Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417800 | XP_003601141.2 | 98.787 | 577 | 5 | 1 | 1 | 575 | 1 | 577 | 0.0 | 1191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417800 | sp|Q9LM59|GLYC6_ARATH | 65.882 | 595 | 179 | 8 | 3 | 574 | 5 | 598 | 0.0 | 780 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417800 | G7J467 | 98.787 | 577 | 5 | 1 | 1 | 575 | 1 | 577 | 0.0 | 1191 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092380 | Msa0417800 | 0.842578 | 2.374223e-58 | -8.615850e-47 |
| Msa0417800 | Msa0902800 | 0.844398 | 7.751099e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417800 | MtrunA17_Chr3g0115291 | 98.787 | 577 | 5 | 1 | 1 | 575 | 1 | 577 | 0.0 | 1191 |
| Msa0417800 | MtrunA17_Chr2g0277581 | 68.070 | 570 | 153 | 7 | 28 | 574 | 29 | 592 | 0.0 | 794 |
| Msa0417800 | MtrunA17_Chr3g0121851 | 64.208 | 461 | 157 | 2 | 116 | 573 | 7 | 462 | 0.0 | 632 |
| Msa0417800 | MtrunA17_Chr8g0378091 | 63.774 | 461 | 159 | 2 | 116 | 573 | 7 | 462 | 0.0 | 627 |
| Msa0417800 | MtrunA17_Chr5g0411661 | 53.079 | 471 | 203 | 6 | 114 | 573 | 46 | 509 | 2.23e-169 | 491 |
| Msa0417800 | MtrunA17_Chr5g0428001 | 52.371 | 464 | 206 | 5 | 118 | 573 | 42 | 498 | 4.56e-169 | 489 |
| Msa0417800 | MtrunA17_Chr2g0285171 | 50.000 | 464 | 202 | 6 | 121 | 572 | 87 | 532 | 8.19e-158 | 462 |
| Msa0417800 | MtrunA17_Chr7g0268951 | 59.659 | 176 | 70 | 1 | 146 | 321 | 1 | 175 | 2.68e-63 | 206 |
| Msa0417800 | MtrunA17_Chr1g0186271 | 40.678 | 118 | 55 | 3 | 236 | 353 | 10 | 112 | 1.68e-20 | 92.4 |
| Msa0417800 | MtrunA17_Chr7g0268941 | 33.775 | 151 | 91 | 3 | 432 | 573 | 16 | 166 | 1.30e-17 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0417800 | AT1G22020.2 | 65.882 | 595 | 179 | 8 | 3 | 574 | 5 | 598 | 0.0 | 780 |
| Msa0417800 | AT1G22020.1 | 65.882 | 595 | 179 | 8 | 3 | 574 | 5 | 598 | 0.0 | 780 |
| Msa0417800 | AT1G36370.1 | 65.932 | 590 | 178 | 7 | 3 | 572 | 6 | 592 | 0.0 | 767 |
| Msa0417800 | AT4G13930.1 | 63.636 | 462 | 160 | 2 | 115 | 573 | 6 | 462 | 0.0 | 620 |
| Msa0417800 | AT4G13890.1 | 62.338 | 462 | 166 | 2 | 115 | 573 | 6 | 462 | 0.0 | 605 |
| Msa0417800 | AT4G13890.2 | 63.683 | 391 | 134 | 2 | 115 | 502 | 6 | 391 | 0.0 | 528 |
| Msa0417800 | AT4G37930.1 | 52.708 | 480 | 206 | 7 | 108 | 573 | 36 | 508 | 6.52e-173 | 500 |
| Msa0417800 | AT4G32520.2 | 51.116 | 493 | 217 | 5 | 89 | 572 | 51 | 528 | 4.21e-171 | 496 |
| Msa0417800 | AT4G32520.1 | 51.116 | 493 | 217 | 5 | 89 | 572 | 51 | 528 | 4.21e-171 | 496 |
| Msa0417800 | AT5G26780.1 | 52.802 | 464 | 204 | 5 | 118 | 573 | 52 | 508 | 8.47e-168 | 487 |
| Msa0417800 | AT5G26780.4 | 52.802 | 464 | 204 | 5 | 118 | 573 | 52 | 508 | 8.47e-168 | 487 |
| Msa0417800 | AT5G26780.2 | 51.042 | 480 | 204 | 6 | 118 | 573 | 52 | 524 | 1.58e-163 | 477 |
| Msa0417800 | AT5G26780.3 | 51.042 | 480 | 204 | 6 | 118 | 573 | 52 | 524 | 1.58e-163 | 477 |
Find 168 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAATAAGTGTGCCATTTA+TGG | 0.063511 | 3_2:+65123280 | Msa0417800:CDS |
| TTGATCTTGATTCAAGTAAT+TGG | 0.153213 | 3_2:+65120078 | Msa0417800:CDS |
| GAATCCTGGTGATAGGATTA+TGG | 0.192344 | 3_2:+65120163 | Msa0417800:CDS |
| ATAACTGCACTCGGTTTAAT+TGG | 0.195295 | 3_2:+65122077 | Msa0417800:CDS |
| TCCTGAAATATTTACTATTA+TGG | 0.200046 | 3_2:+65119857 | Msa0417800:CDS |
| AAGCCTTGCTTCCTTGGTTT+TGG | 0.211435 | 3_2:-65121792 | None:intergenic |
| TCCATAATAGTAAATATTTC+AGG | 0.234594 | 3_2:-65119858 | None:intergenic |
| CATTTATGGTTCTATTTCTT+CGG | 0.243918 | 3_2:+65123294 | Msa0417800:CDS |
| GTCAAAGGATTAACTTTATA+AGG | 0.256837 | 3_2:-65120281 | None:intergenic |
| TTCAGATAATGGGTAGTTTC+AGG | 0.272617 | 3_2:-65119406 | None:intergenic |
| ATGCTAGGTCCATACTCTTT+TGG | 0.274895 | 3_2:+65124435 | Msa0417800:three_prime_UTR |
| ATTCTTCCTCAATTCCATTC+AGG | 0.280287 | 3_2:+65119134 | Msa0417800:five_prime_UTR |
| GAAAAGTTGAGACAGTTTAA+AGG | 0.290864 | 3_2:+65119885 | Msa0417800:CDS |
| AATGGGATTATGCGAGGTTT+AGG | 0.290968 | 3_2:+65120393 | Msa0417800:CDS |
| AACCAAACCCTTCTCTTTCA+TGG | 0.293598 | 3_2:+65119595 | Msa0417800:CDS |
| TGATCTTGATTCAAGTAATT+GGG | 0.295376 | 3_2:+65120079 | Msa0417800:CDS |
| CGAAGAAATAGAACCATAAA+TGG | 0.297155 | 3_2:-65123293 | None:intergenic |
| CCGGACATTATTATACTTCC+TGG | 0.298389 | 3_2:+65124253 | Msa0417800:three_prime_UTR |
| TCTTCAAAACCAAAAGAGTA+TGG | 0.322208 | 3_2:-65124444 | None:intergenic |
| GGATTCTAAGGCTGTGAGTT+GGG | 0.334631 | 3_2:+65119809 | Msa0417800:CDS |
| TACAATCGCTAAGTAATAAC+TGG | 0.336822 | 3_2:-65124406 | None:intergenic |
| AGAACAAAGCCTTGCTTCCT+TGG | 0.338559 | 3_2:-65121798 | None:intergenic |
| TGAATCCTGGCATTTCAAAC+TGG | 0.339413 | 3_2:-65124190 | None:intergenic |
| AATCCTGGTGATAGGATTAT+GGG | 0.339991 | 3_2:+65120164 | Msa0417800:CDS |
| TTAGCTGAAGTACATGAATA+AGG | 0.342939 | 3_2:-65120116 | None:intergenic |
| ATGGGTTTGGATTCGGCGTC+TGG | 0.347974 | 3_2:+65120182 | Msa0417800:CDS |
| CAAGGCTTTGTTCTTAATCA+TGG | 0.348449 | 3_2:+65121807 | Msa0417800:CDS |
| AATCTCCTCTTGAAACAAAT+AGG | 0.351775 | 3_2:-65119738 | None:intergenic |
| TGGTGATAGGATTATGGGTT+TGG | 0.361837 | 3_2:+65120169 | Msa0417800:CDS |
| GAGTCACTACCGTGTGTAAC+TGG | 0.365384 | 3_2:+65124635 | Msa0417800:three_prime_UTR |
| GCGTGTCGCGGTGGATTCTA+AGG | 0.372212 | 3_2:+65119797 | Msa0417800:CDS |
| AATGGAATTGAGGAAGAATA+AGG | 0.372507 | 3_2:-65119130 | None:intergenic |
| AGGAGAAAGCTGTGGATTAT+AGG | 0.379628 | 3_2:+65120330 | Msa0417800:CDS |
| AGGTGAAACAATTGATTTCA+TGG | 0.382095 | 3_2:+65119710 | Msa0417800:CDS |
| CAGCCTCTTGATGTCATTGC+AGG | 0.383831 | 3_2:-65124002 | None:intergenic |
| TAGGATTATGGGTTTGGATT+CGG | 0.386569 | 3_2:+65120175 | Msa0417800:CDS |
| TCTCCAACAAATTCATCAAA+TGG | 0.392870 | 3_2:+65119531 | Msa0417800:CDS |
| AGAAATCGGGTTGAGACATT+TGG | 0.395148 | 3_2:+65124164 | Msa0417800:CDS |
| TTGTTTCAAGAGGAGATTAG+AGG | 0.398105 | 3_2:+65119743 | Msa0417800:CDS |
| GACCCATTTGATGAATTTGT+TGG | 0.403227 | 3_2:-65119534 | None:intergenic |
| AATGACTTAGATTATACAAT+AGG | 0.414578 | 3_2:-65124591 | None:intergenic |
| CTGATCAATATACTGATTAC+CGG | 0.415617 | 3_2:-65120018 | None:intergenic |
| CGCCATGAAAGAGAAGGGTT+TGG | 0.419762 | 3_2:-65119597 | None:intergenic |
| ATTTATGGTTCTATTTCTTC+GGG | 0.424350 | 3_2:+65123295 | Msa0417800:CDS |
| CGCAACTTGTTTCAAAGCTA+TGG | 0.434158 | 3_2:-65121928 | None:intergenic |
| TTAACATGAACATTGTTGTC+TGG | 0.437073 | 3_2:-65119636 | None:intergenic |
| GGCTCCCAGTTTGAAATGCC+AGG | 0.438034 | 3_2:+65124185 | Msa0417800:CDS |
| ATAATCTAAGTCATTCGATC+TGG | 0.441928 | 3_2:+65124599 | Msa0417800:three_prime_UTR |
| TGCACAAGCGGGTTTATCAC+TGG | 0.443318 | 3_2:+65119488 | Msa0417800:CDS |
| GAAAATGAGGAATGTGGAAA+AGG | 0.444155 | 3_2:-65119188 | None:intergenic |
| CAGTGGTCTTGTTGCGGCTA+AGG | 0.444969 | 3_2:+65120466 | Msa0417800:CDS |
| GTCATTCGATCTGGATTCAA+TGG | 0.457960 | 3_2:+65124608 | Msa0417800:three_prime_UTR |
| CCAGGAAGTATAATAATGTC+CGG | 0.460057 | 3_2:-65124253 | None:intergenic |
| TCATGGTGGGAAGAAGGTTT+CGG | 0.463885 | 3_2:+65120232 | Msa0417800:CDS |
| CTCTGGGATATAACTGCACT+CGG | 0.464654 | 3_2:+65122068 | Msa0417800:CDS |
| GAAAATTGCAGTTCAGTGTA+TGG | 0.467173 | 3_2:-65124384 | None:intergenic |
| TATAAAGTTAATCCTTTGAC+TGG | 0.469652 | 3_2:+65120284 | Msa0417800:CDS |
| GACATCAAGAGGCTGTTTAG+AGG | 0.471361 | 3_2:+65124010 | Msa0417800:CDS |
| GTTGAAAAGAAAATGCAGAT+TGG | 0.472081 | 3_2:+65122016 | Msa0417800:CDS |
| CTCCAACAAATTCATCAAAT+GGG | 0.472113 | 3_2:+65119532 | Msa0417800:CDS |
| GTAGTTCTTATCCTAGAGAA+TGG | 0.476473 | 3_2:+65120375 | Msa0417800:CDS |
| GAATGCATGAAAACGAAGAA+AGG | 0.479006 | 3_2:-65119213 | None:intergenic |
| ACAATATCACAGTAATCAAA+TGG | 0.479034 | 3_2:-65121705 | None:intergenic |
| CCACCACAAATAAGTATCTT+CGG | 0.482409 | 3_2:-65120353 | None:intergenic |
| AAGTATTCAGAGGGAATGCC+GGG | 0.484305 | 3_2:+65119981 | Msa0417800:CDS |
| TTATACTCATGGTGGGAAGA+AGG | 0.485816 | 3_2:+65120226 | Msa0417800:CDS |
| AGTCATGGTTATTATACTCA+TGG | 0.486337 | 3_2:+65120215 | Msa0417800:CDS |
| TAATAATGTCCGGGTATGAA+TGG | 0.486844 | 3_2:-65124243 | None:intergenic |
| TGGATTCTAAGGCTGTGAGT+TGG | 0.488319 | 3_2:+65119808 | Msa0417800:CDS |
| AATTCAAAACATGGTAAGCC+AGG | 0.491233 | 3_2:-65124271 | None:intergenic |
| TTTGATGAATTTGTTGGAGA+TGG | 0.492254 | 3_2:-65119528 | None:intergenic |
| TGGTTATATTGATTATGATA+AGG | 0.493587 | 3_2:+65120304 | Msa0417800:CDS |
| GCTTTATACCCATCGTTACA+AGG | 0.494852 | 3_2:+65121873 | Msa0417800:CDS |
| GAATCCTGGCATTTCAAACT+GGG | 0.497835 | 3_2:-65124189 | None:intergenic |
| TCCACCGCGACACGCTTCGC+CGG | 0.497839 | 3_2:-65119789 | None:intergenic |
| GAACAAGATGAAGTTGTTGA+TGG | 0.498321 | 3_2:+65119672 | Msa0417800:CDS |
| TAAAATCAATAATTGAATCC+TGG | 0.499060 | 3_2:-65124203 | None:intergenic |
| TGTGAATATGTGAATGTAGC+AGG | 0.501890 | 3_2:-65119089 | None:intergenic |
| TAAAAGACAATACCTCCTCT+TGG | 0.502018 | 3_2:-65121759 | None:intergenic |
| TAAGTATTCAGAGGGAATGC+CGG | 0.502612 | 3_2:+65119980 | Msa0417800:CDS |
| GCACAAGCGGGTTTATCACT+GGG | 0.502741 | 3_2:+65119489 | Msa0417800:CDS |
| GATTCTAAGGCTGTGAGTTG+GGG | 0.507340 | 3_2:+65119810 | Msa0417800:CDS |
| TAGTTCTTATCCTAGAGAAT+GGG | 0.510663 | 3_2:+65120376 | Msa0417800:CDS |
| AAAATGAGGAATGTGGAAAA+GGG | 0.512568 | 3_2:-65119187 | None:intergenic |
| AATATTTACTATTATGGAGA+AGG | 0.513135 | 3_2:+65119863 | Msa0417800:CDS |
| AATGAACCTGAATGGAATTG+AGG | 0.514502 | 3_2:-65119140 | None:intergenic |
| CCGGTATAATATTTCGCTCC+CGG | 0.514845 | 3_2:-65119999 | None:intergenic |
| TATTGATTATGATAAGGTTG+AGG | 0.517586 | 3_2:+65120310 | Msa0417800:CDS |
| ACGAAGAAAGGGTGAAAATG+AGG | 0.518734 | 3_2:-65119201 | None:intergenic |
| AGGCCGAAGATACTTATTTG+TGG | 0.519395 | 3_2:+65120350 | Msa0417800:CDS |
| ACAACCCACAAAAGTCTTCG+AGG | 0.522891 | 3_2:+65121735 | Msa0417800:CDS |
| AGCAGCAATGTGATTGTTGT+GGG | 0.529037 | 3_2:-65121901 | None:intergenic |
| GGTGAAACAATTGATTTCAT+GGG | 0.530175 | 3_2:+65119711 | Msa0417800:CDS |
| ATAACAAGGACAAGAACAAT+GGG | 0.530775 | 3_2:-65119298 | None:intergenic |
| GACTGTCTGATTTAAATCCA+TGG | 0.532946 | 3_2:+65124544 | Msa0417800:three_prime_UTR |
| GATCTTGATTCAAGTAATTG+GGG | 0.535029 | 3_2:+65120080 | Msa0417800:CDS |
| ATGTTCCCTCTGTATAATGC+TGG | 0.535614 | 3_2:-65124081 | None:intergenic |
| TAAACCCGCTTGTGCATCCA+TGG | 0.538895 | 3_2:-65119481 | None:intergenic |
| GAGTGAAGAATGAACCTGAA+TGG | 0.540592 | 3_2:-65119148 | None:intergenic |
| AATGCATGAAAACGAAGAAA+GGG | 0.540977 | 3_2:-65119212 | None:intergenic |
| TCTTCGGGAGGAGTGAGAAT+CGG | 0.543265 | 3_2:+65123310 | Msa0417800:CDS |
| TGATCCATGGATGCACAAGC+GGG | 0.546671 | 3_2:+65119477 | Msa0417800:exon |
| GCGATTGTACAAATTATGCT+AGG | 0.548976 | 3_2:+65124420 | Msa0417800:three_prime_UTR |
| GGTTTGGATTCGGCGTCTGG+TGG | 0.551813 | 3_2:+65120185 | Msa0417800:CDS |
| AATGTCCGGGTATGAATGGA+TGG | 0.552771 | 3_2:-65124239 | None:intergenic |
| TCTGGTGGACATTTGAGTCA+TGG | 0.554954 | 3_2:+65120200 | Msa0417800:CDS |
| TCAGGATCAGCAACACTCAA+AGG | 0.560325 | 3_2:-65119840 | None:intergenic |
| AGGAAGATTGCTGATAAATG+TGG | 0.562025 | 3_2:+65120413 | Msa0417800:CDS |
| CTCGCATAATCCCATTCTCT+AGG | 0.565281 | 3_2:-65120386 | None:intergenic |
| GTATAAAGCATACATGCAGC+AGG | 0.570150 | 3_2:+65121959 | Msa0417800:CDS |
| AATAACAAGGACAAGAACAA+TGG | 0.574061 | 3_2:-65119299 | None:intergenic |
| TGGGGACCTCCTTGTAACGA+TGG | 0.574338 | 3_2:-65121882 | None:intergenic |
| TTGACTAATAAGTATTCAGA+GGG | 0.575405 | 3_2:+65119972 | Msa0417800:CDS |
| TCATATCAGTGGTCTTGTTG+CGG | 0.575798 | 3_2:+65120460 | Msa0417800:CDS |
| TGCATGTATGCTTTATACTC+TGG | 0.576245 | 3_2:-65121954 | None:intergenic |
| GGGCCAAAACCAAGGAAGCA+AGG | 0.577703 | 3_2:+65121789 | Msa0417800:CDS |
| AAGGGTGAAAATGAGGAATG+TGG | 0.580379 | 3_2:-65119194 | None:intergenic |
| TTGATCCATGGATGCACAAG+CGG | 0.585997 | 3_2:+65119476 | Msa0417800:exon |
| ACCGAAAAGGGCCAAAACCA+AGG | 0.591701 | 3_2:+65121781 | Msa0417800:CDS |
| GGGGACCTCCTTGTAACGAT+GGG | 0.593245 | 3_2:-65121881 | None:intergenic |
| ACGTTAAACAAACTCGACCA+TGG | 0.594681 | 3_2:-65124561 | None:intergenic |
| TATGGTTCTATTTCTTCGGG+AGG | 0.595129 | 3_2:+65123298 | Msa0417800:CDS |
| GATGAAGTTGTTGATGGTGA+TGG | 0.596078 | 3_2:+65119678 | Msa0417800:CDS |
| TTTGACTAATAAGTATTCAG+AGG | 0.596390 | 3_2:+65119971 | Msa0417800:CDS |
| AAATGCAGATTGGTTACTGA+TGG | 0.597826 | 3_2:+65122026 | Msa0417800:CDS |
| CAGGAAGTATAATAATGTCC+GGG | 0.598067 | 3_2:-65124252 | None:intergenic |
| GAGCAGCAATGTGATTGTTG+TGG | 0.598188 | 3_2:-65121902 | None:intergenic |
| TCCGGCGAAGCGTGTCGCGG+TGG | 0.601046 | 3_2:+65119788 | Msa0417800:CDS |
| ACTCCTGCAATGACATCAAG+AGG | 0.601746 | 3_2:+65123999 | Msa0417800:CDS |
| GATGGTGATGGTGAAGAAGA+AGG | 0.602741 | 3_2:+65119690 | Msa0417800:CDS |
| ATAACAAGGTAAGTGTGAAG+AGG | 0.603379 | 3_2:-65119265 | None:intergenic |
| AGTAAACGCCATGAAAGAGA+AGG | 0.604955 | 3_2:-65119603 | None:intergenic |
| AAACAATTGATTTCATGGGT+AGG | 0.605913 | 3_2:+65119715 | Msa0417800:CDS |
| CATGGTTATTATACTCATGG+TGG | 0.607119 | 3_2:+65120218 | Msa0417800:CDS |
| ACCTTCCATCCATTCATACC+CGG | 0.609132 | 3_2:+65124234 | Msa0417800:three_prime_UTR |
| TGTTCCGGCGAAGCGTGTCG+CGG | 0.611098 | 3_2:+65119785 | Msa0417800:CDS |
| GTAGGCCTATTTGTTTCAAG+AGG | 0.611633 | 3_2:+65119733 | Msa0417800:CDS |
| ATGGTTATTATACTCATGGT+GGG | 0.612324 | 3_2:+65120219 | Msa0417800:CDS |
| TACAGACAGAAACTATGAGA+AGG | 0.612965 | 3_2:+65123234 | Msa0417800:intron |
| CCGAAGATACTTATTTGTGG+TGG | 0.613875 | 3_2:+65120353 | Msa0417800:CDS |
| CCGGGAGCGAAATATTATAC+CGG | 0.613923 | 3_2:+65119999 | Msa0417800:CDS |
| AGCATTATACAGAGGGAACA+TGG | 0.613990 | 3_2:+65124083 | Msa0417800:CDS |
| TAATCAATATAACCAGTCAA+AGG | 0.615001 | 3_2:-65120296 | None:intergenic |
| GTGAATATGTGAATGTAGCA+GGG | 0.615464 | 3_2:-65119088 | None:intergenic |
| CTAGAGAATGGGATTATGCG+AGG | 0.616599 | 3_2:+65120387 | Msa0417800:CDS |
| TCCGGGTATGAATGGATGGA+AGG | 0.616758 | 3_2:-65124235 | None:intergenic |
| CCTCAGAAGAAAATCTGCCA+TGG | 0.616792 | 3_2:-65124045 | None:intergenic |
| GATTACCAGCATTATACAGA+GGG | 0.630319 | 3_2:+65124076 | Msa0417800:CDS |
| TAAGGTTGAGGAGAAAGCTG+TGG | 0.630384 | 3_2:+65120322 | Msa0417800:CDS |
| TGAATTTGTTGGAGATGGCA+TGG | 0.631230 | 3_2:-65119523 | None:intergenic |
| GTAAACGCCATGAAAGAGAA+GGG | 0.634712 | 3_2:-65119602 | None:intergenic |
| ATGTCTCAACCCGATTTCTG+AGG | 0.637365 | 3_2:-65124160 | None:intergenic |
| ATTCTAAGGCTGTGAGTTGG+GGG | 0.647751 | 3_2:+65119811 | Msa0417800:CDS |
| TGGTGGGAAGAAGGTTTCGG+CGG | 0.648151 | 3_2:+65120235 | Msa0417800:CDS |
| AAACCCATAATCCTATCACC+AGG | 0.648442 | 3_2:-65120167 | None:intergenic |
| AGTCTTCGAGGTCCAAGAGG+AGG | 0.652611 | 3_2:+65121747 | Msa0417800:CDS |
| AAACTATGAGAAGGTTTGTG+AGG | 0.660257 | 3_2:+65123243 | Msa0417800:CDS |
| AACACACAGCCAGTTACACA+CGG | 0.667954 | 3_2:-65124644 | None:intergenic |
| AAAAGTCTTCGAGGTCCAAG+AGG | 0.670998 | 3_2:+65121744 | Msa0417800:CDS |
| TGTGACATGGCTCATATCAG+TGG | 0.681496 | 3_2:+65120449 | Msa0417800:CDS |
| CACAAGCGGGTTTATCACTG+GGG | 0.683010 | 3_2:+65119490 | Msa0417800:CDS |
| AAACAGCAACAACAATAACA+AGG | 0.687576 | 3_2:-65119312 | None:intergenic |
| AGGGCTGTGATGGAAGCACT+TGG | 0.691729 | 3_2:+65119942 | Msa0417800:CDS |
| AGATTACCAGCATTATACAG+AGG | 0.693899 | 3_2:+65124075 | Msa0417800:CDS |
| ACAAGGACAAGAACAATGGG+TGG | 0.704752 | 3_2:-65119295 | None:intergenic |
| GCAGCAATGTGATTGTTGTG+GGG | 0.748236 | 3_2:-65121900 | None:intergenic |
| TGGGTGGTGTGAGAATAACA+AGG | 0.759897 | 3_2:-65119279 | None:intergenic |
| TTATACCCATCGTTACAAGG+AGG | 0.763503 | 3_2:+65121876 | Msa0417800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAAATTGAAGTAAT+GGG | - | chr3_2:65119347-65119366 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAAATTGAAGTAA+TGG | - | chr3_2:65119348-65119367 | None:intergenic | 10.0% |
| !!! | AATAATAAAAACAACTATTT+TGG | + | chr3_2:65121199-65121218 | Msa0417800:intron | 10.0% |
| !!! | AAAAATAATAACTTGTAATA+TGG | - | chr3_2:65122183-65122202 | None:intergenic | 10.0% |
| !!! | AAAATTCCAAAAATAATTTT+AGG | - | chr3_2:65122872-65122891 | None:intergenic | 10.0% |
| !!! | TTTTTCAAAATTCAGATAAT+GGG | - | chr3_2:65119419-65119438 | None:intergenic | 15.0% |
| !!! | TTTTTTCAAAATTCAGATAA+TGG | - | chr3_2:65119420-65119439 | None:intergenic | 15.0% |
| !!! | AAAAATCGATTTTTTTGAAT+TGG | + | chr3_2:65119438-65119457 | Msa0417800:five_prime_UTR | 15.0% |
| !!! | AAAATCGATTTTTTTGAATT+GGG | + | chr3_2:65119439-65119458 | Msa0417800:five_prime_UTR | 15.0% |
| !!! | ACATTTTAGAAAATGAAAAA+AGG | - | chr3_2:65121076-65121095 | None:intergenic | 15.0% |
| !! | AAATGTTATCATAAAGTAAA+CGG | + | chr3_2:65121327-65121346 | Msa0417800:intron | 15.0% |
| !!! | TAATAGTAATTATGATTTTG+AGG | + | chr3_2:65121836-65121855 | Msa0417800:CDS | 15.0% |
| !! | ATATATGAAAAATAAAACAG+AGG | - | chr3_2:65122119-65122138 | None:intergenic | 15.0% |
| !!! | TATTTATGAATTTGTTAGAT+CGG | + | chr3_2:65122702-65122721 | Msa0417800:intron | 15.0% |
| !!! | TTTTAGCCTAAAATTATTTT+TGG | + | chr3_2:65122863-65122882 | Msa0417800:intron | 15.0% |
| !! | ATACATCTATTAAAAAAATG+GGG | - | chr3_2:65122935-65122954 | None:intergenic | 15.0% |
| !! | CATACATCTATTAAAAAAAT+GGG | - | chr3_2:65122936-65122955 | None:intergenic | 15.0% |
| !! | ATAAACATAATAAGATGATA+GGG | - | chr3_2:65123215-65123234 | None:intergenic | 15.0% |
| !! | TATAAACATAATAAGATGAT+AGG | - | chr3_2:65123216-65123235 | None:intergenic | 15.0% |
| !!! | TATTTTAATAGTTTGACTTT+GGG | - | chr3_2:65123358-65123377 | None:intergenic | 15.0% |
| !! | AAATACTAAACTAAATAGTA+TGG | - | chr3_2:65123449-65123468 | None:intergenic | 15.0% |
| !!! | TCTTTTTGAAAAAAAGTTTA+TGG | + | chr3_2:65123811-65123830 | Msa0417800:intron | 15.0% |
| !! | ATGTTTAAACAAATTACTAT+CGG | + | chr3_2:65123913-65123932 | Msa0417800:intron | 15.0% |
| !!! | CTAAAAATCCTTTATTTTAT+TGG | + | chr3_2:65123967-65123986 | Msa0417800:intron | 15.0% |
| !! | TCCTGAAATATTTACTATTA+TGG | + | chr3_2:65119857-65119876 | Msa0417800:CDS | 20.0% |
| !! | TCCATAATAGTAAATATTTC+AGG | - | chr3_2:65119861-65119880 | None:intergenic | 20.0% |
| !! | AATATTTACTATTATGGAGA+AGG | + | chr3_2:65119863-65119882 | Msa0417800:CDS | 20.0% |
| !!! | TGGTTATATTGATTATGATA+AGG | + | chr3_2:65120304-65120323 | Msa0417800:CDS | 20.0% |
| !!! | TTTATGAGTTTTACTTGTTT+TGG | + | chr3_2:65120522-65120541 | Msa0417800:intron | 20.0% |
| !!! | TTATGAGTTTTACTTGTTTT+GGG | + | chr3_2:65120523-65120542 | Msa0417800:intron | 20.0% |
| !!! | AGTGTAATTCTATTTGAAAT+TGG | + | chr3_2:65120857-65120876 | Msa0417800:intron | 20.0% |
| !!! | GTGTAATTCTATTTGAAATT+GGG | + | chr3_2:65120858-65120877 | Msa0417800:intron | 20.0% |
| !! | TTTGTATTAGCAACTTAAAA+TGG | - | chr3_2:65121104-65121123 | None:intergenic | 20.0% |
| !! | AATGTTATCATAAAGTAAAC+GGG | + | chr3_2:65121328-65121347 | Msa0417800:intron | 20.0% |
| !! | TAAAAAAAAAGATTACAGTC+CGG | - | chr3_2:65121533-65121552 | None:intergenic | 20.0% |
| !! | ATAAAAAAGAACAGCATAAT+TGG | - | chr3_2:65121576-65121595 | None:intergenic | 20.0% |
| !!! | CAATTGTTTTTACTTTTTAC+AGG | + | chr3_2:65121671-65121690 | Msa0417800:intron | 20.0% |
| !! | CAAATTAAAAGTGAATATGA+TGG | + | chr3_2:65122147-65122166 | Msa0417800:intron | 20.0% |
| !! | GGACATAATCATAAAATTTA+AGG | - | chr3_2:65122239-65122258 | None:intergenic | 20.0% |
| !!! | CATACACTTTTAATATATCA+GGG | - | chr3_2:65122260-65122279 | None:intergenic | 20.0% |
| !! | TCAAGTAAATGAAAAATTCT+AGG | + | chr3_2:65122410-65122429 | Msa0417800:intron | 20.0% |
| !! | ACTTTCAAATTTGTATCAAT+TGG | + | chr3_2:65122640-65122659 | Msa0417800:intron | 20.0% |
| !! | CAAATTCATAAATAGTTTCT+AGG | - | chr3_2:65122696-65122715 | None:intergenic | 20.0% |
| !!! | ATTTATGAATTTGTTAGATC+GGG | + | chr3_2:65122703-65122722 | Msa0417800:intron | 20.0% |
| !! | CCATACATCTATTAAAAAAA+TGG | - | chr3_2:65122937-65122956 | None:intergenic | 20.0% |
| !!! | CCATTTTTTTAATAGATGTA+TGG | + | chr3_2:65122934-65122953 | Msa0417800:intron | 20.0% |
| !! | TTATAAGACAAAAGGAATAT+AGG | - | chr3_2:65123160-65123179 | None:intergenic | 20.0% |
| !! | GTACAAATTTATAAGACAAA+AGG | - | chr3_2:65123168-65123187 | None:intergenic | 20.0% |
| !!! | CTATTTTAATAGTTTGACTT+TGG | - | chr3_2:65123359-65123378 | None:intergenic | 20.0% |
| !!! | TCAGTTTACGTTAATTTTTT+TGG | + | chr3_2:65123381-65123400 | Msa0417800:intron | 20.0% |
| !! | TAAACTAAATAGTATGGTAA+AGG | - | chr3_2:65123443-65123462 | None:intergenic | 20.0% |
| !! | TTTGTTAAATATGTGGATAT+TGG | - | chr3_2:65123554-65123573 | None:intergenic | 20.0% |
| !! | ATATCCACATATTTAACAAA+TGG | + | chr3_2:65123554-65123573 | Msa0417800:intron | 20.0% |
| !!! | ATTACCATTTGTTAAATATG+TGG | - | chr3_2:65123561-65123580 | None:intergenic | 20.0% |
| !!! | ATGGTAATATCTTATTTTGT+TGG | + | chr3_2:65123573-65123592 | Msa0417800:intron | 20.0% |
| !! | TGTTTAAACAAATTACTATC+GGG | + | chr3_2:65123914-65123933 | Msa0417800:intron | 20.0% |
| !! | TTTAGCAATAATTAAACGTA+AGG | - | chr3_2:65123952-65123971 | None:intergenic | 20.0% |
| !! | TAAAATCAATAATTGAATCC+TGG | - | chr3_2:65124206-65124225 | None:intergenic | 20.0% |
| !! | TGGAAAAATAATTCAAAACA+TGG | - | chr3_2:65124283-65124302 | None:intergenic | 20.0% |
| !!! | TGTTTTGAATTATTTTTCCA+TGG | + | chr3_2:65124283-65124302 | Msa0417800:three_prime_UTR | 20.0% |
| !! | AATGACTTAGATTATACAAT+AGG | - | chr3_2:65124594-65124613 | None:intergenic | 20.0% |
| !!! | TTGAATTGGGTATTTTTGTT+TGG | + | chr3_2:65119452-65119471 | Msa0417800:five_prime_UTR | 25.0% |
| !!! | TGAATTGGGTATTTTTGTTT+GGG | + | chr3_2:65119453-65119472 | Msa0417800:five_prime_UTR | 25.0% |
| ! | TTTGACTAATAAGTATTCAG+AGG | + | chr3_2:65119971-65119990 | Msa0417800:CDS | 25.0% |
| ! | TTGACTAATAAGTATTCAGA+GGG | + | chr3_2:65119972-65119991 | Msa0417800:CDS | 25.0% |
| ! | TTGATCTTGATTCAAGTAAT+TGG | + | chr3_2:65120078-65120097 | Msa0417800:CDS | 25.0% |
| ! | TGATCTTGATTCAAGTAATT+GGG | + | chr3_2:65120079-65120098 | Msa0417800:CDS | 25.0% |
| ! | GTCAAAGGATTAACTTTATA+AGG | - | chr3_2:65120284-65120303 | None:intergenic | 25.0% |
| ! | TATAAAGTTAATCCTTTGAC+TGG | + | chr3_2:65120284-65120303 | Msa0417800:CDS | 25.0% |
| ! | TAATCAATATAACCAGTCAA+AGG | - | chr3_2:65120299-65120318 | None:intergenic | 25.0% |
| !! | TATTGATTATGATAAGGTTG+AGG | + | chr3_2:65120310-65120329 | Msa0417800:CDS | 25.0% |
| ! | TCTCAATTGATACTATTTGA+AGG | + | chr3_2:65120557-65120576 | Msa0417800:intron | 25.0% |
| ! | CTCAATTGATACTATTTGAA+GGG | + | chr3_2:65120558-65120577 | Msa0417800:intron | 25.0% |
| !! | CTTCAGTTTATGCATATTTT+TGG | - | chr3_2:65120990-65121009 | None:intergenic | 25.0% |
| ! | TCATCTTCTCTTCATTATAA+TGG | - | chr3_2:65121149-65121168 | None:intergenic | 25.0% |
| !! | GAACAATTGTGTGAATTTTT+CGG | - | chr3_2:65121239-65121258 | None:intergenic | 25.0% |
| ! | CTATTATCTTCATGTTAGAT+AGG | + | chr3_2:65121270-65121289 | Msa0417800:intron | 25.0% |
| ! | ATGTTATCATAAAGTAAACG+GGG | + | chr3_2:65121329-65121348 | Msa0417800:intron | 25.0% |
| !!! | GCTGTTCTTTTTTATTTGTT+TGG | + | chr3_2:65121581-65121600 | Msa0417800:intron | 25.0% |
| ! | ACAATTGTCAATATACATGA+AGG | - | chr3_2:65121658-65121677 | None:intergenic | 25.0% |
| ! | ACAATATCACAGTAATCAAA+TGG | - | chr3_2:65121708-65121727 | None:intergenic | 25.0% |
| !! | TTTTTCATCATTTAGCAACA+TGG | - | chr3_2:65122208-65122227 | None:intergenic | 25.0% |
| !! | GCATACACTTTTAATATATC+AGG | - | chr3_2:65122261-65122280 | None:intergenic | 25.0% |
| ! | GTGATAAGTTATAAACTTCA+AGG | - | chr3_2:65122519-65122538 | None:intergenic | 25.0% |
| ! | GATACAAATTTGAAAGTCTT+TGG | - | chr3_2:65122637-65122656 | None:intergenic | 25.0% |
| ! | CAGATACTTTGAATTTGAAA+AGG | - | chr3_2:65122896-65122915 | None:intergenic | 25.0% |
| !! | CATTTATGGTTCTATTTCTT+CGG | + | chr3_2:65123294-65123313 | Msa0417800:CDS | 25.0% |
| !! | ATTTATGGTTCTATTTCTTC+GGG | + | chr3_2:65123295-65123314 | Msa0417800:CDS | 25.0% |
| ! | AAGAATAGTATAGAGTAGTA+GGG | - | chr3_2:65123638-65123657 | None:intergenic | 25.0% |
| ! | CTTGAAAAACAAATCTTCTA+TGG | - | chr3_2:65123671-65123690 | None:intergenic | 25.0% |
| !!! | AATGTGTTTTAGGAAACTTT+TGG | + | chr3_2:65123744-65123763 | Msa0417800:intron | 25.0% |
| !!! | ATGTGTTTTAGGAAACTTTT+GGG | + | chr3_2:65123745-65123764 | Msa0417800:intron | 25.0% |
| !! | AGTTTATGGAAAATGAGTTT+TGG | + | chr3_2:65123825-65123844 | Msa0417800:intron | 25.0% |
| !! | GTTTATGGAAAATGAGTTTT+GGG | + | chr3_2:65123826-65123845 | Msa0417800:intron | 25.0% |
| ! | TATACAGTCTCATTTATTCT+TGG | + | chr3_2:65123875-65123894 | Msa0417800:intron | 25.0% |
| ! | ATACAGTCTCATTTATTCTT+GGG | + | chr3_2:65123876-65123895 | Msa0417800:intron | 25.0% |
| ! | CCTGAATACCAATAAAATAA+AGG | - | chr3_2:65123978-65123997 | None:intergenic | 25.0% |
| !!! | CCTTTATTTTATTGGTATTC+AGG | + | chr3_2:65123975-65123994 | Msa0417800:intron | 25.0% |
| !!! | ATATTTTTGACCTCAGAAAT+CGG | + | chr3_2:65124150-65124169 | Msa0417800:CDS | 25.0% |
| AATGGAATTGAGGAAGAATA+AGG | - | chr3_2:65119133-65119152 | None:intergenic | 30.0% | |
| AAAATGAGGAATGTGGAAAA+GGG | - | chr3_2:65119190-65119209 | None:intergenic | 30.0% | |
| AATGCATGAAAACGAAGAAA+GGG | - | chr3_2:65119215-65119234 | None:intergenic | 30.0% | |
| ATAACAAGGACAAGAACAAT+GGG | - | chr3_2:65119301-65119320 | None:intergenic | 30.0% | |
| AATAACAAGGACAAGAACAA+TGG | - | chr3_2:65119302-65119321 | None:intergenic | 30.0% | |
| AAACAGCAACAACAATAACA+AGG | - | chr3_2:65119315-65119334 | None:intergenic | 30.0% | |
| !! | TTTGATGAATTTGTTGGAGA+TGG | - | chr3_2:65119531-65119550 | None:intergenic | 30.0% |
| TCTCCAACAAATTCATCAAA+TGG | + | chr3_2:65119531-65119550 | Msa0417800:CDS | 30.0% | |
| CTCCAACAAATTCATCAAAT+GGG | + | chr3_2:65119532-65119551 | Msa0417800:CDS | 30.0% | |
| !!! | GGTTTGGTTTTGAATTCAAA+TGG | - | chr3_2:65119584-65119603 | None:intergenic | 30.0% |
| TTAACATGAACATTGTTGTC+TGG | - | chr3_2:65119639-65119658 | None:intergenic | 30.0% | |
| ! | AGGTGAAACAATTGATTTCA+TGG | + | chr3_2:65119710-65119729 | Msa0417800:CDS | 30.0% |
| ! | GGTGAAACAATTGATTTCAT+GGG | + | chr3_2:65119711-65119730 | Msa0417800:CDS | 30.0% |
| ! | AAACAATTGATTTCATGGGT+AGG | + | chr3_2:65119715-65119734 | Msa0417800:CDS | 30.0% |
| AATCTCCTCTTGAAACAAAT+AGG | - | chr3_2:65119741-65119760 | None:intergenic | 30.0% | |
| !!! | AACACAACAAAGTTTTGTTC+CGG | + | chr3_2:65119770-65119789 | Msa0417800:CDS | 30.0% |
| GAAAAGTTGAGACAGTTTAA+AGG | + | chr3_2:65119885-65119904 | Msa0417800:CDS | 30.0% | |
| !! | TTCTGAGAATTTTGTTTGCA+GGG | + | chr3_2:65119923-65119942 | Msa0417800:CDS | 30.0% |
| ! | CTGATCAATATACTGATTAC+CGG | - | chr3_2:65120021-65120040 | None:intergenic | 30.0% |
| GATCTTGATTCAAGTAATTG+GGG | + | chr3_2:65120080-65120099 | Msa0417800:CDS | 30.0% | |
| TTAGCTGAAGTACATGAATA+AGG | - | chr3_2:65120119-65120138 | None:intergenic | 30.0% | |
| !!! | GCTAATTTTGCTGTTTATAC+TGG | + | chr3_2:65120134-65120153 | Msa0417800:CDS | 30.0% |
| AGTCATGGTTATTATACTCA+TGG | + | chr3_2:65120215-65120234 | Msa0417800:CDS | 30.0% | |
| ATGGTTATTATACTCATGGT+GGG | + | chr3_2:65120219-65120238 | Msa0417800:CDS | 30.0% | |
| TAGTTCTTATCCTAGAGAAT+GGG | + | chr3_2:65120376-65120395 | Msa0417800:CDS | 30.0% | |
| CTTTGCTTTATAGACATGTT+TGG | + | chr3_2:65120622-65120641 | Msa0417800:intron | 30.0% | |
| AATCACATACACAATAAGAC+AGG | - | chr3_2:65120655-65120674 | None:intergenic | 30.0% | |
| !!! | TAATCTTTGTCTGGTTTTCA+TGG | + | chr3_2:65121019-65121038 | Msa0417800:intron | 30.0% |
| TCATTATAATGGTTCACTTC+AGG | - | chr3_2:65121138-65121157 | None:intergenic | 30.0% | |
| ! | AGATCGAGATGATACATTTT+TGG | + | chr3_2:65121175-65121194 | Msa0417800:intron | 30.0% |
| ! | GGCTTAATATTTCTTTTGGT+GGG | + | chr3_2:65121350-65121369 | Msa0417800:intron | 30.0% |
| ATGTGATTCATAAAAGGACA+AGG | - | chr3_2:65121422-65121441 | None:intergenic | 30.0% | |
| TAGGAGATGTGATTCATAAA+AGG | - | chr3_2:65121428-65121447 | None:intergenic | 30.0% | |
| ACTGTATACGAATGATTACA+AGG | - | chr3_2:65121479-65121498 | None:intergenic | 30.0% | |
| ! | GTATTGTCTTTTACCGAAAA+GGG | + | chr3_2:65121769-65121788 | Msa0417800:CDS | 30.0% |
| GTTGAAAAGAAAATGCAGAT+TGG | + | chr3_2:65122016-65122035 | Msa0417800:CDS | 30.0% | |
| AAATCTATCTTTATCCCACT+AGG | + | chr3_2:65122471-65122490 | Msa0417800:intron | 30.0% | |
| AAGGTAGCAAAATGAAAAGA+AGG | - | chr3_2:65122500-65122519 | None:intergenic | 30.0% | |
| CAAATTTGAAAGTCTTTGGA+TGG | - | chr3_2:65122633-65122652 | None:intergenic | 30.0% | |
| AAACACAACCTTGAGTTAAA+AGG | - | chr3_2:65122798-65122817 | None:intergenic | 30.0% | |
| TGTGTTTACTCGATAAGTAA+TGG | + | chr3_2:65122811-65122830 | Msa0417800:intron | 30.0% | |
| ATAGAGATATTTGACTCAAG+TGG | + | chr3_2:65122981-65123000 | Msa0417800:intron | 30.0% | |
| TATACAAAACTCAACAACAG+AGG | - | chr3_2:65123059-65123078 | None:intergenic | 30.0% | |
| CGAAGAAATAGAACCATAAA+TGG | - | chr3_2:65123296-65123315 | None:intergenic | 30.0% | |
| TGTGGATATTGGATCTTATA+TGG | - | chr3_2:65123543-65123562 | None:intergenic | 30.0% | |
| CAAGAATAGTATAGAGTAGT+AGG | - | chr3_2:65123639-65123658 | None:intergenic | 30.0% | |
| ! | TGGAAGGAAAAATGTGTTTT+AGG | + | chr3_2:65123734-65123753 | Msa0417800:intron | 30.0% |
| !!! | TGTGTTTTAGGAAACTTTTG+GGG | + | chr3_2:65123746-65123765 | Msa0417800:intron | 30.0% |
| ! | ATCATGCAAAGATTTTCTCA+AGG | + | chr3_2:65124109-65124128 | Msa0417800:CDS | 30.0% |
| ! | TCATGCAAAGATTTTCTCAA+GGG | + | chr3_2:65124110-65124129 | Msa0417800:CDS | 30.0% |
| !! | TATTTTTGACCTCAGAAATC+GGG | + | chr3_2:65124151-65124170 | Msa0417800:CDS | 30.0% |
| AAAAATCTGACTAGATACCA+TGG | - | chr3_2:65124303-65124322 | None:intergenic | 30.0% | |
| TACAATCGCTAAGTAATAAC+TGG | - | chr3_2:65124409-65124428 | None:intergenic | 30.0% | |
| TCTTCAAAACCAAAAGAGTA+TGG | - | chr3_2:65124447-65124466 | None:intergenic | 30.0% | |
| !! | TTATTTTGCACTCTTGTTGA+TGG | + | chr3_2:65124493-65124512 | Msa0417800:three_prime_UTR | 30.0% |
| ATAATCTAAGTCATTCGATC+TGG | + | chr3_2:65124599-65124618 | Msa0417800:three_prime_UTR | 30.0% | |
| GTGAATATGTGAATGTAGCA+GGG | - | chr3_2:65119091-65119110 | None:intergenic | 35.0% | |
| TGTGAATATGTGAATGTAGC+AGG | - | chr3_2:65119092-65119111 | None:intergenic | 35.0% | |
| ATTCTTCCTCAATTCCATTC+AGG | + | chr3_2:65119134-65119153 | Msa0417800:five_prime_UTR | 35.0% | |
| AATGAACCTGAATGGAATTG+AGG | - | chr3_2:65119143-65119162 | None:intergenic | 35.0% | |
| GAAAATGAGGAATGTGGAAA+AGG | - | chr3_2:65119191-65119210 | None:intergenic | 35.0% | |
| GAATGCATGAAAACGAAGAA+AGG | - | chr3_2:65119216-65119235 | None:intergenic | 35.0% | |
| ATAACAAGGTAAGTGTGAAG+AGG | - | chr3_2:65119268-65119287 | None:intergenic | 35.0% | |
| !! | TTCAGATAATGGGTAGTTTC+AGG | - | chr3_2:65119409-65119428 | None:intergenic | 35.0% |
| !!! | TTTTTGTTTGGGTTGATCCA+TGG | + | chr3_2:65119464-65119483 | Msa0417800:exon | 35.0% |
| GACCCATTTGATGAATTTGT+TGG | - | chr3_2:65119537-65119556 | None:intergenic | 35.0% | |
| GAACAAGATGAAGTTGTTGA+TGG | + | chr3_2:65119672-65119691 | Msa0417800:CDS | 35.0% | |
| TTGTTTCAAGAGGAGATTAG+AGG | + | chr3_2:65119743-65119762 | Msa0417800:CDS | 35.0% | |
| !! | CTTCTGAGAATTTTGTTTGC+AGG | + | chr3_2:65119922-65119941 | Msa0417800:CDS | 35.0% |
| !!! | TATACTGGTCTTTTGAATCC+TGG | + | chr3_2:65120149-65120168 | Msa0417800:CDS | 35.0% |
| AATCCTGGTGATAGGATTAT+GGG | + | chr3_2:65120164-65120183 | Msa0417800:CDS | 35.0% | |
| TAGGATTATGGGTTTGGATT+CGG | + | chr3_2:65120175-65120194 | Msa0417800:CDS | 35.0% | |
| CATGGTTATTATACTCATGG+TGG | + | chr3_2:65120218-65120237 | Msa0417800:CDS | 35.0% | |
| CCACCACAAATAAGTATCTT+CGG | - | chr3_2:65120356-65120375 | None:intergenic | 35.0% | |
| GTAGTTCTTATCCTAGAGAA+TGG | + | chr3_2:65120375-65120394 | Msa0417800:CDS | 35.0% | |
| AGGAAGATTGCTGATAAATG+TGG | + | chr3_2:65120413-65120432 | Msa0417800:CDS | 35.0% | |
| GAAGGGTAGAGTTAGATATA+TGG | + | chr3_2:65120575-65120594 | Msa0417800:intron | 35.0% | |
| !! | ATTCCTTAGTTCTAGCATGT+AGG | + | chr3_2:65120759-65120778 | Msa0417800:intron | 35.0% |
| !!! | CAAAATGACCTCACCTTTTT+TGG | + | chr3_2:65120794-65120813 | Msa0417800:intron | 35.0% |
| TGATAGGAAAGAGCCAAAAA+AGG | - | chr3_2:65120810-65120829 | None:intergenic | 35.0% | |
| TTTCCTATCATCGAGTTTGT+TGG | + | chr3_2:65120820-65120839 | Msa0417800:intron | 35.0% | |
| ATTCCAACAAACTCGATGAT+AGG | - | chr3_2:65120826-65120845 | None:intergenic | 35.0% | |
| TCCTTCATGAAGGTGATTAA+CGG | - | chr3_2:65120905-65120924 | None:intergenic | 35.0% | |
| ! | GCAATTAGTTTCCTTCATGA+AGG | - | chr3_2:65120915-65120934 | None:intergenic | 35.0% |
| TCATGAAGGAAACTAATTGC+CGG | + | chr3_2:65120915-65120934 | Msa0417800:intron | 35.0% | |
| TTTACTATTTGCCTGTTTGG+TGG | + | chr3_2:65120942-65120961 | Msa0417800:intron | 35.0% | |
| CAATTTACATTCCACCAAAC+AGG | - | chr3_2:65120956-65120975 | None:intergenic | 35.0% | |
| TGGAATGTAAATTGCCTAGA+TGG | + | chr3_2:65120962-65120981 | Msa0417800:intron | 35.0% | |
| !!! | GCATATTTTTGGAACCATCT+AGG | - | chr3_2:65120979-65120998 | None:intergenic | 35.0% |
| TCGTGTATCTAATCTTTGTC+TGG | + | chr3_2:65121010-65121029 | Msa0417800:intron | 35.0% | |
| !!! | TTGTCTGGTTTTCATGGTAA+AGG | + | chr3_2:65121025-65121044 | Msa0417800:intron | 35.0% |
| ! | ACGGGGCTTAATATTTCTTT+TGG | + | chr3_2:65121346-65121365 | Msa0417800:intron | 35.0% |
| ! | GGGCTTAATATTTCTTTTGG+TGG | + | chr3_2:65121349-65121368 | Msa0417800:intron | 35.0% |
| AGTTGTTTGTGAAATGTGAG+TGG | + | chr3_2:65121381-65121400 | Msa0417800:intron | 35.0% | |
| GAATGATTACAAGGATGACT+TGG | - | chr3_2:65121470-65121489 | None:intergenic | 35.0% | |
| AGAAATTTCACGTGTGTAAC+CGG | + | chr3_2:65121511-65121530 | Msa0417800:intron | 35.0% | |
| TTTGTTTGGCGCTTTGTAAA+AGG | + | chr3_2:65121595-65121614 | Msa0417800:intron | 35.0% | |
| TAAAAGACAATACCTCCTCT+TGG | - | chr3_2:65121762-65121781 | None:intergenic | 35.0% | |
| ! | GGTATTGTCTTTTACCGAAA+AGG | + | chr3_2:65121768-65121787 | Msa0417800:CDS | 35.0% |
| !! | CAAGGCTTTGTTCTTAATCA+TGG | + | chr3_2:65121807-65121826 | Msa0417800:CDS | 35.0% |
| TGCATGTATGCTTTATACTC+TGG | - | chr3_2:65121957-65121976 | None:intergenic | 35.0% | |
| ! | AAATGCAGATTGGTTACTGA+TGG | + | chr3_2:65122026-65122045 | Msa0417800:CDS | 35.0% |
| ! | TGACAATCATCTTTTGCTCT+GGG | + | chr3_2:65122052-65122071 | Msa0417800:CDS | 35.0% |
| ATAACTGCACTCGGTTTAAT+TGG | + | chr3_2:65122077-65122096 | Msa0417800:CDS | 35.0% | |
| ATGCACAAGTCAATTCTTTG+TGG | + | chr3_2:65122361-65122380 | Msa0417800:intron | 35.0% | |
| AAGATAAACCTCGCATATCT+TGG | - | chr3_2:65122566-65122585 | None:intergenic | 35.0% | |
| ATGAGCAATAGACAGTTAGT+AGG | + | chr3_2:65122755-65122774 | Msa0417800:intron | 35.0% | |
| TACAGACAGAAACTATGAGA+AGG | + | chr3_2:65123234-65123253 | Msa0417800:intron | 35.0% | |
| AAACTATGAGAAGGTTTGTG+AGG | + | chr3_2:65123243-65123262 | Msa0417800:CDS | 35.0% | |
| !! | CTCAATAAGTGTGCCATTTA+TGG | + | chr3_2:65123280-65123299 | Msa0417800:CDS | 35.0% |
| !! | TAGTATTTTGAGTCCATGCT+TGG | + | chr3_2:65123461-65123480 | Msa0417800:intron | 35.0% |
| ACTCTATACTATTCTTGTGC+TGG | + | chr3_2:65123642-65123661 | Msa0417800:intron | 35.0% | |
| ! | ATTTTTCCTTCCAACAGAGT+GGG | - | chr3_2:65123727-65123746 | None:intergenic | 35.0% |
| ! | TTACTATCGGGTCTTTTGAA+TGG | + | chr3_2:65123926-65123945 | Msa0417800:intron | 35.0% |
| AGATTACCAGCATTATACAG+AGG | + | chr3_2:65124075-65124094 | Msa0417800:CDS | 35.0% | |
| GATTACCAGCATTATACAGA+GGG | + | chr3_2:65124076-65124095 | Msa0417800:CDS | 35.0% | |
| TAATAATGTCCGGGTATGAA+TGG | - | chr3_2:65124246-65124265 | None:intergenic | 35.0% | |
| ! | CAGGAAGTATAATAATGTCC+GGG | - | chr3_2:65124255-65124274 | None:intergenic | 35.0% |
| ! | CCAGGAAGTATAATAATGTC+CGG | - | chr3_2:65124256-65124275 | None:intergenic | 35.0% |
| AATTCAAAACATGGTAAGCC+AGG | - | chr3_2:65124274-65124293 | None:intergenic | 35.0% | |
| GAAAATTGCAGTTCAGTGTA+TGG | - | chr3_2:65124387-65124406 | None:intergenic | 35.0% | |
| GCGATTGTACAAATTATGCT+AGG | + | chr3_2:65124420-65124439 | Msa0417800:three_prime_UTR | 35.0% | |
| GACTGTCTGATTTAAATCCA+TGG | + | chr3_2:65124544-65124563 | Msa0417800:three_prime_UTR | 35.0% | |
| GAAGTTGAACATTGGGGTTT+GGG | - | chr3_2:65119069-65119088 | None:intergenic | 40.0% | |
| TAGCAGGGAAGTTGAACATT+GGG | - | chr3_2:65119076-65119095 | None:intergenic | 40.0% | |
| GAGTGAAGAATGAACCTGAA+TGG | - | chr3_2:65119151-65119170 | None:intergenic | 40.0% | |
| AAGGGTGAAAATGAGGAATG+TGG | - | chr3_2:65119197-65119216 | None:intergenic | 40.0% | |
| ACGAAGAAAGGGTGAAAATG+AGG | - | chr3_2:65119204-65119223 | None:intergenic | 40.0% | |
| !! | TGAATTTGTTGGAGATGGCA+TGG | - | chr3_2:65119526-65119545 | None:intergenic | 40.0% |
| AACCAAACCCTTCTCTTTCA+TGG | + | chr3_2:65119595-65119614 | Msa0417800:CDS | 40.0% | |
| GTAAACGCCATGAAAGAGAA+GGG | - | chr3_2:65119605-65119624 | None:intergenic | 40.0% | |
| AGTAAACGCCATGAAAGAGA+AGG | - | chr3_2:65119606-65119625 | None:intergenic | 40.0% | |
| !! | GATGAAGTTGTTGATGGTGA+TGG | + | chr3_2:65119678-65119697 | Msa0417800:CDS | 40.0% |
| GTAGGCCTATTTGTTTCAAG+AGG | + | chr3_2:65119733-65119752 | Msa0417800:CDS | 40.0% | |
| TAAGTATTCAGAGGGAATGC+CGG | + | chr3_2:65119980-65119999 | Msa0417800:CDS | 40.0% | |
| ! | GTCTTTTGAATCCTGGTGAT+AGG | + | chr3_2:65120156-65120175 | Msa0417800:CDS | 40.0% |
| GAATCCTGGTGATAGGATTA+TGG | + | chr3_2:65120163-65120182 | Msa0417800:CDS | 40.0% | |
| AAACCCATAATCCTATCACC+AGG | - | chr3_2:65120170-65120189 | None:intergenic | 40.0% | |
| TGGTGATAGGATTATGGGTT+TGG | + | chr3_2:65120169-65120188 | Msa0417800:CDS | 40.0% | |
| ! | TTATACTCATGGTGGGAAGA+AGG | + | chr3_2:65120226-65120245 | Msa0417800:CDS | 40.0% |
| ! | AGGAGAAAGCTGTGGATTAT+AGG | + | chr3_2:65120330-65120349 | Msa0417800:CDS | 40.0% |
| AGGCCGAAGATACTTATTTG+TGG | + | chr3_2:65120350-65120369 | Msa0417800:CDS | 40.0% | |
| CCGAAGATACTTATTTGTGG+TGG | + | chr3_2:65120353-65120372 | Msa0417800:CDS | 40.0% | |
| AATGGGATTATGCGAGGTTT+AGG | + | chr3_2:65120393-65120412 | Msa0417800:CDS | 40.0% | |
| !!! | AGCTGTTTTGATGTGTGACA+TGG | + | chr3_2:65120436-65120455 | Msa0417800:CDS | 40.0% |
| !! | TCATATCAGTGGTCTTGTTG+CGG | + | chr3_2:65120460-65120479 | Msa0417800:CDS | 40.0% |
| CTTCCTACATGCTAGAACTA+AGG | - | chr3_2:65120765-65120784 | None:intergenic | 40.0% | |
| !! | CTTAGTTCTAGCATGTAGGA+AGG | + | chr3_2:65120763-65120782 | Msa0417800:intron | 40.0% |
| TCCGTTAATCACCTTCATGA+AGG | + | chr3_2:65120901-65120920 | Msa0417800:intron | 40.0% | |
| CATGAAGGAAACTAATTGCC+GGG | + | chr3_2:65120916-65120935 | Msa0417800:intron | 40.0% | |
| ATGAAGGAAACTAATTGCCG+GGG | + | chr3_2:65120917-65120936 | Msa0417800:intron | 40.0% | |
| GGGTTTACTATTTGCCTGTT+TGG | + | chr3_2:65120939-65120958 | Msa0417800:intron | 40.0% | |
| TGTGAAATGTGAGTGGATAG+TGG | + | chr3_2:65121388-65121407 | Msa0417800:intron | 40.0% | |
| GTGAAATGTGAGTGGATAGT+GGG | + | chr3_2:65121389-65121408 | Msa0417800:intron | 40.0% | |
| !! | AAGGATGACTTGGTTGTTAG+GGG | - | chr3_2:65121460-65121479 | None:intergenic | 40.0% |
| !! | CAAGGATGACTTGGTTGTTA+GGG | - | chr3_2:65121461-65121480 | None:intergenic | 40.0% |
| !! | ACAAGGATGACTTGGTTGTT+AGG | - | chr3_2:65121462-65121481 | None:intergenic | 40.0% |
| AAGTGTGTCAAGTCATGCTA+TGG | - | chr3_2:65121631-65121650 | None:intergenic | 40.0% | |
| !! | AAGACTTTTGTGGGTTGTTG+AGG | - | chr3_2:65121733-65121752 | None:intergenic | 40.0% |
| GCTTTATACCCATCGTTACA+AGG | + | chr3_2:65121873-65121892 | Msa0417800:CDS | 40.0% | |
| TTATACCCATCGTTACAAGG+AGG | + | chr3_2:65121876-65121895 | Msa0417800:CDS | 40.0% | |
| AGCAGCAATGTGATTGTTGT+GGG | - | chr3_2:65121904-65121923 | None:intergenic | 40.0% | |
| ! | CGCAACTTGTTTCAAAGCTA+TGG | - | chr3_2:65121931-65121950 | None:intergenic | 40.0% |
| GTATAAAGCATACATGCAGC+AGG | + | chr3_2:65121959-65121978 | Msa0417800:CDS | 40.0% | |
| ! | CTGACAATCATCTTTTGCTC+TGG | + | chr3_2:65122051-65122070 | Msa0417800:CDS | 40.0% |
| TGAAAAGAAGGCAACCTAGT+GGG | - | chr3_2:65122488-65122507 | None:intergenic | 40.0% | |
| ATGAAAAGAAGGCAACCTAG+TGG | - | chr3_2:65122489-65122508 | None:intergenic | 40.0% | |
| TATCTTGGCAAATAGTCCTC+AGG | - | chr3_2:65122551-65122570 | None:intergenic | 40.0% | |
| ACTATTTGCCAAGATATGCG+AGG | + | chr3_2:65122555-65122574 | Msa0417800:intron | 40.0% | |
| AGTTAGTAGGAGTCTCTGTA+TGG | + | chr3_2:65122768-65122787 | Msa0417800:intron | 40.0% | |
| GTTAGTAGGAGTCTCTGTAT+GGG | + | chr3_2:65122769-65122788 | Msa0417800:intron | 40.0% | |
| !! | ATGGGTGTCCTTTTAACTCA+AGG | + | chr3_2:65122787-65122806 | Msa0417800:intron | 40.0% |
| GAGATATTTGACTCAAGTGG+TGG | + | chr3_2:65122984-65123003 | Msa0417800:intron | 40.0% | |
| ! | TATGGTTCTATTTCTTCGGG+AGG | + | chr3_2:65123298-65123317 | Msa0417800:CDS | 40.0% |
| ! | TTTTTCCTTCCAACAGAGTG+GGG | - | chr3_2:65123726-65123745 | None:intergenic | 40.0% |
| ! | CATTTTTCCTTCCAACAGAG+TGG | - | chr3_2:65123728-65123747 | None:intergenic | 40.0% |
| ! | CATGGCAGATTTTCTTCTGA+GGG | + | chr3_2:65124046-65124065 | Msa0417800:CDS | 40.0% |
| ATGTTCCCTCTGTATAATGC+TGG | - | chr3_2:65124084-65124103 | None:intergenic | 40.0% | |
| AGCATTATACAGAGGGAACA+TGG | + | chr3_2:65124083-65124102 | Msa0417800:CDS | 40.0% | |
| !! | AGAAATCGGGTTGAGACATT+TGG | + | chr3_2:65124164-65124183 | Msa0417800:CDS | 40.0% |
| GAATCCTGGCATTTCAAACT+GGG | - | chr3_2:65124192-65124211 | None:intergenic | 40.0% | |
| TGAATCCTGGCATTTCAAAC+TGG | - | chr3_2:65124193-65124212 | None:intergenic | 40.0% | |
| CCGGACATTATTATACTTCC+TGG | + | chr3_2:65124253-65124272 | Msa0417800:three_prime_UTR | 40.0% | |
| ! | ATGCTAGGTCCATACTCTTT+TGG | + | chr3_2:65124435-65124454 | Msa0417800:three_prime_UTR | 40.0% |
| ACGTTAAACAAACTCGACCA+TGG | - | chr3_2:65124564-65124583 | None:intergenic | 40.0% | |
| GTCATTCGATCTGGATTCAA+TGG | + | chr3_2:65124608-65124627 | Msa0417800:three_prime_UTR | 40.0% | |
| ! | GGTTTGGGTTTGGTACTCTT+TGG | - | chr3_2:65119054-65119073 | None:intergenic | 45.0% |
| ! | TGAACATTGGGGTTTGGGTT+TGG | - | chr3_2:65119064-65119083 | None:intergenic | 45.0% |
| GGAAGTTGAACATTGGGGTT+TGG | - | chr3_2:65119070-65119089 | None:intergenic | 45.0% | |
| AGCAGGGAAGTTGAACATTG+GGG | - | chr3_2:65119075-65119094 | None:intergenic | 45.0% | |
| GTAGCAGGGAAGTTGAACAT+TGG | - | chr3_2:65119077-65119096 | None:intergenic | 45.0% | |
| TGGGTGGTGTGAGAATAACA+AGG | - | chr3_2:65119282-65119301 | None:intergenic | 45.0% | |
| ACAAGGACAAGAACAATGGG+TGG | - | chr3_2:65119298-65119317 | None:intergenic | 45.0% | |
| TTGATCCATGGATGCACAAG+CGG | + | chr3_2:65119476-65119495 | Msa0417800:exon | 45.0% | |
| !! | GATGGTGATGGTGAAGAAGA+AGG | + | chr3_2:65119690-65119709 | Msa0417800:CDS | 45.0% |
| !! | TGGATTCTAAGGCTGTGAGT+TGG | + | chr3_2:65119808-65119827 | Msa0417800:CDS | 45.0% |
| !! | GGATTCTAAGGCTGTGAGTT+GGG | + | chr3_2:65119809-65119828 | Msa0417800:CDS | 45.0% |
| !! | GATTCTAAGGCTGTGAGTTG+GGG | + | chr3_2:65119810-65119829 | Msa0417800:CDS | 45.0% |
| !! | ATTCTAAGGCTGTGAGTTGG+GGG | + | chr3_2:65119811-65119830 | Msa0417800:CDS | 45.0% |
| TCAGGATCAGCAACACTCAA+AGG | - | chr3_2:65119843-65119862 | None:intergenic | 45.0% | |
| !! | TTTTGTTTGCAGGGCTGTGA+TGG | + | chr3_2:65119932-65119951 | Msa0417800:CDS | 45.0% |
| AAGTATTCAGAGGGAATGCC+GGG | + | chr3_2:65119981-65120000 | Msa0417800:CDS | 45.0% | |
| CCGGTATAATATTTCGCTCC+CGG | - | chr3_2:65120002-65120021 | None:intergenic | 45.0% | |
| CCGGGAGCGAAATATTATAC+CGG | + | chr3_2:65119999-65120018 | Msa0417800:CDS | 45.0% | |
| ! | TCTGGTGGACATTTGAGTCA+TGG | + | chr3_2:65120200-65120219 | Msa0417800:CDS | 45.0% |
| ! | TCATGGTGGGAAGAAGGTTT+CGG | + | chr3_2:65120232-65120251 | Msa0417800:CDS | 45.0% |
| TAAGGTTGAGGAGAAAGCTG+TGG | + | chr3_2:65120322-65120341 | Msa0417800:CDS | 45.0% | |
| CTCGCATAATCCCATTCTCT+AGG | - | chr3_2:65120389-65120408 | None:intergenic | 45.0% | |
| CTAGAGAATGGGATTATGCG+AGG | + | chr3_2:65120387-65120406 | Msa0417800:CDS | 45.0% | |
| TGTGACATGGCTCATATCAG+TGG | + | chr3_2:65120449-65120468 | Msa0417800:CDS | 45.0% | |
| GTTCTAGCATGTAGGAAGGA+TGG | + | chr3_2:65120767-65120786 | Msa0417800:intron | 45.0% | |
| GGAAAGAGCCAAAAAAGGTG+AGG | - | chr3_2:65120805-65120824 | None:intergenic | 45.0% | |
| TGAAGGAAACTAATTGCCGG+GGG | + | chr3_2:65120918-65120937 | Msa0417800:intron | 45.0% | |
| ! | TTGTTAGGGGTGTGGGATAT+AGG | - | chr3_2:65121447-65121466 | None:intergenic | 45.0% |
| ACAACCCACAAAAGTCTTCG+AGG | + | chr3_2:65121735-65121754 | Msa0417800:CDS | 45.0% | |
| ! | TGGACCTCGAAGACTTTTGT+GGG | - | chr3_2:65121742-65121761 | None:intergenic | 45.0% |
| ! | TTGGACCTCGAAGACTTTTG+TGG | - | chr3_2:65121743-65121762 | None:intergenic | 45.0% |
| AAAAGTCTTCGAGGTCCAAG+AGG | + | chr3_2:65121744-65121763 | Msa0417800:CDS | 45.0% | |
| !!! | TCCTTGGTTTTGGCCCTTTT+CGG | - | chr3_2:65121785-65121804 | None:intergenic | 45.0% |
| ! | AAGCCTTGCTTCCTTGGTTT+TGG | - | chr3_2:65121795-65121814 | None:intergenic | 45.0% |
| AGAACAAAGCCTTGCTTCCT+TGG | - | chr3_2:65121801-65121820 | None:intergenic | 45.0% | |
| GCAGCAATGTGATTGTTGTG+GGG | - | chr3_2:65121903-65121922 | None:intergenic | 45.0% | |
| GAGCAGCAATGTGATTGTTG+TGG | - | chr3_2:65121905-65121924 | None:intergenic | 45.0% | |
| !! | CTCTGGGATATAACTGCACT+CGG | + | chr3_2:65122068-65122087 | Msa0417800:CDS | 45.0% |
| TTATCACTCTTCTCCTCCTG+AGG | + | chr3_2:65122532-65122551 | Msa0417800:intron | 45.0% | |
| ATTTGACTCAAGTGGTGGCA+AGG | + | chr3_2:65122989-65123008 | Msa0417800:intron | 45.0% | |
| CAAAACTCAACAACAGAGGC+TGG | - | chr3_2:65123055-65123074 | None:intergenic | 45.0% | |
| AAACAGCGACAAACCAAGCA+TGG | - | chr3_2:65123477-65123496 | None:intergenic | 45.0% | |
| ACTCCTGCAATGACATCAAG+AGG | + | chr3_2:65123999-65124018 | Msa0417800:CDS | 45.0% | |
| !!! | AGAGGACGATTTTGAGACCA+TGG | + | chr3_2:65124028-65124047 | Msa0417800:CDS | 45.0% |
| CCTCAGAAGAAAATCTGCCA+TGG | - | chr3_2:65124048-65124067 | None:intergenic | 45.0% | |
| ! | CCATGGCAGATTTTCTTCTG+AGG | + | chr3_2:65124045-65124064 | Msa0417800:CDS | 45.0% |
| ATGTCTCAACCCGATTTCTG+AGG | - | chr3_2:65124163-65124182 | None:intergenic | 45.0% | |
| ACCTTCCATCCATTCATACC+CGG | + | chr3_2:65124234-65124253 | Msa0417800:three_prime_UTR | 45.0% | |
| AATGTCCGGGTATGAATGGA+TGG | - | chr3_2:65124242-65124261 | None:intergenic | 45.0% | |
| TGATCCATGGATGCACAAGC+GGG | + | chr3_2:65119477-65119496 | Msa0417800:exon | 50.0% | |
| TAAACCCGCTTGTGCATCCA+TGG | - | chr3_2:65119484-65119503 | None:intergenic | 50.0% | |
| ! | TGCACAAGCGGGTTTATCAC+TGG | + | chr3_2:65119488-65119507 | Msa0417800:CDS | 50.0% |
| ! | GCACAAGCGGGTTTATCACT+GGG | + | chr3_2:65119489-65119508 | Msa0417800:CDS | 50.0% |
| ! | CACAAGCGGGTTTATCACTG+GGG | + | chr3_2:65119490-65119509 | Msa0417800:CDS | 50.0% |
| CGCCATGAAAGAGAAGGGTT+TGG | - | chr3_2:65119600-65119619 | None:intergenic | 50.0% | |
| GAAGGAAACTAATTGCCGGG+GGG | + | chr3_2:65120919-65120938 | Msa0417800:intron | 50.0% | |
| CAGGCAAATAGTAAACCCCC+CGG | - | chr3_2:65120937-65120956 | None:intergenic | 50.0% | |
| ! | GACTTGGTTGTTAGGGGTGT+GGG | - | chr3_2:65121454-65121473 | None:intergenic | 50.0% |
| !! | TGACTTGGTTGTTAGGGGTG+TGG | - | chr3_2:65121455-65121474 | None:intergenic | 50.0% |
| ACCGAAAAGGGCCAAAACCA+AGG | + | chr3_2:65121781-65121800 | Msa0417800:CDS | 50.0% | |
| CTTGGCAAATAGTCCTCAGG+AGG | - | chr3_2:65122548-65122567 | None:intergenic | 50.0% | |
| TCTTCGGGAGGAGTGAGAAT+CGG | + | chr3_2:65123310-65123329 | Msa0417800:CDS | 50.0% | |
| TTATGCCCCACTCTGTTGGA+AGG | + | chr3_2:65123718-65123737 | Msa0417800:intron | 50.0% | |
| TCCGGGTATGAATGGATGGA+AGG | - | chr3_2:65124238-65124257 | None:intergenic | 50.0% | |
| GAGTCACTACCGTGTGTAAC+TGG | + | chr3_2:65124635-65124654 | Msa0417800:three_prime_UTR | 50.0% | |
| !! | AGGGCTGTGATGGAAGCACT+TGG | + | chr3_2:65119942-65119961 | Msa0417800:CDS | 55.0% |
| ATGGGTTTGGATTCGGCGTC+TGG | + | chr3_2:65120182-65120201 | Msa0417800:CDS | 55.0% | |
| TGGTGGGAAGAAGGTTTCGG+CGG | + | chr3_2:65120235-65120254 | Msa0417800:CDS | 55.0% | |
| !! | CAGTGGTCTTGTTGCGGCTA+AGG | + | chr3_2:65120466-65120485 | Msa0417800:CDS | 55.0% |
| AGTCTTCGAGGTCCAAGAGG+AGG | + | chr3_2:65121747-65121766 | Msa0417800:CDS | 55.0% | |
| GGGCCAAAACCAAGGAAGCA+AGG | + | chr3_2:65121789-65121808 | Msa0417800:CDS | 55.0% | |
| GGGGACCTCCTTGTAACGAT+GGG | - | chr3_2:65121884-65121903 | None:intergenic | 55.0% | |
| TGGGGACCTCCTTGTAACGA+TGG | - | chr3_2:65121885-65121904 | None:intergenic | 55.0% | |
| GCTCTTATGCCCCACTCTGT+TGG | + | chr3_2:65123714-65123733 | Msa0417800:intron | 55.0% | |
| TTGGGGAAGCGAAGATGACG+AGG | + | chr3_2:65123763-65123782 | Msa0417800:intron | 55.0% | |
| ! | GGCTCCCAGTTTGAAATGCC+AGG | + | chr3_2:65124185-65124204 | Msa0417800:CDS | 55.0% |
| ! | GCGTGTCGCGGTGGATTCTA+AGG | + | chr3_2:65119797-65119816 | Msa0417800:CDS | 60.0% |
| GGTTTGGATTCGGCGTCTGG+TGG | + | chr3_2:65120185-65120204 | Msa0417800:CDS | 60.0% | |
| TGTTCCGGCGAAGCGTGTCG+CGG | + | chr3_2:65119785-65119804 | Msa0417800:CDS | 65.0% | |
| TCCACCGCGACACGCTTCGC+CGG | - | chr3_2:65119792-65119811 | None:intergenic | 70.0% | |
| TCCGGCGAAGCGTGTCGCGG+TGG | + | chr3_2:65119788-65119807 | Msa0417800:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 65119023 | 65124660 | 65119023 | ID=Msa0417800;Name=Msa0417800 |
| chr3_2 | mRNA | 65119023 | 65124660 | 65119023 | ID=Msa0417800-mRNA-1;Parent=Msa0417800;Name=Msa0417800-mRNA-1;_AED=0.04;_eAED=0.04;_QI=439|1|1|1|0.75|0.6|5|440|575 |
| chr3_2 | exon | 65119023 | 65119057 | 65119023 | ID=Msa0417800-mRNA-1:exon:14615;Parent=Msa0417800-mRNA-1 |
| chr3_2 | exon | 65119079 | 65120487 | 65119079 | ID=Msa0417800-mRNA-1:exon:14616;Parent=Msa0417800-mRNA-1 |
| chr3_2 | exon | 65121693 | 65122098 | 65121693 | ID=Msa0417800-mRNA-1:exon:14617;Parent=Msa0417800-mRNA-1 |
| chr3_2 | exon | 65123239 | 65123331 | 65123239 | ID=Msa0417800-mRNA-1:exon:14618;Parent=Msa0417800-mRNA-1 |
| chr3_2 | exon | 65123997 | 65124660 | 65123997 | ID=Msa0417800-mRNA-1:exon:14619;Parent=Msa0417800-mRNA-1 |
| chr3_2 | five_prime_UTR | 65119023 | 65119057 | 65119023 | ID=Msa0417800-mRNA-1:five_prime_utr;Parent=Msa0417800-mRNA-1 |
| chr3_2 | five_prime_UTR | 65119079 | 65119482 | 65119079 | ID=Msa0417800-mRNA-1:five_prime_utr;Parent=Msa0417800-mRNA-1 |
| chr3_2 | CDS | 65119483 | 65120487 | 65119483 | ID=Msa0417800-mRNA-1:cds;Parent=Msa0417800-mRNA-1 |
| chr3_2 | CDS | 65121693 | 65122098 | 65121693 | ID=Msa0417800-mRNA-1:cds;Parent=Msa0417800-mRNA-1 |
| chr3_2 | CDS | 65123239 | 65123331 | 65123239 | ID=Msa0417800-mRNA-1:cds;Parent=Msa0417800-mRNA-1 |
| chr3_2 | CDS | 65123997 | 65124220 | 65123997 | ID=Msa0417800-mRNA-1:cds;Parent=Msa0417800-mRNA-1 |
| chr3_2 | three_prime_UTR | 65124221 | 65124660 | 65124221 | ID=Msa0417800-mRNA-1:three_prime_utr;Parent=Msa0417800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
