AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0418580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0418580 MtrunA17_Chr1g0205611 97.780 856 19 0 1 856 1 856 0.0 1744
Msa0418580 MtrunA17_Chr7g0272791 64.160 851 295 6 9 856 24 867 0.0 1161
Msa0418580 MtrunA17_Chr1g0191921 63.850 852 298 6 6 856 16 858 0.0 1137
Msa0418580 MtrunA17_Chr8g0342881 57.998 869 324 11 8 856 9 856 0.0 1028
Msa0418580 MtrunA17_Chr2g0329901 57.094 874 336 10 3 856 9 863 0.0 1021
Msa0418580 MtrunA17_Chr2g0329911 56.322 870 347 10 3 856 9 861 0.0 1011
Msa0418580 MtrunA17_Chr8g0343021 56.229 875 339 10 7 856 9 864 0.0 997
Msa0418580 MtrunA17_Chr8g0344211 54.868 873 354 9 7 856 13 868 0.0 993
Msa0418580 MtrunA17_Chr8g0343031 56.150 878 341 10 4 856 7 865 0.0 991
Msa0418580 MtrunA17_Chr8g0342971 55.479 876 346 12 7 856 13 870 0.0 989
Msa0418580 MtrunA17_Chr8g0342951 56.128 873 343 9 7 856 13 868 0.0 989
Msa0418580 MtrunA17_Chr8g0342891 55.006 869 355 9 7 856 10 861 0.0 986
Msa0418580 MtrunA17_Chr5g0406871 55.782 882 345 15 1 856 5 867 0.0 981
Msa0418580 MtrunA17_Chr8g0343011 55.074 877 351 10 3 856 9 865 0.0 981
Msa0418580 MtrunA17_Chr3g0120071 54.724 868 359 9 6 856 8 858 0.0 976
Msa0418580 MtrunA17_Chr8g0342921 54.171 875 358 11 7 856 13 869 0.0 965
Msa0418580 MtrunA17_Chr8g0342931 58.453 763 301 6 97 856 1 750 0.0 943
Msa0418580 MtrunA17_Chr8g0342901 52.124 871 340 12 9 856 12 828 0.0 909
Msa0418580 MtrunA17_Chr8g0343001 48.611 864 374 12 3 856 4 807 0.0 840
Msa0418580 MtrunA17_Chr8g0342991 48.902 865 370 15 3 856 4 807 0.0 838
Msa0418580 MtrunA17_Chr8g0342981 50.482 830 358 14 39 856 35 823 0.0 806
Msa0418580 MtrunA17_Chr8g0344201 44.703 859 454 12 2 855 84 926 0.0 724
Msa0418580 MtrunA17_Chr8g0338451 42.735 819 441 13 30 834 46 850 0.0 691
Msa0418580 MtrunA17_Chr3g0118651 45.408 784 400 12 83 856 138 903 0.0 684
Msa0418580 MtrunA17_Chr8g0377101 42.209 860 455 19 13 856 83 916 0.0 678
Msa0418580 MtrunA17_Chr3g0118641 43.515 825 436 14 39 856 101 902 0.0 671
Msa0418580 MtrunA17_Chr3g0118621 43.369 837 437 15 31 856 55 865 0.0 641
Msa0418580 MtrunA17_Chr4g0033171 45.682 718 368 12 146 856 23 725 0.0 637
Msa0418580 MtrunA17_Chr4g0047281 41.603 786 406 15 79 855 153 894 0.0 621
Msa0418580 MtrunA17_Chr8g0344241 61.000 400 150 2 458 856 67 461 7.87e-179 523
Msa0418580 MtrunA17_Chr6g0471951 42.240 509 252 5 310 814 12 482 1.28e-143 433
Msa0418580 MtrunA17_Chr7g0218231 57.983 119 49 1 504 621 14 132 4.69e-40 144
Msa0418580 MtrunA17_Chr6g0468081 52.809 89 41 1 534 621 1 89 5.15e-23 94.4
Msa0418580 MtrunA17_Chr2g0277191 65.455 55 19 0 725 779 58 112 1.17e-18 82.8
Msa0418580 MtrunA17_Chr3g0137991 40.458 131 54 3 728 856 1 109 2.91e-17 78.2
Msa0418580 MtrunA17_Chr7g0272781 59.322 59 24 0 747 805 11 69 9.04e-17 76.3
Msa0418580 MtrunA17_Chr4g0047271 37.500 96 54 2 761 855 1 91 1.66e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0418580 AT3G22400.1 68.360 866 262 6 1 856 23 886 0.0 1270
Msa0418580 AT1G55020.1 63.028 852 302 7 7 856 19 859 0.0 1130
Msa0418580 AT1G17420.1 43.794 854 460 14 6 856 83 919 0.0 705
Msa0418580 AT1G72520.1 43.860 855 459 15 6 856 89 926 0.0 705
Msa0418580 AT3G45140.1 43.365 844 424 19 28 856 92 896 0.0 662
Msa0418580 AT3G45140.2 45.431 777 384 16 95 856 3 754 0.0 657
Msa0418580 AT1G67560.1 40.651 829 460 15 38 856 111 917 0.0 623

Find 227 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTGATGGATTGGAAATA+TGG 0.195211 3_2:+66363390 Msa0418580:CDS
AATGAGCTTGGACTATTTAA+AGG 0.196439 3_2:-66364434 None:intergenic
CCAACACCTCTGATTATTCT+AGG 0.202417 3_2:+66364020 Msa0418580:CDS
GCAGAGTTCAATTCTAAATA+AGG 0.214356 3_2:+66357091 Msa0418580:five_prime_UTR
AATCATGCACCATTATTATA+TGG 0.217985 3_2:+66363588 Msa0418580:CDS
CCATTTCTGTTCTTCAAACT+TGG 0.226207 3_2:-66363965 None:intergenic
CTGTTTGTAGCTATTATAAA+TGG 0.235592 3_2:-66362940 None:intergenic
TATTGCCTTTGCATATTCTA+AGG 0.236092 3_2:-66364536 None:intergenic
GATTATGCACGTCCTGTTAT+TGG 0.248026 3_2:+66361387 Msa0418580:CDS
TTGCTTGGATGGAACTGTTT+TGG 0.264526 3_2:-66362347 None:intergenic
GCTCAGTTCCAAACTCTTCT+TGG 0.275910 3_2:+66363776 Msa0418580:CDS
AAGCTGGACCCAAGTGTTTA+TGG 0.279198 3_2:+66362321 Msa0418580:CDS
TTACTGTCTTGAGGTAAAAT+TGG 0.280689 3_2:-66358911 None:intergenic
GAACATAAATGTTTAGATTC+AGG 0.281536 3_2:-66361579 None:intergenic
TGAGGGTCATGGCGACTTAA+AGG 0.288673 3_2:+66363520 Msa0418580:CDS
CGACTAACCGTTGGACGATT+TGG 0.306665 3_2:-66363671 None:intergenic
CATGAGAAGATGGGAGTTCC+AGG 0.310878 3_2:+66358858 Msa0418580:CDS
AATGTCTAATTTGCAAGAAA+TGG 0.311515 3_2:-66364588 None:intergenic
ACACTAGACATGACACTTAC+AGG 0.318567 3_2:-66364264 None:intergenic
AATTCTCAGTTACATTTGAT+TGG 0.321925 3_2:+66358832 Msa0418580:CDS
AACACTTGGGTCCAGCTTGC+TGG 0.325774 3_2:-66362316 None:intergenic
TGACACCAAAGCAAAGTCTT+TGG 0.333137 3_2:-66364125 None:intergenic
TTCTATGTGCTTTGCTTGGA+TGG 0.334407 3_2:-66362358 None:intergenic
TTGAAGTAGTGTTTAGGTAT+TGG 0.337605 3_2:+66357288 Msa0418580:intron
CTGAACCATTGGCAGCATTT+AGG 0.343244 3_2:+66363885 Msa0418580:CDS
GCTCTTGAAGCCACATTTCA+AGG 0.348885 3_2:+66362993 Msa0418580:CDS
CTTTAGATTGAAGGCGTGTT+TGG 0.354996 3_2:+66364170 Msa0418580:three_prime_UTR
CTCAACTTGCGCAGTGGCTC+CGG 0.379170 3_2:-66361252 None:intergenic
AGAAAGGCAAAGGTGATAAA+AGG 0.379868 3_2:+66364561 Msa0418580:three_prime_UTR
TCGACTGAAGAGGTTTATCT+TGG 0.381313 3_2:+66363830 Msa0418580:CDS
AGAGAACTTGTTAGGAATGA+TGG 0.388843 3_2:+66361826 Msa0418580:CDS
TTTGTGTTGCTAACCTGTTT+TGG 0.389210 3_2:-66361463 None:intergenic
TTCACTCAAATCTGTTGCTC+AGG 0.389795 3_2:+66361651 Msa0418580:CDS
TCCAATCCATCAACAGCAAA+AGG 0.389933 3_2:-66363383 None:intergenic
TATGCTGCTGTCAATGATTC+CGG 0.392299 3_2:+66362791 Msa0418580:CDS
ATGACACACCAAGAAGAGTT+TGG 0.394806 3_2:-66363784 None:intergenic
AGTGTTACTGCTCCTGATCC+AGG 0.395801 3_2:+66357475 Msa0418580:CDS
CCAAGTTTGAAGAACAGAAA+TGG 0.396374 3_2:+66363965 Msa0418580:CDS
TTTAATGAAGAAAAGCTTGT+TGG 0.401300 3_2:+66357375 Msa0418580:CDS
ATAACAGGACGTGCATAATC+TGG 0.402270 3_2:-66361384 None:intergenic
TCAATTCTAGTCTTCATTTG+TGG 0.405339 3_2:-66363557 None:intergenic
ATTCGTAATACTTTCTGAAC+TGG 0.407877 3_2:+66364454 Msa0418580:three_prime_UTR
CATTTCTGTTCTTCAAACTT+GGG 0.408863 3_2:-66363964 None:intergenic
CCCTCCGTGGTAAAGGGATT+GGG 0.410795 3_2:+66361292 Msa0418580:CDS
GTTCCAAGAGATGAACAGTT+TGG 0.412030 3_2:+66361598 Msa0418580:CDS
TGGAGGACTGATGAGGAGTT+TGG 0.413208 3_2:+66361996 Msa0418580:CDS
GAGTTGCAAACAAAAGTTAC+AGG 0.414236 3_2:-66358960 None:intergenic
TTTCATGCAGCTGTGAACTT+TGG 0.414934 3_2:+66363623 Msa0418580:CDS
TGCCATCATCTTGTAGAAAC+AGG 0.415749 3_2:-66362640 None:intergenic
TGAATGTACCCACATATGTT+TGG 0.419253 3_2:-66364206 None:intergenic
ATTCTCAGTTACATTTGATT+GGG 0.419719 3_2:+66358833 Msa0418580:CDS
TTGGGAAACAGAAGAGTATA+AGG 0.420916 3_2:-66364001 None:intergenic
ACCCTCCGTGGTAAAGGGAT+TGG 0.422875 3_2:+66361291 Msa0418580:CDS
CCATGAGGGCTATTTGAATC+TGG 0.424740 3_2:-66363335 None:intergenic
CTTGCTACCCTCCGTGGTAA+AGG 0.427794 3_2:+66361285 Msa0418580:CDS
TAGCAAGAATTCAAAGAGAA+TGG 0.431016 3_2:-66364093 None:intergenic
TTTGGAAGAGAAATGCTTGC+TGG 0.431144 3_2:+66362014 Msa0418580:CDS
GTTCTTCCTCTACGCGGATA+AGG 0.431368 3_2:-66361426 None:intergenic
GCATAATCTGGACCATCATC+TGG 0.433208 3_2:-66361372 None:intergenic
TGACCAAACTGTTCATCTCT+TGG 0.434284 3_2:-66361601 None:intergenic
TCAGCATCTGAAGTCCAATC+AGG 0.434438 3_2:-66363866 None:intergenic
CATAAATATCAAGTACATCT+TGG 0.438116 3_2:-66361732 None:intergenic
TTGCTACCCTCCGTGGTAAA+GGG 0.442904 3_2:+66361286 Msa0418580:CDS
AGTCGTCCACATACCAAAAC+AGG 0.445120 3_2:+66361450 Msa0418580:CDS
AGAAGCCACCCATATAATAA+TGG 0.446648 3_2:-66363597 None:intergenic
TCAAACCAAAGACTTTGCTT+TGG 0.447658 3_2:+66364120 Msa0418580:three_prime_UTR
TGATTGGGAGCATGAGAAGA+TGG 0.450644 3_2:+66358848 Msa0418580:CDS
TGTAGACGGCGAATGATAAC+AGG 0.451680 3_2:-66362044 None:intergenic
TCTAGGGAGGGTGGACTCAC+TGG 0.452810 3_2:+66364037 Msa0418580:CDS
GACAGACAGTAGACCCTGAT+TGG 0.453708 3_2:+66363852 Msa0418580:CDS
TATTAGCAAAGGGGCTGAAA+GGG 0.454636 3_2:+66358736 Msa0418580:intron
ACATGGAAAAGTGGCATGCT+TGG 0.457740 3_2:+66358761 Msa0418580:CDS
GTCAAAGTTTAGAGGGAATG+AGG 0.457958 3_2:-66364615 None:intergenic
GAGGGTGGACTCACTGGTAA+AGG 0.459557 3_2:+66364043 Msa0418580:CDS
GCTAACTAGTTGATGATATC+CGG 0.459666 3_2:-66362810 None:intergenic
GAACGTTTGATTTGATGTCA+TGG 0.461854 3_2:-66357402 None:intergenic
GTCTTCAAATTATCATATGT+TGG 0.462320 3_2:+66364403 Msa0418580:three_prime_UTR
GATGTACTTGATATTTATGA+AGG 0.463379 3_2:+66361736 Msa0418580:CDS
TCATTCAGACACTCTAGTCT+TGG 0.464247 3_2:-66364363 None:intergenic
GAAAGTATTACGAATGAGCT+TGG 0.464361 3_2:-66364446 None:intergenic
GATTGGGAGCATGAGAAGAT+GGG 0.465067 3_2:+66358849 Msa0418580:CDS
TACTCTGGTGTACCTTGCTC+AGG 0.466421 3_2:-66363704 None:intergenic
GGCTTCAAGAGCTTATGAAT+TGG 0.467742 3_2:-66362982 None:intergenic
CGTGTCCTGGAATGTCATCT+AGG 0.470457 3_2:-66358935 None:intergenic
ATCATGCACCATTATTATAT+GGG 0.471863 3_2:+66363589 Msa0418580:CDS
TTTCCCTGGTAAATTTGCAT+TGG 0.472021 3_2:+66363086 Msa0418580:CDS
CTAGAATAATCAGAGGTGTT+GGG 0.474495 3_2:-66364019 None:intergenic
TTTCTGATTATGAAAGCTCC+TGG 0.475739 3_2:-66358876 None:intergenic
TCACCGACACTTTAGATTGA+AGG 0.476255 3_2:+66364161 Msa0418580:three_prime_UTR
CAAGTTTGAAGAACAGAAAT+GGG 0.479323 3_2:+66363966 Msa0418580:CDS
CCTAGAATAATCAGAGGTGT+TGG 0.480588 3_2:-66364020 None:intergenic
TTTGGCAGGTAACCTGCATA+AGG 0.481527 3_2:-66363653 None:intergenic
CTTGGGTCCAGCTTGCTGGC+AGG 0.483218 3_2:-66362312 None:intergenic
GACTTCAGATGCTGAACCAT+TGG 0.484611 3_2:+66363874 Msa0418580:CDS
TACCTCTTGAGCAGATTAGC+AGG 0.485331 3_2:-66363159 None:intergenic
TTGGAAGAGAAATGCTTGCT+GGG 0.486947 3_2:+66362015 Msa0418580:CDS
GTAACCCTAGATGACATTCC+AGG 0.492472 3_2:+66358930 Msa0418580:CDS
TGTTGATGGATTGGAAATAT+GGG 0.500247 3_2:+66363391 Msa0418580:CDS
ATTTCCAATGCAAATTTACC+AGG 0.500259 3_2:-66363090 None:intergenic
CACATAGAAAATAGTTTAGA+CGG 0.501898 3_2:+66362372 Msa0418580:CDS
CTATGCATGCTACAATGACT+TGG 0.502290 3_2:+66361344 Msa0418580:CDS
GAGTTTATTCTACTTAGGTA+TGG 0.503850 3_2:-66362584 None:intergenic
TAACCGTTGGACGATTTGGC+AGG 0.504486 3_2:-66363667 None:intergenic
ATTTCCTCCTGCCAGCAAGC+TGG 0.504571 3_2:+66362305 Msa0418580:CDS
AAAGTTACAGGACCGTGTCC+TGG 0.504639 3_2:-66358948 None:intergenic
GTACGTAACAAGAAGAATCA+TGG 0.508161 3_2:+66357315 Msa0418580:exon
TATATACCTTTGATCACGTC+AGG 0.508817 3_2:-66361874 None:intergenic
AGGCATACACTTATCAATGC+TGG 0.509065 3_2:+66363042 Msa0418580:CDS
TTACTATGCAAAGGTCCACT+TGG 0.509317 3_2:-66361772 None:intergenic
TGTTCTAGTGGCATAAGTCT+TGG 0.510087 3_2:-66362615 None:intergenic
TGTTGTTCACCTTGTGGATG+AGG 0.510839 3_2:-66362695 None:intergenic
TATGGGATGCAATTGAAACT+TGG 0.511065 3_2:+66363408 Msa0418580:CDS
TTGAGAATAATATCATGAAA+AGG 0.511936 3_2:+66363933 Msa0418580:CDS
CCTTTGATCACGTCAGGCAC+AGG 0.514728 3_2:-66361868 None:intergenic
TAAACTTTCTTACTTGTAGA+CGG 0.515365 3_2:-66362058 None:intergenic
TTTGGACAATACCCTTATGC+AGG 0.516651 3_2:+66363641 Msa0418580:CDS
TGGAGGGTCATAATGTCATA+TGG 0.519668 3_2:-66357066 None:intergenic
TGGTAGAGTTTATTCTACTT+AGG 0.520535 3_2:-66362589 None:intergenic
CAACACCTCTGATTATTCTA+GGG 0.521711 3_2:+66364021 Msa0418580:CDS
GCTGCTACTCCTTCATGTGA+TGG 0.522089 3_2:-66362743 None:intergenic
CGTCACGAACCAAACATATG+TGG 0.527411 3_2:+66364197 Msa0418580:three_prime_UTR
CCAGATTCAAATAGCCCTCA+TGG 0.529426 3_2:+66363335 Msa0418580:CDS
TCAAAGAGAATGGTTTCAGA+TGG 0.529655 3_2:-66364083 None:intergenic
TCATGTGTGTAACGATGAGT+AGG 0.529926 3_2:-66358993 None:intergenic
TCACACAGAGATCTAAGCTC+TGG 0.533691 3_2:-66361682 None:intergenic
GTTTCAGATGGATATGCTGT+TGG 0.534874 3_2:-66364071 None:intergenic
AGCAGCCACCGTGTGGCAGT+TGG 0.535364 3_2:+66362760 Msa0418580:CDS
TTATTAGCAAAGGGGCTGAA+AGG 0.536922 3_2:+66358735 Msa0418580:intron
ATGCAAAGGCAATACAAGAA+AGG 0.538599 3_2:+66364545 Msa0418580:three_prime_UTR
GACTCAAGCTCTTCATACTC+TGG 0.539130 3_2:-66363719 None:intergenic
ATGACTATGAACTCCAACTC+TGG 0.543976 3_2:+66363480 Msa0418580:CDS
CCAATCCATCAACAGCAAAA+GGG 0.547802 3_2:-66363382 None:intergenic
CCCAATCCCTTTACCACGGA+GGG 0.549341 3_2:-66361292 None:intergenic
TACTATGCAAAGGTCCACTT+GGG 0.549633 3_2:-66361771 None:intergenic
TTTAGAATTGAACTCTGCAG+TGG 0.550510 3_2:-66357086 None:intergenic
AGTGGCATAAGTCTTGGTGT+TGG 0.551056 3_2:-66362609 None:intergenic
GGACTTCTTTCCACCAGAGT+TGG 0.552594 3_2:-66363493 None:intergenic
AGAGTATAAGGCAATTTCAC+TGG 0.553038 3_2:-66363989 None:intergenic
TTTGGTCTCCATAAACACTT+GGG 0.553303 3_2:-66362329 None:intergenic
CTCCTGTTTCTACAAGATGA+TGG 0.553973 3_2:+66362638 Msa0418580:CDS
ATCATCAACTAGTTAGCCAT+TGG 0.556688 3_2:+66362816 Msa0418580:CDS
GAATTGAACTCTGCAGTGGA+GGG 0.560537 3_2:-66357082 None:intergenic
GTAGTGTTTAGGTATTGGCT+TGG 0.560740 3_2:+66357293 Msa0418580:intron
TTGGCAGGTAACCTGCATAA+GGG 0.562312 3_2:-66363652 None:intergenic
TTTCAGATGGATATGCTGTT+GGG 0.562946 3_2:-66364070 None:intergenic
AAGTGGCATGCTTGGAGAGG+TGG 0.564306 3_2:+66358769 Msa0418580:CDS
AGAATTGAACTCTGCAGTGG+AGG 0.564548 3_2:-66357083 None:intergenic
CACATATGTTTGGTTCGTGA+CGG 0.565565 3_2:-66364196 None:intergenic
GTCTAGGCATTCGACTGAAG+AGG 0.565700 3_2:+66363820 Msa0418580:CDS
CATTGATAGAAGTTCTGTCT+AGG 0.566059 3_2:+66363804 Msa0418580:CDS
TATGCACGTCCTGTTATTGG+AGG 0.567131 3_2:+66361390 Msa0418580:CDS
AGCTTGGACTATTTAAAGGA+AGG 0.567876 3_2:-66364430 None:intergenic
GACTTGGGAACTCCAGATGA+TGG 0.568774 3_2:+66361360 Msa0418580:CDS
GATTGGGAAACTTAATGAGT+GGG 0.571518 3_2:+66361308 Msa0418580:CDS
CGTCAGGCACAGGGAATCTG+AGG 0.571634 3_2:-66361858 None:intergenic
TGGAAAGAAGTCCGCAATGA+GGG 0.572321 3_2:+66363503 Msa0418580:CDS
ATGGGATGCAATTGAAACTT+GGG 0.572488 3_2:+66363409 Msa0418580:CDS
GAAAGGGAAACATGGAAAAG+TGG 0.573606 3_2:+66358752 Msa0418580:CDS
CCTGTGCCTGACGTGATCAA+AGG 0.574820 3_2:+66361868 Msa0418580:CDS
ACATAGAAAATAGTTTAGAC+GGG 0.577772 3_2:+66362373 Msa0418580:CDS
GATAAGTGTATGCCTAGCTA+AGG 0.581024 3_2:-66363034 None:intergenic
GCTCCATGTTGTTCACCTTG+TGG 0.582232 3_2:-66362701 None:intergenic
TGCATATAAATGCCTTAGCT+AGG 0.583152 3_2:+66363022 Msa0418580:CDS
ACCTCTGATTATTCTAGGGA+GGG 0.585554 3_2:+66364025 Msa0418580:CDS
CATCTAGGGTTACTGTCTTG+AGG 0.585735 3_2:-66358920 None:intergenic
ATGCACCATTATTATATGGG+TGG 0.585985 3_2:+66363592 Msa0418580:CDS
CATCCACAAGGTGAACAACA+TGG 0.588457 3_2:+66362698 Msa0418580:CDS
TTGTAGCTAGTAAGACTGCA+TGG 0.588566 3_2:+66361976 Msa0418580:intron
AAGCTTAATTCAATAGCAAG+TGG 0.589339 3_2:-66362671 None:intergenic
GTGTCCTGGAATGTCATCTA+GGG 0.589851 3_2:-66358934 None:intergenic
GGGTCCAGCTTGCTGGCAGG+AGG 0.590471 3_2:-66362309 None:intergenic
ATCGTCCAACGGTTAGTCGT+AGG 0.590754 3_2:+66363675 Msa0418580:CDS
TGCCTGCTAATCTGCTCAAG+AGG 0.591981 3_2:+66363157 Msa0418580:CDS
CACCTCTGATTATTCTAGGG+AGG 0.592228 3_2:+66364024 Msa0418580:CDS
TATGCAAAGGTCCACTTGGG+AGG 0.595917 3_2:-66361768 None:intergenic
GAAGTCCGCAATGAGGGTCA+TGG 0.598469 3_2:+66363509 Msa0418580:CDS
ACTATGAACTCCAACTCTGG+TGG 0.599037 3_2:+66363483 Msa0418580:CDS
TCTTGAGGTAAAATTGGCTA+TGG 0.600403 3_2:-66358905 None:intergenic
TAGAAACAGGAGTGTTCTAG+TGG 0.602943 3_2:-66362627 None:intergenic
TCTTCTCTCAACTTGCGCAG+TGG 0.608433 3_2:-66361258 None:intergenic
AGGCAATACAAGAAAGGCAA+AGG 0.609221 3_2:+66364551 Msa0418580:three_prime_UTR
AAGGGGCTGAAAGGGAAACA+TGG 0.613623 3_2:+66358744 Msa0418580:CDS
CAGCATCTGAAGTCCAATCA+GGG 0.613932 3_2:-66363865 None:intergenic
TCTGATTATTCTAGGGAGGG+TGG 0.616659 3_2:+66364028 Msa0418580:CDS
TAAATTTGCATTGGAAATGT+CGG 0.617266 3_2:+66363095 Msa0418580:CDS
CGTAGGTTTATGCCTGAGCA+AGG 0.621400 3_2:+66363692 Msa0418580:CDS
TTTCCAATGCAAATTTACCA+GGG 0.625740 3_2:-66363089 None:intergenic
TATGCATGCTACAATGACTT+GGG 0.625848 3_2:+66361345 Msa0418580:CDS
CTTTGATCACGTCAGGCACA+GGG 0.626045 3_2:-66361867 None:intergenic
AAGTTTCCTTATCCGCGTAG+AGG 0.626907 3_2:+66361420 Msa0418580:CDS
AAAATCCTTAGAATATGCAA+AGG 0.628506 3_2:+66364531 Msa0418580:three_prime_UTR
GCGACTTAAAGGATAGGTCA+TGG 0.629220 3_2:+66363531 Msa0418580:CDS
TTATCTTCCATGTGATACAC+CGG 0.631553 3_2:+66361233 Msa0418580:CDS
AATCGCCTAAATGCTGCCAA+TGG 0.632305 3_2:-66363890 None:intergenic
ATACACTTATCAATGCTGGA+GGG 0.636307 3_2:+66363046 Msa0418580:CDS
AGTGGCTCCGGTGTATCACA+TGG 0.636429 3_2:-66361240 None:intergenic
CATACACTTATCAATGCTGG+AGG 0.637914 3_2:+66363045 Msa0418580:CDS
GGATTGGGAAACTTAATGAG+TGG 0.639444 3_2:+66361307 Msa0418580:CDS
ACGCCTTCAATCTAAAGTGT+CGG 0.639497 3_2:-66364164 None:intergenic
GACTGCATGGAGGACTGATG+AGG 0.640401 3_2:+66361989 Msa0418580:CDS
AGTCGCCATGACCCTCATTG+CGG 0.642860 3_2:-66363514 None:intergenic
TGCTTTAGCCAACTGCCACA+CGG 0.644354 3_2:-66362768 None:intergenic
GTTTCCCAATCCCTTTACCA+CGG 0.644963 3_2:-66361296 None:intergenic
GAAGAACTTGCTACCCTCCG+TGG 0.645545 3_2:+66361279 Msa0418580:CDS
CTGTGGGAATGAAAGAGCAA+AGG 0.646874 3_2:+66364488 Msa0418580:three_prime_UTR
TGGAAGAGAAATGCTTGCTG+GGG 0.650436 3_2:+66362016 Msa0418580:CDS
CATGTGTGTAACGATGAGTA+GGG 0.652673 3_2:-66358992 None:intergenic
GTCACGAACCAAACATATGT+GGG 0.654782 3_2:+66364198 Msa0418580:three_prime_UTR
TACACTTATCAATGCTGGAG+GGG 0.655663 3_2:+66363047 Msa0418580:CDS
CTAGATGACATTCCAGGACA+CGG 0.658294 3_2:+66358936 Msa0418580:CDS
TTCACTATGAAGTACTGACA+CGG 0.658854 3_2:-66364287 None:intergenic
TCCCAATCCCTTTACCACGG+AGG 0.660448 3_2:-66361293 None:intergenic
TGCATTGTATCCTTGAAATG+TGG 0.660791 3_2:-66363003 None:intergenic
GTGGAAAGAAGTCCGCAATG+AGG 0.664613 3_2:+66363502 Msa0418580:CDS
GTCATGGCGACTTAAAGGAT+AGG 0.670364 3_2:+66363525 Msa0418580:CDS
AGACGGGCTAACAATAGATG+AGG 0.673101 3_2:+66362389 Msa0418580:CDS
TTACCTGCCAAATCGTCCAA+CGG 0.676858 3_2:+66363664 Msa0418580:CDS
ATAAACCTACGACTAACCGT+TGG 0.677401 3_2:-66363680 None:intergenic
GTGTGTTATTATTAGCAAAG+GGG 0.681021 3_2:+66358727 Msa0418580:intron
AAGGAGTAGCAGCCACCGTG+TGG 0.681369 3_2:+66362753 Msa0418580:CDS
ACCCTCCCTAGAATAATCAG+AGG 0.688724 3_2:-66364026 None:intergenic
TTAAGCTTACCTCATCCACA+AGG 0.695542 3_2:+66362686 Msa0418580:CDS
GAAAAGTGGCATGCTTGGAG+AGG 0.698902 3_2:+66358766 Msa0418580:CDS
ACTTAAAGGATAGGTCATGG+TGG 0.760119 3_2:+66363534 Msa0418580:CDS
CGACTAGTTCTTCCTCTACG+CGG 0.762741 3_2:-66361432 None:intergenic
TTTAGCCAACTGCCACACGG+TGG 0.765531 3_2:-66362765 None:intergenic
TAGCTAGTAAGACTGCATGG+AGG 0.781786 3_2:+66361979 Msa0418580:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAATATAAAATTTAA+TGG - chr3_2:66358110-66358129 None:intergenic 0.0%
!! GTTAAATTAATTAAAAAGTA+GGG - chr3_2:66357811-66357830 None:intergenic 10.0%
!! AGTTAAATTAATTAAAAAGT+AGG - chr3_2:66357812-66357831 None:intergenic 10.0%
!! TTAAATATAAACAAAATAGA+AGG - chr3_2:66358169-66358188 None:intergenic 10.0%
!!! TTAGATTTTTTGATTAAATT+TGG - chr3_2:66358201-66358220 None:intergenic 10.0%
!!! TTTATATCTTAAAAATTTTG+TGG - chr3_2:66360001-66360020 None:intergenic 10.0%
!!! ACAAAATTTTTAAGATATAA+AGG + chr3_2:66360000-66360019 Msa0418580:intron 10.0%
!! AAAAAAAGATAATACTAATA+TGG + chr3_2:66360592-66360611 Msa0418580:intron 10.0%
!!! AATAAAAAAAGTCATTTTTT+TGG + chr3_2:66360674-66360693 Msa0418580:intron 10.0%
!!! AATTAAAAAGTCATTTTTTT+TGG + chr3_2:66360715-66360734 Msa0418580:intron 10.0%
!! TTAAATAATAACAGTAAATC+TGG - chr3_2:66358300-66358319 None:intergenic 15.0%
!! TGAATGTATAATTACTAAAA+TGG - chr3_2:66358521-66358540 None:intergenic 15.0%
!! ATAATGTAGAATTGATTAAA+TGG - chr3_2:66358583-66358602 None:intergenic 15.0%
!! TGAGATAATTAATTTATGTT+TGG - chr3_2:66358611-66358630 None:intergenic 15.0%
!!! GGTAATTTTTTAATTTCTAA+TGG + chr3_2:66359037-66359056 Msa0418580:intron 15.0%
!! AGAAATAAATTCAGATATAT+TGG + chr3_2:66359585-66359604 Msa0418580:intron 15.0%
!!! GAATAACTTTTTTTTTTTTG+AGG - chr3_2:66360070-66360089 None:intergenic 15.0%
!! TATATATGAATGATTATGAA+TGG - chr3_2:66360194-66360213 None:intergenic 15.0%
!!! TTTTTATCTTATTTGATGTT+AGG - chr3_2:66360313-66360332 None:intergenic 15.0%
!!! ATACAGATAGATTTTATAAT+TGG + chr3_2:66360624-66360643 Msa0418580:intron 15.0%
!!! TCACTTTTTTTTTTTTTTGA+AGG - chr3_2:66360933-66360952 None:intergenic 15.0%
!! AAACGAAATACTAAAAAAAT+AGG + chr3_2:66361145-66361164 Msa0418580:intron 15.0%
!! ACTAAAATATAAGCAAAAAA+AGG - chr3_2:66362165-66362184 None:intergenic 15.0%
!! TATTAAAATTTCAAACACTT+TGG - chr3_2:66362876-66362895 None:intergenic 15.0%
!! AAGATAAAAATACAAGAATA+TGG - chr3_2:66364334-66364353 None:intergenic 15.0%
!!! AATATTTTATGGGTCTAATT+TGG - chr3_2:66358228-66358247 None:intergenic 20.0%
!! TTAGACCCATAAAATATTTA+TGG + chr3_2:66358230-66358249 Msa0418580:intron 20.0%
!!! CATGACCATAAATATTTTAT+GGG - chr3_2:66358238-66358257 None:intergenic 20.0%
!!! TCATGACCATAAATATTTTA+TGG - chr3_2:66358239-66358258 None:intergenic 20.0%
!! AAAATTAATTAGTGTGTGTT+TGG - chr3_2:66358703-66358722 None:intergenic 20.0%
!!! ACACACACTAATTAATTTTT+TGG + chr3_2:66358704-66358723 Msa0418580:intron 20.0%
!!! CACACACTAATTAATTTTTT+GGG + chr3_2:66358705-66358724 Msa0418580:intron 20.0%
!! AACACAATTTATTATCAACA+AGG + chr3_2:66359653-66359672 Msa0418580:intron 20.0%
!! AATAAATATTTACGAACAGA+AGG - chr3_2:66359709-66359728 None:intergenic 20.0%
!! TCTTCCTAAAAGTAAAATAA+AGG + chr3_2:66359797-66359816 Msa0418580:intron 20.0%
!!! GTATCCTTTATTTTACTTTT+AGG - chr3_2:66359804-66359823 None:intergenic 20.0%
!!! AAAGTTTTTTTTTTCTTGTG+TGG - chr3_2:66359858-66359877 None:intergenic 20.0%
!!! ATATGGAACAACTTTTTATT+TGG + chr3_2:66359974-66359993 Msa0418580:intron 20.0%
!!! GAATGGAATTTTTTTTTTGA+GGG - chr3_2:66360177-66360196 None:intergenic 20.0%
!!! TGAATGGAATTTTTTTTTTG+AGG - chr3_2:66360178-66360197 None:intergenic 20.0%
!! TATTTAAAAGATGTTGAGAT+TGG - chr3_2:66360469-66360488 None:intergenic 20.0%
!!! ACAATAAAAGTATAGACTTT+TGG - chr3_2:66360777-66360796 None:intergenic 20.0%
!!! TCTATATGTAGTTTGTTTTA+CGG + chr3_2:66360858-66360877 Msa0418580:intron 20.0%
!! TAAAAATCTCATAAGGAATA+AGG - chr3_2:66361807-66361826 None:intergenic 20.0%
!! TTAACCTTCCTTTAATAAAA+TGG + chr3_2:66361904-66361923 Msa0418580:intron 20.0%
!!! CAATGATTCCATTTTATTAA+AGG - chr3_2:66361915-66361934 None:intergenic 20.0%
!! AATGTTTCATGTAAAATTCA+AGG - chr3_2:66362239-66362258 None:intergenic 20.0%
!!! CGTTTTTTTTTTTTTCCAAT+AGG - chr3_2:66363238-66363257 None:intergenic 20.0%
!!! AATAGAATTACAATTTGCTT+AGG - chr3_2:66363285-66363304 None:intergenic 20.0%
!! TTGAGAATAATATCATGAAA+AGG + chr3_2:66363933-66363952 Msa0418580:CDS 20.0%
!! TAAAAATACAAGAATATGGT+AGG - chr3_2:66364330-66364349 None:intergenic 20.0%
! CTAATAGCAATTGGAAAATT+TGG - chr3_2:66357122-66357141 None:intergenic 25.0%
! TCTATCAAGAAAAGAGATAT+TGG - chr3_2:66357170-66357189 None:intergenic 25.0%
! TGGAGATGAATTACAAAAAA+AGG + chr3_2:66357335-66357354 Msa0418580:CDS 25.0%
! GGAGATGAATTACAAAAAAA+GGG + chr3_2:66357336-66357355 Msa0418580:CDS 25.0%
! AATTACAAAAAAAGGGTTAG+AGG + chr3_2:66357343-66357362 Msa0418580:CDS 25.0%
! ATTACAAAAAAAGGGTTAGA+GGG + chr3_2:66357344-66357363 Msa0418580:CDS 25.0%
! TTTAATGAAGAAAAGCTTGT+TGG + chr3_2:66357375-66357394 Msa0418580:CDS 25.0%
! TATATAGTAGTACAAGCTTA+TGG - chr3_2:66357528-66357547 None:intergenic 25.0%
! TGTGTAATAAAGATCTGATT+CGG + chr3_2:66357730-66357749 Msa0418580:intron 25.0%
! TTCTGTTGTACTAATATTAG+TGG + chr3_2:66357777-66357796 Msa0418580:intron 25.0%
! TCTAATCATATTATTGCTTC+TGG - chr3_2:66357915-66357934 None:intergenic 25.0%
! AGGACAATAAAGGAAAATAA+TGG - chr3_2:66358140-66358159 None:intergenic 25.0%
! AACAAAATAGAAGGAGATAA+AGG - chr3_2:66358160-66358179 None:intergenic 25.0%
! GTAAAGAAAAATCCAAAACT+TGG - chr3_2:66358266-66358285 None:intergenic 25.0%
! ATAATAACAGTAAATCTGGA+CGG - chr3_2:66358296-66358315 None:intergenic 25.0%
! CATAGCTAAATACAAATAAC+TGG - chr3_2:66358497-66358516 None:intergenic 25.0%
! GTAGAATTGATTAAATGGAA+TGG - chr3_2:66358578-66358597 None:intergenic 25.0%
! AATTCTCAGTTACATTTGAT+TGG + chr3_2:66358832-66358851 Msa0418580:CDS 25.0%
! ATTCTCAGTTACATTTGATT+GGG + chr3_2:66358833-66358852 Msa0418580:CDS 25.0%
!!! TCTCAAAAGTTGTTGATTTT+TGG - chr3_2:66359105-66359124 None:intergenic 25.0%
!!! TCTACTTTTCCTTTGAAAAT+TGG - chr3_2:66359134-66359153 None:intergenic 25.0%
! TGTATAGAAAAGATGGTATA+TGG + chr3_2:66359361-66359380 Msa0418580:intron 25.0%
! CATTCAAGAATTAAGATGTA+TGG + chr3_2:66359522-66359541 Msa0418580:intron 25.0%
! AATTCAGATATATTGGTCAT+TGG + chr3_2:66359592-66359611 Msa0418580:intron 25.0%
! AAATAAGTTTCTTGTGTTCA+AGG - chr3_2:66359777-66359796 None:intergenic 25.0%
! GTAAACATAATAGATAGAGA+GGG - chr3_2:66360092-66360111 None:intergenic 25.0%
!!! TTTTTTTTTGAGGGAATGAA+TGG - chr3_2:66360168-66360187 None:intergenic 25.0%
!! TTATCTTATTTGATGTTAGG+CGG - chr3_2:66360310-66360329 None:intergenic 25.0%
! AAGTTAACCTTATTATCAGT+TGG + chr3_2:66360546-66360565 Msa0418580:intron 25.0%
! AAATCAACCAACTGATAATA+AGG - chr3_2:66360556-66360575 None:intergenic 25.0%
! TATCACTACAAATTAAGTGA+CGG + chr3_2:66360902-66360921 Msa0418580:intron 25.0%
! GTCTAATCAATAATTGTTCT+AGG - chr3_2:66361014-66361033 None:intergenic 25.0%
! ACACTTATCATATCACAATA+TGG - chr3_2:66361099-66361118 None:intergenic 25.0%
! GAACATAAATGTTTAGATTC+AGG - chr3_2:66361582-66361601 None:intergenic 25.0%
! CATAAATATCAAGTACATCT+TGG - chr3_2:66361735-66361754 None:intergenic 25.0%
! GATGTACTTGATATTTATGA+AGG + chr3_2:66361736-66361755 Msa0418580:CDS 25.0%
!! TCTCTAATTTTACTATGCAA+AGG - chr3_2:66361784-66361803 None:intergenic 25.0%
!! AGTTCTCTAAAAATCTCATA+AGG - chr3_2:66361814-66361833 None:intergenic 25.0%
!!! AGATTTTTAGAGAACTTGTT+AGG + chr3_2:66361818-66361837 Msa0418580:CDS 25.0%
!! GATTCCATTTTATTAAAGGA+AGG - chr3_2:66361911-66361930 None:intergenic 25.0%
! ATATGTACTTCGTCTAAATT+CGG - chr3_2:66362141-66362160 None:intergenic 25.0%
! CACATAGAAAATAGTTTAGA+CGG + chr3_2:66362372-66362391 Msa0418580:CDS 25.0%
! ACATAGAAAATAGTTTAGAC+GGG + chr3_2:66362373-66362392 Msa0418580:CDS 25.0%
!! TTTTGTGAATAACATACCAA+TGG - chr3_2:66362835-66362854 None:intergenic 25.0%
! CTGTTTGTAGCTATTATAAA+TGG - chr3_2:66362943-66362962 None:intergenic 25.0%
! TAAATTTGCATTGGAAATGT+CGG + chr3_2:66363095-66363114 Msa0418580:CDS 25.0%
! GGCTGTTGTATATAAAAATT+GGG + chr3_2:66363116-66363135 Msa0418580:CDS 25.0%
!! TACAATTTGCTTAGGTAAAT+TGG - chr3_2:66363277-66363296 None:intergenic 25.0%
!! ATTTCATTTGAAACTTTCAG+AGG + chr3_2:66363302-66363321 Msa0418580:intron 25.0%
! AATCATGCACCATTATTATA+TGG + chr3_2:66363588-66363607 Msa0418580:CDS 25.0%
! ATCATGCACCATTATTATAT+GGG + chr3_2:66363589-66363608 Msa0418580:CDS 25.0%
!!! GTTTTTAAGAATGCTAATTC+AGG - chr3_2:66363749-66363768 None:intergenic 25.0%
! GTCTTCAAATTATCATATGT+TGG + chr3_2:66364403-66364422 Msa0418580:three_prime_UTR 25.0%
! AAAATCCTTAGAATATGCAA+AGG + chr3_2:66364531-66364550 Msa0418580:three_prime_UTR 25.0%
!! AATGTCTAATTTGCAAGAAA+TGG - chr3_2:66364591-66364610 None:intergenic 25.0%
GCAGAGTTCAATTCTAAATA+AGG + chr3_2:66357091-66357110 Msa0418580:five_prime_UTR 30.0%
TACGTACTACTAATAGCAAT+TGG - chr3_2:66357131-66357150 None:intergenic 30.0%
AAGTAAGAATCAGACATTAG+AGG - chr3_2:66357199-66357218 None:intergenic 30.0%
ACAAGTGTATCAGTACAAAT+AGG - chr3_2:66357267-66357286 None:intergenic 30.0%
!!! CTTGTTTTGAAGTAGTGTTT+AGG + chr3_2:66357282-66357301 Msa0418580:intron 30.0%
TTGAAGTAGTGTTTAGGTAT+TGG + chr3_2:66357288-66357307 Msa0418580:intron 30.0%
! TGATCGAATTGATGAGTTTT+TGG + chr3_2:66357426-66357445 Msa0418580:CDS 30.0%
! GATCGAATTGATGAGTTTTT+GGG + chr3_2:66357427-66357446 Msa0418580:CDS 30.0%
AAGTCAAGTCAACTACATTA+TGG + chr3_2:66357688-66357707 Msa0418580:intron 30.0%
TAATATGATTAGAGCCTGTT+TGG + chr3_2:66357922-66357941 Msa0418580:intron 30.0%
TTCTTGTAAACTCAAAAGCT+AGG - chr3_2:66358079-66358098 None:intergenic 30.0%
AAGGAGATAAAGGACAATAA+AGG - chr3_2:66358150-66358169 None:intergenic 30.0%
TAAATGGAATGGATGTTGTT+TGG - chr3_2:66358567-66358586 None:intergenic 30.0%
! GGTGTGTTATTATTAGCAAA+GGG + chr3_2:66358726-66358745 Msa0418580:intron 30.0%
! GTGTGTTATTATTAGCAAAG+GGG + chr3_2:66358727-66358746 Msa0418580:intron 30.0%
TTACTGTCTTGAGGTAAAAT+TGG - chr3_2:66358914-66358933 None:intergenic 30.0%
!! TAACTTTTGTTTGCAACTCT+TGG + chr3_2:66358964-66358983 Msa0418580:CDS 30.0%
!! AACTTTTGTTTGCAACTCTT+GGG + chr3_2:66358965-66358984 Msa0418580:CDS 30.0%
! AGACAACTACCAATTTTCAA+AGG + chr3_2:66359122-66359141 Msa0418580:intron 30.0%
AAGAGATAAAGTTGTCACAT+AGG + chr3_2:66359210-66359229 Msa0418580:intron 30.0%
TTGGGTTTATTTAATCCACA+TGG + chr3_2:66359336-66359355 Msa0418580:intron 30.0%
! TCTTTTCTATACATTCCATG+TGG - chr3_2:66359354-66359373 None:intergenic 30.0%
CATGGAATGTATAGAAAAGA+TGG + chr3_2:66359354-66359373 Msa0418580:intron 30.0%
!! AACTGTCAAGTTGAATTCAA+TGG + chr3_2:66359475-66359494 Msa0418580:intron 30.0%
CAAGAATTAAGATGTATGGT+TGG + chr3_2:66359526-66359545 Msa0418580:intron 30.0%
!! TTTCGTTCGTTTCTGAAATA+TGG + chr3_2:66359957-66359976 Msa0418580:intron 30.0%
CGTAAACATAATAGATAGAG+AGG - chr3_2:66360093-66360112 None:intergenic 30.0%
!!! CAGCAATTTCTTTTTTGAAG+AGG + chr3_2:66360339-66360358 Msa0418580:intron 30.0%
TCAATGTTTCTTCTACATGT+AGG + chr3_2:66362281-66362300 Msa0418580:intron 30.0%
! TATTTTCTATGTGCTTTGCT+TGG - chr3_2:66362365-66362384 None:intergenic 30.0%
ATCAAACTTCTTTATGTTGC+AGG + chr3_2:66362511-66362530 Msa0418580:intron 30.0%
GAGTTTATTCTACTTAGGTA+TGG - chr3_2:66362587-66362606 None:intergenic 30.0%
TGGTAGAGTTTATTCTACTT+AGG - chr3_2:66362592-66362611 None:intergenic 30.0%
AAGCTTAATTCAATAGCAAG+TGG - chr3_2:66362674-66362693 None:intergenic 30.0%
TTTCCAATGCAAATTTACCA+GGG - chr3_2:66363092-66363111 None:intergenic 30.0%
ATTTCCAATGCAAATTTACC+AGG - chr3_2:66363093-66363112 None:intergenic 30.0%
CGGCTGTTGTATATAAAAAT+TGG + chr3_2:66363115-66363134 Msa0418580:CDS 30.0%
!! TGTTGATGGATTGGAAATAT+GGG + chr3_2:66363391-66363410 Msa0418580:CDS 30.0%
! TCAATTCTAGTCTTCATTTG+TGG - chr3_2:66363560-66363579 None:intergenic 30.0%
CATTTCTGTTCTTCAAACTT+GGG - chr3_2:66363967-66363986 None:intergenic 30.0%
CAAGTTTGAAGAACAGAAAT+GGG + chr3_2:66363966-66363985 Msa0418580:CDS 30.0%
TAGCAAGAATTCAAAGAGAA+TGG - chr3_2:66364096-66364115 None:intergenic 30.0%
AATGAGCTTGGACTATTTAA+AGG - chr3_2:66364437-66364456 None:intergenic 30.0%
ATTCGTAATACTTTCTGAAC+TGG + chr3_2:66364454-66364473 Msa0418580:three_prime_UTR 30.0%
TATTGCCTTTGCATATTCTA+AGG - chr3_2:66364539-66364558 None:intergenic 30.0%
! TTTAGAATTGAACTCTGCAG+TGG - chr3_2:66357089-66357108 None:intergenic 35.0%
GTACGTAACAAGAAGAATCA+TGG + chr3_2:66357315-66357334 Msa0418580:exon 35.0%
!! GAACGTTTGATTTGATGTCA+TGG - chr3_2:66357405-66357424 None:intergenic 35.0%
!! AATTGATGAGTTTTTGGGCA+AGG + chr3_2:66357432-66357451 Msa0418580:CDS 35.0%
!! ATTGATGAGTTTTTGGGCAA+GGG + chr3_2:66357433-66357452 Msa0418580:CDS 35.0%
GCTTATGGTGAAATTAAGCA+AGG - chr3_2:66357513-66357532 None:intergenic 35.0%
ACAGATTTACAACTTGCAAC+AGG - chr3_2:66357659-66357678 None:intergenic 35.0%
! GGGTGTGTTATTATTAGCAA+AGG + chr3_2:66358725-66358744 Msa0418580:intron 35.0%
TTTCTGATTATGAAAGCTCC+TGG - chr3_2:66358879-66358898 None:intergenic 35.0%
TCTTGAGGTAAAATTGGCTA+TGG - chr3_2:66358908-66358927 None:intergenic 35.0%
GAGTTGCAAACAAAAGTTAC+AGG - chr3_2:66358963-66358982 None:intergenic 35.0%
! TCGTGTTTTCTTTGCAAACA+AGG + chr3_2:66359016-66359035 Msa0418580:CDS 35.0%
AGGAAAAGTAGATAGTGACA+CGG + chr3_2:66359142-66359161 Msa0418580:intron 35.0%
ACTTTCTCTCTCTATTGCTT+TGG - chr3_2:66359171-66359190 None:intergenic 35.0%
TCACATAGGTTGTCACAAAA+TGG + chr3_2:66359224-66359243 Msa0418580:intron 35.0%
! CAAGTTGAATTCAATGGCTT+TGG + chr3_2:66359481-66359500 Msa0418580:intron 35.0%
!! AGAAGCATGTTTTGTGATAC+AGG + chr3_2:66361209-66361228 Msa0418580:intron 35.0%
TTATCTTCCATGTGATACAC+CGG + chr3_2:66361233-66361252 Msa0418580:CDS 35.0%
GATTGGGAAACTTAATGAGT+GGG + chr3_2:66361308-66361327 Msa0418580:CDS 35.0%
TATGCATGCTACAATGACTT+GGG + chr3_2:66361345-66361364 Msa0418580:CDS 35.0%
! TTTTGTGATCCTCCAATAAC+AGG - chr3_2:66361402-66361421 None:intergenic 35.0%
!! TTTGTGTTGCTAACCTGTTT+TGG - chr3_2:66361466-66361485 None:intergenic 35.0%
GCAACACAAACATTAGAGAT+CGG + chr3_2:66361476-66361495 Msa0418580:intron 35.0%
! TGCAATCTTGACTCAGTTTT+AGG - chr3_2:66361556-66361575 None:intergenic 35.0%
!! AGAGAACTTGTTAGGAATGA+TGG + chr3_2:66361826-66361845 Msa0418580:CDS 35.0%
TATATACCTTTGATCACGTC+AGG - chr3_2:66361877-66361896 None:intergenic 35.0%
CAAGGAACATATTGAGAACA+AGG - chr3_2:66362221-66362240 None:intergenic 35.0%
TTTGGTCTCCATAAACACTT+GGG - chr3_2:66362332-66362351 None:intergenic 35.0%
! TTTTGGTCTCCATAAACACT+TGG - chr3_2:66362333-66362352 None:intergenic 35.0%
!! GCTAACTAGTTGATGATATC+CGG - chr3_2:66362813-66362832 None:intergenic 35.0%
ATCATCAACTAGTTAGCCAT+TGG + chr3_2:66362816-66362835 Msa0418580:CDS 35.0%
ATAAACTATGATTCCTGTGC+AGG + chr3_2:66362893-66362912 Msa0418580:intron 35.0%
TGCATTGTATCCTTGAAATG+TGG - chr3_2:66363006-66363025 None:intergenic 35.0%
TGCATATAAATGCCTTAGCT+AGG + chr3_2:66363022-66363041 Msa0418580:CDS 35.0%
ATACACTTATCAATGCTGGA+GGG + chr3_2:66363046-66363065 Msa0418580:CDS 35.0%
TTTCCCTGGTAAATTTGCAT+TGG + chr3_2:66363086-66363105 Msa0418580:CDS 35.0%
!! TCAGAAGTTTTAGTCCATGA+GGG - chr3_2:66363352-66363371 None:intergenic 35.0%
!! ATCAGAAGTTTTAGTCCATG+AGG - chr3_2:66363353-66363372 None:intergenic 35.0%
!! CTGTTGATGGATTGGAAATA+TGG + chr3_2:66363390-66363409 Msa0418580:CDS 35.0%
TATGGGATGCAATTGAAACT+TGG + chr3_2:66363408-66363427 Msa0418580:CDS 35.0%
ATGGGATGCAATTGAAACTT+GGG + chr3_2:66363409-66363428 Msa0418580:CDS 35.0%
ATGCACCATTATTATATGGG+TGG + chr3_2:66363592-66363611 Msa0418580:CDS 35.0%
AGAAGCCACCCATATAATAA+TGG - chr3_2:66363600-66363619 None:intergenic 35.0%
CATTGATAGAAGTTCTGTCT+AGG + chr3_2:66363804-66363823 Msa0418580:CDS 35.0%
CCATTTCTGTTCTTCAAACT+TGG - chr3_2:66363968-66363987 None:intergenic 35.0%
CCAAGTTTGAAGAACAGAAA+TGG + chr3_2:66363965-66363984 Msa0418580:CDS 35.0%
AGAGTATAAGGCAATTTCAC+TGG - chr3_2:66363992-66364011 None:intergenic 35.0%
! TTGGGAAACAGAAGAGTATA+AGG - chr3_2:66364004-66364023 None:intergenic 35.0%
!! CTAGAATAATCAGAGGTGTT+GGG - chr3_2:66364022-66364041 None:intergenic 35.0%
CAACACCTCTGATTATTCTA+GGG + chr3_2:66364021-66364040 Msa0418580:CDS 35.0%
TTTCAGATGGATATGCTGTT+GGG - chr3_2:66364073-66364092 None:intergenic 35.0%
TCAAAGAGAATGGTTTCAGA+TGG - chr3_2:66364086-66364105 None:intergenic 35.0%
TCAAACCAAAGACTTTGCTT+TGG + chr3_2:66364120-66364139 Msa0418580:three_prime_UTR 35.0%
TGAATGTACCCACATATGTT+TGG - chr3_2:66364209-66364228 None:intergenic 35.0%
!! TTCACTATGAAGTACTGACA+CGG - chr3_2:66364290-66364309 None:intergenic 35.0%
AGCTTGGACTATTTAAAGGA+AGG - chr3_2:66364433-66364452 None:intergenic 35.0%
!! GAAAGTATTACGAATGAGCT+TGG - chr3_2:66364449-66364468 None:intergenic 35.0%
ATGCAAAGGCAATACAAGAA+AGG + chr3_2:66364545-66364564 Msa0418580:three_prime_UTR 35.0%
AGAAAGGCAAAGGTGATAAA+AGG + chr3_2:66364561-66364580 Msa0418580:three_prime_UTR 35.0%
TGGAGGGTCATAATGTCATA+TGG - chr3_2:66357069-66357088 None:intergenic 40.0%
!! GTAGTGTTTAGGTATTGGCT+TGG + chr3_2:66357293-66357312 Msa0418580:intron 40.0%
AAAAAGGGTTAGAGGGAAAG+TGG + chr3_2:66357351-66357370 Msa0418580:CDS 40.0%
GTGAAATTAAGCAAGGAGAG+TGG - chr3_2:66357506-66357525 None:intergenic 40.0%
GAAGAGTGAAGAAGAAGCAA+AGG + chr3_2:66357603-66357622 Msa0418580:intron 40.0%
ATGCAGAAGCTAAACCAAAC+AGG - chr3_2:66357939-66357958 None:intergenic 40.0%
GCATCCTTCAAAAGCAATTC+TGG + chr3_2:66357955-66357974 Msa0418580:intron 40.0%
!! GCTACCAGAATTGCTTTTGA+AGG - chr3_2:66357962-66357981 None:intergenic 40.0%
ACTAGCAATTCCAGCATGTT+TGG + chr3_2:66357995-66358014 Msa0418580:intron 40.0%
AGAAGCTAAACCAAACATGC+TGG - chr3_2:66358008-66358027 None:intergenic 40.0%
CTCATCTCCAAAAGCAATTC+TGG + chr3_2:66358039-66358058 Msa0418580:intron 40.0%
! GCTTCAACCAGAATTGCTTT+TGG - chr3_2:66358049-66358068 None:intergenic 40.0%
! GGTCATGAGTTACCAAGTTT+TGG + chr3_2:66358251-66358270 Msa0418580:intron 40.0%
! GTGTGTGTTTGGTTCAACTT+TGG - chr3_2:66358692-66358711 None:intergenic 40.0%
TTATTAGCAAAGGGGCTGAA+AGG + chr3_2:66358735-66358754 Msa0418580:intron 40.0%
TATTAGCAAAGGGGCTGAAA+GGG + chr3_2:66358736-66358755 Msa0418580:intron 40.0%
GAAAGGGAAACATGGAAAAG+TGG + chr3_2:66358752-66358771 Msa0418580:CDS 40.0%
CATGTGTGTAACGATGAGTA+GGG - chr3_2:66358995-66359014 None:intergenic 40.0%
TCATGTGTGTAACGATGAGT+AGG - chr3_2:66358996-66359015 None:intergenic 40.0%
CTGTTGTGACAACTAAGCTT+GGG + chr3_2:66359318-66359337 Msa0418580:intron 40.0%
!! GTTGAATTCAATGGCTTTGG+AGG + chr3_2:66359484-66359503 Msa0418580:intron 40.0%
CAAAGTCATCAGGTCTGTTT+GGG - chr3_2:66360433-66360452 None:intergenic 40.0%
! AGACCTGATGACTTTGGAAA+TGG + chr3_2:66360437-66360456 Msa0418580:intron 40.0%
TGTCCATTTCCAAAGTCATC+AGG - chr3_2:66360443-66360462 None:intergenic 40.0%
GGATTGGGAAACTTAATGAG+TGG + chr3_2:66361307-66361326 Msa0418580:CDS 40.0%
CTATGCATGCTACAATGACT+TGG + chr3_2:66361344-66361363 Msa0418580:CDS 40.0%
ATAACAGGACGTGCATAATC+TGG - chr3_2:66361387-66361406 None:intergenic 40.0%
GATTATGCACGTCCTGTTAT+TGG + chr3_2:66361387-66361406 Msa0418580:CDS 40.0%
!!! TGCTAACCTGTTTTGGTATG+TGG - chr3_2:66361459-66361478 None:intergenic 40.0%
GTTCCAAGAGATGAACAGTT+TGG + chr3_2:66361598-66361617 Msa0418580:CDS 40.0%
TGACCAAACTGTTCATCTCT+TGG - chr3_2:66361604-66361623 None:intergenic 40.0%
TTCACTCAAATCTGTTGCTC+AGG + chr3_2:66361651-66361670 Msa0418580:CDS 40.0%
TACTATGCAAAGGTCCACTT+GGG - chr3_2:66361774-66361793 None:intergenic 40.0%
TTACTATGCAAAGGTCCACT+TGG - chr3_2:66361775-66361794 None:intergenic 40.0%
TTGTAGCTAGTAAGACTGCA+TGG + chr3_2:66361976-66361995 Msa0418580:intron 40.0%
TTTGGAAGAGAAATGCTTGC+TGG + chr3_2:66362014-66362033 Msa0418580:CDS 40.0%
TTGGAAGAGAAATGCTTGCT+GGG + chr3_2:66362015-66362034 Msa0418580:CDS 40.0%
! TTGCTTGGATGGAACTGTTT+TGG - chr3_2:66362350-66362369 None:intergenic 40.0%
TTCTATGTGCTTTGCTTGGA+TGG - chr3_2:66362361-66362380 None:intergenic 40.0%
TGTTCTAGTGGCATAAGTCT+TGG - chr3_2:66362618-66362637 None:intergenic 40.0%
!! TAGAAACAGGAGTGTTCTAG+TGG - chr3_2:66362630-66362649 None:intergenic 40.0%
!! CTCCTGTTTCTACAAGATGA+TGG + chr3_2:66362638-66362657 Msa0418580:CDS 40.0%
TGCCATCATCTTGTAGAAAC+AGG - chr3_2:66362643-66362662 None:intergenic 40.0%
TTAAGCTTACCTCATCCACA+AGG + chr3_2:66362686-66362705 Msa0418580:CDS 40.0%
! GTTTTCACTCCATCACATGA+AGG + chr3_2:66362734-66362753 Msa0418580:CDS 40.0%
TATGCTGCTGTCAATGATTC+CGG + chr3_2:66362791-66362810 Msa0418580:CDS 40.0%
CATGAGTAAATAACCTGCAC+AGG - chr3_2:66362909-66362928 None:intergenic 40.0%
GGCTTCAAGAGCTTATGAAT+TGG - chr3_2:66362985-66363004 None:intergenic 40.0%
GATAAGTGTATGCCTAGCTA+AGG - chr3_2:66363037-66363056 None:intergenic 40.0%
AGGCATACACTTATCAATGC+TGG + chr3_2:66363042-66363061 Msa0418580:CDS 40.0%
CATACACTTATCAATGCTGG+AGG + chr3_2:66363045-66363064 Msa0418580:CDS 40.0%
TACACTTATCAATGCTGGAG+GGG + chr3_2:66363047-66363066 Msa0418580:CDS 40.0%
! CTAGAGAAAACAGTTTTCCC+TGG + chr3_2:66363072-66363091 Msa0418580:CDS 40.0%
TATGCGCACTGTTAGAAGTT+CGG - chr3_2:66363195-66363214 None:intergenic 40.0%
CCAATCCATCAACAGCAAAA+GGG - chr3_2:66363385-66363404 None:intergenic 40.0%
TCCAATCCATCAACAGCAAA+AGG - chr3_2:66363386-66363405 None:intergenic 40.0%
ATGACTATGAACTCCAACTC+TGG + chr3_2:66363480-66363499 Msa0418580:CDS 40.0%
ACTTAAAGGATAGGTCATGG+TGG + chr3_2:66363534-66363553 Msa0418580:CDS 40.0%
TTTCATGCAGCTGTGAACTT+TGG + chr3_2:66363623-66363642 Msa0418580:CDS 40.0%
TTTGGACAATACCCTTATGC+AGG + chr3_2:66363641-66363660 Msa0418580:CDS 40.0%
ATAAACCTACGACTAACCGT+TGG - chr3_2:66363683-66363702 None:intergenic 40.0%
ATGACACACCAAGAAGAGTT+TGG - chr3_2:66363787-66363806 None:intergenic 40.0%
TCGACTGAAGAGGTTTATCT+TGG + chr3_2:66363830-66363849 Msa0418580:CDS 40.0%
! CCTAGAATAATCAGAGGTGT+TGG - chr3_2:66364023-66364042 None:intergenic 40.0%
CCAACACCTCTGATTATTCT+AGG + chr3_2:66364020-66364039 Msa0418580:CDS 40.0%
! ACCTCTGATTATTCTAGGGA+GGG + chr3_2:66364025-66364044 Msa0418580:CDS 40.0%
GTTTCAGATGGATATGCTGT+TGG - chr3_2:66364074-66364093 None:intergenic 40.0%
TGACACCAAAGCAAAGTCTT+TGG - chr3_2:66364128-66364147 None:intergenic 40.0%
TCACCGACACTTTAGATTGA+AGG + chr3_2:66364161-66364180 Msa0418580:three_prime_UTR 40.0%
! ACGCCTTCAATCTAAAGTGT+CGG - chr3_2:66364167-66364186 None:intergenic 40.0%
! CTTTAGATTGAAGGCGTGTT+TGG + chr3_2:66364170-66364189 Msa0418580:three_prime_UTR 40.0%
! CACATATGTTTGGTTCGTGA+CGG - chr3_2:66364199-66364218 None:intergenic 40.0%
GTCACGAACCAAACATATGT+GGG + chr3_2:66364198-66364217 Msa0418580:three_prime_UTR 40.0%
ACACTAGACATGACACTTAC+AGG - chr3_2:66364267-66364286 None:intergenic 40.0%
TCATTCAGACACTCTAGTCT+TGG - chr3_2:66364366-66364385 None:intergenic 40.0%
!!! AACTGGTTTTTGTGCAACTG+TGG + chr3_2:66364471-66364490 Msa0418580:three_prime_UTR 40.0%
!!! ACTGGTTTTTGTGCAACTGT+GGG + chr3_2:66364472-66364491 Msa0418580:three_prime_UTR 40.0%
AGGCAATACAAGAAAGGCAA+AGG + chr3_2:66364551-66364570 Msa0418580:three_prime_UTR 40.0%
GAATTGAACTCTGCAGTGGA+GGG - chr3_2:66357085-66357104 None:intergenic 45.0%
AGAATTGAACTCTGCAGTGG+AGG - chr3_2:66357086-66357105 None:intergenic 45.0%
AGAGTGGAAAAACCTGGATC+AGG - chr3_2:66357490-66357509 None:intergenic 45.0%
ACATGGAAAAGTGGCATGCT+TGG + chr3_2:66358761-66358780 Msa0418580:CDS 45.0%
! TGATTGGGAGCATGAGAAGA+TGG + chr3_2:66358848-66358867 Msa0418580:CDS 45.0%
! GATTGGGAGCATGAGAAGAT+GGG + chr3_2:66358849-66358868 Msa0418580:CDS 45.0%
! CATCTAGGGTTACTGTCTTG+AGG - chr3_2:66358923-66358942 None:intergenic 45.0%
GTAACCCTAGATGACATTCC+AGG + chr3_2:66358930-66358949 Msa0418580:CDS 45.0%
GTGTCCTGGAATGTCATCTA+GGG - chr3_2:66358937-66358956 None:intergenic 45.0%
CTAGATGACATTCCAGGACA+CGG + chr3_2:66358936-66358955 Msa0418580:CDS 45.0%
CCAAGCTTAGTTGTCACAAC+AGG - chr3_2:66359320-66359339 None:intergenic 45.0%
CCTGTTGTGACAACTAAGCT+TGG + chr3_2:66359317-66359336 Msa0418580:intron 45.0%
CCAAAGTCATCAGGTCTGTT+TGG - chr3_2:66360434-66360453 None:intergenic 45.0%
CCAAACAGACCTGATGACTT+TGG + chr3_2:66360431-66360450 Msa0418580:intron 45.0%
GTTTCCCAATCCCTTTACCA+CGG - chr3_2:66361299-66361318 None:intergenic 45.0%
GCATAATCTGGACCATCATC+TGG - chr3_2:66361375-66361394 None:intergenic 45.0%
TATGCACGTCCTGTTATTGG+AGG + chr3_2:66361390-66361409 Msa0418580:CDS 45.0%
AAGTTTCCTTATCCGCGTAG+AGG + chr3_2:66361420-66361439 Msa0418580:CDS 45.0%
AGTCGTCCACATACCAAAAC+AGG + chr3_2:66361450-66361469 Msa0418580:CDS 45.0%
TCACACAGAGATCTAAGCTC+TGG - chr3_2:66361685-66361704 None:intergenic 45.0%
!! GGAAGTTTTAACCTCCCAAG+TGG + chr3_2:66361757-66361776 Msa0418580:CDS 45.0%
TAGCTAGTAAGACTGCATGG+AGG + chr3_2:66361979-66361998 Msa0418580:intron 45.0%
! TGGAAGAGAAATGCTTGCTG+GGG + chr3_2:66362016-66362035 Msa0418580:CDS 45.0%
AAGCTGGACCCAAGTGTTTA+TGG + chr3_2:66362321-66362340 Msa0418580:CDS 45.0%
!! AGACGGGCTAACAATAGATG+AGG + chr3_2:66362389-66362408 Msa0418580:CDS 45.0%
! AGTGGCATAAGTCTTGGTGT+TGG - chr3_2:66362612-66362631 None:intergenic 45.0%
TGTTGTTCACCTTGTGGATG+AGG - chr3_2:66362698-66362717 None:intergenic 45.0%
CATCCACAAGGTGAACAACA+TGG + chr3_2:66362698-66362717 Msa0418580:CDS 45.0%
GCTCTTGAAGCCACATTTCA+AGG + chr3_2:66362993-66363012 Msa0418580:CDS 45.0%
TACCTCTTGAGCAGATTAGC+AGG - chr3_2:66363162-66363181 None:intergenic 45.0%
TGCGCATATGATTACCTCGT+GGG + chr3_2:66363207-66363226 Msa0418580:intron 45.0%
CCATGAGGGCTATTTGAATC+TGG - chr3_2:66363338-66363357 None:intergenic 45.0%
CCAGATTCAAATAGCCCTCA+TGG + chr3_2:66363335-66363354 Msa0418580:CDS 45.0%
!!! GACTACCCTTTTGCTGTTGA+TGG + chr3_2:66363377-66363396 Msa0418580:CDS 45.0%
!!! CCCTTTTGCTGTTGATGGAT+TGG + chr3_2:66363382-66363401 Msa0418580:CDS 45.0%
ACTATGAACTCCAACTCTGG+TGG + chr3_2:66363483-66363502 Msa0418580:CDS 45.0%
TGGAAAGAAGTCCGCAATGA+GGG + chr3_2:66363503-66363522 Msa0418580:CDS 45.0%
GTCATGGCGACTTAAAGGAT+AGG + chr3_2:66363525-66363544 Msa0418580:CDS 45.0%
GCGACTTAAAGGATAGGTCA+TGG + chr3_2:66363531-66363550 Msa0418580:CDS 45.0%
TTGGCAGGTAACCTGCATAA+GGG - chr3_2:66363655-66363674 None:intergenic 45.0%
TTTGGCAGGTAACCTGCATA+AGG - chr3_2:66363656-66363675 None:intergenic 45.0%
TTACCTGCCAAATCGTCCAA+CGG + chr3_2:66363664-66363683 Msa0418580:CDS 45.0%
GACTCAAGCTCTTCATACTC+TGG - chr3_2:66363722-66363741 None:intergenic 45.0%
GCTCAGTTCCAAACTCTTCT+TGG + chr3_2:66363776-66363795 Msa0418580:CDS 45.0%
! CAGCATCTGAAGTCCAATCA+GGG - chr3_2:66363868-66363887 None:intergenic 45.0%
! TCAGCATCTGAAGTCCAATC+AGG - chr3_2:66363869-66363888 None:intergenic 45.0%
GACTTCAGATGCTGAACCAT+TGG + chr3_2:66363874-66363893 Msa0418580:CDS 45.0%
CTGAACCATTGGCAGCATTT+AGG + chr3_2:66363885-66363904 Msa0418580:CDS 45.0%
AATCGCCTAAATGCTGCCAA+TGG - chr3_2:66363893-66363912 None:intergenic 45.0%
! CACCTCTGATTATTCTAGGG+AGG + chr3_2:66364024-66364043 Msa0418580:CDS 45.0%
ACCCTCCCTAGAATAATCAG+AGG - chr3_2:66364029-66364048 None:intergenic 45.0%
! TCTGATTATTCTAGGGAGGG+TGG + chr3_2:66364028-66364047 Msa0418580:CDS 45.0%
CGTCACGAACCAAACATATG+TGG + chr3_2:66364197-66364216 Msa0418580:three_prime_UTR 45.0%
CTGTGGGAATGAAAGAGCAA+AGG + chr3_2:66364488-66364507 Msa0418580:three_prime_UTR 45.0%
!! AACAAAATAAATATAAATAT+AGG + chr3_2:66359438-66359457 Msa0418580:intron 5.0%
!! TATGATTAATATTAAAAAAA+AGG - chr3_2:66359747-66359766 None:intergenic 5.0%
!! TTTCATTAATTAATTAATAT+TGG + chr3_2:66361947-66361966 Msa0418580:intron 5.0%
!!! TTTTTACTTATATTTAAATT+CGG - chr3_2:66362101-66362120 None:intergenic 5.0%
! AGTGTTACTGCTCCTGATCC+AGG + chr3_2:66357475-66357494 Msa0418580:CDS 50.0%
GCAAGGAGAGTGGAAAAACC+TGG - chr3_2:66357496-66357515 None:intergenic 50.0%
AAGGGGCTGAAAGGGAAACA+TGG + chr3_2:66358744-66358763 Msa0418580:CDS 50.0%
GAAAAGTGGCATGCTTGGAG+AGG + chr3_2:66358766-66358785 Msa0418580:CDS 50.0%
CATGAGAAGATGGGAGTTCC+AGG + chr3_2:66358858-66358877 Msa0418580:CDS 50.0%
CGTGTCCTGGAATGTCATCT+AGG - chr3_2:66358938-66358957 None:intergenic 50.0%
AAAGTTACAGGACCGTGTCC+TGG - chr3_2:66358951-66358970 None:intergenic 50.0%
TCTTCTCTCAACTTGCGCAG+TGG - chr3_2:66361261-66361280 None:intergenic 50.0%
TTGCTACCCTCCGTGGTAAA+GGG + chr3_2:66361286-66361305 Msa0418580:CDS 50.0%
GACTTGGGAACTCCAGATGA+TGG + chr3_2:66361360-66361379 Msa0418580:CDS 50.0%
GTTCTTCCTCTACGCGGATA+AGG - chr3_2:66361429-66361448 None:intergenic 50.0%
! CGACTAGTTCTTCCTCTACG+CGG - chr3_2:66361435-66361454 None:intergenic 50.0%
TATGCAAAGGTCCACTTGGG+AGG - chr3_2:66361771-66361790 None:intergenic 50.0%
CTTTGATCACGTCAGGCACA+GGG - chr3_2:66361870-66361889 None:intergenic 50.0%
TGGAGGACTGATGAGGAGTT+TGG + chr3_2:66361996-66362015 Msa0418580:CDS 50.0%
GCTCCATGTTGTTCACCTTG+TGG - chr3_2:66362704-66362723 None:intergenic 50.0%
GCTGCTACTCCTTCATGTGA+TGG - chr3_2:66362746-66362765 None:intergenic 50.0%
TGCTTTAGCCAACTGCCACA+CGG - chr3_2:66362771-66362790 None:intergenic 50.0%
TGCCTGCTAATCTGCTCAAG+AGG + chr3_2:66363157-66363176 Msa0418580:CDS 50.0%
GTGCGCATATGATTACCTCG+TGG + chr3_2:66363206-66363225 Msa0418580:intron 50.0%
GCGCATATGATTACCTCGTG+GGG + chr3_2:66363208-66363227 Msa0418580:intron 50.0%
CGCATATGATTACCTCGTGG+GGG + chr3_2:66363209-66363228 Msa0418580:intron 50.0%
GCATATGATTACCTCGTGGG+GGG + chr3_2:66363210-66363229 Msa0418580:intron 50.0%
GGACTTCTTTCCACCAGAGT+TGG - chr3_2:66363496-66363515 None:intergenic 50.0%
GTGGAAAGAAGTCCGCAATG+AGG + chr3_2:66363502-66363521 Msa0418580:CDS 50.0%
TGAGGGTCATGGCGACTTAA+AGG + chr3_2:66363520-66363539 Msa0418580:CDS 50.0%
! TAACCGTTGGACGATTTGGC+AGG - chr3_2:66363670-66363689 None:intergenic 50.0%
CGACTAACCGTTGGACGATT+TGG - chr3_2:66363674-66363693 None:intergenic 50.0%
! ATCGTCCAACGGTTAGTCGT+AGG + chr3_2:66363675-66363694 Msa0418580:CDS 50.0%
CGTAGGTTTATGCCTGAGCA+AGG + chr3_2:66363692-66363711 Msa0418580:CDS 50.0%
TACTCTGGTGTACCTTGCTC+AGG - chr3_2:66363707-66363726 None:intergenic 50.0%
GTCTAGGCATTCGACTGAAG+AGG + chr3_2:66363820-66363839 Msa0418580:CDS 50.0%
GACAGACAGTAGACCCTGAT+TGG + chr3_2:66363852-66363871 Msa0418580:CDS 50.0%
AAGTGGCATGCTTGGAGAGG+TGG + chr3_2:66358769-66358788 Msa0418580:CDS 55.0%
AGTGGCTCCGGTGTATCACA+TGG - chr3_2:66361243-66361262 None:intergenic 55.0%
!! GAAGAACTTGCTACCCTCCG+TGG + chr3_2:66361279-66361298 Msa0418580:CDS 55.0%
CTTGCTACCCTCCGTGGTAA+AGG + chr3_2:66361285-66361304 Msa0418580:CDS 55.0%
ACCCTCCGTGGTAAAGGGAT+TGG + chr3_2:66361291-66361310 Msa0418580:CDS 55.0%
CCCAATCCCTTTACCACGGA+GGG - chr3_2:66361295-66361314 None:intergenic 55.0%
CCCTCCGTGGTAAAGGGATT+GGG + chr3_2:66361292-66361311 Msa0418580:CDS 55.0%
TCCCAATCCCTTTACCACGG+AGG - chr3_2:66361296-66361315 None:intergenic 55.0%
CCTTTGATCACGTCAGGCAC+AGG - chr3_2:66361871-66361890 None:intergenic 55.0%
CCTGTGCCTGACGTGATCAA+AGG + chr3_2:66361868-66361887 Msa0418580:CDS 55.0%
GACTGCATGGAGGACTGATG+AGG + chr3_2:66361989-66362008 Msa0418580:CDS 55.0%
ATTTCCTCCTGCCAGCAAGC+TGG + chr3_2:66362305-66362324 Msa0418580:CDS 55.0%
AACACTTGGGTCCAGCTTGC+TGG - chr3_2:66362319-66362338 None:intergenic 55.0%
TTTAGCCAACTGCCACACGG+TGG - chr3_2:66362768-66362787 None:intergenic 55.0%
GAAGTCCGCAATGAGGGTCA+TGG + chr3_2:66363509-66363528 Msa0418580:CDS 55.0%
AGTCGCCATGACCCTCATTG+CGG - chr3_2:66363517-66363536 None:intergenic 55.0%
! GCGATTTTCGCAGAAGCTGC+TGG + chr3_2:66363907-66363926 Msa0418580:CDS 55.0%
! GAGGGTGGACTCACTGGTAA+AGG + chr3_2:66364043-66364062 Msa0418580:CDS 55.0%
CTCAACTTGCGCAGTGGCTC+CGG - chr3_2:66361255-66361274 None:intergenic 60.0%
CGTCAGGCACAGGGAATCTG+AGG - chr3_2:66361861-66361880 None:intergenic 60.0%
AAGGAGTAGCAGCCACCGTG+TGG + chr3_2:66362753-66362772 Msa0418580:CDS 60.0%
ACCTCGTGGGGGGAACCTAT+TGG + chr3_2:66363220-66363239 Msa0418580:intron 60.0%
TCCAATAGGTTCCCCCCACG+AGG - chr3_2:66363224-66363243 None:intergenic 60.0%
! TCTAGGGAGGGTGGACTCAC+TGG + chr3_2:66364037-66364056 Msa0418580:CDS 60.0%
!! CTTGGGTCCAGCTTGCTGGC+AGG - chr3_2:66362315-66362334 None:intergenic 65.0%
AGCAGCCACCGTGTGGCAGT+TGG + chr3_2:66362760-66362779 Msa0418580:CDS 65.0%
!! GGGTCCAGCTTGCTGGCAGG+AGG - chr3_2:66362312-66362331 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 66357061 66364626 66357061 ID=Msa0418580;Name=Msa0418580
chr3_2 mRNA 66357061 66364626 66357061 ID=Msa0418580-mRNA-1;Parent=Msa0418580;Name=Msa0418580-mRNA-1;_AED=0.05;_eAED=0.05;_QI=89|1|1|1|0.88|0.8|10|536|856
chr3_2 exon 66357061 66357112 66357061 ID=Msa0418580-mRNA-1:exon:15118;Parent=Msa0418580-mRNA-1
chr3_2 exon 66357297 66357496 66357297 ID=Msa0418580-mRNA-1:exon:15119;Parent=Msa0418580-mRNA-1
chr3_2 exon 66358742 66359037 66358742 ID=Msa0418580-mRNA-1:exon:15120;Parent=Msa0418580-mRNA-1
chr3_2 exon 66361231 66361471 66361231 ID=Msa0418580-mRNA-1:exon:15121;Parent=Msa0418580-mRNA-1
chr3_2 exon 66361551 66361889 66361551 ID=Msa0418580-mRNA-1:exon:15122;Parent=Msa0418580-mRNA-1
chr3_2 exon 66361982 66362067 66361982 ID=Msa0418580-mRNA-1:exon:15123;Parent=Msa0418580-mRNA-1
chr3_2 exon 66362303 66362410 66362303 ID=Msa0418580-mRNA-1:exon:15124;Parent=Msa0418580-mRNA-1
chr3_2 exon 66362533 66362837 66362533 ID=Msa0418580-mRNA-1:exon:15125;Parent=Msa0418580-mRNA-1
chr3_2 exon 66362915 66363178 66362915 ID=Msa0418580-mRNA-1:exon:15126;Parent=Msa0418580-mRNA-1
chr3_2 exon 66363322 66364626 66363322 ID=Msa0418580-mRNA-1:exon:15127;Parent=Msa0418580-mRNA-1
chr3_2 five_prime_UTR 66357061 66357112 66357061 ID=Msa0418580-mRNA-1:five_prime_utr;Parent=Msa0418580-mRNA-1
chr3_2 five_prime_UTR 66357297 66357333 66357297 ID=Msa0418580-mRNA-1:five_prime_utr;Parent=Msa0418580-mRNA-1
chr3_2 CDS 66357334 66357496 66357334 ID=Msa0418580-mRNA-1:cds;Parent=Msa0418580-mRNA-1
chr3_2 CDS 66358742 66359037 66358742 ID=Msa0418580-mRNA-1:cds;Parent=Msa0418580-mRNA-1
chr3_2 CDS 66361231 66361471 66361231 ID=Msa0418580-mRNA-1:cds;Parent=Msa0418580-mRNA-1
chr3_2 CDS 66361551 66361889 66361551 ID=Msa0418580-mRNA-1:cds;Parent=Msa0418580-mRNA-1
chr3_2 CDS 66361982 66362067 66361982 ID=Msa0418580-mRNA-1:cds;Parent=Msa0418580-mRNA-1
chr3_2 CDS 66362303 66362410 66362303 ID=Msa0418580-mRNA-1:cds;Parent=Msa0418580-mRNA-1
chr3_2 CDS 66362533 66362837 66362533 ID=Msa0418580-mRNA-1:cds;Parent=Msa0418580-mRNA-1
chr3_2 CDS 66362915 66363178 66362915 ID=Msa0418580-mRNA-1:cds;Parent=Msa0418580-mRNA-1
chr3_2 CDS 66363322 66364090 66363322 ID=Msa0418580-mRNA-1:cds;Parent=Msa0418580-mRNA-1
chr3_2 three_prime_UTR 66364091 66364626 66364091 ID=Msa0418580-mRNA-1:three_prime_utr;Parent=Msa0418580-mRNA-1
Gene Sequence

>Msa0418580

ATGGAGATGAATTACAAAAAAAGGGTTAGAGGGAAAGTGGTTTTAATGAAGAAAAGCTTGTTGGATTTCCATGACATCAAATCAAACGTTCTTGATCGAATTGATGAGTTTTTGGGCAAGGGTGTTTCACTTCAGCTCATTAGTGTTACTGCTCCTGATCCAGCAAAGGGGCTGAAAGGGAAACATGGAAAAGTGGCATGCTTGGAGAGGTGGATGTCAAGCATATCATCATTGACAACAGCTACAGACACAGAATTCTCAGTTACATTTGATTGGGAGCATGAGAAGATGGGAGTTCCAGGAGCTTTCATAATCAGAAATAATCACCATAGCCAATTTTACCTCAAGACAGTAACCCTAGATGACATTCCAGGACACGGTCCTGTAACTTTTGTTTGCAACTCTTGGGTTTACCCTACTCATCGTTACACACATGATCGTGTTTTCTTTGCAAACAAGGCTTATCTTCCATGTGATACACCGGAGCCACTGCGCAAGTTGAGAGAAGAAGAACTTGCTACCCTCCGTGGTAAAGGGATTGGGAAACTTAATGAGTGGGATAGAGTGTATGACTATGCATGCTACAATGACTTGGGAACTCCAGATGATGGTCCAGATTATGCACGTCCTGTTATTGGAGGATCACAAAAGTTTCCTTATCCGCGTAGAGGAAGAACTAGTCGTCCACATACCAAAACAGATCCTAAAACTGAGTCAAGATTGCATCTCCTGAATCTAAACATTTATGTTCCAAGAGATGAACAGTTTGGTCATGTAAAGTTTTCAGACTTTCTAGCTTATTCACTCAAATCTGTTGCTCAGGTTTTGCTTCCAGAGCTTAGATCTCTGTGTGACAAAACTATTAATGAGTTTGATACTTTCCAAGATGTACTTGATATTTATGAAGGAAGTTTTAACCTCCCAAGTGGACCTTTGCATAGTAAAATTAGAGACCTTATTCCTTATGAGATTTTTAGAGAACTTGTTAGGAATGATGGTGAGAAATTCCTCAGATTCCCTGTGCCTGACGTGATCAAAGCTAGTAAGACTGCATGGAGGACTGATGAGGAGTTTGGAAGAGAAATGCTTGCTGGGGTTAATCCTGTTATCATTCGCCGTCTACAAGAATTTCCTCCTGCCAGCAAGCTGGACCCAAGTGTTTATGGAGACCAAAACAGTTCCATCCAAGCAAAGCACATAGAAAATAGTTTAGACGGGCTAACAATAGATGAGGCTCTTGAAAGTGATAAGCTCTATATATTAGATCATCATGATGCTCTGATGCCATACCTAAGTAGAATAAACTCTACCAACACCAAGACTTATGCCACTAGAACACTCCTGTTTCTACAAGATGATGGCACGTTGAAGCCACTTGCTATTGAATTAAGCTTACCTCATCCACAAGGTGAACAACATGGAGCTGTCAGTAAAGTTTTCACTCCATCACATGAAGGAGTAGCAGCCACCGTGTGGCAGTTGGCTAAAGCATATGCTGCTGTCAATGATTCCGGATATCATCAACTAGTTAGCCATTGGTTATTTACTCATGCAGTGATTGAACCATTTATAATAGCTACAAACAGACAACTGAGTATTCTTCATCCAATTCATAAGCTCTTGAAGCCACATTTCAAGGATACAATGCATATAAATGCCTTAGCTAGGCATACACTTATCAATGCTGGAGGGGTACTAGAGAAAACAGTTTTCCCTGGTAAATTTGCATTGGAAATGTCGGCTGTTGTATATAAAAATTGGGTATTCACTGAACAAGCACTGCCTGCTAATCTGCTCAAGAGAGGCATAGCAGTTCCAGATTCAAATAGCCCTCATGGACTAAAACTTCTGATAGAAGACTACCCTTTTGCTGTTGATGGATTGGAAATATGGGATGCAATTGAAACTTGGGTGAGTGAATATTGTAATTTCTACTACACATCTGATGACATGATTGAGAATGACTATGAACTCCAACTCTGGTGGAAAGAAGTCCGCAATGAGGGTCATGGCGACTTAAAGGATAGGTCATGGTGGCCACAAATGAAGACTAGAATTGAGCTCATACAATCATGCACCATTATTATATGGGTGGCTTCTGCTTTTCATGCAGCTGTGAACTTTGGACAATACCCTTATGCAGGTTACCTGCCAAATCGTCCAACGGTTAGTCGTAGGTTTATGCCTGAGCAAGGTACACCAGAGTATGAAGAGCTTGAGTCAGATCCTGAATTAGCATTCTTAAAAACAATCACAGCTCAGTTCCAAACTCTTCTTGGTGTGTCATTGATAGAAGTTCTGTCTAGGCATTCGACTGAAGAGGTTTATCTTGGACAGACAGTAGACCCTGATTGGACTTCAGATGCTGAACCATTGGCAGCATTTAGGCGATTTTCGCAGAAGCTGCTGGAAATTGAGAATAATATCATGAAAAGGAACAAAGACCCAAGTTTGAAGAACAGAAATGGGCCAGTGAAATTGCCTTATACTCTTCTGTTTCCCAACACCTCTGATTATTCTAGGGAGGGTGGACTCACTGGTAAAGGAATTCCCAACAGCATATCCATCTGA
Protein sequence

>Msa0418580

MEMNYKKRVRGKVVLMKKSLLDFHDIKSNVLDRIDEFLGKGVSLQLISVTAPDPAKGLKGKHGKVACLERWMSSISSLTTATDTEFSVTFDWEHEKMGVPGAFIIRNNHHSQFYLKTVTLDDIPGHGPVTFVCNSWVYPTHRYTHDRVFFANKAYLPCDTPEPLRKLREEELATLRGKGIGKLNEWDRVYDYACYNDLGTPDDGPDYARPVIGGSQKFPYPRRGRTSRPHTKTDPKTESRLHLLNLNIYVPRDEQFGHVKFSDFLAYSLKSVAQVLLPELRSLCDKTINEFDTFQDVLDIYEGSFNLPSGPLHSKIRDLIPYEIFRELVRNDGEKFLRFPVPDVIKASKTAWRTDEEFGREMLAGVNPVIIRRLQEFPPASKLDPSVYGDQNSSIQAKHIENSLDGLTIDEALESDKLYILDHHDALMPYLSRINSTNTKTYATRTLLFLQDDGTLKPLAIELSLPHPQGEQHGAVSKVFTPSHEGVAATVWQLAKAYAAVNDSGYHQLVSHWLFTHAVIEPFIIATNRQLSILHPIHKLLKPHFKDTMHINALARHTLINAGGVLEKTVFPGKFALEMSAVVYKNWVFTEQALPANLLKRGIAVPDSNSPHGLKLLIEDYPFAVDGLEIWDAIETWVSEYCNFYYTSDDMIENDYELQLWWKEVRNEGHGDLKDRSWWPQMKTRIELIQSCTIIIWVASAFHAAVNFGQYPYAGYLPNRPTVSRRFMPEQGTPEYEELESDPELAFLKTITAQFQTLLGVSLIEVLSRHSTEEVYLGQTVDPDWTSDAEPLAAFRRFSQKLLEIENNIMKRNKDPSLKNRNGPVKLPYTLLFPNTSDYSREGGLTGKGIPNSISI*