Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419810 | XP_013461078.1 | 96.893 | 354 | 11 | 0 | 7 | 360 | 1 | 354 | 0.0 | 716 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419810 | sp|Q6PAF4|NSE1_XENLA | 26.712 | 292 | 178 | 11 | 7 | 292 | 1 | 262 | 1.39e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419810 | A0A072UZW9 | 96.893 | 354 | 11 | 0 | 7 | 360 | 1 | 354 | 0.0 | 716 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0419810 | Msa1429260 | 0.888689 | 4.722633e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419810 | MtrunA17_Chr3g0118411 | 96.893 | 354 | 11 | 0 | 7 | 360 | 1 | 354 | 0.0 | 716 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419810 | AT5G21140.1 | 55.319 | 282 | 120 | 3 | 9 | 289 | 2 | 278 | 2.27e-105 | 312 |
Find 103 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGCTCTCAATCTTAATT+TGG | 0.148843 | 3_2:-67996326 | Msa0419810:CDS |
| CCACATGCATTGAAGAATTT+TGG | 0.174792 | 3_2:-67995419 | Msa0419810:CDS |
| TATGATGGCCAAGTTTATTA+TGG | 0.208577 | 3_2:-67997163 | Msa0419810:CDS |
| GCTATTTGATGCGTTTATTC+TGG | 0.257984 | 3_2:-67997242 | Msa0419810:CDS |
| GTCTCTACGGCTTCTGCTTT+GGG | 0.261719 | 3_2:+67994553 | None:intergenic |
| TCCACAAATTGCTTTCTATA+AGG | 0.279022 | 3_2:-67997086 | Msa0419810:CDS |
| AGTCTCTACGGCTTCTGCTT+TGG | 0.294534 | 3_2:+67994552 | None:intergenic |
| GCCCAAGTTGTGGCACTTCA+TGG | 0.335504 | 3_2:-67994588 | Msa0419810:CDS |
| TAGGGCGCTGTTGTAAGTTT+AGG | 0.370019 | 3_2:+67994255 | None:intergenic |
| TTGCAATGAAGCTGGAATAA+AGG | 0.376225 | 3_2:-67995249 | Msa0419810:intron |
| GCCTTGATATTGTTTATTAG+TGG | 0.384453 | 3_2:-67993961 | None:intergenic |
| CTGATATTTAGATTACTAGA+AGG | 0.394230 | 3_2:+67994063 | None:intergenic |
| TCTGCTTTGGGTACTGCAAA+TGG | 0.398255 | 3_2:+67994565 | None:intergenic |
| CGCAGTTGGATGCAGCAATC+AGG | 0.407043 | 3_2:-67994443 | Msa0419810:CDS |
| TCTGCGAGAAAATTTGCTTC+AGG | 0.409397 | 3_2:+67994714 | None:intergenic |
| CAATCTTAATTTGGAAAGCC+AGG | 0.440880 | 3_2:-67996317 | Msa0419810:intron |
| AGCTTCATTGCAAACGTGAC+AGG | 0.446876 | 3_2:+67995259 | None:intergenic |
| GCTTTACTAGTGATGCAGTT+AGG | 0.451370 | 3_2:-67994158 | Msa0419810:three_prime_UTR |
| GGCCATGAAGTGCCACAACT+TGG | 0.452622 | 3_2:+67994586 | None:intergenic |
| AGGCAAAGCCAACGAGCAAC+TGG | 0.465810 | 3_2:-67994511 | Msa0419810:CDS |
| CTTGTCACGGGGCCCGCTCA+AGG | 0.475358 | 3_2:-67997658 | Msa0419810:CDS |
| TGTAAGACTTTCTCCTTGAG+CGG | 0.477735 | 3_2:+67997645 | None:intergenic |
| GTCATCCTCAACAATTGTAT+TGG | 0.481631 | 3_2:+67994465 | None:intergenic |
| GAAACCAACTGCGGAGATCA+AGG | 0.482952 | 3_2:+67995300 | None:intergenic |
| GTTGCTCGTTGGCTTTGCCT+AGG | 0.484763 | 3_2:+67994514 | None:intergenic |
| GTGCCCGTCCATTGTCATGC+TGG | 0.489028 | 3_2:+67994395 | None:intergenic |
| GATGATGATTGAGATGCATC+AGG | 0.495582 | 3_2:+67994325 | None:intergenic |
| CATCAATGCCCCTACCTCAA+TGG | 0.498231 | 3_2:+67994020 | None:intergenic |
| CGTGTCAATGCCATTGAGGT+AGG | 0.498449 | 3_2:-67994030 | Msa0419810:three_prime_UTR |
| ACTCAAAGTTAGCACAAGAA+AGG | 0.498529 | 3_2:+67997206 | None:intergenic |
| TAAACTTACAACAGCGCCCT+AGG | 0.499339 | 3_2:-67994253 | Msa0419810:three_prime_UTR |
| TGTATACTTTGTGCCCAGCT+TGG | 0.504273 | 3_2:+67997111 | None:intergenic |
| GATGCATCTCAATCATCATC+AGG | 0.506630 | 3_2:-67994322 | Msa0419810:CDS |
| AATTCAATCTCTCTTGTCAC+GGG | 0.507948 | 3_2:-67997670 | Msa0419810:CDS |
| TTCAGATGAACAATCCAAGC+TGG | 0.508896 | 3_2:-67997125 | Msa0419810:CDS |
| GCCTTATAGAAAGCAATTTG+TGG | 0.513410 | 3_2:+67997085 | None:intergenic |
| GCTATTGAAAGAAGTATGTC+GGG | 0.513625 | 3_2:-67997720 | Msa0419810:CDS |
| ACCACTAATAAACAATATCA+AGG | 0.520901 | 3_2:+67993960 | None:intergenic |
| CAACGAGCAACTGGTTCTAA+AGG | 0.525919 | 3_2:-67994502 | Msa0419810:CDS |
| CAACTGGTTCTAAAGGTAAG+AGG | 0.525979 | 3_2:-67994495 | Msa0419810:CDS |
| CATTCCTTGATCTCCGCAGT+TGG | 0.526558 | 3_2:-67995304 | Msa0419810:CDS |
| GTAAGACTTTCTCCTTGAGC+GGG | 0.528046 | 3_2:+67997646 | None:intergenic |
| AGCTATTGAAAGAAGTATGT+CGG | 0.530319 | 3_2:-67997721 | Msa0419810:CDS |
| TAACTAATCCATAATAAACT+TGG | 0.532488 | 3_2:+67997155 | None:intergenic |
| GTGTCAATGCCATTGAGGTA+GGG | 0.532564 | 3_2:-67994029 | Msa0419810:three_prime_UTR |
| CTCAAAGTTAGCACAAGAAA+GGG | 0.532992 | 3_2:+67997207 | None:intergenic |
| ATGCATGTGGCACATGTGGT+TGG | 0.535579 | 3_2:+67995432 | None:intergenic |
| AGTCTTACACTCCATGTTCG+AGG | 0.535686 | 3_2:-67997631 | Msa0419810:CDS |
| GCCATGAAGTGCCACAACTT+GGG | 0.545475 | 3_2:+67994587 | None:intergenic |
| GTTTATTCTGGCAATGAACA+AGG | 0.546129 | 3_2:-67997230 | Msa0419810:CDS |
| GTTCAAGATGCCACTGCAGA+TGG | 0.549157 | 3_2:-67996364 | Msa0419810:CDS |
| TTGTCATGCTGGCTCTCAGT+AGG | 0.549886 | 3_2:+67994406 | None:intergenic |
| GAGAACTTGCGAGGGACTTG+TGG | 0.550568 | 3_2:-67995370 | Msa0419810:CDS |
| CTTTAGAACCAGTTGCTCGT+TGG | 0.551727 | 3_2:+67994503 | None:intergenic |
| CTTAGTGAGATCCTCGAACA+TGG | 0.551810 | 3_2:+67997620 | None:intergenic |
| ACTTGCGAGGGACTTGTGGT+TGG | 0.551986 | 3_2:-67995366 | Msa0419810:CDS |
| TGTCAATGCCATTGAGGTAG+GGG | 0.552304 | 3_2:-67994028 | Msa0419810:three_prime_UTR |
| TGTCACGTTTGCAATGAAGC+TGG | 0.552411 | 3_2:-67995257 | Msa0419810:CDS |
| TAATTCAATCTCTCTTGTCA+CGG | 0.552688 | 3_2:-67997671 | Msa0419810:CDS |
| AAGATTGAGAGCATCAATGC+TGG | 0.554345 | 3_2:+67996333 | None:intergenic |
| AGTGTCATCTTCAGTCTCTA+CGG | 0.555465 | 3_2:+67994540 | None:intergenic |
| ACAATGGACGGGCACGAACA+AGG | 0.562042 | 3_2:-67994387 | Msa0419810:CDS |
| AGTCTAACATTACCATCTGC+AGG | 0.566946 | 3_2:+67995338 | None:intergenic |
| TGTTGTAAGTTTAGGTCCGA+CGG | 0.569183 | 3_2:+67994263 | None:intergenic |
| GCAAAAGCTTGCCCAAGTTG+TGG | 0.572714 | 3_2:-67994598 | Msa0419810:CDS |
| AATTTAGCAATATCTTGTTG+TGG | 0.575754 | 3_2:-67994114 | Msa0419810:three_prime_UTR |
| CTAGTATAGGCACTGATCGT+CGG | 0.580994 | 3_2:-67997264 | Msa0419810:intron |
| CCAAAATTCTTCAATGCATG+TGG | 0.581660 | 3_2:+67995419 | None:intergenic |
| AGAGCCAGCATGACAATGGA+CGG | 0.582782 | 3_2:-67994399 | Msa0419810:CDS |
| TTCAATGCATGTGGCACATG+TGG | 0.583553 | 3_2:+67995428 | None:intergenic |
| GTTGTAAGTTTAGGTCCGAC+GGG | 0.584461 | 3_2:+67994264 | None:intergenic |
| TGTTGTGGTTGACTGACCTG+TGG | 0.584548 | 3_2:-67994099 | Msa0419810:three_prime_UTR |
| CTGAAGATGACACTGGACCT+AGG | 0.589195 | 3_2:-67994531 | Msa0419810:CDS |
| GGCTGCATTGATCAATATGA+TGG | 0.589372 | 3_2:-67997178 | Msa0419810:CDS |
| AGGTTTGTGATTCAAGCCAC+AGG | 0.591363 | 3_2:+67994083 | None:intergenic |
| ACAGCGCCCTAGGGAATGCT+AGG | 0.593001 | 3_2:-67994243 | Msa0419810:three_prime_UTR |
| ATTGTTGAGGATGACGCAGT+TGG | 0.596930 | 3_2:-67994457 | Msa0419810:CDS |
| ATACTCTAAGAGAACTTGCG+AGG | 0.601702 | 3_2:-67995379 | Msa0419810:CDS |
| TGCATCGCCTAGCATTCCCT+AGG | 0.602830 | 3_2:+67994236 | None:intergenic |
| GTGACTGATTCAGAATCTCA+AGG | 0.606009 | 3_2:-67995458 | Msa0419810:CDS |
| ACTGAGAGCCAGCATGACAA+TGG | 0.606660 | 3_2:-67994403 | Msa0419810:CDS |
| TCAGATGAACAATCCAAGCT+GGG | 0.608821 | 3_2:-67997124 | Msa0419810:CDS |
| TGTGCTAACTTTGAGTTGCG+TGG | 0.609737 | 3_2:-67997199 | Msa0419810:CDS |
| GAGCCAGCATGACAATGGAC+GGG | 0.611437 | 3_2:-67994398 | Msa0419810:CDS |
| AAACTTACAACAGCGCCCTA+GGG | 0.612971 | 3_2:-67994252 | Msa0419810:three_prime_UTR |
| TACTCTAAGAGAACTTGCGA+GGG | 0.614485 | 3_2:-67995378 | Msa0419810:CDS |
| AAGAGCCAATACAATTGTTG+AGG | 0.617128 | 3_2:-67994470 | Msa0419810:CDS |
| TCATTGCAAACGTGACAGGA+TGG | 0.617289 | 3_2:+67995263 | None:intergenic |
| TTGAAAGAAGTATGTCGGGT+GGG | 0.618893 | 3_2:-67997716 | Msa0419810:CDS |
| GCATCGCCTAGCATTCCCTA+GGG | 0.628693 | 3_2:+67994237 | None:intergenic |
| GCAGATGGTAATGTTAGACT+TGG | 0.634514 | 3_2:-67995335 | Msa0419810:CDS |
| GACGGGCACGAACAAGGACT+AGG | 0.635871 | 3_2:-67994381 | Msa0419810:CDS |
| TGGTTGGACATGCCTGCAGA+TGG | 0.638572 | 3_2:-67995350 | Msa0419810:CDS |
| GGAGATAAAACCATCTGCAG+TGG | 0.645973 | 3_2:+67996354 | None:intergenic |
| ACACTTGAAGCAGATACAGT+AGG | 0.658801 | 3_2:-67994349 | Msa0419810:CDS |
| ATTGAAAGAAGTATGTCGGG+TGG | 0.662835 | 3_2:-67997717 | Msa0419810:CDS |
| GTAGAGACTGAAGATGACAC+TGG | 0.669190 | 3_2:-67994538 | Msa0419810:CDS |
| AATTCGTGTCAATGCCATTG+AGG | 0.669246 | 3_2:-67994034 | Msa0419810:three_prime_UTR |
| ATGATGATTGAGATGCATCA+GGG | 0.681950 | 3_2:+67994326 | None:intergenic |
| GATTGAATTATGACATGATG+TGG | 0.691274 | 3_2:+67997684 | None:intergenic |
| TAACCCGAAAATATTCCCGT+CGG | 0.700418 | 3_2:-67994279 | Msa0419810:CDS |
| ATTCAATCTCTCTTGTCACG+GGG | 0.705694 | 3_2:-67997669 | Msa0419810:CDS |
| CATTACTTCGAAACCAACTG+CGG | 0.732038 | 3_2:+67995291 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATTAAAATAAAAAGC+GGG | + | chr3_2:67995008-67995027 | None:intergenic | 10.0% |
| !! | ATATAAAATGGAAAATATAA+AGG | + | chr3_2:67995134-67995153 | None:intergenic | 10.0% |
| !! | CAATAATTATTAATTGAATT+AGG | - | chr3_2:67995934-67995953 | Msa0419810:intron | 10.0% |
| !!! | AATCTGTTATTTTTTATTAA+AGG | + | chr3_2:67996108-67996127 | None:intergenic | 10.0% |
| !!! | AACATTAAAGTTAATTTTAA+CGG | + | chr3_2:67996967-67996986 | None:intergenic | 10.0% |
| !! | TTTATGAAAAATATAATTCA+TGG | + | chr3_2:67997525-67997544 | None:intergenic | 10.0% |
| !!! | TTTATTTTTCCCAATTAATT+TGG | - | chr3_2:67994001-67994020 | Msa0419810:three_prime_UTR | 15.0% |
| !!! | TTTTTTTTCTGAGTTATTTT+CGG | - | chr3_2:67994056-67994075 | Msa0419810:three_prime_UTR | 15.0% |
| !! | ATAAATTAAAATAAAAAGCG+GGG | + | chr3_2:67995007-67995026 | None:intergenic | 15.0% |
| !!! | TAATATATGGTTGATTTATA+AGG | - | chr3_2:67995617-67995636 | Msa0419810:intron | 15.0% |
| !! | GAAATATTAAAATTTGACTA+TGG | - | chr3_2:67995639-67995658 | Msa0419810:intron | 15.0% |
| !!! | TATTATCTTGTTATTCAATA+TGG | + | chr3_2:67996861-67996880 | None:intergenic | 15.0% |
| !! | GAACAACATAAATAACAATA+TGG | + | chr3_2:67994255-67994274 | None:intergenic | 20.0% |
| !! | TGTATGTGTATAATGAAAAT+GGG | - | chr3_2:67994363-67994382 | Msa0419810:CDS | 20.0% |
| !! | TTTGTTAAATGAAGCAATTA+GGG | - | chr3_2:67994456-67994475 | Msa0419810:CDS | 20.0% |
| !!! | ATTTTTATTCCTGAAAAATC+TGG | - | chr3_2:67994713-67994732 | Msa0419810:CDS | 20.0% |
| !! | TAACTAATCCATAATAAACT+TGG | + | chr3_2:67995349-67995368 | None:intergenic | 20.0% |
| !! | AAATTTAATTACACTCACAA+TGG | + | chr3_2:67995441-67995460 | None:intergenic | 20.0% |
| !!! | GTTTGAAATGTCTTAATATA+TGG | - | chr3_2:67995604-67995623 | Msa0419810:intron | 20.0% |
| !! | TTGACTATGGAAAATTTAAA+TGG | - | chr3_2:67995652-67995671 | Msa0419810:intron | 20.0% |
| !!! | ATGGAAAATTTAAATGGTTT+TGG | - | chr3_2:67995658-67995677 | Msa0419810:intron | 20.0% |
| !! | CATAGAATTAAAAGAAGATT+AGG | - | chr3_2:67995797-67995816 | Msa0419810:intron | 20.0% |
| !! | TCTCATTTATTCTTACTAAT+AGG | - | chr3_2:67995878-67995897 | Msa0419810:intron | 20.0% |
| !! | CTCATTTATTCTTACTAATA+GGG | - | chr3_2:67995879-67995898 | Msa0419810:intron | 20.0% |
| !! | AAGTTTAATGAGATGAAAAT+TGG | + | chr3_2:67996478-67996497 | None:intergenic | 20.0% |
| !!! | AAAATTTCTAGATCCATTAT+TGG | + | chr3_2:67996601-67996620 | None:intergenic | 20.0% |
| !!! | AAATTTTATGATCTATGTTC+AGG | - | chr3_2:67997012-67997031 | Msa0419810:intron | 20.0% |
| !!! | ATAGCTTTCTTCTAATTTTA+CGG | - | chr3_2:67997546-67997565 | Msa0419810:intron | 20.0% |
| ! | AAAAATAAATATGCCTTTGG+CGG | + | chr3_2:67993990-67994009 | None:intergenic | 25.0% |
| !! | TCCTTTTCACCAAATTAATT+GGG | + | chr3_2:67994013-67994032 | None:intergenic | 25.0% |
| !! | ATCCTTTTCACCAAATTAAT+TGG | + | chr3_2:67994014-67994033 | None:intergenic | 25.0% |
| ! | TAACTCAGAAAAAAAAGAGA+GGG | + | chr3_2:67994052-67994071 | None:intergenic | 25.0% |
| ! | ATAACTCAGAAAAAAAAGAG+AGG | + | chr3_2:67994053-67994072 | None:intergenic | 25.0% |
| ! | GTGTATGTGTATAATGAAAA+TGG | - | chr3_2:67994362-67994381 | Msa0419810:CDS | 25.0% |
| ! | GTATGTGTATAATGAAAATG+GGG | - | chr3_2:67994364-67994383 | Msa0419810:CDS | 25.0% |
| ! | TATGTGTATAATGAAAATGG+GGG | - | chr3_2:67994365-67994384 | Msa0419810:CDS | 25.0% |
| ! | CATTTAACAAACCAAATTGT+TGG | + | chr3_2:67994447-67994466 | None:intergenic | 25.0% |
| !! | GTTTGTTAAATGAAGCAATT+AGG | - | chr3_2:67994455-67994474 | Msa0419810:CDS | 25.0% |
| ! | TTGTTAAATGAAGCAATTAG+GGG | - | chr3_2:67994457-67994476 | Msa0419810:CDS | 25.0% |
| ! | GTTTATAAGCATTTGATTGT+TGG | + | chr3_2:67994660-67994679 | None:intergenic | 25.0% |
| ! | TTTCAATAGCTATTCACTTA+CGG | + | chr3_2:67994771-67994790 | None:intergenic | 25.0% |
| !! | ACAGTTTGTAAACATTTTCA+GGG | + | chr3_2:67994934-67994953 | None:intergenic | 25.0% |
| ! | AACTAAAACTGAACAAAGAA+AGG | + | chr3_2:67994976-67994995 | None:intergenic | 25.0% |
| ! | GATAAAAGAAAAAGCTAACA+AGG | + | chr3_2:67995192-67995211 | None:intergenic | 25.0% |
| ! | TATCATGTTCTTGATTGAAT+TGG | - | chr3_2:67995208-67995227 | Msa0419810:intron | 25.0% |
| !!! | ATGGTTTTGGTCAATAATTA+AGG | - | chr3_2:67995671-67995690 | Msa0419810:intron | 25.0% |
| ! | GGTGTTTAAAAATGAAGTTT+AGG | - | chr3_2:67995697-67995716 | Msa0419810:intron | 25.0% |
| ! | ATTCTATGATCTTGTACATA+TGG | + | chr3_2:67995785-67995804 | None:intergenic | 25.0% |
| ! | AAGTATGATCAAACATATCA+AGG | - | chr3_2:67996287-67996306 | Msa0419810:intron | 25.0% |
| ! | TTTACAGTCTTACTTAATGA+AGG | - | chr3_2:67996520-67996539 | Msa0419810:intron | 25.0% |
| ! | GTAAATTCTCAATATGATCT+GGG | + | chr3_2:67996569-67996588 | None:intergenic | 25.0% |
| ! | AGTAAATTCTCAATATGATC+TGG | + | chr3_2:67996570-67996589 | None:intergenic | 25.0% |
| !! | TCTAGAAATTTTCTACAATG+AGG | - | chr3_2:67996609-67996628 | Msa0419810:intron | 25.0% |
| !! | CTAGAAATTTTCTACAATGA+GGG | - | chr3_2:67996610-67996629 | Msa0419810:intron | 25.0% |
| !!! | ACAATTATTTTCTTTGAGAC+AGG | + | chr3_2:67996798-67996817 | None:intergenic | 25.0% |
| ! | AAACATCTTTAACATGTTCA+AGG | - | chr3_2:67997471-67997490 | Msa0419810:intron | 25.0% |
| ! | AACATCTTTAACATGTTCAA+GGG | - | chr3_2:67997472-67997491 | Msa0419810:intron | 25.0% |
| !! | AATTTTACGGAGTAATCTTT+AGG | - | chr3_2:67997559-67997578 | Msa0419810:intron | 25.0% |
| !! | ATTTTACGGAGTAATCTTTA+GGG | - | chr3_2:67997560-67997579 | Msa0419810:intron | 25.0% |
| !!! | CATTTCTAAGATGGTAAAAA+TGG | + | chr3_2:67997833-67997852 | None:intergenic | 25.0% |
| ! | AATTTAGCAATATCTTGTTG+TGG | - | chr3_2:67998387-67998406 | Msa0419810:intron | 25.0% |
| ! | CTGATATTTAGATTACTAGA+AGG | + | chr3_2:67998441-67998460 | None:intergenic | 25.0% |
| AAAATAAATATGCCTTTGGC+GGG | + | chr3_2:67993989-67994008 | None:intergenic | 30.0% | |
| GGGAAAAATAAATATGCCTT+TGG | + | chr3_2:67993993-67994012 | None:intergenic | 30.0% | |
| ! | TCCCAATTAATTTGGTGAAA+AGG | - | chr3_2:67994009-67994028 | Msa0419810:three_prime_UTR | 30.0% |
| AGAAGAAAACGGTGAAATTA+GGG | + | chr3_2:67994155-67994174 | None:intergenic | 30.0% | |
| ATGTGTATAATGAAAATGGG+GGG | - | chr3_2:67994366-67994385 | Msa0419810:CDS | 30.0% | |
| TCAGATTCTAACCAACAATT+TGG | - | chr3_2:67994433-67994452 | Msa0419810:CDS | 30.0% | |
| CAATACAAAAGACATGAAAG+AGG | + | chr3_2:67994591-67994610 | None:intergenic | 30.0% | |
| ! | AAAAATCTGCCAGATTTTTC+AGG | + | chr3_2:67994725-67994744 | None:intergenic | 30.0% |
| ! | TGAAAAATCTGGCAGATTTT+TGG | - | chr3_2:67994724-67994743 | Msa0419810:CDS | 30.0% |
| CTATTCACTTACGGAAAAAT+GGG | + | chr3_2:67994762-67994781 | None:intergenic | 30.0% | |
| ! | AGCTATTGAAAGAAGTATGT+CGG | - | chr3_2:67994780-67994799 | Msa0419810:intron | 30.0% |
| GATTGAATTATGACATGATG+TGG | + | chr3_2:67994820-67994839 | None:intergenic | 30.0% | |
| TAATTCAATCTCTCTTGTCA+CGG | - | chr3_2:67994830-67994849 | Msa0419810:intron | 30.0% | |
| !! | TTGTAAACATTTTCAGGGAA+AGG | + | chr3_2:67994929-67994948 | None:intergenic | 30.0% |
| ! | GACAGTTTGTAAACATTTTC+AGG | + | chr3_2:67994935-67994954 | None:intergenic | 30.0% |
| AATTAAAATAAAAAGCGGGG+AGG | + | chr3_2:67995004-67995023 | None:intergenic | 30.0% | |
| AAAACTATCGTGGAAAAAGA+AGG | + | chr3_2:67995073-67995092 | None:intergenic | 30.0% | |
| ! | TTTTAGCATGTTGATCACTA+AGG | - | chr3_2:67995089-67995108 | Msa0419810:intron | 30.0% |
| TATGATGGCCAAGTTTATTA+TGG | - | chr3_2:67995338-67995357 | Msa0419810:CDS | 30.0% | |
| TCCACAAATTGCTTTCTATA+AGG | - | chr3_2:67995415-67995434 | Msa0419810:CDS | 30.0% | |
| ATCTACTTGTGTGTCATATT+AGG | - | chr3_2:67995567-67995586 | Msa0419810:intron | 30.0% | |
| TTTGGTCAATAATTAAGGTG+AGG | - | chr3_2:67995676-67995695 | Msa0419810:intron | 30.0% | |
| !! | AGAATTGATGACGAAACAAT+CGG | + | chr3_2:67995861-67995880 | None:intergenic | 30.0% |
| TAATTATTGAAACCTCCACT+TGG | + | chr3_2:67995923-67995942 | None:intergenic | 30.0% | |
| TGTTTGTTCAGTTTAATAGC+TGG | - | chr3_2:67996038-67996057 | Msa0419810:intron | 30.0% | |
| GTTTGTTCAGTTTAATAGCT+GGG | - | chr3_2:67996039-67996058 | Msa0419810:intron | 30.0% | |
| !!! | TTTTGAGATGTCATAGTATC+AGG | + | chr3_2:67996067-67996086 | None:intergenic | 30.0% |
| TGATGCTCTCAATCTTAATT+TGG | - | chr3_2:67996175-67996194 | Msa0419810:intron | 30.0% | |
| TTTGATGAGCAGAAAAATGT+AGG | + | chr3_2:67996227-67996246 | None:intergenic | 30.0% | |
| ! | GTAGATTAGTGAGATTTTCT+TGG | - | chr3_2:67996331-67996350 | Msa0419810:CDS | 30.0% |
| ! | ATTAGTGAGATTTTCTTGGT+TGG | - | chr3_2:67996335-67996354 | Msa0419810:CDS | 30.0% |
| TCTCACTAATTTCAGTTGTT+TGG | + | chr3_2:67996370-67996389 | None:intergenic | 30.0% | |
| TGTTTGACAGATGAAAACTA+GGG | + | chr3_2:67996452-67996471 | None:intergenic | 30.0% | |
| ATGTTTGACAGATGAAAACT+AGG | + | chr3_2:67996453-67996472 | None:intergenic | 30.0% | |
| ! | ATGGACATCTATTTTCAGTT+TGG | + | chr3_2:67996842-67996861 | None:intergenic | 30.0% |
| AAGATTGTCAAAATGCAACA+GGG | + | chr3_2:67997282-67997301 | None:intergenic | 30.0% | |
| TAAGATTGTCAAAATGCAAC+AGG | + | chr3_2:67997283-67997302 | None:intergenic | 30.0% | |
| AGCTCTATGTTAATTCAAAG+TGG | + | chr3_2:67997347-67997366 | None:intergenic | 30.0% | |
| AATATTTAACACCCAACAGA+AGG | + | chr3_2:67997381-67997400 | None:intergenic | 30.0% | |
| ! | CAACATTTTCCCTACAATTT+CGG | + | chr3_2:67997412-67997431 | None:intergenic | 30.0% |
| AAAATGTTGAAAGAGACTAG+TGG | - | chr3_2:67997423-67997442 | Msa0419810:intron | 30.0% | |
| ! | ATTGGTGATTGTTTGTCTTA+AGG | + | chr3_2:67997598-67997617 | None:intergenic | 30.0% |
| CTTGTAATGGCAGAAAAAAT+TGG | + | chr3_2:67997616-67997635 | None:intergenic | 30.0% | |
| !!! | CAATTTTTTCTGCCATTACA+AGG | - | chr3_2:67997614-67997633 | Msa0419810:CDS | 30.0% |
| TTCTGGATCTGATAATTCAT+TGG | - | chr3_2:67997700-67997719 | Msa0419810:CDS | 30.0% | |
| !!! | AATTTTTTTGAGGAGCTTCA+TGG | - | chr3_2:67998306-67998325 | Msa0419810:intron | 30.0% |
| CAGAAAAAAAAGAGAGGGAA+AGG | + | chr3_2:67994047-67994066 | None:intergenic | 35.0% | |
| GAATCGTAGGGTTTATGTTA+TGG | + | chr3_2:67994085-67994104 | None:intergenic | 35.0% | |
| ATTGGAGAAACTGAATCGTA+GGG | + | chr3_2:67994097-67994116 | None:intergenic | 35.0% | |
| ! | AACGGTGAAATTAGGGTTTT+GGG | + | chr3_2:67994148-67994167 | None:intergenic | 35.0% |
| ! | AAACGGTGAAATTAGGGTTT+TGG | + | chr3_2:67994149-67994168 | None:intergenic | 35.0% |
| GAGAAGAAAACGGTGAAATT+AGG | + | chr3_2:67994156-67994175 | None:intergenic | 35.0% | |
| CCTGAGTTATTTATTAGTCG+CGG | + | chr3_2:67994190-67994209 | None:intergenic | 35.0% | |
| GCTATTCACTTACGGAAAAA+TGG | + | chr3_2:67994763-67994782 | None:intergenic | 35.0% | |
| ! | GCTATTGAAAGAAGTATGTC+GGG | - | chr3_2:67994781-67994800 | Msa0419810:intron | 35.0% |
| AATTCAATCTCTCTTGTCAC+GGG | - | chr3_2:67994831-67994850 | Msa0419810:intron | 35.0% | |
| GATCTCACTAAGAAAAATCC+AGG | - | chr3_2:67994892-67994911 | Msa0419810:intron | 35.0% | |
| GGAAAGGAAAAAGAAAAACC+TGG | + | chr3_2:67994913-67994932 | None:intergenic | 35.0% | |
| TCAACATGCTAAAACTATCG+TGG | + | chr3_2:67995083-67995102 | None:intergenic | 35.0% | |
| ! | GAATTGGTTTCTCCTAGTAT+AGG | - | chr3_2:67995224-67995243 | Msa0419810:intron | 35.0% |
| GCTATTTGATGCGTTTATTC+TGG | - | chr3_2:67995259-67995278 | Msa0419810:CDS | 35.0% | |
| GTTTATTCTGGCAATGAACA+AGG | - | chr3_2:67995271-67995290 | Msa0419810:CDS | 35.0% | |
| CTCAAAGTTAGCACAAGAAA+GGG | + | chr3_2:67995297-67995316 | None:intergenic | 35.0% | |
| ACTCAAAGTTAGCACAAGAA+AGG | + | chr3_2:67995298-67995317 | None:intergenic | 35.0% | |
| GCCTTATAGAAAGCAATTTG+TGG | + | chr3_2:67995419-67995438 | None:intergenic | 35.0% | |
| ACAGATAAACAGGAAAACAG+AGG | + | chr3_2:67995465-67995484 | None:intergenic | 35.0% | |
| ACGTATGTGAACAGATAAAC+AGG | + | chr3_2:67995475-67995494 | None:intergenic | 35.0% | |
| TGTTCACATACGTGATGTAA+TGG | - | chr3_2:67995482-67995501 | Msa0419810:intron | 35.0% | |
| GTTCACATACGTGATGTAAT+GGG | - | chr3_2:67995483-67995502 | Msa0419810:intron | 35.0% | |
| TGCTTTGCATATTCCATTGT+GGG | - | chr3_2:67995516-67995535 | Msa0419810:intron | 35.0% | |
| AAAAAGAACTTCACCCACAA+TGG | + | chr3_2:67995532-67995551 | None:intergenic | 35.0% | |
| ! | ATGTTGATTGCATGTCAGAT+GGG | - | chr3_2:67995720-67995739 | Msa0419810:intron | 35.0% |
| TACATACTGATAGATCCAAG+TGG | - | chr3_2:67995905-67995924 | Msa0419810:intron | 35.0% | |
| ! | CAATCTTAATTTGGAAAGCC+AGG | - | chr3_2:67996184-67996203 | Msa0419810:intron | 35.0% |
| TTACTCGTTGTCTCCAATAA+TGG | - | chr3_2:67996585-67996604 | Msa0419810:intron | 35.0% | |
| ! | GAGTAGAAGCTTTGACATTT+CGG | + | chr3_2:67996717-67996736 | None:intergenic | 35.0% |
| ! | GACATCTATTTTCAGTTTGG+CGG | + | chr3_2:67996839-67996858 | None:intergenic | 35.0% |
| TGTTGAAACATAGATGATGC+TGG | - | chr3_2:67996938-67996957 | Msa0419810:intron | 35.0% | |
| CCAAAATTCTTCAATGCATG+TGG | + | chr3_2:67997085-67997104 | None:intergenic | 35.0% | |
| ! | CCACATGCATTGAAGAATTT+TGG | - | chr3_2:67997082-67997101 | Msa0419810:CDS | 35.0% |
| TTGCAATGAAGCTGGAATAA+AGG | - | chr3_2:67997252-67997271 | Msa0419810:CDS | 35.0% | |
| TTTCTGTTTACTCCTTCTGT+TGG | - | chr3_2:67997366-67997385 | Msa0419810:intron | 35.0% | |
| TTCTGTTTACTCCTTCTGTT+GGG | - | chr3_2:67997367-67997386 | Msa0419810:intron | 35.0% | |
| TTTCCATCTGTTCCTTGTAA+TGG | + | chr3_2:67997629-67997648 | None:intergenic | 35.0% | |
| ! | CAATTTAGCGAAAGTACAAC+TGG | + | chr3_2:67997673-67997692 | None:intergenic | 35.0% |
| !! | CGCTAAATTGTTGCTATTTC+TGG | - | chr3_2:67997683-67997702 | Msa0419810:CDS | 35.0% |
| TTCATTGGTCAATACCTAAC+AGG | - | chr3_2:67997715-67997734 | Msa0419810:CDS | 35.0% | |
| ! | GCAAATTTTCTCGCAGATAA+AGG | - | chr3_2:67997793-67997812 | Msa0419810:intron | 35.0% |
| ! | GGAACAGAACATTTCTAAGA+TGG | + | chr3_2:67997842-67997861 | None:intergenic | 35.0% |
| ! | GTCTTATTGCTGTTACTCAT+TGG | - | chr3_2:67997870-67997889 | Msa0419810:intron | 35.0% |
| AAGAGCCAATACAATTGTTG+AGG | - | chr3_2:67998031-67998050 | Msa0419810:intron | 35.0% | |
| GTCATCCTCAACAATTGTAT+TGG | + | chr3_2:67998039-67998058 | None:intergenic | 35.0% | |
| ATGATGATTGAGATGCATCA+GGG | + | chr3_2:67998178-67998197 | None:intergenic | 35.0% | |
| !!! | TGCTGCTGACAATTTTTTTG+AGG | - | chr3_2:67998296-67998315 | Msa0419810:intron | 35.0% |
| GATTGGAGAAACTGAATCGT+AGG | + | chr3_2:67994098-67994117 | None:intergenic | 40.0% | |
| GAAAAGGAGGAATTAGGGAT+TGG | + | chr3_2:67994115-67994134 | None:intergenic | 40.0% | |
| TAGCGGAAAAGGAGGAATTA+GGG | + | chr3_2:67994120-67994139 | None:intergenic | 40.0% | |
| GTGAAGGAGAGAGAAGAAAA+CGG | + | chr3_2:67994166-67994185 | None:intergenic | 40.0% | |
| ATTTATTAGTCGCGGAGTGA+AGG | + | chr3_2:67994182-67994201 | None:intergenic | 40.0% | |
| CCGCGACTAATAAATAACTC+AGG | - | chr3_2:67994187-67994206 | Msa0419810:three_prime_UTR | 40.0% | |
| TGTTGTGAAGACCTAGATTG+AGG | - | chr3_2:67994326-67994345 | Msa0419810:CDS | 40.0% | |
| AGACCTAGATTGAGGAATAG+TGG | - | chr3_2:67994334-67994353 | Msa0419810:CDS | 40.0% | |
| ACACCACTATTCCTCAATCT+AGG | + | chr3_2:67994340-67994359 | None:intergenic | 40.0% | |
| TAGATTGAGGAATAGTGGTG+TGG | - | chr3_2:67994339-67994358 | Msa0419810:CDS | 40.0% | |
| AGATTGAGGAATAGTGGTGT+GGG | - | chr3_2:67994340-67994359 | Msa0419810:CDS | 40.0% | |
| ATTTCAGCACCCATTCGAAA+TGG | - | chr3_2:67994393-67994412 | Msa0419810:CDS | 40.0% | |
| TTTCAGCACCCATTCGAAAT+GGG | - | chr3_2:67994394-67994413 | Msa0419810:CDS | 40.0% | |
| TGGAACAACCCATTTCGAAT+GGG | + | chr3_2:67994405-67994424 | None:intergenic | 40.0% | |
| AAGCAATTAGGGGTTGAACT+AGG | - | chr3_2:67994467-67994486 | Msa0419810:CDS | 40.0% | |
| ! | ATTGAAAGAAGTATGTCGGG+TGG | - | chr3_2:67994784-67994803 | Msa0419810:intron | 40.0% |
| ! | TTGAAAGAAGTATGTCGGGT+GGG | - | chr3_2:67994785-67994804 | Msa0419810:intron | 40.0% |
| ATTCAATCTCTCTTGTCACG+GGG | - | chr3_2:67994832-67994851 | Msa0419810:intron | 40.0% | |
| TGTAAGACTTTCTCCTTGAG+CGG | + | chr3_2:67994859-67994878 | None:intergenic | 40.0% | |
| ! | GGCTGCATTGATCAATATGA+TGG | - | chr3_2:67995323-67995342 | Msa0419810:CDS | 40.0% |
| TTCAGATGAACAATCCAAGC+TGG | - | chr3_2:67995376-67995395 | Msa0419810:CDS | 40.0% | |
| TCAGATGAACAATCCAAGCT+GGG | - | chr3_2:67995377-67995396 | Msa0419810:CDS | 40.0% | |
| CTGCTTTGCATATTCCATTG+TGG | - | chr3_2:67995515-67995534 | Msa0419810:intron | 40.0% | |
| ! | GATGTTGATTGCATGTCAGA+TGG | - | chr3_2:67995719-67995738 | Msa0419810:intron | 40.0% |
| ! | TGTTGATTGCATGTCAGATG+GGG | - | chr3_2:67995721-67995740 | Msa0419810:intron | 40.0% |
| ATACTGATAGATCCAAGTGG+AGG | - | chr3_2:67995908-67995927 | Msa0419810:intron | 40.0% | |
| ATCTAATCGACATGCGCAAA+TGG | + | chr3_2:67995967-67995986 | None:intergenic | 40.0% | |
| !! | AAGATTGAGAGCATCAATGC+TGG | + | chr3_2:67996171-67996190 | None:intergenic | 40.0% |
| GCAGGTGAAAGTTTATAACC+TGG | + | chr3_2:67996205-67996224 | None:intergenic | 40.0% | |
| ATGAGCAGAAAAATGTAGGC+AGG | + | chr3_2:67996223-67996242 | None:intergenic | 40.0% | |
| ! | AGTGAGATTTTCTTGGTTGG+TGG | - | chr3_2:67996338-67996357 | Msa0419810:CDS | 40.0% |
| !!! | AGATTTTCTTGGTTGGTGGA+TGG | - | chr3_2:67996342-67996361 | Msa0419810:CDS | 40.0% |
| CGAACATTCTGCTCAGTAAA+AGG | + | chr3_2:67996910-67996929 | None:intergenic | 40.0% | |
| ! | GTGACTGATTCAGAATCTCA+AGG | - | chr3_2:67997043-67997062 | Msa0419810:intron | 40.0% |
| ! | ATACTCTAAGAGAACTTGCG+AGG | - | chr3_2:67997122-67997141 | Msa0419810:CDS | 40.0% |
| ! | TACTCTAAGAGAACTTGCGA+GGG | - | chr3_2:67997123-67997142 | Msa0419810:CDS | 40.0% |
| AGTCTAACATTACCATCTGC+AGG | + | chr3_2:67997166-67997185 | None:intergenic | 40.0% | |
| ! | GCAGATGGTAATGTTAGACT+TGG | - | chr3_2:67997166-67997185 | Msa0419810:CDS | 40.0% |
| CATTACTTCGAAACCAACTG+CGG | + | chr3_2:67997213-67997232 | None:intergenic | 40.0% | |
| TCACAGCTAATGATGTGGAA+AGG | + | chr3_2:67997324-67997343 | None:intergenic | 40.0% | |
| TTCTGTACCACCGAAATTGT+AGG | - | chr3_2:67997399-67997418 | Msa0419810:intron | 40.0% | |
| TCTGTACCACCGAAATTGTA+GGG | - | chr3_2:67997400-67997419 | Msa0419810:intron | 40.0% | |
| ! | CATTTTCCCTACAATTTCGG+TGG | + | chr3_2:67997409-67997428 | None:intergenic | 40.0% |
| ! | TTACGGAGTAATCTTTAGGG+AGG | - | chr3_2:67997563-67997582 | Msa0419810:intron | 40.0% |
| ! | TCTGCGAGAAAATTTGCTTC+AGG | + | chr3_2:67997790-67997809 | None:intergenic | 40.0% |
| ACAGCAATAAGACAACAGAC+AGG | + | chr3_2:67997863-67997882 | None:intergenic | 40.0% | |
| ! | GCTGTTACTCATTGGTGTTT+AGG | - | chr3_2:67997878-67997897 | Msa0419810:intron | 40.0% |
| AGTGTCATCTTCAGTCTCTA+CGG | + | chr3_2:67997964-67997983 | None:intergenic | 40.0% | |
| !! | CAACTGGTTCTAAAGGTAAG+AGG | - | chr3_2:67998006-67998025 | Msa0419810:intron | 40.0% |
| ACACTTGAAGCAGATACAGT+AGG | - | chr3_2:67998152-67998171 | Msa0419810:intron | 40.0% | |
| GATGATGATTGAGATGCATC+AGG | + | chr3_2:67998179-67998198 | None:intergenic | 40.0% | |
| GATGCATCTCAATCATCATC+AGG | - | chr3_2:67998179-67998198 | Msa0419810:intron | 40.0% | |
| TAACCCGAAAATATTCCCGT+CGG | - | chr3_2:67998222-67998241 | Msa0419810:intron | 40.0% | |
| TGTTGTAAGTTTAGGTCCGA+CGG | + | chr3_2:67998241-67998260 | None:intergenic | 40.0% | |
| GCTTTACTAGTGATGCAGTT+AGG | - | chr3_2:67998343-67998362 | Msa0419810:intron | 40.0% | |
| AATTCGTGTCAATGCCATTG+AGG | - | chr3_2:67998467-67998486 | Msa0419810:intron | 40.0% | |
| TATGTGTTGTATCCCGCCAA+AGG | - | chr3_2:67993974-67993993 | Msa0419810:three_prime_UTR | 45.0% | |
| ! | GTAGCGGAAAAGGAGGAATT+AGG | + | chr3_2:67994121-67994140 | None:intergenic | 45.0% |
| ! | TTTGGGAATCGTAGCGGAAA+AGG | + | chr3_2:67994131-67994150 | None:intergenic | 45.0% |
| !!! | TAGGGTTTTGGGAATCGTAG+CGG | + | chr3_2:67994137-67994156 | None:intergenic | 45.0% |
| CTGGAACAACCCATTTCGAA+TGG | + | chr3_2:67994406-67994425 | None:intergenic | 45.0% | |
| GTAAGACTTTCTCCTTGAGC+GGG | + | chr3_2:67994858-67994877 | None:intergenic | 45.0% | |
| AGTCTTACACTCCATGTTCG+AGG | - | chr3_2:67994870-67994889 | Msa0419810:intron | 45.0% | |
| CTTAGTGAGATCCTCGAACA+TGG | + | chr3_2:67994884-67994903 | None:intergenic | 45.0% | |
| !! | CTAGTATAGGCACTGATCGT+CGG | - | chr3_2:67995237-67995256 | Msa0419810:intron | 45.0% |
| !! | TGTGCTAACTTTGAGTTGCG+TGG | - | chr3_2:67995302-67995321 | Msa0419810:CDS | 45.0% |
| TGTATACTTTGTGCCCAGCT+TGG | + | chr3_2:67995393-67995412 | None:intergenic | 45.0% | |
| GGAGATAAAACCATCTGCAG+TGG | + | chr3_2:67996150-67996169 | None:intergenic | 45.0% | |
| TTCAATGCATGTGGCACATG+TGG | + | chr3_2:67997076-67997095 | None:intergenic | 45.0% | |
| TCATTGCAAACGTGACAGGA+TGG | + | chr3_2:67997241-67997260 | None:intergenic | 45.0% | |
| AGCTTCATTGCAAACGTGAC+AGG | + | chr3_2:67997245-67997264 | None:intergenic | 45.0% | |
| TGTCACGTTTGCAATGAAGC+TGG | - | chr3_2:67997244-67997263 | Msa0419810:CDS | 45.0% | |
| AGTGGTCACAGCTAATGATG+TGG | + | chr3_2:67997329-67997348 | None:intergenic | 45.0% | |
| GTTGAAAGAGACTAGTGGTG+TGG | - | chr3_2:67997428-67997447 | Msa0419810:intron | 45.0% | |
| CTGCCATTACAAGGAACAGA+TGG | - | chr3_2:67997623-67997642 | Msa0419810:CDS | 45.0% | |
| ! | TCTGCTTTGGGTACTGCAAA+TGG | + | chr3_2:67997939-67997958 | None:intergenic | 45.0% |
| GTAGAGACTGAAGATGACAC+TGG | - | chr3_2:67997963-67997982 | Msa0419810:intron | 45.0% | |
| !! | CTTTAGAACCAGTTGCTCGT+TGG | + | chr3_2:67998001-67998020 | None:intergenic | 45.0% |
| !! | CAACGAGCAACTGGTTCTAA+AGG | - | chr3_2:67997999-67998018 | Msa0419810:intron | 45.0% |
| ATTGTTGAGGATGACGCAGT+TGG | - | chr3_2:67998044-67998063 | Msa0419810:intron | 45.0% | |
| ! | AGGTCCGACGGGAATATTTT+CGG | + | chr3_2:67998229-67998248 | None:intergenic | 45.0% |
| GTTGTAAGTTTAGGTCCGAC+GGG | + | chr3_2:67998240-67998259 | None:intergenic | 45.0% | |
| !! | TAGGGCGCTGTTGTAAGTTT+AGG | + | chr3_2:67998249-67998268 | None:intergenic | 45.0% |
| TAAACTTACAACAGCGCCCT+AGG | - | chr3_2:67998248-67998267 | Msa0419810:intron | 45.0% | |
| AAACTTACAACAGCGCCCTA+GGG | - | chr3_2:67998249-67998268 | Msa0419810:intron | 45.0% | |
| AGGTTTGTGATTCAAGCCAC+AGG | + | chr3_2:67998421-67998440 | None:intergenic | 45.0% | |
| GTGTCAATGCCATTGAGGTA+GGG | - | chr3_2:67998472-67998491 | Msa0419810:intron | 45.0% | |
| TGTCAATGCCATTGAGGTAG+GGG | - | chr3_2:67998473-67998492 | Msa0419810:intron | 45.0% | |
| !! | ATATAAATTAAAATAAAAAG+CGG | + | chr3_2:67995009-67995028 | None:intergenic | 5.0% |
| !! | AAACTAAAAATTATATAAAA+TGG | + | chr3_2:67995146-67995165 | None:intergenic | 5.0% |
| !!! | ATTTTATATAATTTTTAGTT+TGG | - | chr3_2:67995145-67995164 | Msa0419810:intron | 5.0% |
| !!! | TTTTATATAATTTTTAGTTT+GGG | - | chr3_2:67995146-67995165 | Msa0419810:intron | 5.0% |
| !! | CGAAATGGGTTGTTCCAGCT+CGG | - | chr3_2:67994408-67994427 | Msa0419810:CDS | 50.0% |
| ! | GTTAGAATCTGAGACCGAGC+TGG | + | chr3_2:67994425-67994444 | None:intergenic | 50.0% |
| CGACGATCAGTGCCTATACT+AGG | + | chr3_2:67995239-67995258 | None:intergenic | 50.0% | |
| TCGACATGCGCAAATGGAAG+AGG | + | chr3_2:67995961-67995980 | None:intergenic | 50.0% | |
| GTTCAAGATGCCACTGCAGA+TGG | - | chr3_2:67996137-67996156 | Msa0419810:intron | 50.0% | |
| ATGCATGTGGCACATGTGGT+TGG | + | chr3_2:67997072-67997091 | None:intergenic | 50.0% | |
| CATTCCTTGATCTCCGCAGT+TGG | - | chr3_2:67997197-67997216 | Msa0419810:CDS | 50.0% | |
| GAAACCAACTGCGGAGATCA+AGG | + | chr3_2:67997204-67997223 | None:intergenic | 50.0% | |
| TTTGCACAGCTCTGCCTGTT+AGG | + | chr3_2:67997732-67997751 | None:intergenic | 50.0% | |
| GCAAAAGCTTGCCCAAGTTG+TGG | - | chr3_2:67997903-67997922 | Msa0419810:intron | 50.0% | |
| ! | GCCATGAAGTGCCACAACTT+GGG | + | chr3_2:67997917-67997936 | None:intergenic | 50.0% |
| GTCTCTACGGCTTCTGCTTT+GGG | + | chr3_2:67997951-67997970 | None:intergenic | 50.0% | |
| AGTCTCTACGGCTTCTGCTT+TGG | + | chr3_2:67997952-67997971 | None:intergenic | 50.0% | |
| CTGAAGATGACACTGGACCT+AGG | - | chr3_2:67997970-67997989 | Msa0419810:intron | 50.0% | |
| !! | TTGTCATGCTGGCTCTCAGT+AGG | + | chr3_2:67998098-67998117 | None:intergenic | 50.0% |
| ACTGAGAGCCAGCATGACAA+TGG | - | chr3_2:67998098-67998117 | Msa0419810:intron | 50.0% | |
| AGAGCCAGCATGACAATGGA+CGG | - | chr3_2:67998102-67998121 | Msa0419810:intron | 50.0% | |
| ! | GGTCCGACGGGAATATTTTC+GGG | + | chr3_2:67998228-67998247 | None:intergenic | 50.0% |
| TGTTGTGGTTGACTGACCTG+TGG | - | chr3_2:67998402-67998421 | Msa0419810:intron | 50.0% | |
| CGTGTCAATGCCATTGAGGT+AGG | - | chr3_2:67998471-67998490 | Msa0419810:intron | 50.0% | |
| CATCAATGCCCCTACCTCAA+TGG | + | chr3_2:67998484-67998503 | None:intergenic | 50.0% | |
| ! | GGGAATCGTAGCGGAAAAGG+AGG | + | chr3_2:67994128-67994147 | None:intergenic | 55.0% |
| TGCATGTCAGATGGGGTTGC+TGG | - | chr3_2:67995728-67995747 | Msa0419810:intron | 55.0% | |
| GCATGTCAGATGGGGTTGCT+GGG | - | chr3_2:67995729-67995748 | Msa0419810:intron | 55.0% | |
| GAGAACTTGCGAGGGACTTG+TGG | - | chr3_2:67997131-67997150 | Msa0419810:CDS | 55.0% | |
| ACTTGCGAGGGACTTGTGGT+TGG | - | chr3_2:67997135-67997154 | Msa0419810:CDS | 55.0% | |
| TGGTTGGACATGCCTGCAGA+TGG | - | chr3_2:67997151-67997170 | Msa0419810:CDS | 55.0% | |
| GCCCAAGTTGTGGCACTTCA+TGG | - | chr3_2:67997913-67997932 | Msa0419810:intron | 55.0% | |
| ! | GGCCATGAAGTGCCACAACT+TGG | + | chr3_2:67997918-67997937 | None:intergenic | 55.0% |
| !! | GTTGCTCGTTGGCTTTGCCT+AGG | + | chr3_2:67997990-67998009 | None:intergenic | 55.0% |
| AGGCAAAGCCAACGAGCAAC+TGG | - | chr3_2:67997990-67998009 | Msa0419810:intron | 55.0% | |
| CGCAGTTGGATGCAGCAATC+AGG | - | chr3_2:67998058-67998077 | Msa0419810:intron | 55.0% | |
| GAGCCAGCATGACAATGGAC+GGG | - | chr3_2:67998103-67998122 | Msa0419810:intron | 55.0% | |
| ACAATGGACGGGCACGAACA+AGG | - | chr3_2:67998114-67998133 | Msa0419810:intron | 55.0% | |
| GCATCGCCTAGCATTCCCTA+GGG | + | chr3_2:67998267-67998286 | None:intergenic | 55.0% | |
| TGCATCGCCTAGCATTCCCT+AGG | + | chr3_2:67998268-67998287 | None:intergenic | 55.0% | |
| GTGCCCGTCCATTGTCATGC+TGG | + | chr3_2:67998109-67998128 | None:intergenic | 60.0% | |
| GACGGGCACGAACAAGGACT+AGG | - | chr3_2:67998120-67998139 | Msa0419810:intron | 60.0% | |
| ACAGCGCCCTAGGGAATGCT+AGG | - | chr3_2:67998258-67998277 | Msa0419810:intron | 60.0% | |
| CTTGTCACGGGGCCCGCTCA+AGG | - | chr3_2:67994843-67994862 | Msa0419810:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 67993962 | 67998561 | 67993962 | ID=Msa0419810;Name=Msa0419810 |
| chr3_2 | mRNA | 67993962 | 67998561 | 67993962 | ID=Msa0419810-mRNA-1;Parent=Msa0419810;Name=Msa0419810-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.83|0.85|0.85|0.66|0.57|7|311|360 |
| chr3_2 | exon | 67993962 | 67994623 | 67993962 | ID=Msa0419810-mRNA-1:exon:15966;Parent=Msa0419810-mRNA-1 |
| chr3_2 | exon | 67994709 | 67994786 | 67994709 | ID=Msa0419810-mRNA-1:exon:15965;Parent=Msa0419810-mRNA-1 |
| chr3_2 | exon | 67995250 | 67995489 | 67995250 | ID=Msa0419810-mRNA-1:exon:15964;Parent=Msa0419810-mRNA-1 |
| chr3_2 | exon | 67996318 | 67996398 | 67996318 | ID=Msa0419810-mRNA-1:exon:15963;Parent=Msa0419810-mRNA-1 |
| chr3_2 | exon | 67997081 | 67997277 | 67997081 | ID=Msa0419810-mRNA-1:exon:15962;Parent=Msa0419810-mRNA-1 |
| chr3_2 | exon | 67997610 | 67997741 | 67997610 | ID=Msa0419810-mRNA-1:exon:15961;Parent=Msa0419810-mRNA-1 |
| chr3_2 | exon | 67998558 | 67998561 | 67998558 | ID=Msa0419810-mRNA-1:exon:15960;Parent=Msa0419810-mRNA-1 |
| chr3_2 | CDS | 67998558 | 67998561 | 67998558 | ID=Msa0419810-mRNA-1:cds;Parent=Msa0419810-mRNA-1 |
| chr3_2 | CDS | 67997610 | 67997741 | 67997610 | ID=Msa0419810-mRNA-1:cds;Parent=Msa0419810-mRNA-1 |
| chr3_2 | CDS | 67997081 | 67997277 | 67997081 | ID=Msa0419810-mRNA-1:cds;Parent=Msa0419810-mRNA-1 |
| chr3_2 | CDS | 67996318 | 67996398 | 67996318 | ID=Msa0419810-mRNA-1:cds;Parent=Msa0419810-mRNA-1 |
| chr3_2 | CDS | 67995250 | 67995489 | 67995250 | ID=Msa0419810-mRNA-1:cds;Parent=Msa0419810-mRNA-1 |
| chr3_2 | CDS | 67994709 | 67994786 | 67994709 | ID=Msa0419810-mRNA-1:cds;Parent=Msa0419810-mRNA-1 |
| chr3_2 | CDS | 67994273 | 67994623 | 67994273 | ID=Msa0419810-mRNA-1:cds;Parent=Msa0419810-mRNA-1 |
| chr3_2 | three_prime_UTR | 67993962 | 67994272 | 67993962 | ID=Msa0419810-mRNA-1:three_prime_utr;Parent=Msa0419810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
