Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092380 | sp|Q9LM59|GLYC6_ARATH | 65.882 | 595 | 179 | 8 | 3 | 574 | 5 | 598 | 0.0 | 780 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092380 | G7J467 | 98.787 | 577 | 5 | 1 | 1 | 575 | 1 | 577 | 0.0 | 1191 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092380 | Msa0362060 | 0.828729 | 7.647434e-55 | -8.615850e-47 |
| Msa0092380 | Msa0370310 | 0.912265 | 2.373604e-83 | -8.615850e-47 |
| Msa0092380 | Msa0370870 | 0.807174 | 5.748585e-50 | -8.615850e-47 |
| Msa0092380 | Msa0408750 | 0.802143 | 6.452622e-49 | -8.615850e-47 |
| Msa0092380 | Msa0417800 | 0.842578 | 2.374223e-58 | -8.615850e-47 |
| Msa0092380 | Msa0475050 | 0.808758 | 2.646755e-50 | -8.615850e-47 |
| Msa0092380 | Msa0522120 | 0.812527 | 4.054146e-51 | -8.615850e-47 |
| Msa0092380 | Msa0902800 | 0.998387 | 1.331619e-263 | -8.615850e-47 |
| Msa0092380 | Msa0982590 | 0.814103 | 1.827160e-51 | -8.615850e-47 |
| Msa0092380 | Msa1021390 | 0.824833 | 6.513489e-54 | -8.615850e-47 |
| Msa0092380 | Msa1182640 | 0.829609 | 4.677434e-55 | -8.615850e-47 |
| Msa0092380 | Msa1272520 | 0.802222 | 6.215676e-49 | -8.615850e-47 |
| Msa0092380 | Msa1310660 | 0.819074 | 1.405856e-52 | -8.615850e-47 |
| Msa0092380 | Msa1368180 | 0.805736 | 1.155834e-49 | -8.615850e-47 |
| Msa0092380 | Msa1404720 | 0.801142 | 1.035410e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092380 | MtrunA17_Chr3g0115291 | 98.787 | 577 | 5 | 1 | 1 | 575 | 1 | 577 | 0.0 | 1191 |
| Msa0092380 | MtrunA17_Chr2g0277581 | 68.070 | 570 | 153 | 7 | 28 | 574 | 29 | 592 | 0.0 | 794 |
| Msa0092380 | MtrunA17_Chr3g0121851 | 64.208 | 461 | 157 | 2 | 116 | 573 | 7 | 462 | 0.0 | 632 |
| Msa0092380 | MtrunA17_Chr8g0378091 | 63.774 | 461 | 159 | 2 | 116 | 573 | 7 | 462 | 0.0 | 627 |
| Msa0092380 | MtrunA17_Chr5g0411661 | 53.079 | 471 | 203 | 6 | 114 | 573 | 46 | 509 | 2.23e-169 | 491 |
| Msa0092380 | MtrunA17_Chr5g0428001 | 52.371 | 464 | 206 | 5 | 118 | 573 | 42 | 498 | 4.56e-169 | 489 |
| Msa0092380 | MtrunA17_Chr2g0285171 | 50.000 | 464 | 202 | 6 | 121 | 572 | 87 | 532 | 8.19e-158 | 462 |
| Msa0092380 | MtrunA17_Chr7g0268951 | 59.659 | 176 | 70 | 1 | 146 | 321 | 1 | 175 | 2.68e-63 | 206 |
| Msa0092380 | MtrunA17_Chr1g0186271 | 40.678 | 118 | 55 | 3 | 236 | 353 | 10 | 112 | 1.68e-20 | 92.4 |
| Msa0092380 | MtrunA17_Chr7g0268941 | 33.775 | 151 | 91 | 3 | 432 | 573 | 16 | 166 | 1.30e-17 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092380 | AT1G22020.2 | 65.882 | 595 | 179 | 8 | 3 | 574 | 5 | 598 | 0.0 | 780 |
| Msa0092380 | AT1G22020.1 | 65.882 | 595 | 179 | 8 | 3 | 574 | 5 | 598 | 0.0 | 780 |
| Msa0092380 | AT1G36370.1 | 65.932 | 590 | 178 | 7 | 3 | 572 | 6 | 592 | 0.0 | 767 |
| Msa0092380 | AT4G13930.1 | 63.636 | 462 | 160 | 2 | 115 | 573 | 6 | 462 | 0.0 | 620 |
| Msa0092380 | AT4G13890.1 | 62.338 | 462 | 166 | 2 | 115 | 573 | 6 | 462 | 0.0 | 605 |
| Msa0092380 | AT4G13890.2 | 63.683 | 391 | 134 | 2 | 115 | 502 | 6 | 391 | 0.0 | 528 |
| Msa0092380 | AT4G37930.1 | 52.708 | 480 | 206 | 7 | 108 | 573 | 36 | 508 | 6.52e-173 | 500 |
| Msa0092380 | AT4G32520.2 | 51.116 | 493 | 217 | 5 | 89 | 572 | 51 | 528 | 4.21e-171 | 496 |
| Msa0092380 | AT4G32520.1 | 51.116 | 493 | 217 | 5 | 89 | 572 | 51 | 528 | 4.21e-171 | 496 |
| Msa0092380 | AT5G26780.1 | 52.802 | 464 | 204 | 5 | 118 | 573 | 52 | 508 | 8.47e-168 | 487 |
| Msa0092380 | AT5G26780.4 | 52.802 | 464 | 204 | 5 | 118 | 573 | 52 | 508 | 8.47e-168 | 487 |
| Msa0092380 | AT5G26780.2 | 51.042 | 480 | 204 | 6 | 118 | 573 | 52 | 524 | 1.58e-163 | 477 |
| Msa0092380 | AT5G26780.3 | 51.042 | 480 | 204 | 6 | 118 | 573 | 52 | 524 | 1.58e-163 | 477 |
Find 172 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAATAAGTGTGCCATTTA+TGG | 0.063511 | 1_2:-74796862 | Msa0092380:CDS |
| AATTACATGACAATGTTATT+TGG | 0.151216 | 1_2:-74795680 | Msa0092380:three_prime_UTR |
| TTGATCTTGATTCAAGTAAT+TGG | 0.153213 | 1_2:-74800060 | Msa0092380:CDS |
| GAATCCTGGTGATAGGATTA+TGG | 0.192344 | 1_2:-74799975 | Msa0092380:CDS |
| ATAACTGCACTCGGTTTAAT+TGG | 0.195295 | 1_2:-74798056 | Msa0092380:intron |
| TCCTGAAATATTTACTATTA+TGG | 0.200046 | 1_2:-74800281 | Msa0092380:CDS |
| AAGCCTTGCTTCCTTGGTTT+TGG | 0.211435 | 1_2:+74798341 | None:intergenic |
| TCCATAATAGTAAATATTTC+AGG | 0.234594 | 1_2:+74800280 | None:intergenic |
| ATGCTAGGTCCATACTCTTT+TGG | 0.274895 | 1_2:-74795723 | Msa0092380:three_prime_UTR |
| AATAACAAGGACAACAATAA+TGG | 0.285250 | 1_2:+74800824 | None:intergenic |
| GAAAAGTTGAGACAGTTTAA+AGG | 0.290864 | 1_2:-74800253 | Msa0092380:CDS |
| AATGGGATTATGCGAGGTTT+AGG | 0.290968 | 1_2:-74799745 | Msa0092380:CDS |
| AACCAAACCCTTCTCTTTCA+TGG | 0.293598 | 1_2:-74800543 | Msa0092380:CDS |
| ATTATCCCTCAATTCCATTC+AGG | 0.293859 | 1_2:-74800989 | Msa0092380:five_prime_UTR |
| TGATCTTGATTCAAGTAATT+GGG | 0.295376 | 1_2:-74800059 | Msa0092380:CDS |
| CCGGACATTATTATACTTCC+TGG | 0.298389 | 1_2:-74795902 | Msa0092380:three_prime_UTR |
| ATTTATGGTTCTATTTCTTC+TGG | 0.309448 | 1_2:-74796847 | Msa0092380:CDS |
| GTCAAAGGATTAACCTTATA+AGG | 0.310916 | 1_2:+74799857 | None:intergenic |
| AGAAGAAATAGAACCATAAA+TGG | 0.313224 | 1_2:+74796849 | None:intergenic |
| GGATTCTAAGGCTGTGAGTT+GGG | 0.334631 | 1_2:-74800329 | Msa0092380:CDS |
| TACAATCGCTAAGTAATAAC+TGG | 0.336822 | 1_2:+74795752 | None:intergenic |
| AGAACAAAGCCTTGCTTCCT+TGG | 0.338559 | 1_2:+74798335 | None:intergenic |
| AATGGAATTGAGGGATAATA+AGG | 0.339321 | 1_2:+74800993 | None:intergenic |
| TGAATCCTGGCATTTCAAAC+TGG | 0.339413 | 1_2:+74795965 | None:intergenic |
| AATCCTGGTGATAGGATTAT+GGG | 0.339991 | 1_2:-74799974 | Msa0092380:CDS |
| TTAGCTGAAGTACATGAATA+AGG | 0.342939 | 1_2:+74800022 | None:intergenic |
| ATGGGTTTGGATTCGGCGTC+TGG | 0.347974 | 1_2:-74799956 | Msa0092380:CDS |
| CAAGGCTTTGTTCTTAATCA+TGG | 0.348449 | 1_2:-74798326 | Msa0092380:CDS |
| AATCTCCTCTTGAAACAAAT+AGG | 0.351775 | 1_2:+74800400 | None:intergenic |
| TGGTGATAGGATTATGGGTT+TGG | 0.361837 | 1_2:-74799969 | Msa0092380:CDS |
| GAGTCACTACCGTGTGTAAC+TGG | 0.365384 | 1_2:-74795525 | Msa0092380:three_prime_UTR |
| GCGTGTCGCGGTGGATTCTA+AGG | 0.372212 | 1_2:-74800341 | Msa0092380:CDS |
| TTATTTGGCACTCTTGTTGA+TGG | 0.374004 | 1_2:-74795665 | Msa0092380:three_prime_UTR |
| TCTCCAAAACCAAAAGAGTA+TGG | 0.374145 | 1_2:+74795714 | None:intergenic |
| AGGAGAAAGCTGTGGATTAT+AGG | 0.379628 | 1_2:-74799808 | Msa0092380:CDS |
| AGGTGAAACAATTGATTTCA+TGG | 0.382095 | 1_2:-74800428 | Msa0092380:CDS |
| CAGCCTCTTGATGTCATTGC+AGG | 0.383831 | 1_2:+74796153 | None:intergenic |
| TAGGATTATGGGTTTGGATT+CGG | 0.386569 | 1_2:-74799963 | Msa0092380:CDS |
| TCTCCAACAAATTCATCAAA+TGG | 0.392870 | 1_2:-74800607 | Msa0092380:CDS |
| AGAAATCGGGTTGAGACATT+TGG | 0.395148 | 1_2:-74795991 | Msa0092380:CDS |
| TTGTTTCAAGAGGAGATTAG+AGG | 0.398105 | 1_2:-74800395 | Msa0092380:CDS |
| GACCCATTTGATGAATTTGT+TGG | 0.403227 | 1_2:+74800604 | None:intergenic |
| CTGATCAATATACTGATTAC+CGG | 0.415617 | 1_2:+74800120 | None:intergenic |
| CGCCATGAAAGAGAAGGGTT+TGG | 0.419762 | 1_2:+74800541 | None:intergenic |
| ATAACAAGGACAACAATAAT+GGG | 0.432378 | 1_2:+74800825 | None:intergenic |
| CGCAACTTGTTTCAAAGCTA+TGG | 0.434158 | 1_2:+74798205 | None:intergenic |
| GGTAGCGTAAAGAATATGAA+TGG | 0.435289 | 1_2:+74801014 | None:intergenic |
| TTAACATGAACATTGTTGTC+TGG | 0.437073 | 1_2:+74800502 | None:intergenic |
| GGCTCCCAGTTTGAAATGCC+AGG | 0.438034 | 1_2:-74795970 | Msa0092380:CDS |
| ATAATCTAAGTCATTCGATC+TGG | 0.441928 | 1_2:-74795561 | Msa0092380:three_prime_UTR |
| TGCACAAGCGGGTTTATCAC+TGG | 0.443318 | 1_2:-74800650 | Msa0092380:CDS |
| GAAAATGAGGAATGTGGAAA+AGG | 0.444155 | 1_2:+74800935 | None:intergenic |
| CAGTGGTCTTGTTGCGGCTA+AGG | 0.444969 | 1_2:-74799672 | Msa0092380:intron |
| GTCATTCGATCTGGATTCAA+TGG | 0.457960 | 1_2:-74795552 | Msa0092380:three_prime_UTR |
| CCAGGAAGTATAATAATGTC+CGG | 0.460057 | 1_2:+74795902 | None:intergenic |
| TCATGGTGGGAAGAAGGTTT+CGG | 0.463885 | 1_2:-74799906 | Msa0092380:CDS |
| CTCTGGGATATAACTGCACT+CGG | 0.464654 | 1_2:-74798065 | Msa0092380:CDS |
| GAAAATTGCAGTTCAGTGTA+TGG | 0.467173 | 1_2:+74795774 | None:intergenic |
| ATGAACCTGAATGGAATTGA+GGG | 0.468985 | 1_2:+74800984 | None:intergenic |
| TATAAGGTTAATCCTTTGAC+TGG | 0.469652 | 1_2:-74799854 | Msa0092380:CDS |
| GACATCAAGAGGCTGTTTAG+AGG | 0.471361 | 1_2:-74796145 | Msa0092380:CDS |
| GTTGAAAAGAAAATGCAGAT+TGG | 0.472081 | 1_2:-74798117 | Msa0092380:CDS |
| CTCCAACAAATTCATCAAAT+GGG | 0.472113 | 1_2:-74800606 | Msa0092380:CDS |
| GTAGTTCTTATCCTAGAGAA+TGG | 0.476473 | 1_2:-74799763 | Msa0092380:CDS |
| AATGAACCTGAATGGAATTG+AGG | 0.477199 | 1_2:+74800983 | None:intergenic |
| GAATGCATGAAAACGAAGAA+AGG | 0.479006 | 1_2:+74800910 | None:intergenic |
| ACAATATCACAGTAATCAAA+TGG | 0.479034 | 1_2:+74798428 | None:intergenic |
| TGGGAATATGTGAATGTAGC+AGG | 0.479821 | 1_2:+74801034 | None:intergenic |
| CCACCACAAATAAGTATCTT+CGG | 0.482409 | 1_2:+74799785 | None:intergenic |
| AAGTATTCAGAGGGAATGCC+GGG | 0.484305 | 1_2:-74800157 | Msa0092380:CDS |
| TTATACTCATGGTGGGAAGA+AGG | 0.485816 | 1_2:-74799912 | Msa0092380:CDS |
| AGTCATGGTTATTATACTCA+TGG | 0.486337 | 1_2:-74799923 | Msa0092380:CDS |
| TAATAATGTCCGGGTATGAA+TGG | 0.486844 | 1_2:+74795912 | None:intergenic |
| TGGATTCTAAGGCTGTGAGT+TGG | 0.488319 | 1_2:-74800330 | Msa0092380:CDS |
| AATTCAAAACATGGTAAGCC+AGG | 0.491233 | 1_2:+74795884 | None:intergenic |
| TTTGATGAATTTGTTGGAGA+TGG | 0.492254 | 1_2:+74800610 | None:intergenic |
| GGTGTGAGAATAACAAGGTA+AGG | 0.492808 | 1_2:+74800849 | None:intergenic |
| TGGTTATATTGATTATGATA+AGG | 0.493587 | 1_2:-74799834 | Msa0092380:CDS |
| GCTTTATACCCATCGTTACA+AGG | 0.494852 | 1_2:-74798260 | Msa0092380:CDS |
| GAATCCTGGCATTTCAAACT+GGG | 0.497835 | 1_2:+74795966 | None:intergenic |
| TCCACCGCGACACGCTTCGC+CGG | 0.497839 | 1_2:+74800349 | None:intergenic |
| GAACAAGATGAAGTTGTTGA+TGG | 0.498321 | 1_2:-74800466 | Msa0092380:CDS |
| TAAAATCAATAATTGAATCC+TGG | 0.499060 | 1_2:+74795952 | None:intergenic |
| TATGGTTCTATTTCTTCTGG+AGG | 0.499529 | 1_2:-74796844 | Msa0092380:CDS |
| TAAAAGACAATACCTCCTCT+TGG | 0.502018 | 1_2:+74798374 | None:intergenic |
| TAAGTATTCAGAGGGAATGC+CGG | 0.502612 | 1_2:-74800158 | Msa0092380:CDS |
| GCACAAGCGGGTTTATCACT+GGG | 0.502741 | 1_2:-74800649 | Msa0092380:CDS |
| GATTCTAAGGCTGTGAGTTG+GGG | 0.507340 | 1_2:-74800328 | Msa0092380:CDS |
| TTGACTGTGATTTAAATCCA+TGG | 0.509713 | 1_2:-74795616 | Msa0092380:three_prime_UTR |
| TAGTTCTTATCCTAGAGAAT+GGG | 0.510663 | 1_2:-74799762 | Msa0092380:CDS |
| AAAATGAGGAATGTGGAAAA+GGG | 0.512568 | 1_2:+74800936 | None:intergenic |
| AATATTTACTATTATGGAGA+AGG | 0.513135 | 1_2:-74800275 | Msa0092380:CDS |
| CCGGTATAATATTTCGCTCC+CGG | 0.514845 | 1_2:+74800139 | None:intergenic |
| TATTGATTATGATAAGGTTG+AGG | 0.517586 | 1_2:-74799828 | Msa0092380:CDS |
| ACGAAGAAAGGGTGAAAATG+AGG | 0.518734 | 1_2:+74800922 | None:intergenic |
| AGGCCGAAGATACTTATTTG+TGG | 0.519395 | 1_2:-74799788 | Msa0092380:CDS |
| ACAACCCACAAAAGTCTTCG+AGG | 0.522891 | 1_2:-74798398 | Msa0092380:CDS |
| TCTTCTGGAGGAGTGAGAAT+CGG | 0.525184 | 1_2:-74796832 | Msa0092380:intron |
| AGCAGCAATGTGATTGTTGT+GGG | 0.529037 | 1_2:+74798232 | None:intergenic |
| GGTGAAACAATTGATTTCAT+GGG | 0.530175 | 1_2:-74800427 | Msa0092380:CDS |
| GTAGCGTAAAGAATATGAAT+GGG | 0.534428 | 1_2:+74801015 | None:intergenic |
| GATCTTGATTCAAGTAATTG+GGG | 0.535029 | 1_2:-74800058 | Msa0092380:CDS |
| ATGTTCCCTCTGTATAATGC+TGG | 0.535614 | 1_2:+74796074 | None:intergenic |
| TAAACCCGCTTGTGCATCCA+TGG | 0.538895 | 1_2:+74800657 | None:intergenic |
| GAGTGAAGAATGAACCTGAA+TGG | 0.540592 | 1_2:+74800975 | None:intergenic |
| AATGCATGAAAACGAAGAAA+GGG | 0.540977 | 1_2:+74800911 | None:intergenic |
| TGATCCATGGATGCACAAGC+GGG | 0.546671 | 1_2:-74800661 | Msa0092380:exon |
| GCGATTGTACAAATTATGCT+AGG | 0.548976 | 1_2:-74795738 | Msa0092380:three_prime_UTR |
| GGTTTGGATTCGGCGTCTGG+TGG | 0.551813 | 1_2:-74799953 | Msa0092380:CDS |
| AATGTCCGGGTATGAATGGA+TGG | 0.552771 | 1_2:+74795916 | None:intergenic |
| TCTGGTGGACATTTGAGTCA+TGG | 0.554954 | 1_2:-74799938 | Msa0092380:CDS |
| TCAGGATCAGCAACACTCAA+AGG | 0.560325 | 1_2:+74800298 | None:intergenic |
| AGGAAGATTGCTGATAAATG+TGG | 0.562025 | 1_2:-74799725 | Msa0092380:CDS |
| CTCGCATAATCCCATTCTCT+AGG | 0.565281 | 1_2:+74799752 | None:intergenic |
| GTATAAAGCATACATGCAGC+AGG | 0.570150 | 1_2:-74798174 | Msa0092380:CDS |
| ATAACAAGGTAAGGGTGAAG+AGG | 0.572396 | 1_2:+74800858 | None:intergenic |
| TGGGGACCTCCTTGTAACGA+TGG | 0.574338 | 1_2:+74798251 | None:intergenic |
| TTGACTAATAAGTATTCAGA+GGG | 0.575405 | 1_2:-74800166 | Msa0092380:CDS |
| TCATATCAGTGGTCTTGTTG+CGG | 0.575798 | 1_2:-74799678 | Msa0092380:CDS |
| TGCATGTATGCTTTATACTC+TGG | 0.576245 | 1_2:+74798179 | None:intergenic |
| GGGAATATGTGAATGTAGCA+GGG | 0.576872 | 1_2:+74801035 | None:intergenic |
| GGGCCAAAACCAAGGAAGCA+AGG | 0.577703 | 1_2:-74798344 | Msa0092380:CDS |
| AAGGGTGAAAATGAGGAATG+TGG | 0.580379 | 1_2:+74800929 | None:intergenic |
| TTGATCCATGGATGCACAAG+CGG | 0.585997 | 1_2:-74800662 | Msa0092380:exon |
| ACCGAAAAGGGCCAAAACCA+AGG | 0.591701 | 1_2:-74798352 | Msa0092380:CDS |
| GGGGACCTCCTTGTAACGAT+GGG | 0.593245 | 1_2:+74798252 | None:intergenic |
| ACGTTAAACAAACTCGACCA+TGG | 0.594681 | 1_2:+74795599 | None:intergenic |
| GATGAAGTTGTTGATGGTGA+TGG | 0.596078 | 1_2:-74800460 | Msa0092380:CDS |
| TTTGACTAATAAGTATTCAG+AGG | 0.596390 | 1_2:-74800167 | Msa0092380:CDS |
| AAATGCAGATTGGTTACTGA+TGG | 0.597826 | 1_2:-74798107 | Msa0092380:CDS |
| CAGGAAGTATAATAATGTCC+GGG | 0.598067 | 1_2:+74795903 | None:intergenic |
| GAGCAGCAATGTGATTGTTG+TGG | 0.598188 | 1_2:+74798231 | None:intergenic |
| TCCGGCGAAGCGTGTCGCGG+TGG | 0.601046 | 1_2:-74800350 | Msa0092380:CDS |
| ACTCCTGCAATGACATCAAG+AGG | 0.601746 | 1_2:-74796156 | Msa0092380:CDS |
| GATGGTGATGGTGAAGAAGA+AGG | 0.602741 | 1_2:-74800448 | Msa0092380:CDS |
| AGTAAACGCCATGAAAGAGA+AGG | 0.604955 | 1_2:+74800535 | None:intergenic |
| AAACAATTGATTTCATGGGT+AGG | 0.605913 | 1_2:-74800423 | Msa0092380:CDS |
| CATGGTTATTATACTCATGG+TGG | 0.607119 | 1_2:-74799920 | Msa0092380:CDS |
| ACCTTCCATCCATTCATACC+CGG | 0.609132 | 1_2:-74795921 | Msa0092380:three_prime_UTR |
| TGTTCCGGCGAAGCGTGTCG+CGG | 0.611098 | 1_2:-74800353 | Msa0092380:CDS |
| GTAGGCCTATTTGTTTCAAG+AGG | 0.611633 | 1_2:-74800405 | Msa0092380:CDS |
| ATGGTTATTATACTCATGGT+GGG | 0.612324 | 1_2:-74799919 | Msa0092380:CDS |
| TACAGACAGAAACTATGAGA+AGG | 0.612965 | 1_2:-74796908 | Msa0092380:intron |
| CCGAAGATACTTATTTGTGG+TGG | 0.613875 | 1_2:-74799785 | Msa0092380:CDS |
| CCGGGAGCGAAATATTATAC+CGG | 0.613923 | 1_2:-74800139 | Msa0092380:CDS |
| AGCATTATACAGAGGGAACA+TGG | 0.613990 | 1_2:-74796072 | Msa0092380:CDS |
| TAATCAATATAACCAGTCAA+AGG | 0.615001 | 1_2:+74799842 | None:intergenic |
| CTAGAGAATGGGATTATGCG+AGG | 0.616599 | 1_2:-74799751 | Msa0092380:CDS |
| TCCGGGTATGAATGGATGGA+AGG | 0.616758 | 1_2:+74795920 | None:intergenic |
| CCTCAGAAGAAAATCTGCCA+TGG | 0.616792 | 1_2:+74796110 | None:intergenic |
| GTGTGAGAATAACAAGGTAA+GGG | 0.619246 | 1_2:+74800850 | None:intergenic |
| GATTACCAGCATTATACAGA+GGG | 0.630319 | 1_2:-74796079 | Msa0092380:CDS |
| TAAGGTTGAGGAGAAAGCTG+TGG | 0.630384 | 1_2:-74799816 | Msa0092380:CDS |
| TGAATTTGTTGGAGATGGCA+TGG | 0.631230 | 1_2:+74800615 | None:intergenic |
| GTAAACGCCATGAAAGAGAA+GGG | 0.634712 | 1_2:+74800536 | None:intergenic |
| ATGTCTCAACCCGATTTCTG+AGG | 0.637365 | 1_2:+74795995 | None:intergenic |
| ATTCTAAGGCTGTGAGTTGG+GGG | 0.647751 | 1_2:-74800327 | Msa0092380:CDS |
| TGGTGGGAAGAAGGTTTCGG+CGG | 0.648151 | 1_2:-74799903 | Msa0092380:CDS |
| AAACCCATAATCCTATCACC+AGG | 0.648442 | 1_2:+74799971 | None:intergenic |
| AGTCTTCGAGGTCCAAGAGG+AGG | 0.652611 | 1_2:-74798386 | Msa0092380:CDS |
| AAACTATGAGAAGGTTTGTG+AGG | 0.660257 | 1_2:-74796899 | Msa0092380:CDS |
| AACACACAGCCAGTTACACA+CGG | 0.667954 | 1_2:+74795516 | None:intergenic |
| AAAAGTCTTCGAGGTCCAAG+AGG | 0.670998 | 1_2:-74798389 | Msa0092380:CDS |
| TGTGACATGGCTCATATCAG+TGG | 0.681496 | 1_2:-74799689 | Msa0092380:CDS |
| CACAAGCGGGTTTATCACTG+GGG | 0.683010 | 1_2:-74800648 | Msa0092380:CDS |
| AAACAGCAACAACAATAACA+AGG | 0.687576 | 1_2:+74800811 | None:intergenic |
| ACAAGGACAACAATAATGGG+TGG | 0.688538 | 1_2:+74800828 | None:intergenic |
| AGGGCTGTGATGGAAGCACT+TGG | 0.691729 | 1_2:-74800196 | Msa0092380:CDS |
| AGATTACCAGCATTATACAG+AGG | 0.693899 | 1_2:-74796080 | Msa0092380:CDS |
| TGGGTGGTGTGAGAATAACA+AGG | 0.720961 | 1_2:+74800844 | None:intergenic |
| GCAGCAATGTGATTGTTGTG+GGG | 0.748236 | 1_2:+74798233 | None:intergenic |
| TTATACCCATCGTTACAAGG+AGG | 0.763503 | 1_2:-74798257 | Msa0092380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAAATTGAAGTAAT+GGG | + | chr1_2:74795846-74795865 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAAATTGAAGTAA+TGG | + | chr1_2:74795847-74795866 | None:intergenic | 10.0% |
| !!! | TTTTTAAAAATTCAGATAAT+GGG | + | chr1_2:74795904-74795923 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAAATTCAGATAA+TGG | + | chr1_2:74795905-74795924 | None:intergenic | 10.0% |
| !!! | AATAATAAAAACAACTATTT+TGG | - | chr1_2:74797684-74797703 | Msa0092380:intron | 10.0% |
| !!! | AAAAATAATAACTTGTAATA+TGG | + | chr1_2:74798672-74798691 | None:intergenic | 10.0% |
| !!! | AAAATTCCAAAAATAATTTT+AGG | + | chr1_2:74799353-74799372 | None:intergenic | 10.0% |
| !!! | AAAAATCGATTTTTTTGAAT+TGG | - | chr1_2:74795922-74795941 | Msa0092380:three_prime_UTR | 15.0% |
| !!! | AAAATCGATTTTTTTGAATT+GGG | - | chr1_2:74795923-74795942 | Msa0092380:three_prime_UTR | 15.0% |
| !!! | ACATTTTAGAAAATGAAAAA+AGG | + | chr1_2:74797561-74797580 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAGATTATAGTC+CGG | + | chr1_2:74798018-74798037 | None:intergenic | 15.0% |
| !!! | TAATAGTAATTATGATTTTG+AGG | - | chr1_2:74798325-74798344 | Msa0092380:CDS | 15.0% |
| !!! | TATTTATGAATTTGTTAGAT+CGG | - | chr1_2:74799183-74799202 | Msa0092380:intron | 15.0% |
| !!! | TTTTAGCCTAAAATTATTTT+TGG | - | chr1_2:74799344-74799363 | Msa0092380:intron | 15.0% |
| !! | ATACATCTATTAAAAAAATG+GGG | + | chr1_2:74799416-74799435 | None:intergenic | 15.0% |
| !! | CATACATCTATTAAAAAAAT+GGG | + | chr1_2:74799417-74799436 | None:intergenic | 15.0% |
| !! | ATAAACATAATAAGATGATA+GGG | + | chr1_2:74799695-74799714 | None:intergenic | 15.0% |
| !! | TATAAACATAATAAGATGAT+AGG | + | chr1_2:74799696-74799715 | None:intergenic | 15.0% |
| !! | AAATACTAAACTAAATAGTA+TGG | + | chr1_2:74799929-74799948 | None:intergenic | 15.0% |
| !!! | TCTTTTTGAAAAAAAGTTTA+TGG | - | chr1_2:74800278-74800297 | Msa0092380:CDS | 15.0% |
| !! | ATGTTTAAACAAATTACTAT+CGG | - | chr1_2:74800380-74800399 | Msa0092380:CDS | 15.0% |
| !!! | CTAAAAATCCTTTATTTTAT+TGG | - | chr1_2:74800434-74800453 | Msa0092380:CDS | 15.0% |
| !! | TCCTGAAATATTTACTATTA+TGG | - | chr1_2:74796341-74796360 | Msa0092380:intron | 20.0% |
| !! | TCCATAATAGTAAATATTTC+AGG | + | chr1_2:74796345-74796364 | None:intergenic | 20.0% |
| !! | AATATTTACTATTATGGAGA+AGG | - | chr1_2:74796347-74796366 | Msa0092380:intron | 20.0% |
| !!! | TGGTTATATTGATTATGATA+AGG | - | chr1_2:74796788-74796807 | Msa0092380:intron | 20.0% |
| !!! | TTTATGAGTTTTACTTGTTT+TGG | - | chr1_2:74797006-74797025 | Msa0092380:intron | 20.0% |
| !!! | TTATGAGTTTTACTTGTTTT+GGG | - | chr1_2:74797007-74797026 | Msa0092380:intron | 20.0% |
| !! | TTTGTATTAGCAACTTAAAA+TGG | + | chr1_2:74797589-74797608 | None:intergenic | 20.0% |
| !! | AAACGTTATCATAAAGTAAA+CGG | - | chr1_2:74797812-74797831 | Msa0092380:intron | 20.0% |
| !! | ATAAAAAAGAACAGCATAAT+TGG | + | chr1_2:74798065-74798084 | None:intergenic | 20.0% |
| !!! | CAATTGTTTTTACTTTTTAC+AGG | - | chr1_2:74798160-74798179 | Msa0092380:CDS | 20.0% |
| !! | ATATATGAAAAACAAAACAG+AGG | + | chr1_2:74798608-74798627 | None:intergenic | 20.0% |
| !! | CAAATTAAAAGTGAATATGA+TGG | - | chr1_2:74798636-74798655 | Msa0092380:intron | 20.0% |
| !! | GGACATAATCATAAAATTTA+AGG | + | chr1_2:74798728-74798747 | None:intergenic | 20.0% |
| !!! | CATACACTTTTAATATATCA+GGG | + | chr1_2:74798749-74798768 | None:intergenic | 20.0% |
| !! | ACTTTCAAATTTGTATCAAT+TGG | - | chr1_2:74799120-74799139 | Msa0092380:intron | 20.0% |
| !! | CAAATTCATAAATAGTTTCT+AGG | + | chr1_2:74799177-74799196 | None:intergenic | 20.0% |
| !!! | ATTTATGAATTTGTTAGATC+GGG | - | chr1_2:74799184-74799203 | Msa0092380:intron | 20.0% |
| !! | CCATACATCTATTAAAAAAA+TGG | + | chr1_2:74799418-74799437 | None:intergenic | 20.0% |
| !!! | CCATTTTTTTAATAGATGTA+TGG | - | chr1_2:74799415-74799434 | Msa0092380:intron | 20.0% |
| !! | TTATAAGACAAAAGGAATAT+AGG | + | chr1_2:74799640-74799659 | None:intergenic | 20.0% |
| !! | GTACAAATTTATAAGACAAA+AGG | + | chr1_2:74799648-74799667 | None:intergenic | 20.0% |
| !!! | TATTTTAATACTTTGACTTC+GGG | + | chr1_2:74799838-74799857 | None:intergenic | 20.0% |
| !!! | CTATTTTAATACTTTGACTT+CGG | + | chr1_2:74799839-74799858 | None:intergenic | 20.0% |
| !!! | TCAGTTTACGTTAATTTTTT+TGG | - | chr1_2:74799861-74799880 | Msa0092380:CDS | 20.0% |
| !! | TAAACTAAATAGTATGGTAA+AGG | + | chr1_2:74799923-74799942 | None:intergenic | 20.0% |
| !! | TTTGTTAAATATGTGGATAT+TGG | + | chr1_2:74800034-74800053 | None:intergenic | 20.0% |
| !! | ATATCCACATATTTAACAAA+TGG | - | chr1_2:74800034-74800053 | Msa0092380:CDS | 20.0% |
| !!! | ATTACCATTTGTTAAATATG+TGG | + | chr1_2:74800041-74800060 | None:intergenic | 20.0% |
| !!! | ATGGTAATATCTTATTTTGT+TGG | - | chr1_2:74800053-74800072 | Msa0092380:CDS | 20.0% |
| !! | TGTTTAAACAAATTACTATC+GGG | - | chr1_2:74800381-74800400 | Msa0092380:CDS | 20.0% |
| !! | TTTAGCAATAATTAAACGTA+AGG | + | chr1_2:74800419-74800438 | None:intergenic | 20.0% |
| !! | TAAAATCAATAATTGAATCC+TGG | + | chr1_2:74800673-74800692 | None:intergenic | 20.0% |
| !! | TGGAAAAATAATTCAAAACA+TGG | + | chr1_2:74800750-74800769 | None:intergenic | 20.0% |
| !!! | TGTTTTGAATTATTTTTCCA+TGG | - | chr1_2:74800750-74800769 | Msa0092380:five_prime_UTR | 20.0% |
| !! | AATTACATGACAATGTTATT+TGG | - | chr1_2:74800942-74800961 | Msa0092380:five_prime_UTR | 20.0% |
| ! | ATAACAAGGACAACAATAAT+GGG | + | chr1_2:74795800-74795819 | None:intergenic | 25.0% |
| ! | AATAACAAGGACAACAATAA+TGG | + | chr1_2:74795801-74795820 | None:intergenic | 25.0% |
| !!! | TTAAAAATTCAGATAATGGG+TGG | + | chr1_2:74795901-74795920 | None:intergenic | 25.0% |
| !!! | TTGAATTGGGTATTTTTGTT+TGG | - | chr1_2:74795936-74795955 | Msa0092380:three_prime_UTR | 25.0% |
| !!! | TGAATTGGGTATTTTTGTTT+GGG | - | chr1_2:74795937-74795956 | Msa0092380:three_prime_UTR | 25.0% |
| ! | TTTGACTAATAAGTATTCAG+AGG | - | chr1_2:74796455-74796474 | Msa0092380:intron | 25.0% |
| ! | TTGACTAATAAGTATTCAGA+GGG | - | chr1_2:74796456-74796475 | Msa0092380:intron | 25.0% |
| ! | TTGATCTTGATTCAAGTAAT+TGG | - | chr1_2:74796562-74796581 | Msa0092380:intron | 25.0% |
| ! | TGATCTTGATTCAAGTAATT+GGG | - | chr1_2:74796563-74796582 | Msa0092380:intron | 25.0% |
| ! | TAATCAATATAACCAGTCAA+AGG | + | chr1_2:74796783-74796802 | None:intergenic | 25.0% |
| !! | TATTGATTATGATAAGGTTG+AGG | - | chr1_2:74796794-74796813 | Msa0092380:intron | 25.0% |
| ! | TCTCAATTGATACTATTTGA+AGG | - | chr1_2:74797041-74797060 | Msa0092380:intron | 25.0% |
| ! | CTCAATTGATACTATTTGAA+GGG | - | chr1_2:74797042-74797061 | Msa0092380:intron | 25.0% |
| ! | AGTGTAATTCTATTTGAAAG+TGG | - | chr1_2:74797342-74797361 | Msa0092380:intron | 25.0% |
| ! | GTGTAATTCTATTTGAAAGT+GGG | - | chr1_2:74797343-74797362 | Msa0092380:intron | 25.0% |
| !! | CTTCAGTTTATGCATATTTT+TGG | + | chr1_2:74797475-74797494 | None:intergenic | 25.0% |
| ! | TCATCTTCTCTTCATTATAA+TGG | + | chr1_2:74797634-74797653 | None:intergenic | 25.0% |
| !! | GAACAATTGTGTGAATTTTT+CGG | + | chr1_2:74797724-74797743 | None:intergenic | 25.0% |
| ! | CTATTATCTTCATGTTAGAT+AGG | - | chr1_2:74797755-74797774 | Msa0092380:intron | 25.0% |
| ! | AACGTTATCATAAAGTAAAC+GGG | - | chr1_2:74797813-74797832 | Msa0092380:intron | 25.0% |
| ! | ACTGTATACGAATGATTAAA+AGG | + | chr1_2:74797964-74797983 | None:intergenic | 25.0% |
| !!! | GCTGTTCTTTTTTATTTGTT+TGG | - | chr1_2:74798070-74798089 | Msa0092380:CDS | 25.0% |
| ! | ACAATTGTCAATATACATGA+AGG | + | chr1_2:74798147-74798166 | None:intergenic | 25.0% |
| ! | ACAATATCACAGTAATCAAA+TGG | + | chr1_2:74798197-74798216 | None:intergenic | 25.0% |
| !! | TTTTTCATCATTTAGCAACA+TGG | + | chr1_2:74798697-74798716 | None:intergenic | 25.0% |
| !! | GCATACACTTTTAATATATC+AGG | + | chr1_2:74798750-74798769 | None:intergenic | 25.0% |
| ! | GATACAAATTTGAAAGTCTT+TGG | + | chr1_2:74799117-74799136 | None:intergenic | 25.0% |
| ! | CAGATACTTTGAATTTGAAA+AGG | + | chr1_2:74799377-74799396 | None:intergenic | 25.0% |
| ! | AATAGAGATATTTGACTAAG+TGG | - | chr1_2:74799461-74799480 | Msa0092380:intron | 25.0% |
| ! | AGAAGAAATAGAACCATAAA+TGG | + | chr1_2:74799776-74799795 | None:intergenic | 25.0% |
| !! | ATTTATGGTTCTATTTCTTC+TGG | - | chr1_2:74799775-74799794 | Msa0092380:CDS | 25.0% |
| ! | AAGAATAGTATAGAGTAGTA+GGG | + | chr1_2:74800118-74800137 | None:intergenic | 25.0% |
| ! | CTTGAAAAACAAATCTTCTA+TGG | + | chr1_2:74800151-74800170 | None:intergenic | 25.0% |
| !!! | AATGTGTTTTAGGAAACTTT+TGG | - | chr1_2:74800224-74800243 | Msa0092380:CDS | 25.0% |
| !!! | ATGTGTTTTAGGAAACTTTT+GGG | - | chr1_2:74800225-74800244 | Msa0092380:CDS | 25.0% |
| !! | AGTTTATGGAAAATGAGTTT+TGG | - | chr1_2:74800292-74800311 | Msa0092380:CDS | 25.0% |
| !! | GTTTATGGAAAATGAGTTTT+GGG | - | chr1_2:74800293-74800312 | Msa0092380:CDS | 25.0% |
| ! | TATACAGTCTCATTTATTCT+TGG | - | chr1_2:74800342-74800361 | Msa0092380:CDS | 25.0% |
| ! | ATACAGTCTCATTTATTCTT+GGG | - | chr1_2:74800343-74800362 | Msa0092380:CDS | 25.0% |
| ! | CCTGAATACCAATAAAATAA+AGG | + | chr1_2:74800445-74800464 | None:intergenic | 25.0% |
| !!! | CCTTTATTTTATTGGTATTC+AGG | - | chr1_2:74800442-74800461 | Msa0092380:CDS | 25.0% |
| !!! | ATATTTTTGACCTCAGAAAT+CGG | - | chr1_2:74800617-74800636 | Msa0092380:CDS | 25.0% |
| GTAGCGTAAAGAATATGAAT+GGG | + | chr1_2:74795610-74795629 | None:intergenic | 30.0% | |
| AATGGAATTGAGGGATAATA+AGG | + | chr1_2:74795632-74795651 | None:intergenic | 30.0% | |
| AAAATGAGGAATGTGGAAAA+GGG | + | chr1_2:74795689-74795708 | None:intergenic | 30.0% | |
| AATGCATGAAAACGAAGAAA+GGG | + | chr1_2:74795714-74795733 | None:intergenic | 30.0% | |
| AAACAGCAACAACAATAACA+AGG | + | chr1_2:74795814-74795833 | None:intergenic | 30.0% | |
| !! | TTTGATGAATTTGTTGGAGA+TGG | + | chr1_2:74796015-74796034 | None:intergenic | 30.0% |
| TCTCCAACAAATTCATCAAA+TGG | - | chr1_2:74796015-74796034 | Msa0092380:CDS | 30.0% | |
| CTCCAACAAATTCATCAAAT+GGG | - | chr1_2:74796016-74796035 | Msa0092380:CDS | 30.0% | |
| !!! | GGTTTGGTTTTGAATTCAAA+TGG | + | chr1_2:74796068-74796087 | None:intergenic | 30.0% |
| TTAACATGAACATTGTTGTC+TGG | + | chr1_2:74796123-74796142 | None:intergenic | 30.0% | |
| ! | AGGTGAAACAATTGATTTCA+TGG | - | chr1_2:74796194-74796213 | Msa0092380:intron | 30.0% |
| ! | GGTGAAACAATTGATTTCAT+GGG | - | chr1_2:74796195-74796214 | Msa0092380:intron | 30.0% |
| ! | AAACAATTGATTTCATGGGT+AGG | - | chr1_2:74796199-74796218 | Msa0092380:intron | 30.0% |
| AATCTCCTCTTGAAACAAAT+AGG | + | chr1_2:74796225-74796244 | None:intergenic | 30.0% | |
| !!! | AACACAACAAAGTTTTGTTC+CGG | - | chr1_2:74796254-74796273 | Msa0092380:intron | 30.0% |
| GAAAAGTTGAGACAGTTTAA+AGG | - | chr1_2:74796369-74796388 | Msa0092380:intron | 30.0% | |
| !! | TTCTGAGAATTTTGTTTGCA+GGG | - | chr1_2:74796407-74796426 | Msa0092380:intron | 30.0% |
| ! | CTGATCAATATACTGATTAC+CGG | + | chr1_2:74796505-74796524 | None:intergenic | 30.0% |
| GATCTTGATTCAAGTAATTG+GGG | - | chr1_2:74796564-74796583 | Msa0092380:intron | 30.0% | |
| TTAGCTGAAGTACATGAATA+AGG | + | chr1_2:74796603-74796622 | None:intergenic | 30.0% | |
| !!! | GCTAATTTTGCTGTTTATAC+TGG | - | chr1_2:74796618-74796637 | Msa0092380:intron | 30.0% |
| AGTCATGGTTATTATACTCA+TGG | - | chr1_2:74796699-74796718 | Msa0092380:intron | 30.0% | |
| ATGGTTATTATACTCATGGT+GGG | - | chr1_2:74796703-74796722 | Msa0092380:intron | 30.0% | |
| !!! | TTTTGAGACTTTGCCTTATA+AGG | - | chr1_2:74796752-74796771 | Msa0092380:intron | 30.0% |
| GTCAAAGGATTAACCTTATA+AGG | + | chr1_2:74796768-74796787 | None:intergenic | 30.0% | |
| TATAAGGTTAATCCTTTGAC+TGG | - | chr1_2:74796768-74796787 | Msa0092380:intron | 30.0% | |
| TAGTTCTTATCCTAGAGAAT+GGG | - | chr1_2:74796860-74796879 | Msa0092380:CDS | 30.0% | |
| CTTTGCTTTATAGACATGTT+TGG | - | chr1_2:74797106-74797125 | Msa0092380:intron | 30.0% | |
| AATCACATACACAATAAGAC+AGG | + | chr1_2:74797139-74797158 | None:intergenic | 30.0% | |
| TCATTATAATGGTTCACTTC+AGG | + | chr1_2:74797623-74797642 | None:intergenic | 30.0% | |
| ACGTTATCATAAAGTAAACG+GGG | - | chr1_2:74797814-74797833 | Msa0092380:intron | 30.0% | |
| ! | GGCTTAATATTTCTTTTGGT+GGG | - | chr1_2:74797835-74797854 | Msa0092380:intron | 30.0% |
| ATGTGATTCATAAAAGGACA+AGG | + | chr1_2:74797907-74797926 | None:intergenic | 30.0% | |
| TAGGAGATGTGATTCATAAA+AGG | + | chr1_2:74797913-74797932 | None:intergenic | 30.0% | |
| GAATGATTAAAAGGATGACT+TGG | + | chr1_2:74797955-74797974 | None:intergenic | 30.0% | |
| ! | GTATTGTCTTTTACCGAAAA+GGG | - | chr1_2:74798258-74798277 | Msa0092380:CDS | 30.0% |
| GTTGAAAAGAAAATGCAGAT+TGG | - | chr1_2:74798505-74798524 | Msa0092380:intron | 30.0% | |
| AAATCTATCTTTATCCCACT+AGG | - | chr1_2:74798960-74798979 | Msa0092380:intron | 30.0% | |
| AAGGTAGCAAAATGAAAAGA+AGG | + | chr1_2:74798989-74799008 | None:intergenic | 30.0% | |
| CAAATTTGAAAGTCTTTGGA+TGG | + | chr1_2:74799113-74799132 | None:intergenic | 30.0% | |
| AAACACAACCTTGAGTTAAA+AGG | + | chr1_2:74799279-74799298 | None:intergenic | 30.0% | |
| TGTGTTTACTCGATAAGTAA+TGG | - | chr1_2:74799292-74799311 | Msa0092380:intron | 30.0% | |
| TATACAAAACTCAACAACAG+AGG | + | chr1_2:74799539-74799558 | None:intergenic | 30.0% | |
| TGTGGATATTGGATCTTATA+TGG | + | chr1_2:74800023-74800042 | None:intergenic | 30.0% | |
| CAAGAATAGTATAGAGTAGT+AGG | + | chr1_2:74800119-74800138 | None:intergenic | 30.0% | |
| ! | TGGAAGGAAAAATGTGTTTT+AGG | - | chr1_2:74800214-74800233 | Msa0092380:CDS | 30.0% |
| !!! | TGTGTTTTAGGAAACTTTTG+GGG | - | chr1_2:74800226-74800245 | Msa0092380:CDS | 30.0% |
| ! | ATCATGCAAAGATTTTCTCA+AGG | - | chr1_2:74800576-74800595 | Msa0092380:CDS | 30.0% |
| ! | TCATGCAAAGATTTTCTCAA+GGG | - | chr1_2:74800577-74800596 | Msa0092380:CDS | 30.0% |
| !! | TATTTTTGACCTCAGAAATC+GGG | - | chr1_2:74800618-74800637 | Msa0092380:CDS | 30.0% |
| AAAAATCTGACTAGATACCA+TGG | + | chr1_2:74800770-74800789 | None:intergenic | 30.0% | |
| TACAATCGCTAAGTAATAAC+TGG | + | chr1_2:74800873-74800892 | None:intergenic | 30.0% | |
| TTGACTGTGATTTAAATCCA+TGG | - | chr1_2:74801006-74801025 | Msa0092380:five_prime_UTR | 30.0% | |
| ATAATCTAAGTCATTCGATC+TGG | - | chr1_2:74801061-74801080 | Msa0092380:intron | 30.0% | |
| GGTAGCGTAAAGAATATGAA+TGG | + | chr1_2:74795611-74795630 | None:intergenic | 35.0% | |
| ATTATCCCTCAATTCCATTC+AGG | - | chr1_2:74795633-74795652 | Msa0092380:three_prime_UTR | 35.0% | |
| ATGAACCTGAATGGAATTGA+GGG | + | chr1_2:74795641-74795660 | None:intergenic | 35.0% | |
| AATGAACCTGAATGGAATTG+AGG | + | chr1_2:74795642-74795661 | None:intergenic | 35.0% | |
| GAAAATGAGGAATGTGGAAA+AGG | + | chr1_2:74795690-74795709 | None:intergenic | 35.0% | |
| GAATGCATGAAAACGAAGAA+AGG | + | chr1_2:74795715-74795734 | None:intergenic | 35.0% | |
| GTGTGAGAATAACAAGGTAA+GGG | + | chr1_2:74795775-74795794 | None:intergenic | 35.0% | |
| !!! | TTTTTGTTTGGGTTGATCCA+TGG | - | chr1_2:74795948-74795967 | Msa0092380:exon | 35.0% |
| GACCCATTTGATGAATTTGT+TGG | + | chr1_2:74796021-74796040 | None:intergenic | 35.0% | |
| GAACAAGATGAAGTTGTTGA+TGG | - | chr1_2:74796156-74796175 | Msa0092380:CDS | 35.0% | |
| TTGTTTCAAGAGGAGATTAG+AGG | - | chr1_2:74796227-74796246 | Msa0092380:intron | 35.0% | |
| !! | CTTCTGAGAATTTTGTTTGC+AGG | - | chr1_2:74796406-74796425 | Msa0092380:intron | 35.0% |
| !!! | TATACTGGTCTTTTGAATCC+TGG | - | chr1_2:74796633-74796652 | Msa0092380:intron | 35.0% |
| AATCCTGGTGATAGGATTAT+GGG | - | chr1_2:74796648-74796667 | Msa0092380:intron | 35.0% | |
| TAGGATTATGGGTTTGGATT+CGG | - | chr1_2:74796659-74796678 | Msa0092380:intron | 35.0% | |
| CATGGTTATTATACTCATGG+TGG | - | chr1_2:74796702-74796721 | Msa0092380:intron | 35.0% | |
| CCACCACAAATAAGTATCTT+CGG | + | chr1_2:74796840-74796859 | None:intergenic | 35.0% | |
| GTAGTTCTTATCCTAGAGAA+TGG | - | chr1_2:74796859-74796878 | Msa0092380:CDS | 35.0% | |
| AGGAAGATTGCTGATAAATG+TGG | - | chr1_2:74796897-74796916 | Msa0092380:CDS | 35.0% | |
| GAAGGGTAGAGTTAGATATA+TGG | - | chr1_2:74797059-74797078 | Msa0092380:intron | 35.0% | |
| !! | TTCCTTAGTTCTAGCATGTT+AGG | - | chr1_2:74797244-74797263 | Msa0092380:intron | 35.0% |
| TTCCTAACATGCTAGAACTA+AGG | + | chr1_2:74797249-74797268 | None:intergenic | 35.0% | |
| !! | TTAGTTCTAGCATGTTAGGA+AGG | - | chr1_2:74797248-74797267 | Msa0092380:intron | 35.0% |
| !!! | CAAAATGACCTCACCTTTTT+TGG | - | chr1_2:74797279-74797298 | Msa0092380:intron | 35.0% |
| TGATACGAAAGAGCCAAAAA+AGG | + | chr1_2:74797295-74797314 | None:intergenic | 35.0% | |
| TTTCGTATCATCGAGTTTGA+TGG | - | chr1_2:74797305-74797324 | Msa0092380:intron | 35.0% | |
| TCCTTCATGAAGGTGATTAA+CGG | + | chr1_2:74797390-74797409 | None:intergenic | 35.0% | |
| ! | GCAATTAGTTTCCTTCATGA+AGG | + | chr1_2:74797400-74797419 | None:intergenic | 35.0% |
| TCATGAAGGAAACTAATTGC+CGG | - | chr1_2:74797400-74797419 | Msa0092380:intron | 35.0% | |
| TTTACTATTTGCCTGTTTGG+TGG | - | chr1_2:74797427-74797446 | Msa0092380:intron | 35.0% | |
| CAATTTACATTCCACCAAAC+AGG | + | chr1_2:74797441-74797460 | None:intergenic | 35.0% | |
| TGGAATGTAAATTGCCTAGA+TGG | - | chr1_2:74797447-74797466 | Msa0092380:intron | 35.0% | |
| !!! | GCATATTTTTGGAACCATCT+AGG | + | chr1_2:74797464-74797483 | None:intergenic | 35.0% |
| TCGTGTATCTAATCTTTGTC+CGG | - | chr1_2:74797495-74797514 | Msa0092380:intron | 35.0% | |
| ! | TAATCTTTGTCCGGTTTTCA+TGG | - | chr1_2:74797504-74797523 | Msa0092380:intron | 35.0% |
| ATGACCTTTACCATGAAAAC+CGG | + | chr1_2:74797517-74797536 | None:intergenic | 35.0% | |
| ! | AGATCGAGATGATGCATTTT+TGG | - | chr1_2:74797660-74797679 | Msa0092380:intron | 35.0% |
| ! | ACGGGGCTTAATATTTCTTT+TGG | - | chr1_2:74797831-74797850 | Msa0092380:intron | 35.0% |
| ! | GGGCTTAATATTTCTTTTGG+TGG | - | chr1_2:74797834-74797853 | Msa0092380:intron | 35.0% |
| AGTTGTTTGTGAAATGTGAG+TGG | - | chr1_2:74797866-74797885 | Msa0092380:intron | 35.0% | |
| !! | AAAGGATGACTTGGTTGTTA+GGG | + | chr1_2:74797946-74797965 | None:intergenic | 35.0% |
| !! | AAAAGGATGACTTGGTTGTT+AGG | + | chr1_2:74797947-74797966 | None:intergenic | 35.0% |
| AGAAATTTCACGTGTGTAAC+CGG | - | chr1_2:74797996-74798015 | Msa0092380:intron | 35.0% | |
| TTTGTTTGGCGCTTTGTAAA+AGG | - | chr1_2:74798084-74798103 | Msa0092380:CDS | 35.0% | |
| TAAAAGACAATACCTCCTCT+TGG | + | chr1_2:74798251-74798270 | None:intergenic | 35.0% | |
| ! | GGTATTGTCTTTTACCGAAA+AGG | - | chr1_2:74798257-74798276 | Msa0092380:CDS | 35.0% |
| !! | CAAGGCTTTGTTCTTAATCA+TGG | - | chr1_2:74798296-74798315 | Msa0092380:CDS | 35.0% |
| TGCATGTATGCTTTATACTC+TGG | + | chr1_2:74798446-74798465 | None:intergenic | 35.0% | |
| ! | AAATGCAGATTGGTTACTGA+TGG | - | chr1_2:74798515-74798534 | Msa0092380:intron | 35.0% |
| ! | TGACAATCATCTTTTGCTCT+GGG | - | chr1_2:74798541-74798560 | Msa0092380:intron | 35.0% |
| ATAACTGCACTCGGTTTAAT+TGG | - | chr1_2:74798566-74798585 | Msa0092380:intron | 35.0% | |
| ATGCACAAGTCAATTCTTTG+TGG | - | chr1_2:74798850-74798869 | Msa0092380:intron | 35.0% | |
| AGGAGAAGAGTGATAAGTTA+AGG | + | chr1_2:74799008-74799027 | None:intergenic | 35.0% | |
| AAGATAAACCTCGCATATCT+TGG | + | chr1_2:74799046-74799065 | None:intergenic | 35.0% | |
| ATGAGCAATAGACAGTTAGT+AGG | - | chr1_2:74799236-74799255 | Msa0092380:intron | 35.0% | |
| AGAGATATTTGACTAAGTGG+TGG | - | chr1_2:74799464-74799483 | Msa0092380:intron | 35.0% | |
| TACAGACAGAAACTATGAGA+AGG | - | chr1_2:74799714-74799733 | Msa0092380:CDS | 35.0% | |
| AAACTATGAGAAGGTTTGTG+AGG | - | chr1_2:74799723-74799742 | Msa0092380:CDS | 35.0% | |
| !! | CTCAATAAGTGTGCCATTTA+TGG | - | chr1_2:74799760-74799779 | Msa0092380:CDS | 35.0% |
| ! | TATGGTTCTATTTCTTCTGG+AGG | - | chr1_2:74799778-74799797 | Msa0092380:CDS | 35.0% |
| !! | TAGTATTTTGAGTCCATGCT+TGG | - | chr1_2:74799941-74799960 | Msa0092380:CDS | 35.0% |
| ACTCTATACTATTCTTGTGC+TGG | - | chr1_2:74800122-74800141 | Msa0092380:CDS | 35.0% | |
| ! | ATTTTTCCTTCCAACAGAGT+GGG | + | chr1_2:74800207-74800226 | None:intergenic | 35.0% |
| !! | TTTTAGGAAACTTTTGGGGA+AGG | - | chr1_2:74800230-74800249 | Msa0092380:CDS | 35.0% |
| ! | TTACTATCGGGTCTTTTGAA+TGG | - | chr1_2:74800393-74800412 | Msa0092380:CDS | 35.0% |
| AGATTACCAGCATTATACAG+AGG | - | chr1_2:74800542-74800561 | Msa0092380:CDS | 35.0% | |
| GATTACCAGCATTATACAGA+GGG | - | chr1_2:74800543-74800562 | Msa0092380:CDS | 35.0% | |
| TAATAATGTCCGGGTATGAA+TGG | + | chr1_2:74800713-74800732 | None:intergenic | 35.0% | |
| ! | CAGGAAGTATAATAATGTCC+GGG | + | chr1_2:74800722-74800741 | None:intergenic | 35.0% |
| ! | CCAGGAAGTATAATAATGTC+CGG | + | chr1_2:74800723-74800742 | None:intergenic | 35.0% |
| AATTCAAAACATGGTAAGCC+AGG | + | chr1_2:74800741-74800760 | None:intergenic | 35.0% | |
| GAAAATTGCAGTTCAGTGTA+TGG | + | chr1_2:74800851-74800870 | None:intergenic | 35.0% | |
| GCGATTGTACAAATTATGCT+AGG | - | chr1_2:74800884-74800903 | Msa0092380:five_prime_UTR | 35.0% | |
| TCTCCAAAACCAAAAGAGTA+TGG | + | chr1_2:74800911-74800930 | None:intergenic | 35.0% | |
| TTATTTGGCACTCTTGTTGA+TGG | - | chr1_2:74800957-74800976 | Msa0092380:five_prime_UTR | 35.0% | |
| GAAGTTGAACATTGGGGTTT+GGG | + | chr1_2:74795568-74795587 | None:intergenic | 40.0% | |
| TAGCAGGGAAGTTGAACATT+GGG | + | chr1_2:74795575-74795594 | None:intergenic | 40.0% | |
| GGGAATATGTGAATGTAGCA+GGG | + | chr1_2:74795590-74795609 | None:intergenic | 40.0% | |
| TGGGAATATGTGAATGTAGC+AGG | + | chr1_2:74795591-74795610 | None:intergenic | 40.0% | |
| GAGTGAAGAATGAACCTGAA+TGG | + | chr1_2:74795650-74795669 | None:intergenic | 40.0% | |
| AAGGGTGAAAATGAGGAATG+TGG | + | chr1_2:74795696-74795715 | None:intergenic | 40.0% | |
| ACGAAGAAAGGGTGAAAATG+AGG | + | chr1_2:74795703-74795722 | None:intergenic | 40.0% | |
| ATAACAAGGTAAGGGTGAAG+AGG | + | chr1_2:74795767-74795786 | None:intergenic | 40.0% | |
| GGTGTGAGAATAACAAGGTA+AGG | + | chr1_2:74795776-74795795 | None:intergenic | 40.0% | |
| ! | ACAAGGACAACAATAATGGG+TGG | + | chr1_2:74795797-74795816 | None:intergenic | 40.0% |
| !! | TGAATTTGTTGGAGATGGCA+TGG | + | chr1_2:74796010-74796029 | None:intergenic | 40.0% |
| AACCAAACCCTTCTCTTTCA+TGG | - | chr1_2:74796079-74796098 | Msa0092380:CDS | 40.0% | |
| GTAAACGCCATGAAAGAGAA+GGG | + | chr1_2:74796089-74796108 | None:intergenic | 40.0% | |
| AGTAAACGCCATGAAAGAGA+AGG | + | chr1_2:74796090-74796109 | None:intergenic | 40.0% | |
| !! | GATGAAGTTGTTGATGGTGA+TGG | - | chr1_2:74796162-74796181 | Msa0092380:intron | 40.0% |
| GTAGGCCTATTTGTTTCAAG+AGG | - | chr1_2:74796217-74796236 | Msa0092380:intron | 40.0% | |
| TAAGTATTCAGAGGGAATGC+CGG | - | chr1_2:74796464-74796483 | Msa0092380:intron | 40.0% | |
| ! | GTCTTTTGAATCCTGGTGAT+AGG | - | chr1_2:74796640-74796659 | Msa0092380:intron | 40.0% |
| GAATCCTGGTGATAGGATTA+TGG | - | chr1_2:74796647-74796666 | Msa0092380:intron | 40.0% | |
| AAACCCATAATCCTATCACC+AGG | + | chr1_2:74796654-74796673 | None:intergenic | 40.0% | |
| TGGTGATAGGATTATGGGTT+TGG | - | chr1_2:74796653-74796672 | Msa0092380:intron | 40.0% | |
| ! | TTATACTCATGGTGGGAAGA+AGG | - | chr1_2:74796710-74796729 | Msa0092380:intron | 40.0% |
| ! | AGGAGAAAGCTGTGGATTAT+AGG | - | chr1_2:74796814-74796833 | Msa0092380:intron | 40.0% |
| AGGCCGAAGATACTTATTTG+TGG | - | chr1_2:74796834-74796853 | Msa0092380:CDS | 40.0% | |
| CCGAAGATACTTATTTGTGG+TGG | - | chr1_2:74796837-74796856 | Msa0092380:CDS | 40.0% | |
| AATGGGATTATGCGAGGTTT+AGG | - | chr1_2:74796877-74796896 | Msa0092380:CDS | 40.0% | |
| !!! | AGCTGTTTTGATGTGTGACA+TGG | - | chr1_2:74796920-74796939 | Msa0092380:intron | 40.0% |
| !! | TCATATCAGTGGTCTTGTTG+CGG | - | chr1_2:74796944-74796963 | Msa0092380:intron | 40.0% |
| TTCTAGCATGTTAGGAAGGA+TGG | - | chr1_2:74797252-74797271 | Msa0092380:intron | 40.0% | |
| TCCGTTAATCACCTTCATGA+AGG | - | chr1_2:74797386-74797405 | Msa0092380:intron | 40.0% | |
| CATGAAGGAAACTAATTGCC+GGG | - | chr1_2:74797401-74797420 | Msa0092380:intron | 40.0% | |
| ATGAAGGAAACTAATTGCCG+GGG | - | chr1_2:74797402-74797421 | Msa0092380:intron | 40.0% | |
| GGGTTTACTATTTGCCTGTT+TGG | - | chr1_2:74797424-74797443 | Msa0092380:intron | 40.0% | |
| ! | TTGTCCGGTTTTCATGGTAA+AGG | - | chr1_2:74797510-74797529 | Msa0092380:intron | 40.0% |
| TGTGAAATGTGAGTGGATAG+TGG | - | chr1_2:74797873-74797892 | Msa0092380:intron | 40.0% | |
| GTGAAATGTGAGTGGATAGT+GGG | - | chr1_2:74797874-74797893 | Msa0092380:intron | 40.0% | |
| !! | AAGGATGACTTGGTTGTTAG+GGG | + | chr1_2:74797945-74797964 | None:intergenic | 40.0% |
| !! | AAGACTTTTGTGGGTTGTTG+AGG | + | chr1_2:74798222-74798241 | None:intergenic | 40.0% |
| GCTTTATACCCATCGTTACA+AGG | - | chr1_2:74798362-74798381 | Msa0092380:CDS | 40.0% | |
| TTATACCCATCGTTACAAGG+AGG | - | chr1_2:74798365-74798384 | Msa0092380:CDS | 40.0% | |
| AGCAGCAATGTGATTGTTGT+GGG | + | chr1_2:74798393-74798412 | None:intergenic | 40.0% | |
| ! | CGCAACTTGTTTCAAAGCTA+TGG | + | chr1_2:74798420-74798439 | None:intergenic | 40.0% |
| GTATAAAGCATACATGCAGC+AGG | - | chr1_2:74798448-74798467 | Msa0092380:intron | 40.0% | |
| ! | CTGACAATCATCTTTTGCTC+TGG | - | chr1_2:74798540-74798559 | Msa0092380:intron | 40.0% |
| TGAAAAGAAGGCAACCTAGT+GGG | + | chr1_2:74798977-74798996 | None:intergenic | 40.0% | |
| ATGAAAAGAAGGCAACCTAG+TGG | + | chr1_2:74798978-74798997 | None:intergenic | 40.0% | |
| TATCTTGGCAAATAGTCCTC+AGG | + | chr1_2:74799031-74799050 | None:intergenic | 40.0% | |
| ACTATTTGCCAAGATATGCG+AGG | - | chr1_2:74799035-74799054 | Msa0092380:intron | 40.0% | |
| AGTTAGTAGGAGTCTCTGTA+TGG | - | chr1_2:74799249-74799268 | Msa0092380:intron | 40.0% | |
| GTTAGTAGGAGTCTCTGTAT+GGG | - | chr1_2:74799250-74799269 | Msa0092380:intron | 40.0% | |
| !! | ATGGGTGTCCTTTTAACTCA+AGG | - | chr1_2:74799268-74799287 | Msa0092380:intron | 40.0% |
| TATTTGACTAAGTGGTGGCA+AGG | - | chr1_2:74799469-74799488 | Msa0092380:intron | 40.0% | |
| AAACAGTGACAAACCAAGCA+TGG | + | chr1_2:74799957-74799976 | None:intergenic | 40.0% | |
| ! | TTTTTCCTTCCAACAGAGTG+GGG | + | chr1_2:74800206-74800225 | None:intergenic | 40.0% |
| ! | CATTTTTCCTTCCAACAGAG+TGG | + | chr1_2:74800208-74800227 | None:intergenic | 40.0% |
| ATGTTCCCTCTGTATAATGC+TGG | + | chr1_2:74800551-74800570 | None:intergenic | 40.0% | |
| AGCATTATACAGAGGGAACA+TGG | - | chr1_2:74800550-74800569 | Msa0092380:CDS | 40.0% | |
| !! | AGAAATCGGGTTGAGACATT+TGG | - | chr1_2:74800631-74800650 | Msa0092380:CDS | 40.0% |
| GAATCCTGGCATTTCAAACT+GGG | + | chr1_2:74800659-74800678 | None:intergenic | 40.0% | |
| TGAATCCTGGCATTTCAAAC+TGG | + | chr1_2:74800660-74800679 | None:intergenic | 40.0% | |
| CCGGACATTATTATACTTCC+TGG | - | chr1_2:74800720-74800739 | Msa0092380:five_prime_UTR | 40.0% | |
| ! | ATGCTAGGTCCATACTCTTT+TGG | - | chr1_2:74800899-74800918 | Msa0092380:five_prime_UTR | 40.0% |
| !!! | GGTCCATACTCTTTTGGTTT+TGG | - | chr1_2:74800905-74800924 | Msa0092380:five_prime_UTR | 40.0% |
| ACGTTAAACAAACTCGACCA+TGG | + | chr1_2:74801026-74801045 | None:intergenic | 40.0% | |
| GTCATTCGATCTGGATTCAA+TGG | - | chr1_2:74801070-74801089 | Msa0092380:intron | 40.0% | |
| TTGAACATTGGGGTTTGGGT+TGG | + | chr1_2:74795564-74795583 | None:intergenic | 45.0% | |
| GGAAGTTGAACATTGGGGTT+TGG | + | chr1_2:74795569-74795588 | None:intergenic | 45.0% | |
| AGCAGGGAAGTTGAACATTG+GGG | + | chr1_2:74795574-74795593 | None:intergenic | 45.0% | |
| GTAGCAGGGAAGTTGAACAT+TGG | + | chr1_2:74795576-74795595 | None:intergenic | 45.0% | |
| TGGGTGGTGTGAGAATAACA+AGG | + | chr1_2:74795781-74795800 | None:intergenic | 45.0% | |
| TTGATCCATGGATGCACAAG+CGG | - | chr1_2:74795960-74795979 | Msa0092380:CDS | 45.0% | |
| !! | GATGGTGATGGTGAAGAAGA+AGG | - | chr1_2:74796174-74796193 | Msa0092380:intron | 45.0% |
| !! | TGGATTCTAAGGCTGTGAGT+TGG | - | chr1_2:74796292-74796311 | Msa0092380:intron | 45.0% |
| !! | GGATTCTAAGGCTGTGAGTT+GGG | - | chr1_2:74796293-74796312 | Msa0092380:intron | 45.0% |
| !! | GATTCTAAGGCTGTGAGTTG+GGG | - | chr1_2:74796294-74796313 | Msa0092380:intron | 45.0% |
| !! | ATTCTAAGGCTGTGAGTTGG+GGG | - | chr1_2:74796295-74796314 | Msa0092380:intron | 45.0% |
| TCAGGATCAGCAACACTCAA+AGG | + | chr1_2:74796327-74796346 | None:intergenic | 45.0% | |
| !! | TTTTGTTTGCAGGGCTGTGA+TGG | - | chr1_2:74796416-74796435 | Msa0092380:intron | 45.0% |
| AAGTATTCAGAGGGAATGCC+GGG | - | chr1_2:74796465-74796484 | Msa0092380:intron | 45.0% | |
| CCGGTATAATATTTCGCTCC+CGG | + | chr1_2:74796486-74796505 | None:intergenic | 45.0% | |
| CCGGGAGCGAAATATTATAC+CGG | - | chr1_2:74796483-74796502 | Msa0092380:intron | 45.0% | |
| ! | TCTGGTGGACATTTGAGTCA+TGG | - | chr1_2:74796684-74796703 | Msa0092380:intron | 45.0% |
| ! | TCATGGTGGGAAGAAGGTTT+CGG | - | chr1_2:74796716-74796735 | Msa0092380:intron | 45.0% |
| TAAGGTTGAGGAGAAAGCTG+TGG | - | chr1_2:74796806-74796825 | Msa0092380:intron | 45.0% | |
| CTCGCATAATCCCATTCTCT+AGG | + | chr1_2:74796873-74796892 | None:intergenic | 45.0% | |
| CTAGAGAATGGGATTATGCG+AGG | - | chr1_2:74796871-74796890 | Msa0092380:CDS | 45.0% | |
| TGTGACATGGCTCATATCAG+TGG | - | chr1_2:74796933-74796952 | Msa0092380:intron | 45.0% | |
| CGAAAGAGCCAAAAAAGGTG+AGG | + | chr1_2:74797290-74797309 | None:intergenic | 45.0% | |
| TGAAGGAAACTAATTGCCGG+GGG | - | chr1_2:74797403-74797422 | Msa0092380:intron | 45.0% | |
| ! | TTGTTAGGGGTGTGGGATAT+AGG | + | chr1_2:74797932-74797951 | None:intergenic | 45.0% |
| AAGCGTGTCAAGTCATGCTA+TGG | + | chr1_2:74798120-74798139 | None:intergenic | 45.0% | |
| ACAACCCACAAAAGTCTTCG+AGG | - | chr1_2:74798224-74798243 | Msa0092380:CDS | 45.0% | |
| ! | TGGACCTCGAAGACTTTTGT+GGG | + | chr1_2:74798231-74798250 | None:intergenic | 45.0% |
| ! | TTGGACCTCGAAGACTTTTG+TGG | + | chr1_2:74798232-74798251 | None:intergenic | 45.0% |
| AAAAGTCTTCGAGGTCCAAG+AGG | - | chr1_2:74798233-74798252 | Msa0092380:CDS | 45.0% | |
| !!! | TCCTTGGTTTTGGCCCTTTT+CGG | + | chr1_2:74798274-74798293 | None:intergenic | 45.0% |
| ! | AAGCCTTGCTTCCTTGGTTT+TGG | + | chr1_2:74798284-74798303 | None:intergenic | 45.0% |
| AGAACAAAGCCTTGCTTCCT+TGG | + | chr1_2:74798290-74798309 | None:intergenic | 45.0% | |
| GCAGCAATGTGATTGTTGTG+GGG | + | chr1_2:74798392-74798411 | None:intergenic | 45.0% | |
| GAGCAGCAATGTGATTGTTG+TGG | + | chr1_2:74798394-74798413 | None:intergenic | 45.0% | |
| !! | CTCTGGGATATAACTGCACT+CGG | - | chr1_2:74798557-74798576 | Msa0092380:intron | 45.0% |
| TTATCACTCTTCTCCTCCTG+AGG | - | chr1_2:74799012-74799031 | Msa0092380:intron | 45.0% | |
| CAAAACTCAACAACAGAGGC+TGG | + | chr1_2:74799535-74799554 | None:intergenic | 45.0% | |
| ! | TCTTCTGGAGGAGTGAGAAT+CGG | - | chr1_2:74799790-74799809 | Msa0092380:CDS | 45.0% |
| TTATTCCCCACTCTGTTGGA+AGG | - | chr1_2:74800198-74800217 | Msa0092380:CDS | 45.0% | |
| ACTCCTGCAATGACATCAAG+AGG | - | chr1_2:74800466-74800485 | Msa0092380:CDS | 45.0% | |
| GACATCAAGAGGCTGTTTAG+AGG | - | chr1_2:74800477-74800496 | Msa0092380:CDS | 45.0% | |
| !!! | AGAGGACGATTTTGAGACCA+TGG | - | chr1_2:74800495-74800514 | Msa0092380:CDS | 45.0% |
| ATGTCTCAACCCGATTTCTG+AGG | + | chr1_2:74800630-74800649 | None:intergenic | 45.0% | |
| ACCTTCCATCCATTCATACC+CGG | - | chr1_2:74800701-74800720 | Msa0092380:five_prime_UTR | 45.0% | |
| AATGTCCGGGTATGAATGGA+TGG | + | chr1_2:74800709-74800728 | None:intergenic | 45.0% | |
| !! | GGGTTTGGGTTGGTACTCTT+TGG | + | chr1_2:74795554-74795573 | None:intergenic | 50.0% |
| TGATCCATGGATGCACAAGC+GGG | - | chr1_2:74795961-74795980 | Msa0092380:CDS | 50.0% | |
| TAAACCCGCTTGTGCATCCA+TGG | + | chr1_2:74795968-74795987 | None:intergenic | 50.0% | |
| ! | TGCACAAGCGGGTTTATCAC+TGG | - | chr1_2:74795972-74795991 | Msa0092380:CDS | 50.0% |
| ! | GCACAAGCGGGTTTATCACT+GGG | - | chr1_2:74795973-74795992 | Msa0092380:CDS | 50.0% |
| ! | CACAAGCGGGTTTATCACTG+GGG | - | chr1_2:74795974-74795993 | Msa0092380:CDS | 50.0% |
| CGCCATGAAAGAGAAGGGTT+TGG | + | chr1_2:74796084-74796103 | None:intergenic | 50.0% | |
| GAAGGAAACTAATTGCCGGG+GGG | - | chr1_2:74797404-74797423 | Msa0092380:intron | 50.0% | |
| CAGGCAAATAGTAAACCCCC+CGG | + | chr1_2:74797422-74797441 | None:intergenic | 50.0% | |
| ! | GACTTGGTTGTTAGGGGTGT+GGG | + | chr1_2:74797939-74797958 | None:intergenic | 50.0% |
| !! | TGACTTGGTTGTTAGGGGTG+TGG | + | chr1_2:74797940-74797959 | None:intergenic | 50.0% |
| ACCGAAAAGGGCCAAAACCA+AGG | - | chr1_2:74798270-74798289 | Msa0092380:CDS | 50.0% | |
| CTTGGCAAATAGTCCTCAGG+AGG | + | chr1_2:74799028-74799047 | None:intergenic | 50.0% | |
| GCTCTTATTCCCCACTCTGT+TGG | - | chr1_2:74800194-74800213 | Msa0092380:CDS | 50.0% | |
| CAGCCTCTTGATGTCATTGC+AGG | + | chr1_2:74800472-74800491 | None:intergenic | 50.0% | |
| TCCGGGTATGAATGGATGGA+AGG | + | chr1_2:74800705-74800724 | None:intergenic | 50.0% | |
| GAGTCACTACCGTGTGTAAC+TGG | - | chr1_2:74801097-74801116 | Msa0092380:five_prime_UTR | 50.0% | |
| !! | AGGGCTGTGATGGAAGCACT+TGG | - | chr1_2:74796426-74796445 | Msa0092380:intron | 55.0% |
| ATGGGTTTGGATTCGGCGTC+TGG | - | chr1_2:74796666-74796685 | Msa0092380:intron | 55.0% | |
| TGGTGGGAAGAAGGTTTCGG+CGG | - | chr1_2:74796719-74796738 | Msa0092380:intron | 55.0% | |
| !! | CAGTGGTCTTGTTGCGGCTA+AGG | - | chr1_2:74796950-74796969 | Msa0092380:intron | 55.0% |
| AGTCTTCGAGGTCCAAGAGG+AGG | - | chr1_2:74798236-74798255 | Msa0092380:CDS | 55.0% | |
| GGGCCAAAACCAAGGAAGCA+AGG | - | chr1_2:74798278-74798297 | Msa0092380:CDS | 55.0% | |
| GGGGACCTCCTTGTAACGAT+GGG | + | chr1_2:74798373-74798392 | None:intergenic | 55.0% | |
| TGGGGACCTCCTTGTAACGA+TGG | + | chr1_2:74798374-74798393 | None:intergenic | 55.0% | |
| ! | GGCTCCCAGTTTGAAATGCC+AGG | - | chr1_2:74800652-74800671 | Msa0092380:CDS | 55.0% |
| ! | GCGTGTCGCGGTGGATTCTA+AGG | - | chr1_2:74796281-74796300 | Msa0092380:intron | 60.0% |
| GGTTTGGATTCGGCGTCTGG+TGG | - | chr1_2:74796669-74796688 | Msa0092380:intron | 60.0% | |
| TGTTCCGGCGAAGCGTGTCG+CGG | - | chr1_2:74796269-74796288 | Msa0092380:intron | 65.0% | |
| TCCACCGCGACACGCTTCGC+CGG | + | chr1_2:74796276-74796295 | None:intergenic | 70.0% | |
| TCCGGCGAAGCGTGTCGCGG+TGG | - | chr1_2:74796272-74796291 | Msa0092380:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 74795522 | 74801122 | 74795522 | ID=Msa0092380;Name=Msa0092380 |
| chr1_2 | mRNA | 74795522 | 74801122 | 74795522 | ID=Msa0092380-mRNA-1;Parent=Msa0092380;Name=Msa0092380-mRNA-1;_AED=0.04;_eAED=0.04;_QI=425|1|1|1|0.75|0.6|5|435|575 |
| chr1_2 | exon | 74795522 | 74796180 | 74795522 | ID=Msa0092380-mRNA-1:exon:26376;Parent=Msa0092380-mRNA-1 |
| chr1_2 | exon | 74796833 | 74796925 | 74796833 | ID=Msa0092380-mRNA-1:exon:26375;Parent=Msa0092380-mRNA-1 |
| chr1_2 | exon | 74798057 | 74798462 | 74798057 | ID=Msa0092380-mRNA-1:exon:26374;Parent=Msa0092380-mRNA-1 |
| chr1_2 | exon | 74799673 | 74801066 | 74799673 | ID=Msa0092380-mRNA-1:exon:26373;Parent=Msa0092380-mRNA-1 |
| chr1_2 | exon | 74801087 | 74801122 | 74801087 | ID=Msa0092380-mRNA-1:exon:26372;Parent=Msa0092380-mRNA-1 |
| chr1_2 | five_prime_UTR | 74801087 | 74801122 | 74801087 | ID=Msa0092380-mRNA-1:five_prime_utr;Parent=Msa0092380-mRNA-1 |
| chr1_2 | five_prime_UTR | 74800678 | 74801066 | 74800678 | ID=Msa0092380-mRNA-1:five_prime_utr;Parent=Msa0092380-mRNA-1 |
| chr1_2 | CDS | 74799673 | 74800677 | 74799673 | ID=Msa0092380-mRNA-1:cds;Parent=Msa0092380-mRNA-1 |
| chr1_2 | CDS | 74798057 | 74798462 | 74798057 | ID=Msa0092380-mRNA-1:cds;Parent=Msa0092380-mRNA-1 |
| chr1_2 | CDS | 74796833 | 74796925 | 74796833 | ID=Msa0092380-mRNA-1:cds;Parent=Msa0092380-mRNA-1 |
| chr1_2 | CDS | 74795957 | 74796180 | 74795957 | ID=Msa0092380-mRNA-1:cds;Parent=Msa0092380-mRNA-1 |
| chr1_2 | three_prime_UTR | 74795522 | 74795956 | 74795522 | ID=Msa0092380-mRNA-1:three_prime_utr;Parent=Msa0092380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
