0% | |
| !! | GTTTGTTGTTGTAGATTATG+AGG | - | chr8_2:17402677-17402696 | Msa1237820:intron | 30.0% |
| AAAGTTGTTGTAGTTTCAGA+TGG | - | chr8_2:17402732-17402751 | Msa1237820:intron | 30.0% | |
| ATATTGCTTGACTATCATTC+AGG | - | chr8_2:17402981-17403000 | Msa1237820:intron | 30.0% | |
| TATTGCTTGACTATCATTCA+GGG | - | chr8_2:17402982-17403001 | Msa1237820:intron | 30.0% | |
| TCAAATCATACCTTGAGATT+TGG | + | chr8_2:17403048-17403067 | None:intergenic | 30.0% | |
| ATACTCTTGGATTTAAGAAC+AGG | - | chr8_2:17403109-17403128 | Msa1237820:intron | 30.0% | |
| TATACTTCTTTCTCTGTATC+AGG | - | chr8_2:17403232-17403251 | Msa1237820:intron | 30.0% | |
| CTTTCCTATATGACATCTTA+TGG | - | chr8_2:17403279-17403298 | Msa1237820:intron | 30.0% | |
| ! | TATTGAGTTTTTCTCTGTAC+AGG | - | chr8_2:17403529-17403548 | Msa1237820:intron | 30.0% |
| ! | TTGTAGTAGCATTTTCACTA+AGG | - | chr8_2:17403672-17403691 | Msa1237820:CDS | 30.0% |
| TTTATGATAAAGAGGACGTT+TGG | - | chr8_2:17403763-17403782 | Msa1237820:CDS | 30.0% | |
| TTATGATAAAGAGGACGTTT+GGG | - | chr8_2:17403764-17403783 | Msa1237820:CDS | 30.0% | |
| TGACATTAAAACGTAGGTAA+TGG | + | chr8_2:17403997-17404016 | None:intergenic | 30.0% | |
| ! | AGATGTATTTTATGGACGTT+TGG | + | chr8_2:17404040-17404059 | None:intergenic | 30.0% |
| ! | CTATGTGGAGATGTATTTTA+TGG | + | chr8_2:17404048-17404067 | None:intergenic | 30.0% |
| CATAAAATACATCTCCACAT+AGG | - | chr8_2:17404046-17404065 | Msa1237820:intron | 30.0% | |
| !! | CTATTGACAACTACTTTTAC+AGG | - | chr8_2:17404153-17404172 | Msa1237820:CDS | 30.0% |
| !! | ACTACTTTTACAGGTATGAT+TGG | - | chr8_2:17404162-17404181 | Msa1237820:CDS | 30.0% |
| GGTATGATACACATATGATT+TGG | - | chr8_2:17404245-17404264 | Msa1237820:intron | 30.0% | |
| ! | ATGTTTCTAATCTTCACTTG+TGG | - | chr8_2:17404310-17404329 | Msa1237820:intron | 30.0% |
| CTTCACGACAAAATTAGAAA+CGG | + | chr8_2:17404398-17404417 | None:intergenic | 30.0% | |
| ! | TGAAGTGTTAGATGGAAAAT+TGG | - | chr8_2:17404413-17404432 | Msa1237820:CDS | 30.0% |
| TAGAGACGGAAAAATAAAAG+TGG | + | chr8_2:17404443-17404462 | None:intergenic | 30.0% | |
| !! | ATATGTCGCTTTAAACTTGA+TGG | - | chr8_2:17404552-17404571 | Msa1237820:intron | 30.0% |
| TATATAGTCCCATTTACACT+TGG | - | chr8_2:17404601-17404620 | Msa1237820:intron | 30.0% | |
| !! | AATATGATCGGTTCACATTT+TGG | - | chr8_2:17404761-17404780 | Msa1237820:CDS | 30.0% |
| ! | TAGTTAGCACAGCATTATTT+TGG | + | chr8_2:17404863-17404882 | None:intergenic | 30.0% |
| !! | TTTTTAGAAAGCATGGAGAA+GGG | + | chr8_2:17404931-17404950 | None:intergenic | 30.0% |
| !! | ATTTTTAGAAAGCATGGAGA+AGG | + | chr8_2:17404932-17404951 | None:intergenic | 30.0% |
| TAAAAATCCACGTAGATGTT+TGG | - | chr8_2:17404945-17404964 | Msa1237820:CDS | 30.0% | |
| TATACTTCCGAACTAACTAT+AGG | - | chr8_2:17405047-17405066 | Msa1237820:CDS | 30.0% | |
| ATACTTCCGAACTAACTATA+GGG | - | chr8_2:17405048-17405067 | Msa1237820:CDS | 30.0% | |
| TCTACATTATTGCCATCTAT+TGG | + | chr8_2:17405212-17405231 | None:intergenic | 30.0% | |
| GTCATGTAAATCATAATTGC+AGG | - | chr8_2:17405393-17405412 | Msa1237820:intron | 30.0% | |
| TGGTTAACTTCTTCAATATG+AGG | + | chr8_2:17405495-17405514 | None:intergenic | 30.0% | |
| ACATATACACAATGTCCTAA+CGG | + | chr8_2:17405590-17405609 | None:intergenic | 30.0% | |
| ! | TCATTTTGCTTTACAAGACT+TGG | + | chr8_2:17405822-17405841 | None:intergenic | 30.0% |
| AAAGAGGGAAGACTAATAAA+AGG | - | chr8_2:17405861-17405880 | Msa1237820:five_prime_UTR | 30.0% | |
| GTTTGTACTATGTAGGAATG+AGG | + | chr8_2:17400140-17400159 | None:intergenic | 35.0% | |
| ATAGTGAGAAAGTTAGGAGA+AGG | + | chr8_2:17400243-17400262 | None:intergenic | 35.0% | |
| AGGAAGATAGTGAGAAAGTT+AGG | + | chr8_2:17400249-17400268 | None:intergenic | 35.0% | |
| ACAAAGTTATTCTCACAACC+AGG | + | chr8_2:17400481-17400500 | None:intergenic | 35.0% | |
| TTTGCTTGCTTAGAAACTGT+TGG | - | chr8_2:17400584-17400603 | Msa1237820:three_prime_UTR | 35.0% | |
| AGAAAAATTGGACTGTTTGG+TGG | - | chr8_2:17400661-17400680 | Msa1237820:exon | 35.0% | |
| GAAAAATTGGACTGTTTGGT+GGG | - | chr8_2:17400662-17400681 | Msa1237820:exon | 35.0% | |
| AATTGAGCATACATCACACA+AGG | + | chr8_2:17400877-17400896 | None:intergenic | 35.0% | |
| CATGACAACTCTAGTATGAT+TGG | + | chr8_2:17401207-17401226 | None:intergenic | 35.0% | |
| CAATCATACTAGAGTTGTCA+TGG | - | chr8_2:17401205-17401224 | Msa1237820:intron | 35.0% | |
| TTGTAGCAAGCCTAAGAATA+AGG | - | chr8_2:17401244-17401263 | Msa1237820:intron | 35.0% | |
| CAATTCAGTAACGTTGCATT+TGG | + | chr8_2:17401303-17401322 | None:intergenic | 35.0% | |
| TTCATCAGCTATATTTGCCT+TGG | + | chr8_2:17401465-17401484 | None:intergenic | 35.0% | |
| !! | CTGTACAGAACTTTTCAAGA+TGG | - | chr8_2:17401761-17401780 | Msa1237820:intron | 35.0% |
| !! | ACTTTTCAAGATGGTTTGTG+AGG | - | chr8_2:17401770-17401789 | Msa1237820:intron | 35.0% |
| AAGTTTAATCCAGCATCTTG+TGG | + | chr8_2:17401840-17401859 | None:intergenic | 35.0% | |
| ACAAGATGCTGGATTAAACT+TGG | - | chr8_2:17401839-17401858 | Msa1237820:intron | 35.0% | |
| GAGAAAGTTGAACATACCTA+TGG | + | chr8_2:17401886-17401905 | None:intergenic | 35.0% | |
| GTATAACTGTATGGACACTT+AGG | + | chr8_2:17401988-17402007 | None:intergenic | 35.0% | |
| ! | AAGTGGAGAGTATAACTGTA+TGG | + | chr8_2:17401997-17402016 | None:intergenic | 35.0% |
| !!! | ATGTTGCAGAAGTGTTTTTG+TGG | - | chr8_2:17402030-17402049 | Msa1237820:intron | 35.0% |
| !!! | AGAAGTGTTTTTGTGGCTTA+TGG | - | chr8_2:17402037-17402056 | Msa1237820:intron | 35.0% |
| ! | TGAGCAAGAGAAGCTTTTAA+AGG | - | chr8_2:17402121-17402140 | Msa1237820:intron | 35.0% |
| GATTGGCATGAAAAGAAACT+AGG | + | chr8_2:17402150-17402169 | None:intergenic | 35.0% | |
| GATAGAGACAAACAATAACC+GGG | - | chr8_2:17402242-17402261 | Msa1237820:intron | 35.0% | |
| ! | GAATATGTTGCAGAAAGTGT+TGG | - | chr8_2:17402370-17402389 | Msa1237820:intron | 35.0% |
| !! | ATTCTGGTTTCTTGAAGTTC+TGG | - | chr8_2:17402486-17402505 | Msa1237820:intron | 35.0% |
| ! | TTTTTGCATTGGAGGAATAG+AGG | - | chr8_2:17402516-17402535 | Msa1237820:CDS | 35.0% |
| ! | CAACAACTTTGCTGTCAATT+TGG | + | chr8_2:17402722-17402741 | None:intergenic | 35.0% |
| ATCTTCACATATGTTTGTGC+AGG | + | chr8_2:17402767-17402786 | None:intergenic | 35.0% | |
| TATGTGAAGATACCGTTCTT+TGG | - | chr8_2:17402776-17402795 | Msa1237820:intron | 35.0% | |
| ACTGCAAATACTATGCAGAA+GGG | + | chr8_2:17402833-17402852 | None:intergenic | 35.0% | |
| CATAGTATTTGCAGTGGTTT+GGG | - | chr8_2:17402838-17402857 | Msa1237820:intron | 35.0% | |
| TAAATGAAGAGATGATGCCT+CGG | + | chr8_2:17403079-17403098 | None:intergenic | 35.0% | |
| !!! | GTTTTAAGAGATAGCTTTGC+TGG | - | chr8_2:17403174-17403193 | Msa1237820:CDS | 35.0% |
| ! | ATAGCTTTGCTGGATACTAA+TGG | - | chr8_2:17403184-17403203 | Msa1237820:CDS | 35.0% |
| TTCTTTCTCTGTATCAGGTT+GGG | - | chr8_2:17403237-17403256 | Msa1237820:intron | 35.0% | |
| ACACCCATAAGATGTCATAT+AGG | + | chr8_2:17403286-17403305 | None:intergenic | 35.0% | |
| TAGTAAAATGGGAACACAAG+TGG | - | chr8_2:17403467-17403486 | Msa1237820:intron | 35.0% | |
| !! | CCAAAAGCATTTATTCAGGT+TGG | + | chr8_2:17403497-17403516 | None:intergenic | 35.0% |
| ! | CCAACCTGAATAAATGCTTT+TGG | - | chr8_2:17403494-17403513 | Msa1237820:intron | 35.0% |
| !! | AAGGCCAAAAGCATTTATTC+AGG | + | chr8_2:17403501-17403520 | None:intergenic | 35.0% |
| ! | AGTAGCATTTTCACTAAGGT+TGG | - | chr8_2:17403676-17403695 | Msa1237820:CDS | 35.0% |
| AGTAACACAAGGTGAATAGA+AGG | + | chr8_2:17403734-17403753 | None:intergenic | 35.0% | |
| TAGATTATAGAAACGGCTCA+TGG | + | chr8_2:17403903-17403922 | None:intergenic | 35.0% | |
| GCCGTTTCTATAATCTATCT+TGG | - | chr8_2:17403906-17403925 | Msa1237820:intron | 35.0% | |
| ! | TTTTACATGGAGATCCTATG+TGG | + | chr8_2:17404063-17404082 | None:intergenic | 35.0% |
| ! | CTTTTACAGGTATGATTGGT+TGG | - | chr8_2:17404166-17404185 | Msa1237820:CDS | 35.0% |
| TTTCTAATCTTCACTTGTGG+AGG | - | chr8_2:17404313-17404332 | Msa1237820:intron | 35.0% | |
| !! | TTTTGTCGTGAAGTGTTAGA+TGG | - | chr8_2:17404405-17404424 | Msa1237820:CDS | 35.0% |
| TTAAAGCGACATATGTGATG+AGG | + | chr8_2:17404546-17404565 | None:intergenic | 35.0% | |
| ! | TTAAACTTGATGGATGGACA+TGG | - | chr8_2:17404562-17404581 | Msa1237820:intron | 35.0% |
| ! | GAAAGTGTAAACACATATGG+TGG | - | chr8_2:17404652-17404671 | Msa1237820:intron | 35.0% |
| GGTTCAACCATCAATATGAT+CGG | - | chr8_2:17404749-17404768 | Msa1237820:CDS | 35.0% | |
| ATGTGAACCGATCATATTGA+TGG | + | chr8_2:17404759-17404778 | None:intergenic | 35.0% | |
| GAGACAATAAAGAGTTGTGT+TGG | - | chr8_2:17404788-17404807 | Msa1237820:intron | 35.0% | |
| !! | TTTTAGAAAGCATGGAGAAG+GGG | + | chr8_2:17404930-17404949 | None:intergenic | 35.0% |
| !! | ACGTGGATTTTTAGAAAGCA+TGG | + | chr8_2:17404938-17404957 | None:intergenic | 35.0% |
| TATACTTCCAAACATCTACG+TGG | + | chr8_2:17404955-17404974 | None:intergenic | 35.0% | |
| ! | TGTTTGGAAGTATACTTGAC+AGG | - | chr8_2:17404961-17404980 | Msa1237820:CDS | 35.0% |
| ! | GTTTGGAAGTATACTTGACA+GGG | - | chr8_2:17404962-17404981 | Msa1237820:CDS | 35.0% |
| ! | TTTGTCCAGAAGTATACTTC+TGG | - | chr8_2:17404997-17405016 | Msa1237820:CDS | 35.0% |
| TACTTCCGAACTAACTATAG+GGG | - | chr8_2:17405049-17405068 | Msa1237820:CDS | 35.0% | |
| TAGATGGCAATAATGTAGAC+TGG | - | chr8_2:17405213-17405232 | Msa1237820:intron | 35.0% | |
| !!! | CAGTTTTTTTTCGGTACTCA+AGG | + | chr8_2:17405240-17405259 | None:intergenic | 35.0% |
| TTGCTATGTCATAGTCACAT+GGG | + | chr8_2:17405323-17405342 | None:intergenic | 35.0% | |
| ATTGCTATGTCATAGTCACA+TGG | + | chr8_2:17405324-17405343 | None:intergenic | 35.0% | |
| ! | GAGGTGATCTCAAGATTTTA+TGG | - | chr8_2:17405442-17405461 | Msa1237820:intron | 35.0% |
| ! | CTCAAGATTTTATGGACAAG+AGG | - | chr8_2:17405450-17405469 | Msa1237820:intron | 35.0% |
| AATCTGCTGAAGATCAATGT+TGG | + | chr8_2:17405527-17405546 | None:intergenic | 35.0% | |
| ! | AGCCAAATGATTTGATAGCA+TGG | - | chr8_2:17405635-17405654 | Msa1237820:intron | 35.0% |
| GTCCATGCTATCAAATCATT+TGG | + | chr8_2:17405640-17405659 | None:intergenic | 35.0% | |
| ACAGACGAAGATTCAAAAGA+GGG | - | chr8_2:17405846-17405865 | Msa1237820:five_prime_UTR | 35.0% | |
| AAGTTAGGAGAAGGAAGTGA+CGG | + | chr8_2:17400234-17400253 | None:intergenic | 40.0% | |
| !! | GTTTCTGTTTGGTGTGTCTT+TGG | - | chr8_2:17400408-17400427 | Msa1237820:three_prime_UTR | 40.0% |
| !!! | GTTTGGTGTGTCTTTGGTTT+TGG | - | chr8_2:17400414-17400433 | Msa1237820:three_prime_UTR | 40.0% |
| ! | ATGATGATGTTGCTCCAACA+AGG | - | chr8_2:17400455-17400474 | Msa1237820:three_prime_UTR | 40.0% |
| GTTGGAACAGTCAAGAGATT+TGG | - | chr8_2:17400602-17400621 | Msa1237820:three_prime_UTR | 40.0% | |
| AAAGTCCCAACTTGGATTGA+TGG | - | chr8_2:17401110-17401129 | Msa1237820:intron | 40.0% | |
| GTGGAAAACGCTGAATATGT+TGG | - | chr8_2:17401134-17401153 | Msa1237820:intron | 40.0% | |
| AACGCTGAATATGTTGGTGT+CGG | - | chr8_2:17401140-17401159 | Msa1237820:intron | 40.0% | |
| !! | TTAGGCTTGCTACAACAATC+AGG | + | chr8_2:17401239-17401258 | None:intergenic | 40.0% |
| ! | GCTCACCAATGAGATCATTT+TGG | - | chr8_2:17401412-17401431 | Msa1237820:intron | 40.0% |
| GTGCACCAAAATGATCTCAT+TGG | + | chr8_2:17401420-17401439 | None:intergenic | 40.0% | |
| GCAAATATAGCTGATGAAGC+CGG | - | chr8_2:17401467-17401486 | Msa1237820:intron | 40.0% | |
| ACTTCTGCAACATCAACCAA+TGG | + | chr8_2:17402023-17402042 | None:intergenic | 40.0% | |
| ! | TTTTTGTGGCTTATGGCTGT+TGG | - | chr8_2:17402044-17402063 | Msa1237820:intron | 40.0% |
| GAATGGATGCAATAATCGCA+AGG | - | chr8_2:17402198-17402217 | Msa1237820:intron | 40.0% | |
| GTACAGCATAACCAAGAAAC+AGG | + | chr8_2:17402455-17402474 | None:intergenic | 40.0% | |
| !!! | CTGGTGGTTCTTTTTTGCAT+TGG | - | chr8_2:17402505-17402524 | Msa1237820:intron | 40.0% |
| !!! | GTGGTTCTTTTTTGCATTGG+AGG | - | chr8_2:17402508-17402527 | Msa1237820:intron | 40.0% |
| TAAGGGTCTACAAACTTGTC+TGG | - | chr8_2:17402618-17402637 | Msa1237820:CDS | 40.0% | |
| AGCAAGTGTCAGATATGGAA+CGG | + | chr8_2:17402804-17402823 | None:intergenic | 40.0% | |
| GTAACAGCAAGTGTCAGATA+TGG | + | chr8_2:17402809-17402828 | None:intergenic | 40.0% | |
| CACTGCAAATACTATGCAGA+AGG | + | chr8_2:17402834-17402853 | None:intergenic | 40.0% | |
| CTTCTGCATAGTATTTGCAG+TGG | - | chr8_2:17402832-17402851 | Msa1237820:intron | 40.0% | |
| GCATAGTATTTGCAGTGGTT+TGG | - | chr8_2:17402837-17402856 | Msa1237820:intron | 40.0% | |
| AACGACAAGCATCATATGCA+TGG | - | chr8_2:17402867-17402886 | Msa1237820:CDS | 40.0% | |
| CAAGCATCATATGCATGGAT+TGG | - | chr8_2:17402872-17402891 | Msa1237820:CDS | 40.0% | |
| TGTTCGCATACCAAATCTCA+AGG | - | chr8_2:17403035-17403054 | Msa1237820:intron | 40.0% | |
| AAATGAAGAGATGATGCCTC+GGG | + | chr8_2:17403078-17403097 | None:intergenic | 40.0% | |
| ! | TTAAGAACAGGTGTTGTGCA+TGG | - | chr8_2:17403121-17403140 | Msa1237820:intron | 40.0% |
| ! | TAAGAACAGGTGTTGTGCAT+GGG | - | chr8_2:17403122-17403141 | Msa1237820:intron | 40.0% |
| CTTTGCTGGATACTAATGGA+TGG | - | chr8_2:17403188-17403207 | Msa1237820:intron | 40.0% | |
| CTTCTTTCTCTGTATCAGGT+TGG | - | chr8_2:17403236-17403255 | Msa1237820:intron | 40.0% | |
| TATGGGTGTTCGTCTCTAAA+TGG | - | chr8_2:17403297-17403316 | Msa1237820:intron | 40.0% | |
| ! | TTTTCTCTGTACAGGTAGCT+CGG | - | chr8_2:17403537-17403556 | Msa1237820:intron | 40.0% |
| TACCACGTTTGTTTGATCCT+TGG | - | chr8_2:17403603-17403622 | Msa1237820:intron | 40.0% | |
| ACCACGTTTGTTTGATCCTT+GGG | - | chr8_2:17403604-17403623 | Msa1237820:intron | 40.0% | |
| !! | GGTTACAGCATCATTGGTTT+CGG | - | chr8_2:17403629-17403648 | Msa1237820:intron | 40.0% |
| !! | GTTACAGCATCATTGGTTTC+GGG | - | chr8_2:17403630-17403649 | Msa1237820:intron | 40.0% |
| !! | TTACAGCATCATTGGTTTCG+GGG | - | chr8_2:17403631-17403650 | Msa1237820:intron | 40.0% |
| TTTCGGGGACATAATCTTAC+CGG | - | chr8_2:17403646-17403665 | Msa1237820:intron | 40.0% | |
| GAAAATGCTACTACAAGTCC+CGG | + | chr8_2:17403668-17403687 | None:intergenic | 40.0% | |
| GAGAGCTTATGTCGTGTTTA+TGG | + | chr8_2:17403881-17403900 | None:intergenic | 40.0% | |
| !! | GTGATGACGGAAATTAGAGA+CGG | + | chr8_2:17404457-17404476 | None:intergenic | 40.0% |
| ! | GTCGCTTTAAACTTGATGGA+TGG | - | chr8_2:17404556-17404575 | Msa1237820:intron | 40.0% |
| ! | TTTAGAAAGCATGGAGAAGG+GGG | + | chr8_2:17404929-17404948 | None:intergenic | 40.0% |
| ! | TCCAGAAGTATACTTCTGGA+GGG | - | chr8_2:17405001-17405020 | Msa1237820:CDS | 40.0% |
| ATGGGATGATAACACAACGA+CGG | + | chr8_2:17405305-17405324 | None:intergenic | 40.0% | |
| !!! | TGCAGGCACTTTTTTGTCAT+TGG | - | chr8_2:17405410-17405429 | Msa1237820:intron | 40.0% |
| !!! | GCAGGCACTTTTTTGTCATT+GGG | - | chr8_2:17405411-17405430 | Msa1237820:intron | 40.0% |
| TTGTCATTGGGAAAGAAGAG+AGG | - | chr8_2:17405423-17405442 | Msa1237820:intron | 40.0% | |
| ATATGAGGACAATGCCTTTC+TGG | + | chr8_2:17405480-17405499 | None:intergenic | 40.0% | |
| !! | CTTCTTCTGAGATAGCAAGT+TGG | - | chr8_2:17405726-17405745 | Msa1237820:CDS | 40.0% |
| !! | GGATTTTGAGAAGACTCTCA+TGG | + | chr8_2:17405801-17405820 | None:intergenic | 40.0% |
| ! | CTTTTGAATCTTCGTCTGTG+AGG | + | chr8_2:17405845-17405864 | None:intergenic | 40.0% |
| CACAGACGAAGATTCAAAAG+AGG | - | chr8_2:17405845-17405864 | Msa1237820:exon | 40.0% | |
| GTTAGGTCAAAGTCCCAACT+TGG | - | chr8_2:17401102-17401121 | Msa1237820:intron | 45.0% | |
| CCACACCATCAATCCAAGTT+GGG | + | chr8_2:17401118-17401137 | None:intergenic | 45.0% | |
| TCCACACCATCAATCCAAGT+TGG | + | chr8_2:17401119-17401138 | None:intergenic | 45.0% | |
| AATGAGAATGGCTGAAGCAC+CGG | + | chr8_2:17401489-17401508 | None:intergenic | 45.0% | |
| ! | TCTTGTGGAAGCATAACAGC+AGG | + | chr8_2:17401825-17401844 | None:intergenic | 45.0% |
| GTTATGCTTCCACAAGATGC+TGG | - | chr8_2:17401828-17401847 | Msa1237820:intron | 45.0% | |
| ATACTCTCCACTTCGTCCAT+TGG | - | chr8_2:17402004-17402023 | Msa1237820:CDS | 45.0% | |
| ACATCAACCAATGGACGAAG+TGG | + | chr8_2:17402014-17402033 | None:intergenic | 45.0% | |
| ! | GTGCTTCTTATTGGTCTGCT+TGG | - | chr8_2:17402078-17402097 | Msa1237820:intron | 45.0% |
| TTGCTCAATAGCAGCTTCTC+TGG | + | chr8_2:17402108-17402127 | None:intergenic | 45.0% | |
| ! | TGTGCTTGCTTCCTGTTTCT+TGG | - | chr8_2:17402441-17402460 | Msa1237820:intron | 45.0% |
| ! | CTGGTTTCTTGAAGTTCTGG+TGG | - | chr8_2:17402489-17402508 | Msa1237820:intron | 45.0% |
| TATGGAACGGCTCCAAAGAA+CGG | + | chr8_2:17402791-17402810 | None:intergenic | 45.0% | |
| ! | AGTATTTGCAGTGGTTTGGG+CGG | - | chr8_2:17402841-17402860 | Msa1237820:intron | 45.0% |
| ATGATTTGAAAGTTCCCCCG+AGG | - | chr8_2:17403059-17403078 | Msa1237820:intron | 45.0% | |
| AATGAAGAGATGATGCCTCG+GGG | + | chr8_2:17403077-17403096 | None:intergenic | 45.0% | |
| ! | AAGAACAGGTGTTGTGCATG+GGG | - | chr8_2:17403123-17403142 | Msa1237820:intron | 45.0% |
| TTTCTCTGTACAGGTAGCTC+GGG | - | chr8_2:17403538-17403557 | Msa1237820:intron | 45.0% | |
| GGTGATAAGAGTGGAGAAGA+CGG | - | chr8_2:17403560-17403579 | Msa1237820:CDS | 45.0% | |
| ! | CGTGGTAACTTGAGAAGCAT+GGG | + | chr8_2:17403590-17403609 | None:intergenic | 45.0% |
| ACGTGGTAACTTGAGAAGCA+TGG | + | chr8_2:17403591-17403610 | None:intergenic | 45.0% | |
| CCACGTTTGTTTGATCCTTG+GGG | - | chr8_2:17403605-17403624 | Msa1237820:intron | 45.0% | |
| TTCGGGGACATAATCTTACC+GGG | - | chr8_2:17403647-17403666 | Msa1237820:intron | 45.0% | |
| GCAATGACTGCTTATGGTCT+AGG | - | chr8_2:17404224-17404243 | Msa1237820:intron | 45.0% | |
| CTATATAGAGCAAAGCTGGC+TGG | + | chr8_2:17404588-17404607 | None:intergenic | 45.0% | |
| GGGACTATATAGAGCAAAGC+TGG | + | chr8_2:17404592-17404611 | None:intergenic | 45.0% | |
| CCTTTGCACTGTTCATGCAA+AGG | + | chr8_2:17404731-17404750 | None:intergenic | 45.0% | |
| CCTTTGCATGAACAGTGCAA+AGG | - | chr8_2:17404728-17404747 | Msa1237820:CDS | 45.0% | |
| ! | TTAGAAAGCATGGAGAAGGG+GGG | + | chr8_2:17404928-17404947 | None:intergenic | 45.0% |
| ! | GTCCAGAAGTATACTTCTGG+AGG | - | chr8_2:17405000-17405019 | Msa1237820:CDS | 45.0% |
| TCCGAACTAACTATAGGGGA+TGG | - | chr8_2:17405053-17405072 | Msa1237820:CDS | 45.0% | |
| CCCATCCCCTATAGTTAGTT+CGG | + | chr8_2:17405057-17405076 | None:intergenic | 45.0% | |
| CCGAACTAACTATAGGGGAT+GGG | - | chr8_2:17405054-17405073 | Msa1237820:CDS | 45.0% | |
| CCATGCAGCGAGTTTATTTC+GGG | + | chr8_2:17405090-17405109 | None:intergenic | 45.0% | |
| GCCATGCAGCGAGTTTATTT+CGG | + | chr8_2:17405091-17405110 | None:intergenic | 45.0% | |
| !! | CTTCTGAGATAGCAAGTTGG+AGG | - | chr8_2:17405729-17405748 | Msa1237820:CDS | 45.0% |
| AGAAGACTCTCATGGAAGCA+AGG | + | chr8_2:17405793-17405812 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTAATGATTTT+TGG | - | chr8_2:17401554-17401573 | Msa1237820:intron | 5.0% |
| !!! | TTTTTTTTTTAATGATTTTT+GGG | - | chr8_2:17401555-17401574 | Msa1237820:intron | 5.0% |
| TTAGGAGAAGGAAGTGACGG+TGG | + | chr8_2:17400231-17400250 | None:intergenic | 50.0% | |
| !!! | GGTGTGTCTTTGGTTTTGGC+TGG | - | chr8_2:17400418-17400437 | Msa1237820:three_prime_UTR | 50.0% |
| ! | TTCTCACAACCAGGCCTTGT+TGG | + | chr8_2:17400472-17400491 | None:intergenic | 50.0% |
| !! | CCCAACTTGGATTGATGGTG+TGG | - | chr8_2:17401115-17401134 | Msa1237820:intron | 50.0% |
| !! | GTTGGTGTCGGTGCAAGATT+CGG | - | chr8_2:17401152-17401171 | Msa1237820:intron | 50.0% |
| ! | TGCAAGATTCGGTCCTACGT+TGG | - | chr8_2:17401163-17401182 | Msa1237820:intron | 50.0% |
| !! | GGCTTGCTACAACAATCAGG+AGG | + | chr8_2:17401236-17401255 | None:intergenic | 50.0% |
| !! | GAGATCATTTTGGTGCACCG+AGG | - | chr8_2:17401422-17401441 | Msa1237820:intron | 50.0% |
| !! | GCAGAAAGTGTTGGTTCTCG+TGG | - | chr8_2:17402379-17402398 | Msa1237820:intron | 50.0% |
| !! | TGTTGGTTCTCGTGGTTACG+TGG | - | chr8_2:17402387-17402406 | Msa1237820:intron | 50.0% |
| GGGTCTACAAACTTGTCTGG+CGG | - | chr8_2:17402621-17402640 | Msa1237820:CDS | 50.0% | |
| GTCTGGCGGCTCTATTATCA+TGG | - | chr8_2:17402635-17402654 | Msa1237820:CDS | 50.0% | |
| ATGAAGAGATGATGCCTCGG+GGG | + | chr8_2:17403076-17403095 | None:intergenic | 50.0% | |
| GGGTGTTCGTCTCTAAATGG+TGG | - | chr8_2:17403300-17403319 | Msa1237820:intron | 50.0% | |
| CCACTATCATCACGCTCTCA+TGG | + | chr8_2:17403328-17403347 | None:intergenic | 50.0% | |
| ! | CCATGAGAGCGTGATGATAG+TGG | - | chr8_2:17403325-17403344 | Msa1237820:CDS | 50.0% |
| TTCTCTGTACAGGTAGCTCG+GGG | - | chr8_2:17403539-17403558 | Msa1237820:intron | 50.0% | |
| CCCCAAGGATCAAACAAACG+TGG | + | chr8_2:17403608-17403627 | None:intergenic | 50.0% | |
| CGTTTGTTTGATCCTTGGGG+TGG | - | chr8_2:17403608-17403627 | Msa1237820:intron | 50.0% | |
| ATGATGCTGTAACCACCCCA+AGG | + | chr8_2:17403623-17403642 | None:intergenic | 50.0% | |
| TGGGGTGGTTACAGCATCAT+TGG | - | chr8_2:17403623-17403642 | Msa1237820:intron | 50.0% | |
| GTGTGGGCAATGACTGCTTA+TGG | - | chr8_2:17404218-17404237 | Msa1237820:intron | 50.0% | |
| ! | GCCCTCCAGAAGTATACTTC+TGG | + | chr8_2:17405005-17405024 | None:intergenic | 50.0% |
| CCCGAAATAAACTCGCTGCA+TGG | - | chr8_2:17405087-17405106 | Msa1237820:intron | 50.0% | |
| TCCAAGCAGCTGACATCTCT+TGG | - | chr8_2:17405268-17405287 | Msa1237820:intron | 50.0% | |
| TCCAAGAGATGTCAGCTGCT+TGG | + | chr8_2:17405272-17405291 | None:intergenic | 50.0% | |
| GGACAAGAGGAGAACCAGAA+AGG | - | chr8_2:17405463-17405482 | Msa1237820:intron | 50.0% | |
| GGAGAGTGATAGCAACCGTT+AGG | - | chr8_2:17405572-17405591 | Msa1237820:intron | 50.0% | |
| GATGTTGCTCCAACAAGGCC+TGG | - | chr8_2:17400460-17400479 | Msa1237820:three_prime_UTR | 55.0% | |
| GTAGCTCGGGGTGATAAGAG+TGG | - | chr8_2:17403551-17403570 | Msa1237820:intron | 55.0% | |
| GCAAAGAAGAACCTCCGAGC+TGG | - | chr8_2:17404188-17404207 | Msa1237820:CDS | 55.0% | |
| ! | ACACGAAGTATCCAGCTCGG+AGG | + | chr8_2:17404202-17404221 | None:intergenic | 55.0% |
| TCCGAGCTGGATACTTCGTG+TGG | - | chr8_2:17404201-17404220 | Msa1237820:intron | 55.0% | |
| ! | CCCACACGAAGTATCCAGCT+CGG | + | chr8_2:17404205-17404224 | None:intergenic | 55.0% |
| CCGAGCTGGATACTTCGTGT+GGG | - | chr8_2:17404202-17404221 | Msa1237820:intron | 55.0% | |
| AGGGGAAGGAAGCAGCGTCA+AGG | + | chr8_2:17403415-17403434 | None:intergenic | 60.0% | |
| GGAGAAGGGGGGAGAAGCTC+CGG | + | chr8_2:17404917-17404936 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 17400130 | 17406079 | 17400130 | ID=Msa1237820;Name=Msa1237820 |
| chr8_2 | mRNA | 17400130 | 17406079 | 17400130 | ID=Msa1237820-mRNA-1;Parent=Msa1237820;Name=Msa1237820-mRNA-1;_AED=0.10;_eAED=0.10;_QI=234|1|1|1|0.84|0.85|14|546|541 |
| chr8_2 | exon | 17400130 | 17400794 | 17400130 | ID=Msa1237820-mRNA-1:exon:6664;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17401587 | 17401670 | 17401587 | ID=Msa1237820-mRNA-1:exon:6663;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17401964 | 17402034 | 17401964 | ID=Msa1237820-mRNA-1:exon:6662;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17402516 | 17402658 | 17402516 | ID=Msa1237820-mRNA-1:exon:6661;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17402863 | 17402955 | 17402863 | ID=Msa1237820-mRNA-1:exon:6660;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17403153 | 17403206 | 17403153 | ID=Msa1237820-mRNA-1:exon:6659;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17403302 | 17403464 | 17403302 | ID=Msa1237820-mRNA-1:exon:6658;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17403553 | 17403587 | 17403553 | ID=Msa1237820-mRNA-1:exon:6657;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17403672 | 17403851 | 17403672 | ID=Msa1237820-mRNA-1:exon:6656;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17404067 | 17404218 | 17404067 | ID=Msa1237820-mRNA-1:exon:6655;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17404321 | 17404440 | 17404321 | ID=Msa1237820-mRNA-1:exon:6654;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17404685 | 17404796 | 17404685 | ID=Msa1237820-mRNA-1:exon:6653;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17404944 | 17405102 | 17404944 | ID=Msa1237820-mRNA-1:exon:6652;Parent=Msa1237820-mRNA-1 |
| chr8_2 | exon | 17405705 | 17406079 | 17405705 | ID=Msa1237820-mRNA-1:exon:6651;Parent=Msa1237820-mRNA-1 |
| chr8_2 | five_prime_UTR | 17405846 | 17406079 | 17405846 | ID=Msa1237820-mRNA-1:five_prime_utr;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17405705 | 17405845 | 17405705 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17404944 | 17405102 | 17404944 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17404685 | 17404796 | 17404685 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17404321 | 17404440 | 17404321 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17404067 | 17404218 | 17404067 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17403672 | 17403851 | 17403672 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17403553 | 17403587 | 17403553 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17403302 | 17403464 | 17403302 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17403153 | 17403206 | 17403153 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17402863 | 17402955 | 17402863 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17402516 | 17402658 | 17402516 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17401964 | 17402034 | 17401964 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17401587 | 17401670 | 17401587 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | CDS | 17400676 | 17400794 | 17400676 | ID=Msa1237820-mRNA-1:cds;Parent=Msa1237820-mRNA-1 |
| chr8_2 | three_prime_UTR | 17400130 | 17400675 | 17400130 | ID=Msa1237820-mRNA-1:three_prime_utr;Parent=Msa1237820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
