Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418660 | RHN75972.1 | 80.000 | 45 | 9 | 0 | 112 | 156 | 18 | 62 | 2.88e-16 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418660 | A0A396JFE2 | 80.000 | 45 | 9 | 0 | 112 | 156 | 18 | 62 | 1.37e-16 | 79.3 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0405130 | Msa0418660 | 0.811336 | 7.366688e-51 | -8.615850e-47 |
| Msa0418660 | Msa0802830 | 0.801081 | 1.065389e-48 | -8.615850e-47 |
| Msa0418660 | Msa1002850 | 0.803654 | 3.144814e-49 | -8.615850e-47 |
| Msa0418660 | Msa1075650 | 0.807199 | 5.679843e-50 | -8.615850e-47 |
| Msa0418660 | Msa1101090 | 0.818764 | 1.653071e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418660 | MtrunA17_Chr2g0326961 | 80.000 | 45 | 9 | 0 | 112 | 156 | 18 | 62 | 2.64e-20 | 79.3 |
| Msa0418660 | MtrunA17_Chr3g0119121 | 75.556 | 45 | 11 | 0 | 112 | 156 | 18 | 62 | 2.51e-18 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 59 sgRNAs with CRISPR-Local
Find 537 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTAGTAAGCGGTGGTCATC+TGG | 0.312303 | 3_2:-66473555 | None:intergenic |
| TCTTGGACAACAACAAATTC+TGG | 0.330160 | 3_2:-66480388 | None:intergenic |
| ATGGAGATGGCAAGTAGAAT+GGG | 0.397520 | 3_2:+66479378 | Msa0418660:CDS |
| AAAGAGGAGATGACAGGAAA+TGG | 0.407670 | 3_2:+66480349 | Msa0418660:CDS |
| GGGGAGCTATAGTGGTATTT+CGG | 0.407751 | 3_2:-66473807 | None:intergenic |
| GATGGAGATGGCAAGTAGAA+TGG | 0.409129 | 3_2:+66479377 | Msa0418660:CDS |
| CGATCCTTCGTCGTAATTGT+CGG | 0.417372 | 3_2:-66473722 | None:intergenic |
| CTGGGTACTAGAAGCATTCA+AGG | 0.423069 | 3_2:-66473536 | None:intergenic |
| CGGAGCAACGCTGCCTTCAT+TGG | 0.424487 | 3_2:+66473693 | Msa0418660:CDS |
| TGGTATTTCGGAGAAGGTGC+TGG | 0.434105 | 3_2:-66473795 | None:intergenic |
| TTCGTCGTAATTGTCGGAAA+TGG | 0.435959 | 3_2:-66473716 | None:intergenic |
| GGTTGTGGTTGCACGGTCAT+TGG | 0.449543 | 3_2:-66473603 | None:intergenic |
| TCCATTATTCAGGTTTAAAG+AGG | 0.450189 | 3_2:+66480333 | Msa0418660:intron |
| CGCACATGCAGGCCACTGTC+TGG | 0.455059 | 3_2:+66473577 | Msa0418660:five_prime_UTR |
| TTTGACATTCTGTTGGGTTG+AGG | 0.456197 | 3_2:-66473654 | None:intergenic |
| GTGGCGGTTTGACATTCTGT+TGG | 0.472383 | 3_2:-66473661 | None:intergenic |
| TATCAAGCCTACCAGCATCT+TGG | 0.481083 | 3_2:-66480405 | None:intergenic |
| TGATGATGCAGGTTGTCCAT+TGG | 0.493564 | 3_2:-66481437 | None:intergenic |
| GCTGGTAGGCTTGATACTAT+AGG | 0.498157 | 3_2:+66480412 | Msa0418660:CDS |
| TGCTCCGACGAGAGTGGTGG+CGG | 0.501707 | 3_2:-66473677 | None:intergenic |
| CAGGAAATGGAACGACTGAC+TGG | 0.513505 | 3_2:+66480362 | Msa0418660:CDS |
| TGGCGGTTTGACATTCTGTT+GGG | 0.516844 | 3_2:-66473660 | None:intergenic |
| GAAGATACATCTTAGAATGA+AGG | 0.527516 | 3_2:+66481487 | Msa0418660:CDS |
| GACATTCTGTTGGGTTGAGG+AGG | 0.531506 | 3_2:-66473651 | None:intergenic |
| GGGATCATGAAATAAATGTA+CGG | 0.533889 | 3_2:-66473774 | None:intergenic |
| TCTCAACTAGAGGAGACTAA+TGG | 0.534973 | 3_2:-66473624 | None:intergenic |
| GGATCATGAAATAAATGTAC+GGG | 0.535313 | 3_2:-66473773 | None:intergenic |
| CTCTAAATTTGTGATGATGC+AGG | 0.540156 | 3_2:-66481448 | None:intergenic |
| ACAAGAGTTTGAGCAGAGGA+TGG | 0.541786 | 3_2:+66479359 | Msa0418660:CDS |
| GAATGGGGAAAGAAAGTGAA+TGG | 0.547731 | 3_2:+66479394 | Msa0418660:CDS |
| TTGTCGGAAATGGCCAATGA+AGG | 0.549317 | 3_2:-66473706 | None:intergenic |
| TTTGTTGTTGTCCAAGATGC+TGG | 0.550620 | 3_2:+66480394 | Msa0418660:CDS |
| TGTGGTTGCACGGTCATTGG+TGG | 0.552953 | 3_2:-66473600 | None:intergenic |
| CCGCTTACTACCGCACATGC+AGG | 0.555840 | 3_2:+66473566 | Msa0418660:five_prime_UTR |
| GACTAATGGTTGTGGTTGCA+CGG | 0.559401 | 3_2:-66473610 | None:intergenic |
| AGGTTTAAAGAGGAGATGAC+AGG | 0.564016 | 3_2:+66480343 | Msa0418660:intron |
| TGTTGATCTATATACTCCAA+TGG | 0.569228 | 3_2:+66481421 | Msa0418660:CDS |
| GGTATTTCGGAGAAGGTGCT+GGG | 0.569761 | 3_2:-66473794 | None:intergenic |
| CTAGAGGAGACTAATGGTTG+TGG | 0.570330 | 3_2:-66473618 | None:intergenic |
| AGCACCTACCGGAAAATAGA+CGG | 0.571138 | 3_2:-66473829 | None:intergenic |
| CTATAGTGGTATTTCGGAGA+AGG | 0.572435 | 3_2:-66473801 | None:intergenic |
| GCACCTACCGGAAAATAGAC+GGG | 0.573555 | 3_2:-66473828 | None:intergenic |
| CAGCGTTGCTCCGACGAGAG+TGG | 0.577089 | 3_2:-66473683 | None:intergenic |
| TTGTTGTCCAAGATGCTGGT+AGG | 0.587731 | 3_2:+66480398 | Msa0418660:CDS |
| CAGACAGTGGCCTGCATGTG+CGG | 0.591904 | 3_2:-66473576 | None:intergenic |
| GTTTGAGCAGAGGATGGAGA+TGG | 0.592611 | 3_2:+66479365 | Msa0418660:CDS |
| ATCATCACAAATTTAGAGCA+TGG | 0.599112 | 3_2:+66481453 | Msa0418660:CDS |
| GGTCATTGGTGGCCAGACAG+TGG | 0.605804 | 3_2:-66473589 | None:intergenic |
| GTAGTAAGCGGTGGTCATCT+GGG | 0.607903 | 3_2:-66473554 | None:intergenic |
| CGTTGCTCCGACGAGAGTGG+TGG | 0.607967 | 3_2:-66473680 | None:intergenic |
| TGGAGATGGCAAGTAGAATG+GGG | 0.614081 | 3_2:+66479379 | Msa0418660:CDS |
| GCATGTGCGGTAGTAAGCGG+TGG | 0.619881 | 3_2:-66473563 | None:intergenic |
| AGGAGGTAGATCTCAACTAG+AGG | 0.628475 | 3_2:-66473634 | None:intergenic |
| GATGACAAGAGTTTGAGCAG+AGG | 0.632172 | 3_2:+66479355 | Msa0418660:CDS |
| CACCTACCGGAAAATAGACG+GGG | 0.632793 | 3_2:-66473827 | None:intergenic |
| CCTGCATGTGCGGTAGTAAG+CGG | 0.646885 | 3_2:-66473566 | None:intergenic |
| ATTTCCGACAATTACGACGA+AGG | 0.663595 | 3_2:+66473718 | Msa0418660:CDS |
| CAAACCGCCACCACTCTCGT+CGG | 0.680860 | 3_2:+66473673 | Msa0418660:CDS |
| ACCTACCGGAAAATAGACGG+GGG | 0.746765 | 3_2:-66473826 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAACAAAAAAACATTTTT+TGG | - | chr3_2:66474975-66474994 | None:intergenic | 10.0% |
| !!! | TTGAATTTTATGTTAAAATT+TGG | - | chr3_2:66475992-66476011 | None:intergenic | 10.0% |
| !!! | AAGTTAAATTTTATTTTGAA+AGG | - | chr3_2:66478964-66478983 | None:intergenic | 10.0% |
| !!! | CAAAATAAAATTTAACTTTT+AGG | + | chr3_2:66478966-66478985 | Msa0418660:intron | 10.0% |
| !! | AAATAATAATAAAAACTCAA+AGG | - | chr3_2:66479767-66479786 | None:intergenic | 10.0% |
| !! | TAATTTCAAATAAATAAGTA+TGG | - | chr3_2:66480295-66480314 | None:intergenic | 10.0% |
| !! | AAATATAGAAAAAAAATTCA+TGG | + | chr3_2:66481352-66481371 | Msa0418660:intron | 10.0% |
| !!! | CTATATTTTAGTTATTTCTA+AGG | + | chr3_2:66474071-66474090 | Msa0418660:intron | 15.0% |
| !!! | TTTTATTTTAGTTGAATTGA+AGG | + | chr3_2:66474892-66474911 | Msa0418660:intron | 15.0% |
| !!! | AAATGTTTTTTTGTTTTTGT+TGG | + | chr3_2:66474977-66474996 | Msa0418660:intron | 15.0% |
| !!! | TTGATTTTAAGTTTGAAAAT+GGG | + | chr3_2:66475000-66475019 | Msa0418660:intron | 15.0% |
| !! | TTTGATTAAGAAAATGAAAA+AGG | + | chr3_2:66475131-66475150 | Msa0418660:intron | 15.0% |
| !!! | TTTATGCATTTTAAATTTCT+TGG | - | chr3_2:66475423-66475442 | None:intergenic | 15.0% |
| !!! | AAGAAATTTAAAATGCATAA+AGG | + | chr3_2:66475422-66475441 | Msa0418660:intron | 15.0% |
| !!! | AATGAATTAAAATTGGTAAT+TGG | + | chr3_2:66477402-66477421 | Msa0418660:intron | 15.0% |
| !!! | GCATTTTATTTCAATATTAT+TGG | - | chr3_2:66477880-66477899 | None:intergenic | 15.0% |
| !!! | AGAATTGAATAAGTATTTTT+AGG | + | chr3_2:66477956-66477975 | Msa0418660:intron | 15.0% |
| !!! | CATACTAATAAAGTTTTTAA+TGG | + | chr3_2:66478273-66478292 | Msa0418660:intron | 15.0% |
| !!! | AAGGATTCTTTTTTAAAATA+TGG | - | chr3_2:66478463-66478482 | None:intergenic | 15.0% |
| !!! | TGTTAGTTTTCTTTTTAAAT+GGG | + | chr3_2:66478817-66478836 | Msa0418660:intron | 15.0% |
| !! | TTGTTAAATTAAAAGTTCTA+TGG | - | chr3_2:66478933-66478952 | None:intergenic | 15.0% |
| !! | TATTACATGAATACTATAAT+TGG | - | chr3_2:66479001-66479020 | None:intergenic | 15.0% |
| !! | AATTATAGTATTCATGTAAT+AGG | + | chr3_2:66479000-66479019 | Msa0418660:intron | 15.0% |
| !!! | TTAAAACAACTTTTCTTATT+GGG | - | chr3_2:66479161-66479180 | None:intergenic | 15.0% |
| !!! | ATTAAAACAACTTTTCTTAT+TGG | - | chr3_2:66479162-66479181 | None:intergenic | 15.0% |
| !!! | ATTGAATATTTTATGTCAAA+GGG | - | chr3_2:66479455-66479474 | None:intergenic | 15.0% |
| !!! | TATTGAATATTTTATGTCAA+AGG | - | chr3_2:66479456-66479475 | None:intergenic | 15.0% |
| !!! | AAATAATATAAAGTATTACG+TGG | + | chr3_2:66479934-66479953 | Msa0418660:intron | 15.0% |
| !!! | AATAATATAAAGTATTACGT+GGG | + | chr3_2:66479935-66479954 | Msa0418660:intron | 15.0% |
| !! | GATATATTTATCTAATCAAA+GGG | - | chr3_2:66480483-66480502 | None:intergenic | 15.0% |
| !! | TGATATATTTATCTAATCAA+AGG | - | chr3_2:66480484-66480503 | None:intergenic | 15.0% |
| !! | GTAAATATAGTTTAACAAAA+AGG | - | chr3_2:66481096-66481115 | None:intergenic | 15.0% |
| !! | AAAATAAGATTTAAACCTTT+CGG | + | chr3_2:66481185-66481204 | Msa0418660:intron | 15.0% |
| !! | AGTTAATTCCGAATTTATAA+AGG | - | chr3_2:66473915-66473934 | None:intergenic | 20.0% |
| !!! | TAGCATGTATTTTATCTTTA+TGG | - | chr3_2:66474151-66474170 | None:intergenic | 20.0% |
| !! | AAGAAAAAATAAGATATCAC+CGG | - | chr3_2:66474656-66474675 | None:intergenic | 20.0% |
| !!! | GTGATATCTTATTTTTTCTT+GGG | + | chr3_2:66474656-66474675 | Msa0418660:intron | 20.0% |
| !!! | GTTGATTTTAAGTTTGAAAA+TGG | + | chr3_2:66474999-66475018 | Msa0418660:intron | 20.0% |
| !! | AATGAAAAAGGAAAATACAA+TGG | + | chr3_2:66475143-66475162 | Msa0418660:intron | 20.0% |
| !! | ATGAAAAAGGAAAATACAAT+GGG | + | chr3_2:66475144-66475163 | Msa0418660:intron | 20.0% |
| !!! | CTATTTTCTAAATAAACCTT+GGG | - | chr3_2:66475178-66475197 | None:intergenic | 20.0% |
| !!! | ACTATTTTCTAAATAAACCT+TGG | - | chr3_2:66475179-66475198 | None:intergenic | 20.0% |
| !!! | TTTAGAATGTAAATACTTAG+AGG | - | chr3_2:66475461-66475480 | None:intergenic | 20.0% |
| !! | AAGTATTTACATTCTAAACT+TGG | + | chr3_2:66475463-66475482 | Msa0418660:intron | 20.0% |
| !! | TCTATAGTGTAGAAAAATAA+AGG | + | chr3_2:66475493-66475512 | Msa0418660:intron | 20.0% |
| !! | CTATAGTGTAGAAAAATAAA+GGG | + | chr3_2:66475494-66475513 | Msa0418660:intron | 20.0% |
| !!! | AAAACTCTATAAATTTTCCT+AGG | + | chr3_2:66476097-66476116 | Msa0418660:intron | 20.0% |
| !!! | AAACTCTATAAATTTTCCTA+GGG | + | chr3_2:66476098-66476117 | Msa0418660:intron | 20.0% |
| !! | TAAAACATTTAATCATGCTA+GGG | + | chr3_2:66476126-66476145 | Msa0418660:intron | 20.0% |
| !! | TAGAAATAGCAAAGAAAAAT+TGG | + | chr3_2:66476172-66476191 | Msa0418660:intron | 20.0% |
| !! | ACTATATAAAGGAAAAACAA+AGG | + | chr3_2:66476372-66476391 | Msa0418660:intron | 20.0% |
| !! | CTATATAAAGGAAAAACAAA+GGG | + | chr3_2:66476373-66476392 | Msa0418660:intron | 20.0% |
| !! | TATATAAAGGAAAAACAAAG+GGG | + | chr3_2:66476374-66476393 | Msa0418660:intron | 20.0% |
| !!! | GATGTAAAAAAGTTTTAGAT+CGG | - | chr3_2:66476556-66476575 | None:intergenic | 20.0% |
| !! | AACGATTAAAATTGACAAAA+CGG | + | chr3_2:66477442-66477461 | Msa0418660:intron | 20.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | + | chr3_2:66477969-66477988 | Msa0418660:intron | 20.0% |
| !! | TTGTAGAATGTGAATTATAA+GGG | - | chr3_2:66478020-66478039 | None:intergenic | 20.0% |
| !! | TTAAATAGTAGATATGAGTT+GGG | - | chr3_2:66478131-66478150 | None:intergenic | 20.0% |
| !! | TTTAAATAGTAGATATGAGT+TGG | - | chr3_2:66478132-66478151 | None:intergenic | 20.0% |
| !! | TTATAGTTATTGTATTCTGT+TGG | + | chr3_2:66478215-66478234 | Msa0418660:intron | 20.0% |
| !! | TATAGTTATTGTATTCTGTT+GGG | + | chr3_2:66478216-66478235 | Msa0418660:intron | 20.0% |
| !!! | ACTAATAAAGTTTTTAATGG+AGG | + | chr3_2:66478276-66478295 | Msa0418660:intron | 20.0% |
| !!! | CTAATAAAGTTTTTAATGGA+GGG | + | chr3_2:66478277-66478296 | Msa0418660:intron | 20.0% |
| !!! | TAATAAAGTTTTTAATGGAG+GGG | + | chr3_2:66478278-66478297 | Msa0418660:intron | 20.0% |
| !!! | CTGTTAGTTTTCTTTTTAAA+TGG | + | chr3_2:66478816-66478835 | Msa0418660:intron | 20.0% |
| !! | AAAGATAACAACTATAGATT+CGG | + | chr3_2:66479315-66479334 | Msa0418660:intron | 20.0% |
| !!! | TTGAATATTTTATGTCAAAG+GGG | - | chr3_2:66479454-66479473 | None:intergenic | 20.0% |
| !! | TGACATAAAATATTCAATAG+AGG | + | chr3_2:66479457-66479476 | Msa0418660:intron | 20.0% |
| !!! | AATATTTTAGTTTGATAGTG+TGG | + | chr3_2:66479517-66479536 | Msa0418660:intron | 20.0% |
| !!! | AGTTTTGTTACTATTATATC+AGG | - | chr3_2:66480011-66480030 | None:intergenic | 20.0% |
| !! | AATAGTAACAAAACTATCTT+CGG | + | chr3_2:66480016-66480035 | Msa0418660:intron | 20.0% |
| !! | TTATATTCTGTGTAAAAACT+AGG | - | chr3_2:66480133-66480152 | None:intergenic | 20.0% |
| !! | CATAAAAATATTCCAAAAGT+AGG | - | chr3_2:66480727-66480746 | None:intergenic | 20.0% |
| !!! | CTACTTTTGGAATATTTTTA+TGG | + | chr3_2:66480725-66480744 | Msa0418660:intron | 20.0% |
| !!! | AAAATGCTTTCAATTTTACA+TGG | + | chr3_2:66480837-66480856 | Msa0418660:intron | 20.0% |
| !! | TTGTAAATAATTAACCAATC+TGG | + | chr3_2:66480890-66480909 | Msa0418660:intron | 20.0% |
| !! | GTTAAACTATATTTACACTT+TGG | + | chr3_2:66481100-66481119 | Msa0418660:intron | 20.0% |
| !!! | GGTTTAAATCTTATTTTGAA+AGG | - | chr3_2:66481182-66481201 | None:intergenic | 20.0% |
| ! | ATCCCTTTCCTTTATAAATT+CGG | + | chr3_2:66473904-66473923 | Msa0418660:intron | 25.0% |
| ! | TTCCGAATTTATAAAGGAAA+GGG | - | chr3_2:66473909-66473928 | None:intergenic | 25.0% |
| ! | ATTCCGAATTTATAAAGGAA+AGG | - | chr3_2:66473910-66473929 | None:intergenic | 25.0% |
| ! | CTTTATGGAATTTATAATCC+AGG | - | chr3_2:66474136-66474155 | None:intergenic | 25.0% |
| !!! | ATGATCTGCTTTTCTTTATT+TGG | + | chr3_2:66474364-66474383 | Msa0418660:intron | 25.0% |
| ! | TTACATCAAAAAACCTACAA+GGG | - | chr3_2:66474504-66474523 | None:intergenic | 25.0% |
| !! | ATTTTGTCTGCTAAGAAATT+TGG | + | chr3_2:66474544-66474563 | Msa0418660:intron | 25.0% |
| !! | TTTTGTCTGCTAAGAAATTT+GGG | + | chr3_2:66474545-66474564 | Msa0418660:intron | 25.0% |
| !!! | AACTGTTTTATCTTGGTTTT+CGG | + | chr3_2:66474595-66474614 | Msa0418660:intron | 25.0% |
| !!! | GGTGATATCTTATTTTTTCT+TGG | + | chr3_2:66474655-66474674 | Msa0418660:intron | 25.0% |
| !!! | TATCTTATTTTTTCTTGGGA+AGG | + | chr3_2:66474660-66474679 | Msa0418660:intron | 25.0% |
| !!! | ATCTTATTTTTTCTTGGGAA+GGG | + | chr3_2:66474661-66474680 | Msa0418660:intron | 25.0% |
| ! | AATTAGTCATTTGCAAAATG+TGG | + | chr3_2:66475083-66475102 | Msa0418660:intron | 25.0% |
| ! | GTATGTTTAGATGAATGTTT+AGG | - | chr3_2:66475254-66475273 | None:intergenic | 25.0% |
| !! | TTCTAGCTATATATCTAAAG+TGG | + | chr3_2:66475303-66475322 | Msa0418660:intron | 25.0% |
| !! | TTTTAAATTTCTTGGCAAAG+AGG | - | chr3_2:66475415-66475434 | None:intergenic | 25.0% |
| ! | AGGAAATTGTTAGTAACATA+AGG | + | chr3_2:66475569-66475588 | Msa0418660:intron | 25.0% |
| ! | AACATAAGGCATAGAAAAAA+AGG | + | chr3_2:66475583-66475602 | Msa0418660:intron | 25.0% |
| ! | GTAAAGCTATTATAACCAAA+AGG | + | chr3_2:66475616-66475635 | Msa0418660:intron | 25.0% |
| !!! | TTCTCATTTCTTTTAAGACT+TGG | - | chr3_2:66475765-66475784 | None:intergenic | 25.0% |
| ! | TAAGTTCACATTAAAATGTG+AGG | - | chr3_2:66475806-66475825 | None:intergenic | 25.0% |
| !! | AAAGAGAATCATTCAAGTTA+TGG | + | chr3_2:66475899-66475918 | Msa0418660:intron | 25.0% |
| !!! | TAAATGTTTTAGAAAACCCT+AGG | - | chr3_2:66476117-66476136 | None:intergenic | 25.0% |
| ! | CTAAAACATTTAATCATGCT+AGG | + | chr3_2:66476125-66476144 | Msa0418660:intron | 25.0% |
| ! | AAAACATTTAATCATGCTAG+GGG | + | chr3_2:66476127-66476146 | Msa0418660:intron | 25.0% |
| ! | ATTCCATAGCAACTATATAA+AGG | + | chr3_2:66476361-66476380 | Msa0418660:intron | 25.0% |
| ! | TTTCCTTTATATAGTTGCTA+TGG | - | chr3_2:66476367-66476386 | None:intergenic | 25.0% |
| !! | TGGACTAAAATGCAATTTTT+AGG | + | chr3_2:66477353-66477372 | Msa0418660:intron | 25.0% |
| !!! | AATGCAATTTTTAGGAGTTT+AGG | + | chr3_2:66477361-66477380 | Msa0418660:intron | 25.0% |
| !!! | TACTTTAAAGTACCTCATTT+AGG | - | chr3_2:66477486-66477505 | None:intergenic | 25.0% |
| !!! | ACTCAGATGCAATTTTAAAA+TGG | + | chr3_2:66477573-66477592 | Msa0418660:intron | 25.0% |
| ! | TTCAAATGCAATTTCGAAAA+TGG | + | chr3_2:66477733-66477752 | Msa0418660:intron | 25.0% |
| !! | TTTTGACATAGAATGAAACA+AGG | + | chr3_2:66477757-66477776 | Msa0418660:intron | 25.0% |
| ! | AGAAAGATATAATTGATCAG+AGG | + | chr3_2:66477902-66477921 | Msa0418660:intron | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | + | chr3_2:66477968-66477987 | Msa0418660:intron | 25.0% |
| !! | TTACTGTTATACCCTAATTT+TGG | - | chr3_2:66477983-66478002 | None:intergenic | 25.0% |
| ! | GTTGTAGAATGTGAATTATA+AGG | - | chr3_2:66478021-66478040 | None:intergenic | 25.0% |
| ! | ATAGTTATTGTATTCTGTTG+GGG | + | chr3_2:66478217-66478236 | Msa0418660:intron | 25.0% |
| ! | ATTAGAATTCTCCTATACTA+AGG | - | chr3_2:66478365-66478384 | None:intergenic | 25.0% |
| ! | GCTAAAATTTAAGTGTAGAT+TGG | + | chr3_2:66478388-66478407 | Msa0418660:intron | 25.0% |
| !! | AAAGAATCCTTTTTCTTTTG+TGG | + | chr3_2:66478472-66478491 | Msa0418660:intron | 25.0% |
| ! | AAACTATCCACAAAAGAAAA+AGG | - | chr3_2:66478482-66478501 | None:intergenic | 25.0% |
| ! | TAAGGGTCAATAACATAAAA+TGG | - | chr3_2:66478856-66478875 | None:intergenic | 25.0% |
| ! | AACATAATTCTCAATCATGA+AGG | + | chr3_2:66479234-66479253 | Msa0418660:intron | 25.0% |
| !! | TGAATATTTTATGTCAAAGG+GGG | - | chr3_2:66479453-66479472 | None:intergenic | 25.0% |
| !! | TTTACACTTTACAGCTATTT+TGG | - | chr3_2:66479499-66479518 | None:intergenic | 25.0% |
| !!! | CTATAAGATTATAGCTTTGT+AGG | + | chr3_2:66479551-66479570 | Msa0418660:intron | 25.0% |
| ! | AATAAAAACTCAAAGGCAAA+TGG | - | chr3_2:66479760-66479779 | None:intergenic | 25.0% |
| ! | AAGTTATATCGTAAGATTAG+TGG | + | chr3_2:66479833-66479852 | Msa0418660:intron | 25.0% |
| ! | AGTTATATCGTAAGATTAGT+GGG | + | chr3_2:66479834-66479853 | Msa0418660:intron | 25.0% |
| ! | ACTCTTACAAAACTTACAAT+GGG | - | chr3_2:66479861-66479880 | None:intergenic | 25.0% |
| ! | ATTTAGAAAATGTAGTTGAG+TGG | + | chr3_2:66479890-66479909 | Msa0418660:intron | 25.0% |
| ! | ATAGTAACAAAACTATCTTC+GGG | + | chr3_2:66480017-66480036 | Msa0418660:intron | 25.0% |
| !!! | ATCTTTAGAATTAAGAGATG+TGG | - | chr3_2:66480098-66480117 | None:intergenic | 25.0% |
| ! | AATGATACAAAATGTGTCAA+GGG | - | chr3_2:66480184-66480203 | None:intergenic | 25.0% |
| ! | ATAAATAAGTATGGAGAAGT+TGG | - | chr3_2:66480286-66480305 | None:intergenic | 25.0% |
| ! | TATAGGTATTTGATAGAATC+TGG | + | chr3_2:66480429-66480448 | Msa0418660:intron | 25.0% |
| ! | AAGTTGCATGCTTAATTTAA+TGG | - | chr3_2:66480577-66480596 | None:intergenic | 25.0% |
| !!! | ATGGTTTTATGTAGCTTTTT+TGG | + | chr3_2:66480856-66480875 | Msa0418660:intron | 25.0% |
| !!! | AGATCAACAAGTTTTGTTAT+TGG | - | chr3_2:66481410-66481429 | None:intergenic | 25.0% |
| CATTCAAGGAAACAAAAAGA+GGG | - | chr3_2:66473525-66473544 | None:intergenic | 30.0% | |
| GGATCATGAAATAAATGTAC+GGG | - | chr3_2:66473776-66473795 | None:intergenic | 30.0% | |
| GGGATCATGAAATAAATGTA+CGG | - | chr3_2:66473777-66473796 | None:intergenic | 30.0% | |
| TGCAACAGATTTACATTCAT+AGG | + | chr3_2:66473980-66473999 | Msa0418660:intron | 30.0% | |
| !! | TCACTTACTTGTTGTTATCA+AGG | - | chr3_2:66474035-66474054 | None:intergenic | 30.0% |
| ATGGAATTTATAATCCAGGT+GGG | - | chr3_2:66474132-66474151 | None:intergenic | 30.0% | |
| TATGGAATTTATAATCCAGG+TGG | - | chr3_2:66474133-66474152 | None:intergenic | 30.0% | |
| AGATTATTAGTCCATTTGTG+TGG | + | chr3_2:66474194-66474213 | Msa0418660:intron | 30.0% | |
| GATTATTAGTCCATTTGTGT+GGG | + | chr3_2:66474195-66474214 | Msa0418660:intron | 30.0% | |
| CATAAGATGATTGTTACTCT+TGG | + | chr3_2:66474285-66474304 | Msa0418660:intron | 30.0% | |
| AAATTGTCATCATGATACAG+TGG | - | chr3_2:66474433-66474452 | None:intergenic | 30.0% | |
| GTTACATCAAAAAACCTACA+AGG | - | chr3_2:66474505-66474524 | None:intergenic | 30.0% | |
| AAACAGTTACCTCTATACTA+AGG | - | chr3_2:66474583-66474602 | None:intergenic | 30.0% | |
| ! | TAGAGGTAACTGTTTTATCT+TGG | + | chr3_2:66474588-66474607 | Msa0418660:intron | 30.0% |
| !! | ACTGTTTTATCTTGGTTTTC+GGG | + | chr3_2:66474596-66474615 | Msa0418660:intron | 30.0% |
| ! | ACGTTTGAACCTTTTTAAAC+CGG | + | chr3_2:66474634-66474653 | Msa0418660:intron | 30.0% |
| !! | AAGATATCACCGGTTTAAAA+AGG | - | chr3_2:66474646-66474665 | None:intergenic | 30.0% |
| TAGGATACTATAGTCGTTAT+GGG | - | chr3_2:66474754-66474773 | None:intergenic | 30.0% | |
| ATAGGATACTATAGTCGTTA+TGG | - | chr3_2:66474755-66474774 | None:intergenic | 30.0% | |
| TAACGACTATAGTATCCTAT+AGG | + | chr3_2:66474755-66474774 | Msa0418660:intron | 30.0% | |
| AATATAAAGACGGTTCCTAT+AGG | - | chr3_2:66474773-66474792 | None:intergenic | 30.0% | |
| TCTTCACTTAGAACATTCTT+AGG | - | chr3_2:66474845-66474864 | None:intergenic | 30.0% | |
| ! | GAATGTTCTAAGTGAAGAAT+TGG | + | chr3_2:66474847-66474866 | Msa0418660:intron | 30.0% |
| !!! | CATTTTTTGGAAGAGAACTA+CGG | - | chr3_2:66474962-66474981 | None:intergenic | 30.0% |
| !! | TTTTGAAGAATGAGAGAAAG+AGG | + | chr3_2:66475025-66475044 | Msa0418660:intron | 30.0% |
| CATGAGATTATGAAATTGTG+AGG | + | chr3_2:66475057-66475076 | Msa0418660:intron | 30.0% | |
| !!! | GTGATGTTGTTCACATTTTT+TGG | + | chr3_2:66475203-66475222 | Msa0418660:intron | 30.0% |
| ! | GAATGTTTAGGCTTTATACT+TGG | - | chr3_2:66475242-66475261 | None:intergenic | 30.0% |
| GCATGTTTAGATGTATGTTT+AGG | - | chr3_2:66475280-66475299 | None:intergenic | 30.0% | |
| CAATGATGTAATAAGGACAA+TGG | - | chr3_2:66475373-66475392 | None:intergenic | 30.0% | |
| ACTAGGTCAATGATGTAATA+AGG | - | chr3_2:66475380-66475399 | None:intergenic | 30.0% | |
| ATTGACCTAGTTACATTCTA+TGG | + | chr3_2:66475389-66475408 | Msa0418660:intron | 30.0% | |
| AAGCTATTATAACCAAAAGG+AGG | + | chr3_2:66475619-66475638 | Msa0418660:intron | 30.0% | |
| TTATAACCAAAAGGAGGAAA+AGG | + | chr3_2:66475625-66475644 | Msa0418660:intron | 30.0% | |
| TTGAAAATGTGTTGAACCAT+GGG | - | chr3_2:66475732-66475751 | None:intergenic | 30.0% | |
| GTGGATAAGTAGTGTAAAAT+AGG | - | chr3_2:66475831-66475850 | None:intergenic | 30.0% | |
| CAATAACGAAAGAGAACAAA+AGG | + | chr3_2:66476684-66476703 | Msa0418660:intron | 30.0% | |
| AATCAAGACAACAAAAGGAA+CGG | - | chr3_2:66476842-66476861 | None:intergenic | 30.0% | |
| ATCAGAATCAAGACAACAAA+AGG | - | chr3_2:66476847-66476866 | None:intergenic | 30.0% | |
| ! | GTTGTCTTGATTCTGATTTT+AGG | + | chr3_2:66476850-66476869 | Msa0418660:intron | 30.0% |
| AGAATTGGAATTGGAATTTC+TGG | + | chr3_2:66477055-66477074 | Msa0418660:intron | 30.0% | |
| TTTCAGATCAAAGAACCAAA+AGG | - | chr3_2:66477133-66477152 | None:intergenic | 30.0% | |
| ATGATGTGTCTTGTAATGAA+TGG | + | chr3_2:66477186-66477205 | Msa0418660:intron | 30.0% | |
| ACAAATAAAAGACTGACATG+TGG | + | chr3_2:66477305-66477324 | Msa0418660:intron | 30.0% | |
| ATTGGCAAAATTCACATGAA+GGG | - | chr3_2:66477862-66477881 | None:intergenic | 30.0% | |
| TATTGGCAAAATTCACATGA+AGG | - | chr3_2:66477863-66477882 | None:intergenic | 30.0% | |
| TAGTTATTGTATTCTGTTGG+GGG | + | chr3_2:66478218-66478237 | Msa0418660:intron | 30.0% | |
| !! | AATAGCTTCATTGACTTGAA+TGG | + | chr3_2:66478319-66478338 | Msa0418660:intron | 30.0% |
| ! | CTTTATGATAGCCTTAGTAT+AGG | + | chr3_2:66478351-66478370 | Msa0418660:intron | 30.0% |
| !!! | TACCCAATTTTTTTTTGCCT+CGG | - | chr3_2:66478415-66478434 | None:intergenic | 30.0% |
| ATTAACTCATGCAAAAAGGA+CGG | - | chr3_2:66478688-66478707 | None:intergenic | 30.0% | |
| TTGCATTAACTCATGCAAAA+AGG | - | chr3_2:66478692-66478711 | None:intergenic | 30.0% | |
| AATCATCAACCATTCTTGAA+TGG | + | chr3_2:66478771-66478790 | Msa0418660:intron | 30.0% | |
| ! | TCTTTTTAAATGGGTGTAGA+TGG | + | chr3_2:66478826-66478845 | Msa0418660:intron | 30.0% |
| CAGACTCAACATAAGATTAA+GGG | - | chr3_2:66478873-66478892 | None:intergenic | 30.0% | |
| ACAGACTCAACATAAGATTA+AGG | - | chr3_2:66478874-66478893 | None:intergenic | 30.0% | |
| GCTATAATCTTATAGCTATG+CGG | - | chr3_2:66479546-66479565 | None:intergenic | 30.0% | |
| ATGGATACCACTATTTAACA+AGG | + | chr3_2:66479684-66479703 | Msa0418660:intron | 30.0% | |
| GCATGTCTTCAAAATAGAAT+TGG | - | chr3_2:66479809-66479828 | None:intergenic | 30.0% | |
| CACTCTTACAAAACTTACAA+TGG | - | chr3_2:66479862-66479881 | None:intergenic | 30.0% | |
| !! | CATTGTAAGTTTTGTAAGAG+TGG | + | chr3_2:66479860-66479879 | Msa0418660:intron | 30.0% |
| !! | TAAGTTTTGTAAGAGTGGTA+TGG | + | chr3_2:66479865-66479884 | Msa0418660:intron | 30.0% |
| GGATGGAATTAAAATCATCA+GGG | - | chr3_2:66480163-66480182 | None:intergenic | 30.0% | |
| GAATGATACAAAATGTGTCA+AGG | - | chr3_2:66480185-66480204 | None:intergenic | 30.0% | |
| !!! | ATCAAATAAGCGTCACTTTT+TGG | - | chr3_2:66480211-66480230 | None:intergenic | 30.0% |
| ! | TTATGTTGCTTCCATTATTC+AGG | + | chr3_2:66480323-66480342 | Msa0418660:intron | 30.0% |
| ! | TCCATTATTCAGGTTTAAAG+AGG | + | chr3_2:66480333-66480352 | Msa0418660:intron | 30.0% |
| TCCTCTTTAAACCTGAATAA+TGG | - | chr3_2:66480337-66480356 | None:intergenic | 30.0% | |
| TGGTATACTATTGCTGAAAA+TGG | + | chr3_2:66480449-66480468 | Msa0418660:intron | 30.0% | |
| GGTATACTATTGCTGAAAAT+GGG | + | chr3_2:66480450-66480469 | Msa0418660:intron | 30.0% | |
| !!! | AGTTGCATTTTTCAAGCAAT+AGG | + | chr3_2:66480604-66480623 | Msa0418660:intron | 30.0% |
| ATTGAAATAGTGAGTCAGAA+AGG | - | chr3_2:66480689-66480708 | None:intergenic | 30.0% | |
| TGACTCACTATTTCAATTGT+GGG | + | chr3_2:66480692-66480711 | Msa0418660:intron | 30.0% | |
| ACTTGAATATAACATGTTGC+TGG | + | chr3_2:66481009-66481028 | Msa0418660:intron | 30.0% | |
| AATACAACAATTAGTCCGAA+AGG | - | chr3_2:66481203-66481222 | None:intergenic | 30.0% | |
| TGTTGATCTATATACTCCAA+TGG | + | chr3_2:66481421-66481440 | Msa0418660:CDS | 30.0% | |
| ! | ATCATCACAAATTTAGAGCA+TGG | + | chr3_2:66481453-66481472 | Msa0418660:CDS | 30.0% |
| GAAGATACATCTTAGAATGA+AGG | + | chr3_2:66481487-66481506 | Msa0418660:CDS | 30.0% | |
| GCATTCAAGGAAACAAAAAG+AGG | - | chr3_2:66473526-66473545 | None:intergenic | 35.0% | |
| ! | ATATACATTAGAGCACCTAC+CGG | - | chr3_2:66473843-66473862 | None:intergenic | 35.0% |
| AAAGGAAAGGGATTATAGTC+TGG | - | chr3_2:66473897-66473916 | None:intergenic | 35.0% | |
| CTTATATTGTACACCTGAGT+TGG | + | chr3_2:66473933-66473952 | Msa0418660:intron | 35.0% | |
| ! | GAAGGTATGATAATGTTGTC+AGG | - | chr3_2:66474097-66474116 | None:intergenic | 35.0% |
| TTCCAACTCTCAACAATTTG+AGG | - | chr3_2:66474224-66474243 | None:intergenic | 35.0% | |
| TGAGAGTTGGAATAAAATCG+AGG | + | chr3_2:66474232-66474251 | Msa0418660:intron | 35.0% | |
| AGGGCAATCTCTATTTAAGA+AGG | - | chr3_2:66474460-66474479 | None:intergenic | 35.0% | |
| TAGCTTCCTTGCATTATTCA+GGG | - | chr3_2:66474479-66474498 | None:intergenic | 35.0% | |
| ATAGCTTCCTTGCATTATTC+AGG | - | chr3_2:66474480-66474499 | None:intergenic | 35.0% | |
| TCTCTTGAACCTTAGTATAG+AGG | + | chr3_2:66474571-66474590 | Msa0418660:intron | 35.0% | |
| ! | TGTTCTAAGTGAAGAATTGG+AGG | + | chr3_2:66474850-66474869 | Msa0418660:intron | 35.0% |
| ! | GTTCTAAGTGAAGAATTGGA+GGG | + | chr3_2:66474851-66474870 | Msa0418660:intron | 35.0% |
| TGGAAAATGAAATGCTCATG+AGG | + | chr3_2:66475531-66475550 | Msa0418660:intron | 35.0% | |
| TGAGGTATGAAACACAATAG+AGG | + | chr3_2:66475549-66475568 | Msa0418660:intron | 35.0% | |
| ACTATGACCTATAATTCCCA+TGG | + | chr3_2:66475713-66475732 | Msa0418660:intron | 35.0% | |
| TGTTGAACCATGGGAATTAT+AGG | - | chr3_2:66475723-66475742 | None:intergenic | 35.0% | |
| CTTGAAAATGTGTTGAACCA+TGG | - | chr3_2:66475733-66475752 | None:intergenic | 35.0% | |
| ! | CTTTTAGTCATGTGCATATG+TGG | - | chr3_2:66475883-66475902 | None:intergenic | 35.0% |
| AAGAAAAATTGGAAAGCCAC+AGG | + | chr3_2:66476183-66476202 | Msa0418660:intron | 35.0% | |
| TACACAAACCTTAGATCCAA+GGG | + | chr3_2:66476290-66476309 | Msa0418660:intron | 35.0% | |
| ! | CGTTTTCGAAAAACTGAAGA+CGG | - | chr3_2:66476611-66476630 | None:intergenic | 35.0% |
| !! | TCTTCAGTTTTTCGAAAACG+AGG | + | chr3_2:66476611-66476630 | Msa0418660:intron | 35.0% |
| ! | CGAATCTCTTGTTTAGATCT+AGG | - | chr3_2:66476646-66476665 | None:intergenic | 35.0% |
| TCAACGAATTCAAACAAGGA+AGG | - | chr3_2:66476798-66476817 | None:intergenic | 35.0% | |
| AAGCTCAACGAATTCAAACA+AGG | - | chr3_2:66476802-66476821 | None:intergenic | 35.0% | |
| ! | GTGTTGTTCTTGATTCTTGT+TGG | + | chr3_2:66476964-66476983 | Msa0418660:intron | 35.0% |
| CTTGATTCTTGTTGGATTGA+TGG | + | chr3_2:66476972-66476991 | Msa0418660:intron | 35.0% | |
| !! | GTTGGATTGATGGATTTGTT+CGG | + | chr3_2:66476982-66477001 | Msa0418660:intron | 35.0% |
| !! | ATTGATGGATTTGTTCGGTT+TGG | + | chr3_2:66476987-66477006 | Msa0418660:intron | 35.0% |
| ! | AACGGTGTTAGAATTGGAAT+TGG | + | chr3_2:66477046-66477065 | Msa0418660:intron | 35.0% |
| !!! | GGAATTTCTGGAATTTTTGC+AGG | + | chr3_2:66477067-66477086 | Msa0418660:intron | 35.0% |
| ! | AGCTATAAAAGCTGACTCAA+AGG | - | chr3_2:66477228-66477247 | None:intergenic | 35.0% |
| ! | GACTATGACTTGGACAAAAA+TGG | + | chr3_2:66477333-66477352 | Msa0418660:intron | 35.0% |
| GGTCATTTCACACGAAATTT+CGG | - | chr3_2:66477520-66477539 | None:intergenic | 35.0% | |
| AAAAGACTAAAATGCCCCTA+AGG | + | chr3_2:66477689-66477708 | Msa0418660:intron | 35.0% | |
| !! | TTGAGTCAGTTTTGTCCTTA+GGG | - | chr3_2:66477707-66477726 | None:intergenic | 35.0% |
| !! | TTTGAGTCAGTTTTGTCCTT+AGG | - | chr3_2:66477708-66477727 | None:intergenic | 35.0% |
| GATTAAAATGAGTCGAATGC+AGG | + | chr3_2:66477821-66477840 | Msa0418660:intron | 35.0% | |
| TTGGCAAAATTCACATGAAG+GGG | - | chr3_2:66477861-66477880 | None:intergenic | 35.0% | |
| GGTTGTTCATCTTGAATCTT+TGG | + | chr3_2:66478239-66478258 | Msa0418660:intron | 35.0% | |
| GACCGAGGCAAAAAAAAATT+GGG | + | chr3_2:66478410-66478429 | Msa0418660:intron | 35.0% | |
| TTTCCTGTCACCTTAAATCT+TGG | + | chr3_2:66478628-66478647 | Msa0418660:intron | 35.0% | |
| TGGTAAACCTCCAAGATTTA+AGG | - | chr3_2:66478641-66478660 | None:intergenic | 35.0% | |
| TATTACCTTGGTTATGGAAG+TGG | - | chr3_2:66478661-66478680 | None:intergenic | 35.0% | |
| !!! | ATGTACCTTTTTTCGACTCT+TGG | + | chr3_2:66478741-66478760 | Msa0418660:intron | 35.0% |
| AGGAGTGGTAAAAAATTGCA+TGG | + | chr3_2:66479081-66479100 | Msa0418660:intron | 35.0% | |
| TACATATCCCTATAGAGAAG+AGG | + | chr3_2:66479129-66479148 | Msa0418660:intron | 35.0% | |
| ! | TATAGATTCGGTTATCTTGC+AGG | + | chr3_2:66479327-66479346 | Msa0418660:intron | 35.0% |
| !! | TATCACAAAAGCACTACAAG+TGG | + | chr3_2:66479574-66479593 | Msa0418660:intron | 35.0% |
| GTGTATTAGAGCACAAACAT+CGG | + | chr3_2:66479625-66479644 | Msa0418660:intron | 35.0% | |
| GATACCACTATTTAACAAGG+TGG | + | chr3_2:66479687-66479706 | Msa0418660:intron | 35.0% | |
| ACTACCACCTTGTTAAATAG+TGG | - | chr3_2:66479694-66479713 | None:intergenic | 35.0% | |
| AAAGGCAAATGGTATGGATA+CGG | - | chr3_2:66479749-66479768 | None:intergenic | 35.0% | |
| AAACTCAAAGGCAAATGGTA+TGG | - | chr3_2:66479755-66479774 | None:intergenic | 35.0% | |
| CTCTACATGGTGGTATAAAT+GGG | - | chr3_2:66479962-66479981 | None:intergenic | 35.0% | |
| ACTCTACATGGTGGTATAAA+TGG | - | chr3_2:66479963-66479982 | None:intergenic | 35.0% | |
| ! | TTGGTTCTCAAAGCAATTGA+AGG | - | chr3_2:66480048-66480067 | None:intergenic | 35.0% |
| AATTAAGAGATGTGGAGTGA+AGG | - | chr3_2:66480090-66480109 | None:intergenic | 35.0% | |
| GGGATGGAATTAAAATCATC+AGG | - | chr3_2:66480164-66480183 | None:intergenic | 35.0% | |
| ATACAAAATGTGTCAAGGGA+TGG | - | chr3_2:66480180-66480199 | None:intergenic | 35.0% | |
| !!! | AATAAGCGTCACTTTTTGGA+AGG | - | chr3_2:66480207-66480226 | None:intergenic | 35.0% |
| TCTTGGACAACAACAAATTC+TGG | - | chr3_2:66480391-66480410 | None:intergenic | 35.0% | |
| CTGACTCACTATTTCAATTG+TGG | + | chr3_2:66480691-66480710 | Msa0418660:intron | 35.0% | |
| GACTCACTATTTCAATTGTG+GGG | + | chr3_2:66480693-66480712 | Msa0418660:intron | 35.0% | |
| AATATAACATGTTGCTGGTG+TGG | + | chr3_2:66481014-66481033 | Msa0418660:intron | 35.0% | |
| AGTTTACACAGCTAACTCAT+GGG | - | chr3_2:66481268-66481287 | None:intergenic | 35.0% | |
| TAGTTTACACAGCTAACTCA+TGG | - | chr3_2:66481269-66481288 | None:intergenic | 35.0% | |
| TGAGTTAGCTGTGTAAACTA+TGG | + | chr3_2:66481269-66481288 | Msa0418660:intron | 35.0% | |
| TAGCTGTGTAAACTATGGAT+TGG | + | chr3_2:66481274-66481293 | Msa0418660:intron | 35.0% | |
| ! | CTCTAAATTTGTGATGATGC+AGG | - | chr3_2:66481451-66481470 | None:intergenic | 35.0% |
| TCTCAACTAGAGGAGACTAA+TGG | - | chr3_2:66473627-66473646 | None:intergenic | 40.0% | |
| ! | TTTGACATTCTGTTGGGTTG+AGG | - | chr3_2:66473657-66473676 | None:intergenic | 40.0% |
| TTCGTCGTAATTGTCGGAAA+TGG | - | chr3_2:66473719-66473738 | None:intergenic | 40.0% | |
| ATTTCCGACAATTACGACGA+AGG | + | chr3_2:66473718-66473737 | Msa0418660:CDS | 40.0% | |
| CTATAGTGGTATTTCGGAGA+AGG | - | chr3_2:66473804-66473823 | None:intergenic | 40.0% | |
| TCTGGATCTGGAAGAAAAAC+TGG | - | chr3_2:66473879-66473898 | None:intergenic | 40.0% | |
| AAGGGATTATAGTCTGGATC+TGG | - | chr3_2:66473891-66473910 | None:intergenic | 40.0% | |
| ATCGACAAACAAACCAACTC+AGG | - | chr3_2:66473949-66473968 | None:intergenic | 40.0% | |
| ATGTCACAAACCAACTGCTA+TGG | - | chr3_2:66474006-66474025 | None:intergenic | 40.0% | |
| GGTGGGATGAAAAGATATGA+AGG | - | chr3_2:66474115-66474134 | None:intergenic | 40.0% | |
| ! | TCATATCTTTTCATCCCACC+TGG | + | chr3_2:66474115-66474134 | Msa0418660:intron | 40.0% |
| TGCCTCAAATTGTTGAGAGT+TGG | + | chr3_2:66474219-66474238 | Msa0418660:intron | 40.0% | |
| TGCAATATCAAACAGTGTGC+AGG | - | chr3_2:66474332-66474351 | None:intergenic | 40.0% | |
| TTGTCATCATGATACAGTGG+TGG | - | chr3_2:66474430-66474449 | None:intergenic | 40.0% | |
| AGATTGCCCTGAATAATGCA+AGG | + | chr3_2:66474470-66474489 | Msa0418660:intron | 40.0% | |
| ! | TGGAGGGAGAAGAATGTTTT+TGG | + | chr3_2:66474867-66474886 | Msa0418660:intron | 40.0% |
| GTGGATTTGATCCCTTAAAC+GGG | - | chr3_2:66474940-66474959 | None:intergenic | 40.0% | |
| ! | GGTGGATTTGATCCCTTAAA+CGG | - | chr3_2:66474941-66474960 | None:intergenic | 40.0% |
| !! | TTTTTGGAAGAGAACTACGG+TGG | - | chr3_2:66474959-66474978 | None:intergenic | 40.0% |
| TTCATAATCTCATGCCCTTG+AGG | - | chr3_2:66475051-66475070 | None:intergenic | 40.0% | |
| !! | ACAATGGGATTTTGATCCCA+AGG | + | chr3_2:66475159-66475178 | Msa0418660:intron | 40.0% |
| AGAGGCCATAGAATGTAACT+AGG | - | chr3_2:66475397-66475416 | None:intergenic | 40.0% | |
| AAAGGGATGAAGATGTGAGA+TGG | + | chr3_2:66475511-66475530 | Msa0418660:intron | 40.0% | |
| AACCAAAAGGAGGAAAAGGA+TGG | + | chr3_2:66475629-66475648 | Msa0418660:intron | 40.0% | |
| ! | ATCCATCCTTTTCCTCCTTT+TGG | - | chr3_2:66475634-66475653 | None:intergenic | 40.0% |
| AGACCTAGAATTCCTCATCA+AGG | + | chr3_2:66475681-66475700 | Msa0418660:intron | 40.0% | |
| TTGCCTTGATGAGGAATTCT+AGG | - | chr3_2:66475687-66475706 | None:intergenic | 40.0% | |
| TAGAATTCCTCATCAAGGCA+AGG | + | chr3_2:66475686-66475705 | Msa0418660:intron | 40.0% | |
| CTTGCTTGCTTTGCAAGTAA+TGG | - | chr3_2:66475856-66475875 | None:intergenic | 40.0% | |
| TGAATCACAAGTGCACTTCA+AGG | + | chr3_2:66475948-66475967 | Msa0418660:intron | 40.0% | |
| CCAACTCAGACTTTGGATTT+GGG | - | chr3_2:66476224-66476243 | None:intergenic | 40.0% | |
| TCCAACTCAGACTTTGGATT+TGG | - | chr3_2:66476225-66476244 | None:intergenic | 40.0% | |
| ! | ATCTAAGGTTTGTGTAGGAC+TGG | - | chr3_2:66476286-66476305 | None:intergenic | 40.0% |
| ! | CTTGGATCTAAGGTTTGTGT+AGG | - | chr3_2:66476291-66476310 | None:intergenic | 40.0% |
| CTACACAAACCTTAGATCCA+AGG | + | chr3_2:66476289-66476308 | Msa0418660:intron | 40.0% | |
| CTAGAATTGTAGAGAGAGAG+AGG | - | chr3_2:66476423-66476442 | None:intergenic | 40.0% | |
| !!! | TCGGAAGAGTTTTGATTCTC+CGG | - | chr3_2:66476537-66476556 | None:intergenic | 40.0% |
| AAGACGTGAAGCATAGCAAA+CGG | - | chr3_2:66476768-66476787 | None:intergenic | 40.0% | |
| TTCTGTGATGTTGAGCTTTG+TGG | + | chr3_2:66476917-66476936 | Msa0418660:intron | 40.0% | |
| GGTGATGAATTCGTGATGAA+CGG | + | chr3_2:66476942-66476961 | Msa0418660:intron | 40.0% | |
| CAAATCCATCACCATCAGTT+CGG | - | chr3_2:66477021-66477040 | None:intergenic | 40.0% | |
| ! | CATCTTGTTCTTGAGCCTTT+TGG | + | chr3_2:66477115-66477134 | Msa0418660:intron | 40.0% |
| ACCAATAACAAACTGCCATG+TGG | + | chr3_2:66477266-66477285 | Msa0418660:intron | 40.0% | |
| CAAAAGTTAGTTACGCCACA+TGG | - | chr3_2:66477284-66477303 | None:intergenic | 40.0% | |
| ! | CATGTGGCGTAACTAACTTT+TGG | + | chr3_2:66477282-66477301 | Msa0418660:intron | 40.0% |
| !! | AACGGACTAAAACGAACCAA+TGG | + | chr3_2:66477460-66477479 | Msa0418660:intron | 40.0% |
| AAGTACCTCATTTAGGCCAT+TGG | - | chr3_2:66477479-66477498 | None:intergenic | 40.0% | |
| AAATGACCAAAATGCCCCTA+GGG | + | chr3_2:66477532-66477551 | Msa0418660:intron | 40.0% | |
| !! | TTTCAGTCGTTTTAGCCCTA+GGG | - | chr3_2:66477550-66477569 | None:intergenic | 40.0% |
| !! | TTTTCAGTCGTTTTAGCCCT+AGG | - | chr3_2:66477551-66477570 | None:intergenic | 40.0% |
| !! | TGAGTCAGTTTTGTCCTTAG+GGG | - | chr3_2:66477706-66477725 | None:intergenic | 40.0% |
| TTTAAGTGTAGATTGGACCG+AGG | + | chr3_2:66478395-66478414 | Msa0418660:intron | 40.0% | |
| GGACCGAGGCAAAAAAAAAT+TGG | + | chr3_2:66478409-66478428 | Msa0418660:intron | 40.0% | |
| GTTTACCACTTCCATAACCA+AGG | + | chr3_2:66478653-66478672 | Msa0418660:intron | 40.0% | |
| CAACACCAAGAGTCGAAAAA+AGG | - | chr3_2:66478749-66478768 | None:intergenic | 40.0% | |
| GTTTCAACAACCAACTCATG+GGG | - | chr3_2:66479044-66479063 | None:intergenic | 40.0% | |
| GGTTTCAACAACCAACTCAT+GGG | - | chr3_2:66479045-66479064 | None:intergenic | 40.0% | |
| AGGTTTCAACAACCAACTCA+TGG | - | chr3_2:66479046-66479065 | None:intergenic | 40.0% | |
| GGTTGTTGAAACCTGATGAT+TGG | + | chr3_2:66479052-66479071 | Msa0418660:intron | 40.0% | |
| AACCTGATGATTGGAGACAA+AGG | + | chr3_2:66479061-66479080 | Msa0418660:intron | 40.0% | |
| GTTGTGTCCTCTTCTCTATA+GGG | - | chr3_2:66479139-66479158 | None:intergenic | 40.0% | |
| ATGGAGATGGCAAGTAGAAT+GGG | + | chr3_2:66479378-66479397 | Msa0418660:CDS | 40.0% | |
| GAATGGGGAAAGAAAGTGAA+TGG | + | chr3_2:66479394-66479413 | Msa0418660:CDS | 40.0% | |
| AAAGTGAATGGCAAGTGAAG+AGG | + | chr3_2:66479406-66479425 | Msa0418660:intron | 40.0% | |
| AAAAACACAAGCCTTGCAAG+TGG | + | chr3_2:66479603-66479622 | Msa0418660:intron | 40.0% | |
| TATTAGAGCACAAACATCGG+TGG | + | chr3_2:66479628-66479647 | Msa0418660:intron | 40.0% | |
| TAACAAGGTGGTAGTAGCAT+TGG | + | chr3_2:66479699-66479718 | Msa0418660:intron | 40.0% | |
| TACGGTTCCATTCTTTACCA+CGG | - | chr3_2:66479731-66479750 | None:intergenic | 40.0% | |
| TGGAGAAGTTGGAAACAAAG+TGG | - | chr3_2:66480275-66480294 | None:intergenic | 40.0% | |
| AGGTTTAAAGAGGAGATGAC+AGG | + | chr3_2:66480343-66480362 | Msa0418660:intron | 40.0% | |
| AAAGAGGAGATGACAGGAAA+TGG | + | chr3_2:66480349-66480368 | Msa0418660:CDS | 40.0% | |
| !! | TTTGTTGTTGTCCAAGATGC+TGG | + | chr3_2:66480394-66480413 | Msa0418660:CDS | 40.0% |
| ! | TGGTGGTGATAAGACTGAAT+GGG | - | chr3_2:66480757-66480776 | None:intergenic | 40.0% |
| ATCACCACCAGAATTGATTG+AGG | + | chr3_2:66480767-66480786 | Msa0418660:intron | 40.0% | |
| GTTCTCACCTCAATCAATTC+TGG | - | chr3_2:66480777-66480796 | None:intergenic | 40.0% | |
| GATATTGCCAGCATGATCAA+TGG | - | chr3_2:66480799-66480818 | None:intergenic | 40.0% | |
| GCTTGCATTCTATTCCAGAT+TGG | - | chr3_2:66480907-66480926 | None:intergenic | 40.0% | |
| TGCAATTCCATACCTCTTCT+TGG | - | chr3_2:66481303-66481322 | None:intergenic | 40.0% | |
| !! | CTGGGTACTAGAAGCATTCA+AGG | - | chr3_2:66473539-66473558 | None:intergenic | 45.0% |
| GACTAATGGTTGTGGTTGCA+CGG | - | chr3_2:66473613-66473632 | None:intergenic | 45.0% | |
| CTAGAGGAGACTAATGGTTG+TGG | - | chr3_2:66473621-66473640 | None:intergenic | 45.0% | |
| AGGAGGTAGATCTCAACTAG+AGG | - | chr3_2:66473637-66473656 | None:intergenic | 45.0% | |
| TGGCGGTTTGACATTCTGTT+GGG | - | chr3_2:66473663-66473682 | None:intergenic | 45.0% | |
| TTGTCGGAAATGGCCAATGA+AGG | - | chr3_2:66473709-66473728 | None:intergenic | 45.0% | |
| CGATCCTTCGTCGTAATTGT+CGG | - | chr3_2:66473725-66473744 | None:intergenic | 45.0% | |
| GGGGAGCTATAGTGGTATTT+CGG | - | chr3_2:66473810-66473829 | None:intergenic | 45.0% | |
| AGCACCTACCGGAAAATAGA+CGG | - | chr3_2:66473832-66473851 | None:intergenic | 45.0% | |
| CATTCATAGGCCATAGCAGT+TGG | + | chr3_2:66473993-66474012 | Msa0418660:intron | 45.0% | |
| ! | TTTGAGGCAACCCACACAAA+TGG | - | chr3_2:66474208-66474227 | None:intergenic | 45.0% |
| CAAGGAAGCTATACCCTTGT+AGG | + | chr3_2:66474488-66474507 | Msa0418660:intron | 45.0% | |
| AGCAAAACCCTTGAGAATCG+AGG | + | chr3_2:66474691-66474710 | Msa0418660:intron | 45.0% | |
| GCGCGCGTAGAATATAAAGA+CGG | - | chr3_2:66474783-66474802 | None:intergenic | 45.0% | |
| TTGCCTACGTACCCGTTTAA+GGG | + | chr3_2:66474926-66474945 | Msa0418660:intron | 45.0% | |
| AATGAGAGAAAGAGGCCTCA+AGG | + | chr3_2:66475033-66475052 | Msa0418660:intron | 45.0% | |
| ATGAGAGAAAGAGGCCTCAA+GGG | + | chr3_2:66475034-66475053 | Msa0418660:intron | 45.0% | |
| AAAGTGGTGTGTGCATGTGT+CGG | + | chr3_2:66475319-66475338 | Msa0418660:intron | 45.0% | |
| AGTTAAGCCTTGCCTTGATG+AGG | - | chr3_2:66475696-66475715 | None:intergenic | 45.0% | |
| TGCTTTGCAAGTAATGGTGG+TGG | - | chr3_2:66475850-66475869 | None:intergenic | 45.0% | |
| GCTTGCTTTGCAAGTAATGG+TGG | - | chr3_2:66475853-66475872 | None:intergenic | 45.0% | |
| CCCAAATCCAAAGTCTGAGT+TGG | + | chr3_2:66476221-66476240 | Msa0418660:intron | 45.0% | |
| ! | TCCAAAGTCTGAGTTGGATC+TGG | + | chr3_2:66476227-66476246 | Msa0418660:intron | 45.0% |
| TCCAGATCCAACTCAGACTT+TGG | - | chr3_2:66476231-66476250 | None:intergenic | 45.0% | |
| GTAGGACTGGATCAATCTGA+CGG | - | chr3_2:66476273-66476292 | None:intergenic | 45.0% | |
| TCTATGACTCCCTCTTTCCA+TGG | + | chr3_2:66476574-66476593 | Msa0418660:intron | 45.0% | |
| TCGTCTTCTCCATGGAAAGA+GGG | - | chr3_2:66476586-66476605 | None:intergenic | 45.0% | |
| TTCGTCTTCTCCATGGAAAG+AGG | - | chr3_2:66476587-66476606 | None:intergenic | 45.0% | |
| GACAACAAAAGGAACGGTAC+TGG | - | chr3_2:66476836-66476855 | None:intergenic | 45.0% | |
| ! | GTGATGTTGAGCTTTGTGGA+TGG | + | chr3_2:66476921-66476940 | Msa0418660:intron | 45.0% |
| ! | TGGTGATGAATCCGAACTGA+TGG | + | chr3_2:66477007-66477026 | Msa0418660:intron | 45.0% |
| ! | TGAATCCGAACTGATGGTGA+TGG | + | chr3_2:66477013-66477032 | Msa0418660:intron | 45.0% |
| !! | CTGATGGTGATGGATTTGTG+AGG | + | chr3_2:66477023-66477042 | Msa0418660:intron | 45.0% |
| !! | GGTGATGGATTTGTGAGGAA+CGG | + | chr3_2:66477028-66477047 | Msa0418660:intron | 45.0% |
| ! | GTGAGGAACGGTGTTAGAAT+TGG | + | chr3_2:66477040-66477059 | Msa0418660:intron | 45.0% |
| TGACTCAAAGGCCAACTCAA+CGG | - | chr3_2:66477216-66477235 | None:intergenic | 45.0% | |
| TAGCTGATGACTGTAATGCC+TGG | + | chr3_2:66477243-66477262 | Msa0418660:intron | 45.0% | |
| !! | TGGCAGTTTGTTATTGGTCC+AGG | - | chr3_2:66477264-66477283 | None:intergenic | 45.0% |
| !! | GCCACATGGCAGTTTGTTAT+TGG | - | chr3_2:66477270-66477289 | None:intergenic | 45.0% |
| AAAAGACTGACATGTGGCAC+TGG | + | chr3_2:66477311-66477330 | Msa0418660:intron | 45.0% | |
| ACGAACCAATGGCCTAAATG+AGG | + | chr3_2:66477471-66477490 | Msa0418660:intron | 45.0% | |
| GAAATGACCAAAATGCCCCT+AGG | + | chr3_2:66477531-66477550 | Msa0418660:intron | 45.0% | |
| !!! | TTTTAGCCCTAGGGGCATTT+TGG | - | chr3_2:66477541-66477560 | None:intergenic | 45.0% |
| !! | TTCAGTCGTTTTAGCCCTAG+GGG | - | chr3_2:66477549-66477568 | None:intergenic | 45.0% |
| ! | CCTCCAAGATTTAAGGTGAC+AGG | - | chr3_2:66478634-66478653 | None:intergenic | 45.0% |
| CCTGTCACCTTAAATCTTGG+AGG | + | chr3_2:66478631-66478650 | Msa0418660:intron | 45.0% | |
| GGCGCATATTACCTTGGTTA+TGG | - | chr3_2:66478667-66478686 | None:intergenic | 45.0% | |
| GCTTGCATGCCATTCAAGAA+TGG | - | chr3_2:66478783-66478802 | None:intergenic | 45.0% | |
| CAACTCATGGGGACTCATAA+AGG | - | chr3_2:66479033-66479052 | None:intergenic | 45.0% | |
| CTTTATGAGTCCCCATGAGT+TGG | + | chr3_2:66479031-66479050 | Msa0418660:intron | 45.0% | |
| CTCCTTTGTCTCCAATCATC+AGG | - | chr3_2:66479066-66479085 | None:intergenic | 45.0% | |
| GATGATTGGAGACAAAGGAG+TGG | + | chr3_2:66479066-66479085 | Msa0418660:intron | 45.0% | |
| GGTTGTGTCCTCTTCTCTAT+AGG | - | chr3_2:66479140-66479159 | None:intergenic | 45.0% | |
| GCAGGTGGTAGGTACATTAA+AGG | - | chr3_2:66479185-66479204 | None:intergenic | 45.0% | |
| TACTCCATGCTCTATGATGC+AGG | - | chr3_2:66479203-66479222 | None:intergenic | 45.0% | |
| GATGACAAGAGTTTGAGCAG+AGG | + | chr3_2:66479355-66479374 | Msa0418660:CDS | 45.0% | |
| ACAAGAGTTTGAGCAGAGGA+TGG | + | chr3_2:66479359-66479378 | Msa0418660:CDS | 45.0% | |
| GATGGAGATGGCAAGTAGAA+TGG | + | chr3_2:66479377-66479396 | Msa0418660:CDS | 45.0% | |
| TGGAGATGGCAAGTAGAATG+GGG | + | chr3_2:66479379-66479398 | Msa0418660:CDS | 45.0% | |
| GCTCTAATACACCACTTGCA+AGG | - | chr3_2:66479617-66479636 | None:intergenic | 45.0% | |
| TGTGGCATCTTGTGTCAGTA+TGG | + | chr3_2:66479665-66479684 | Msa0418660:intron | 45.0% | |
| !! | AAGGTGGTAGTAGCATTGGT+TGG | + | chr3_2:66479703-66479722 | Msa0418660:intron | 45.0% |
| GTTGGAACCGTGGTAAAGAA+TGG | + | chr3_2:66479721-66479740 | Msa0418660:intron | 45.0% | |
| TACCACCATGTAGAGTAGCA+TGG | + | chr3_2:66479967-66479986 | Msa0418660:intron | 45.0% | |
| ACCACCATGTAGAGTAGCAT+GGG | + | chr3_2:66479968-66479987 | Msa0418660:intron | 45.0% | |
| ATGTAGAGTAGCATGGGTGT+GGG | + | chr3_2:66479974-66479993 | Msa0418660:intron | 45.0% | |
| TTGTTGTCCAAGATGCTGGT+AGG | + | chr3_2:66480398-66480417 | Msa0418660:CDS | 45.0% | |
| TATCAAGCCTACCAGCATCT+TGG | - | chr3_2:66480408-66480427 | None:intergenic | 45.0% | |
| GCTGGTAGGCTTGATACTAT+AGG | + | chr3_2:66480412-66480431 | Msa0418660:CDS | 45.0% | |
| GGTGATAAGACTGAATGGGA+AGG | - | chr3_2:66480753-66480772 | None:intergenic | 45.0% | |
| ! | CTGGTGGTGATAAGACTGAA+TGG | - | chr3_2:66480758-66480777 | None:intergenic | 45.0% |
| CTCACCTCAATCAATTCTGG+TGG | - | chr3_2:66480774-66480793 | None:intergenic | 45.0% | |
| GTGAGAACCATTGATCATGC+TGG | + | chr3_2:66480789-66480808 | Msa0418660:intron | 45.0% | |
| ! | TTTTTGTGTGCCTGTGCTGT+TGG | + | chr3_2:66481224-66481243 | Msa0418660:intron | 45.0% |
| !! | ATGGATTGGAGACCAAGAAG+AGG | + | chr3_2:66481288-66481307 | Msa0418660:intron | 45.0% |
| TTGGAGACCAAGAAGAGGTA+TGG | + | chr3_2:66481293-66481312 | Msa0418660:intron | 45.0% | |
| ! | TGATGATGCAGGTTGTCCAT+TGG | - | chr3_2:66481440-66481459 | None:intergenic | 45.0% |
| !! | AAAATAAAATGAATTAAAAT+TGG | + | chr3_2:66477395-66477414 | Msa0418660:intron | 5.0% |
| !!! | TTTAATATTTTTAAGTAAAT+TGG | - | chr3_2:66480067-66480086 | None:intergenic | 5.0% |
| GTAGTAAGCGGTGGTCATCT+GGG | - | chr3_2:66473557-66473576 | None:intergenic | 50.0% | |
| !! | GACATTCTGTTGGGTTGAGG+AGG | - | chr3_2:66473654-66473673 | None:intergenic | 50.0% |
| GTGGCGGTTTGACATTCTGT+TGG | - | chr3_2:66473664-66473683 | None:intergenic | 50.0% | |
| !! | GGTATTTCGGAGAAGGTGCT+GGG | - | chr3_2:66473797-66473816 | None:intergenic | 50.0% |
| ! | TGGTATTTCGGAGAAGGTGC+TGG | - | chr3_2:66473798-66473817 | None:intergenic | 50.0% |
| AATAGACGGGGGAGCTATAG+TGG | - | chr3_2:66473818-66473837 | None:intergenic | 50.0% | |
| ! | TAGCTCCCCCGTCTATTTTC+CGG | + | chr3_2:66473821-66473840 | Msa0418660:CDS | 50.0% |
| ACCTACCGGAAAATAGACGG+GGG | - | chr3_2:66473829-66473848 | None:intergenic | 50.0% | |
| CACCTACCGGAAAATAGACG+GGG | - | chr3_2:66473830-66473849 | None:intergenic | 50.0% | |
| GCACCTACCGGAAAATAGAC+GGG | - | chr3_2:66473831-66473850 | None:intergenic | 50.0% | |
| AACCCTTGAGAATCGAGGTC+CGG | + | chr3_2:66474696-66474715 | Msa0418660:intron | 50.0% | |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | + | chr3_2:66474714-66474733 | Msa0418660:intron | 50.0% |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | + | chr3_2:66474719-66474738 | Msa0418660:intron | 50.0% |
| !! | TTTCGCTACGGGAAGGTGTT+AGG | + | chr3_2:66474726-66474745 | Msa0418660:intron | 50.0% |
| CTTAAACGGGTACGTAGGCA+AGG | - | chr3_2:66474927-66474946 | None:intergenic | 50.0% | |
| CTTGCCTACGTACCCGTTTA+AGG | + | chr3_2:66474925-66474944 | Msa0418660:intron | 50.0% | |
| GATCCCTTAAACGGGTACGT+AGG | - | chr3_2:66474932-66474951 | None:intergenic | 50.0% | |
| AGCCACAGGATCTGCAAGAA+AGG | + | chr3_2:66476197-66476216 | Msa0418660:intron | 50.0% | |
| GCCACAGGATCTGCAAGAAA+GGG | + | chr3_2:66476198-66476217 | Msa0418660:intron | 50.0% | |
| ! | TCTGACGGCTGCAAAGCATT+TGG | - | chr3_2:66476258-66476277 | None:intergenic | 50.0% |
| AACCTTAGATCCAAGGGCCA+AGG | + | chr3_2:66476296-66476315 | Msa0418660:intron | 50.0% | |
| ACCTTAGATCCAAGGGCCAA+GGG | + | chr3_2:66476297-66476316 | Msa0418660:intron | 50.0% | |
| AAGCAGGTCGGAGAAGAAGA+AGG | - | chr3_2:66476465-66476484 | None:intergenic | 50.0% | |
| !!! | GAGTTTTGATTCTCCGGCGA+CGG | - | chr3_2:66476531-66476550 | None:intergenic | 50.0% |
| ! | AGACGGATTCGTCTTCTCCA+TGG | - | chr3_2:66476594-66476613 | None:intergenic | 50.0% |
| TGAACTCGCCGTTGTGTGTT+CGG | + | chr3_2:66476727-66476746 | Msa0418660:intron | 50.0% | |
| AACGAGGACCGAACACACAA+CGG | - | chr3_2:66476738-66476757 | None:intergenic | 50.0% | |
| AGCAAACGGAGCAAGAAACG+AGG | - | chr3_2:66476754-66476773 | None:intergenic | 50.0% | |
| TGAATGGACCTCCGTTGAGT+TGG | + | chr3_2:66477202-66477221 | Msa0418660:intron | 50.0% | |
| ! | TGTGGCACTGGACTATGACT+TGG | + | chr3_2:66477323-66477342 | Msa0418660:intron | 50.0% |
| CACGAAATTTCGGCAGAGAG+AGG | - | chr3_2:66477510-66477529 | None:intergenic | 50.0% | |
| AAGGACGGCGCATATTACCT+TGG | - | chr3_2:66478673-66478692 | None:intergenic | 50.0% | |
| TGCTCTATGATGCAGGTGGT+AGG | - | chr3_2:66479196-66479215 | None:intergenic | 50.0% | |
| ACCACCTGCATCATAGAGCA+TGG | + | chr3_2:66479196-66479215 | Msa0418660:intron | 50.0% | |
| TCCATGCTCTATGATGCAGG+TGG | - | chr3_2:66479200-66479219 | None:intergenic | 50.0% | |
| GTTTGAGCAGAGGATGGAGA+TGG | + | chr3_2:66479365-66479384 | Msa0418660:CDS | 50.0% | |
| TAGAGCACAAACATCGGTGG+TGG | + | chr3_2:66479631-66479650 | Msa0418660:intron | 50.0% | |
| !! | AGTAGCATTGGTTGGAACCG+TGG | + | chr3_2:66479711-66479730 | Msa0418660:intron | 50.0% |
| ACCCATGCTACTCTACATGG+TGG | - | chr3_2:66479972-66479991 | None:intergenic | 50.0% | |
| CACACCCATGCTACTCTACA+TGG | - | chr3_2:66479975-66479994 | None:intergenic | 50.0% | |
| CATGTAGAGTAGCATGGGTG+TGG | + | chr3_2:66479973-66479992 | Msa0418660:intron | 50.0% | |
| CAGGAAATGGAACGACTGAC+TGG | + | chr3_2:66480362-66480381 | Msa0418660:CDS | 50.0% | |
| ! | GGGGATGAGTTGCCTACTTT+TGG | + | chr3_2:66480712-66480731 | Msa0418660:intron | 50.0% |
| GTTGCTGGTGTGGTTACTTC+AGG | + | chr3_2:66481024-66481043 | Msa0418660:intron | 50.0% | |
| GGTAGTAAGCGGTGGTCATC+TGG | - | chr3_2:66473558-66473577 | None:intergenic | 55.0% | |
| CCTGCATGTGCGGTAGTAAG+CGG | - | chr3_2:66473569-66473588 | None:intergenic | 55.0% | |
| TGTGGTTGCACGGTCATTGG+TGG | - | chr3_2:66473603-66473622 | None:intergenic | 55.0% | |
| GGTTGTGGTTGCACGGTCAT+TGG | - | chr3_2:66473606-66473625 | None:intergenic | 55.0% | |
| ! | TCCCCCGTCTATTTTCCGGT+AGG | + | chr3_2:66473825-66473844 | Msa0418660:intron | 55.0% |
| ACCCTTGAGAATCGAGGTCC+GGG | + | chr3_2:66474697-66474716 | Msa0418660:intron | 55.0% | |
| TCCCGGACCTCGATTCTCAA+GGG | - | chr3_2:66474701-66474720 | None:intergenic | 55.0% | |
| CCCGTAGCGAAAACAACTCC+CGG | - | chr3_2:66474718-66474737 | None:intergenic | 55.0% | |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | + | chr3_2:66474715-66474734 | Msa0418660:intron | 55.0% |
| ! | GCATGTGTCGGTGCTTGTGT+CGG | + | chr3_2:66475331-66475350 | Msa0418660:intron | 55.0% |
| GCCCTTTCTTGCAGATCCTG+TGG | - | chr3_2:66476202-66476221 | None:intergenic | 55.0% | |
| ! | GGCGCGTGTGTGTTTTGTGA+GGG | - | chr3_2:66476402-66476421 | None:intergenic | 55.0% |
| ! | AGGCGCGTGTGTGTTTTGTG+AGG | - | chr3_2:66476403-66476422 | None:intergenic | 55.0% |
| CTTCTTCTCCGACCTGCTTC+CGG | + | chr3_2:66476466-66476485 | Msa0418660:intron | 55.0% | |
| TTTCCACCGGAGAAGACGAC+CGG | - | chr3_2:66476488-66476507 | None:intergenic | 55.0% | |
| GTCGTCTTCTCCGGTGGAAA+GGG | + | chr3_2:66476488-66476507 | Msa0418660:intron | 55.0% | |
| TGATTCTCCGGCGACGGAAA+CGG | - | chr3_2:66476525-66476544 | None:intergenic | 55.0% | |
| CACACAACGGCGAGTTCAAC+AGG | - | chr3_2:66476725-66476744 | None:intergenic | 55.0% | |
| CTCAAAGGCCAACTCAACGG+AGG | - | chr3_2:66477213-66477232 | None:intergenic | 55.0% | |
| GTGGTGGCATTGCTTACGTG+TGG | + | chr3_2:66479647-66479666 | Msa0418660:intron | 55.0% | |
| AGCATCCACACCAACAGCAC+AGG | - | chr3_2:66481237-66481256 | None:intergenic | 55.0% | |
| GCATGTGCGGTAGTAAGCGG+TGG | - | chr3_2:66473566-66473585 | None:intergenic | 60.0% | |
| CCGCTTACTACCGCACATGC+AGG | + | chr3_2:66473566-66473585 | Msa0418660:five_prime_UTR | 60.0% | |
| CAGACAGTGGCCTGCATGTG+CGG | - | chr3_2:66473579-66473598 | None:intergenic | 60.0% | |
| ! | GGTCATTGGTGGCCAGACAG+TGG | - | chr3_2:66473592-66473611 | None:intergenic | 60.0% |
| CAAACCGCCACCACTCTCGT+CGG | + | chr3_2:66473673-66473692 | Msa0418660:CDS | 60.0% | |
| CGGAGCAACGCTGCCTTCAT+TGG | + | chr3_2:66473693-66473712 | Msa0418660:CDS | 60.0% | |
| CTCCCGGACCTCGATTCTCA+AGG | - | chr3_2:66474702-66474721 | None:intergenic | 60.0% | |
| GCCCTTGGCCCTTGGATCTA+AGG | - | chr3_2:66476301-66476320 | None:intergenic | 60.0% | |
| ACCATGTTCTCCTGCGCCCT+TGG | - | chr3_2:66476316-66476335 | None:intergenic | 60.0% | |
| GAAGACGACCGGAAGCAGGT+CGG | - | chr3_2:66476477-66476496 | None:intergenic | 60.0% | |
| CTGCTTCCGGTCGTCTTCTC+CGG | + | chr3_2:66476479-66476498 | Msa0418660:intron | 60.0% | |
| GGTCGTCTTCTCCGGTGGAA+AGG | + | chr3_2:66476487-66476506 | Msa0418660:intron | 60.0% | |
| ! | GTGTGCCTGTGCTGTTGGTG+TGG | + | chr3_2:66481229-66481248 | Msa0418660:intron | 60.0% |
| CGCACATGCAGGCCACTGTC+TGG | + | chr3_2:66473577-66473596 | Msa0418660:five_prime_UTR | 65.0% | |
| TGCTCCGACGAGAGTGGTGG+CGG | - | chr3_2:66473680-66473699 | None:intergenic | 65.0% | |
| CGTTGCTCCGACGAGAGTGG+TGG | - | chr3_2:66473683-66473702 | None:intergenic | 65.0% | |
| CAGCGTTGCTCCGACGAGAG+TGG | - | chr3_2:66473686-66473705 | None:intergenic | 65.0% | |
| ! | GCCAAGGGCGCAGGAGAACA+TGG | + | chr3_2:66476312-66476331 | Msa0418660:intron | 65.0% |
| CGGAGAAGACGACCGGAAGC+AGG | - | chr3_2:66476481-66476500 | None:intergenic | 65.0% | |
| CTTCCGGTCGTCTTCTCCGG+TGG | + | chr3_2:66476482-66476501 | Msa0418660:intron | 65.0% | |
| CTCCGGTGGAAAGGGAGCTC+CGG | + | chr3_2:66476496-66476515 | Msa0418660:intron | 65.0% | |
| ! | GATCCAAGGGCCAAGGGCGC+AGG | + | chr3_2:66476303-66476322 | Msa0418660:intron | 70.0% |
| TCTCCTGCGCCCTTGGCCCT+TGG | - | chr3_2:66476309-66476328 | None:intergenic | 70.0% | |
| CGCCGGAGCTCCCTTTCCAC+CGG | - | chr3_2:66476501-66476520 | None:intergenic | 70.0% | |
| CGGTGGAAAGGGAGCTCCGG+CGG | + | chr3_2:66476499-66476518 | Msa0418660:intron | 70.0% | |
| ! | CGCAGTGCACGCGCGCGCGT+AGG | + | chr3_2:66476338-66476357 | Msa0418660:intron | 80.0% |
| ! | CCGGCGACGGAAACGGCCGC+CGG | - | chr3_2:66476518-66476537 | None:intergenic | 80.0% |
| ! | CCGGCGGCCGTTTCCGTCGC+CGG | + | chr3_2:66476515-66476534 | Msa0418660:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 66473512 | 66481544 | 66473512 | ID=Msa0418660;Name=Msa0418660 |
| chr3_2 | mRNA | 66473512 | 66481544 | 66473512 | ID=Msa0418660-mRNA-1;Parent=Msa0418660;Name=Msa0418660-mRNA-1;_AED=0.29;_eAED=0.45;_QI=157|0|0.5|1|0.33|0.5|4|0|159 |
| chr3_2 | exon | 66473512 | 66473842 | 66473512 | ID=Msa0418660-mRNA-1:exon:15183;Parent=Msa0418660-mRNA-1 |
| chr3_2 | exon | 66479349 | 66479419 | 66479349 | ID=Msa0418660-mRNA-1:exon:15184;Parent=Msa0418660-mRNA-1 |
| chr3_2 | exon | 66480345 | 66480433 | 66480345 | ID=Msa0418660-mRNA-1:exon:15185;Parent=Msa0418660-mRNA-1 |
| chr3_2 | exon | 66481399 | 66481544 | 66481399 | ID=Msa0418660-mRNA-1:exon:15186;Parent=Msa0418660-mRNA-1 |
| chr3_2 | five_prime_UTR | 66473512 | 66473668 | 66473512 | ID=Msa0418660-mRNA-1:five_prime_utr;Parent=Msa0418660-mRNA-1 |
| chr3_2 | CDS | 66473669 | 66473842 | 66473669 | ID=Msa0418660-mRNA-1:cds;Parent=Msa0418660-mRNA-1 |
| chr3_2 | CDS | 66479349 | 66479419 | 66479349 | ID=Msa0418660-mRNA-1:cds;Parent=Msa0418660-mRNA-1 |
| chr3_2 | CDS | 66480345 | 66480433 | 66480345 | ID=Msa0418660-mRNA-1:cds;Parent=Msa0418660-mRNA-1 |
| chr3_2 | CDS | 66481399 | 66481544 | 66481399 | ID=Msa0418660-mRNA-1:cds;Parent=Msa0418660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
