AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0421630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0421630 MtrunA17_Chr3g0122081 99.222 771 6 0 1 771 1 771 0.0 1587
Msa0421630 MtrunA17_Chr8g0338351 63.874 764 268 5 8 770 7 763 0.0 1025
Msa0421630 MtrunA17_Chr1g0206271 44.171 772 399 13 4 770 1 745 0.0 635
Msa0421630 MtrunA17_Chr6g0471961 68.276 145 37 2 543 679 1 144 1.45e-61 204
Msa0421630 MtrunA17_Chr7g0270801 23.197 707 435 23 56 734 182 808 1.40e-31 132
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0421630 AT1G05520.1 78.907 787 146 4 1 771 1 783 0.0 1291
Msa0421630 AT3G23660.1 79.076 779 141 5 1 771 1 765 0.0 1275
Msa0421630 AT3G23660.2 76.522 805 141 6 1 771 1 791 0.0 1261
Msa0421630 AT4G14160.2 77.477 777 164 4 1 771 1 772 0.0 1245
Msa0421630 AT4G14160.1 77.378 778 164 5 1 771 1 773 0.0 1241
Msa0421630 AT4G14160.3 75.248 606 139 4 1 600 1 601 0.0 931
Msa0421630 AT2G21630.1 58.279 767 301 10 10 770 8 761 0.0 892
Msa0421630 AT5G43670.1 43.317 808 390 11 10 770 7 793 0.0 677
Msa0421630 AT4G01810.3 22.772 707 438 23 56 734 201 827 3.30e-34 141
Msa0421630 AT4G01810.1 22.772 707 438 23 56 734 201 827 3.30e-34 141
Msa0421630 AT4G01810.2 22.772 707 438 23 56 734 201 827 3.30e-34 141

Find 242 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATCTTTGGAAATCTCTT+TGG 0.200075 3_2:+70660894 None:intergenic
TAGAGGAGACTGACAGTTTA+TGG 0.202523 3_2:-70655906 Msa0421630:three_prime_UTR
TTCGCCTCTGTTCTAAGTTT+GGG 0.207149 3_2:-70657021 Msa0421630:CDS
ACCGCCAGGACCACCTTTAA+TGG 0.226756 3_2:+70660822 None:intergenic
GATTTCCAAAGATCAGATTT+TGG 0.249496 3_2:-70660887 Msa0421630:CDS
AAATCGTGAAACACCGGAAT+TGG 0.258703 3_2:+70660777 None:intergenic
TGGATTCTATACTTTGGTTT+GGG 0.269503 3_2:-70655886 Msa0421630:three_prime_UTR
ATTCGCCTCTGTTCTAAGTT+TGG 0.272083 3_2:-70657022 Msa0421630:CDS
CTCAAAGGAAATCAAAATTC+AGG 0.273413 3_2:-70658379 Msa0421630:CDS
TTGTTCCAAAATCTGATCTT+TGG 0.274830 3_2:+70660882 None:intergenic
ATTCATATGTACGTTGAGTT+TGG 0.276408 3_2:-70655700 Msa0421630:three_prime_UTR
ATGGATTCTATACTTTGGTT+TGG 0.286310 3_2:-70655887 Msa0421630:three_prime_UTR
TTACAACTGCAGCAGTTTCT+TGG 0.303545 3_2:+70657459 None:intergenic
ATCCTTCGGGACTCAGGTTC+AGG 0.304450 3_2:-70660968 Msa0421630:CDS
TAGATATGCTTCTCTGAAAA+TGG 0.316254 3_2:-70657432 Msa0421630:CDS
TCAGGTTCAGGTTCATGAAT+TGG 0.321846 3_2:-70660956 Msa0421630:CDS
CGTTGTAATGAGGTGGAAAA+TGG 0.324821 3_2:+70661202 None:intergenic
TCGGCTCTTGGTAGAGCAAT+TGG 0.333563 3_2:-70661024 Msa0421630:CDS
TTGCTCAGTGCTTGTAATCC+TGG 0.340613 3_2:-70660538 Msa0421630:CDS
CAGGTTCAGGTTCATGAATT+GGG 0.353755 3_2:-70660955 Msa0421630:CDS
ACAGGGGAAGGAGGAGGATT+AGG 0.354971 3_2:+70661102 None:intergenic
TTCACTGCTTTCTTAAAGTA+AGG 0.356416 3_2:+70659957 None:intergenic
TGCACACAAACCTGGTGTTC+TGG 0.358942 3_2:+70656572 None:intergenic
GGAGGATTAGGATCGGTATG+AGG 0.359326 3_2:+70661114 None:intergenic
ATCAAAATTCAGGGAATTGT+TGG 0.363724 3_2:-70658369 Msa0421630:CDS
CGAAAGTATGCAGTCTCATC+TGG 0.366629 3_2:+70656809 None:intergenic
TTCATATGTACGTTGAGTTT+GGG 0.367123 3_2:-70655699 Msa0421630:three_prime_UTR
TTGATTTCACCGCTAAGATC+TGG 0.369179 3_2:-70661251 Msa0421630:CDS
GTCGCAGATTGAACATAAAC+TGG 0.370469 3_2:+70656939 None:intergenic
TTACCTGATAATGCTCTTGT+TGG 0.375458 3_2:-70660997 Msa0421630:CDS
GTTGTCCTGTCTGAAAGTTT+TGG 0.375902 3_2:-70658817 Msa0421630:CDS
CCGATCTCTAATTATTGCTT+GGG 0.380772 3_2:+70656296 None:intergenic
GCTGCCAGGAGACCCATTAA+AGG 0.381421 3_2:-70660835 Msa0421630:CDS
TGGTTCCGTTGATAACAAAA+TGG 0.383931 3_2:+70661222 None:intergenic
TCCATAAAATAAAATTCAAC+AGG 0.385298 3_2:+70655734 None:intergenic
ATATCTGGGCCAAAACAAAT+AGG 0.388048 3_2:+70655592 None:intergenic
CGAAGCACTAATTGACCATC+TGG 0.389898 3_2:+70657895 None:intergenic
GTGAAATCAACGCGGGAGTA+AGG 0.395323 3_2:+70661264 None:intergenic
ACCGATCTCTAATTATTGCT+TGG 0.397173 3_2:+70656295 None:intergenic
CTTTGAGCATCTGCAAAGGC+TGG 0.397327 3_2:-70655953 Msa0421630:CDS
CTATCATCTGCCCTCAAGAT+TGG 0.398230 3_2:+70655926 None:intergenic
GTGCTTGTAATCCTGGGACT+GGG 0.398443 3_2:-70660531 Msa0421630:CDS
TTTGTGAAGTAAGCTTATAC+AGG 0.401961 3_2:-70655426 Msa0421630:three_prime_UTR
GGTCGTTTGCCAGGTGGAAC+AGG 0.406022 3_2:+70660601 None:intergenic
TTGCCCAACATAACCTTGTA+AGG 0.406762 3_2:+70658024 None:intergenic
ACTGCCTGCACCAGCATTGT+TGG 0.412650 3_2:-70656708 Msa0421630:CDS
ATGGTCTTATTGCAGTTACC+AGG 0.412803 3_2:-70657920 Msa0421630:intron
AACCCAACAAGAGCATTATC+AGG 0.413969 3_2:+70660994 None:intergenic
GAGAGGGGAACACAACAATA+TGG 0.415405 3_2:-70658157 Msa0421630:CDS
ACTTTCGCATGTTGTTAAAC+CGG 0.419078 3_2:-70656793 Msa0421630:CDS
TACCTGATAATGCTCTTGTT+GGG 0.419336 3_2:-70660996 Msa0421630:CDS
GAGGATGGGGAGCAATCTCT+TGG 0.420007 3_2:-70658757 Msa0421630:CDS
AGTGCTTGTAATCCTGGGAC+TGG 0.428437 3_2:-70660532 Msa0421630:CDS
ATAAGGAAGACTGGGGATAT+CGG 0.430962 3_2:+70661326 None:intergenic
TGCTCAGTGCTTGTAATCCT+GGG 0.433431 3_2:-70660537 Msa0421630:CDS
GGCGAGTGGGATAACGCATT+TGG 0.433530 3_2:+70661377 None:intergenic
TCGGTTTCCTGTTCCTAGAT+TGG 0.434541 3_2:-70656277 Msa0421630:CDS
AATCGTGAAACACCGGAATT+GGG 0.437601 3_2:+70660778 None:intergenic
ATCTGGATTAATTTACATAG+TGG 0.437816 3_2:-70655551 Msa0421630:three_prime_UTR
CGGCTCTTGGTAGAGCAATT+GGG 0.438079 3_2:-70661023 Msa0421630:CDS
TCCGTATGACATGGAACGTC+TGG 0.441775 3_2:-70661422 Msa0421630:CDS
TGCAAAACAGCTGGTTAACC+AGG 0.443952 3_2:-70659919 Msa0421630:CDS
GTTTAACATAATTGTGCAAA+GGG 0.445060 3_2:-70661598 Msa0421630:five_prime_UTR
TGGGGCTAGAATTATAGCTT+TGG 0.450259 3_2:-70660512 Msa0421630:CDS
AAAGGTGGTCCTGGCGGTAT+TGG 0.454172 3_2:-70660817 Msa0421630:CDS
CATCGAGCAGGTCGTTTGCC+AGG 0.456521 3_2:+70660592 None:intergenic
CCGCCAGGACCACCTTTAAT+GGG 0.457134 3_2:+70660823 None:intergenic
TGATCACACACTACCAATCT+AGG 0.458169 3_2:+70656264 None:intergenic
AATAGCTCAATGGCGCAACT+TGG 0.459058 3_2:-70656609 Msa0421630:CDS
AGGGTTGAGAATGGAGGTGC+AGG 0.459989 3_2:+70661284 None:intergenic
TTTGGGCATTGCGGAAAGAA+AGG 0.462055 3_2:-70655682 Msa0421630:three_prime_UTR
AGAGATTAATTATCTCAAAT+CGG 0.462983 3_2:-70661043 Msa0421630:CDS
GGTGGTCCTGGCGGTATTGG+TGG 0.463044 3_2:-70660814 Msa0421630:CDS
TAAGGAAGACTGGGGATATC+GGG 0.463197 3_2:+70661327 None:intergenic
CACACTACCAATCTAGGAAC+AGG 0.463957 3_2:+70656270 None:intergenic
ATTTGATTGCACACGGTGGT+TGG 0.465256 3_2:-70657056 Msa0421630:CDS
TATCGGGATGAGAACGGATG+AGG 0.465331 3_2:+70661343 None:intergenic
AATTATCTCAAATCGGCTCT+TGG 0.465455 3_2:-70661036 Msa0421630:CDS
ATGAATCTAGCAACAGAATC+CGG 0.466759 3_2:+70656663 None:intergenic
AGAATTATAGCTTTGGTTGG+AGG 0.468089 3_2:-70660505 Msa0421630:CDS
CTACAGCAGCATAGCAAATG+AGG 0.471255 3_2:-70655639 Msa0421630:three_prime_UTR
CAGAATCCGGTCTGCAGCAA+TGG 0.471839 3_2:+70656676 None:intergenic
AGTTTATGGATTCTATACTT+TGG 0.475637 3_2:-70655892 Msa0421630:three_prime_UTR
GATGCTCAAAGAAAACTTGA+AGG 0.476433 3_2:+70655965 None:intergenic
GAATTATAGCTTTGGTTGGA+GGG 0.477448 3_2:-70660504 Msa0421630:CDS
TGTTGTGTTCCCCTCTCCTA+TGG 0.478248 3_2:+70658163 None:intergenic
TTGCAACGGAGGGGTGCATA+AGG 0.479670 3_2:+70661309 None:intergenic
ACCACCTTTAATGGGTCTCC+TGG 0.482558 3_2:+70660831 None:intergenic
GGTCCTGGCGGTATTGGTGG+TGG 0.482603 3_2:-70660811 Msa0421630:CDS
GTTAAGAACAAAGGAAAGAA+AGG 0.482616 3_2:+70655808 None:intergenic
CTTCTTCTAATTCTGCTGCC+AGG 0.483261 3_2:-70660849 Msa0421630:CDS
TGTACCTGCAGTTCCTTACA+AGG 0.483740 3_2:-70658037 Msa0421630:intron
AAAGTCGCAGTTGAAAGAAC+TGG 0.484739 3_2:-70658847 Msa0421630:CDS
AGAAACTGCTGCAGTTGTAA+TGG 0.486703 3_2:-70657456 Msa0421630:CDS
GCTAGAATTATAGCTTTGGT+TGG 0.486748 3_2:-70660508 Msa0421630:CDS
TCTTATTCTTCAATACATGC+AGG 0.488546 3_2:+70655767 None:intergenic
TGCACCAGCATTGTTGGATG+TGG 0.489325 3_2:-70656702 Msa0421630:CDS
TGAGGGTCTTGCAAAACAGC+TGG 0.493827 3_2:-70659928 Msa0421630:CDS
CTTTCGCATGTTGTTAAACC+GGG 0.497065 3_2:-70656792 Msa0421630:CDS
ATGCAGGACACACACATCAT+TGG 0.497362 3_2:+70655856 None:intergenic
TAAACTTTAAGCGAGGACTT+TGG 0.498896 3_2:+70655345 None:intergenic
CCCAAGCAATAATTAGAGAT+CGG 0.501519 3_2:-70656296 Msa0421630:CDS
ATTGCACACGGTGGTTGGAT+AGG 0.502936 3_2:-70657051 Msa0421630:CDS
GAGGGGTGCATAAGGAAGAC+TGG 0.504207 3_2:+70661317 None:intergenic
ACGGACTCCGTCGATTCCCT+CGG 0.506453 3_2:+70661440 None:intergenic
GGCTGGCTGTCCAATCTTGA+GGG 0.507848 3_2:-70655936 Msa0421630:exon
GGATTTAATGTAAAAGATGA+TGG 0.509344 3_2:+70656980 None:intergenic
ATCATCAACGATGTCGGAGA+TGG 0.510358 3_2:-70661475 Msa0421630:exon
CGACAACAGTAACTAGAAGA+TGG 0.513117 3_2:-70657870 Msa0421630:CDS
CCTTTGAGCAATTTATCTCA+AGG 0.514111 3_2:+70658394 None:intergenic
TCAAAGGAAATCAAAATTCA+GGG 0.514523 3_2:-70658378 Msa0421630:CDS
ATAATTCATCAAAATCAAAT+CGG 0.516378 3_2:-70661515 Msa0421630:five_prime_UTR
GGAACTGCAGGTACAGTTGT+GGG 0.516592 3_2:+70658045 None:intergenic
TGCTTGTAATCCTGGGACTG+GGG 0.517545 3_2:-70660530 Msa0421630:CDS
AGTTGTGGGTTGACACCACC+TGG 0.520955 3_2:+70658059 None:intergenic
TGTTGGACCTTGCACATCGA+TGG 0.521951 3_2:-70658352 Msa0421630:CDS
AGGCTGGCTGTCCAATCTTG+AGG 0.522676 3_2:-70655937 Msa0421630:exon
TGCAGTTACCAGGGCCCAGA+TGG 0.523337 3_2:-70657910 Msa0421630:intron
AGACCCATTAAAGGTGGTCC+TGG 0.524454 3_2:-70660826 Msa0421630:CDS
ACATCCAACAATGCTGGTGC+AGG 0.529135 3_2:+70656704 None:intergenic
GTTGCATTGAGTGTTGCAGC+TGG 0.529823 3_2:-70660562 Msa0421630:CDS
TGGCTTCCATTGCTGCAGAC+CGG 0.530088 3_2:-70656682 Msa0421630:CDS
GTTGGAGGGCCATGCACTGA+AGG 0.531152 3_2:-70660490 Msa0421630:CDS
GAGGATTAGGATCGGTATGA+GGG 0.531440 3_2:+70661115 None:intergenic
ACAAACTGATATACCGTGCC+AGG 0.533185 3_2:+70660466 None:intergenic
AAACGACCTGCTCGATGTAC+CGG 0.533519 3_2:-70660586 Msa0421630:CDS
GTGTATTCGCAATCAGAAGC+AGG 0.534381 3_2:+70660748 None:intergenic
GCACCACCACCAATACCGCC+AGG 0.534883 3_2:+70660808 None:intergenic
CTTTGAGCAATTTATCTCAA+GGG 0.536388 3_2:+70658395 None:intergenic
GAAACACCGGAATTGGGAAA+AGG 0.537131 3_2:+70660784 None:intergenic
TTGAAGAATAAGAGAAGCAA+GGG 0.538160 3_2:-70655757 Msa0421630:three_prime_UTR
GTGCCAGGTCCTTCAGTGCA+TGG 0.538214 3_2:+70660481 None:intergenic
AATGCGCACGAGATGGCTGC+TGG 0.539530 3_2:-70656018 Msa0421630:CDS
ATTGCTTGGGAATCATCTTG+TGG 0.540119 3_2:+70656309 None:intergenic
AGGGAGATTGTGGCGGCGAG+TGG 0.542010 3_2:+70661363 None:intergenic
GTGTGATCAACACGGTTCCC+AGG 0.543667 3_2:-70656250 Msa0421630:intron
ATAGCTCAATGGCGCAACTT+GGG 0.545562 3_2:-70656608 Msa0421630:CDS
ACTTAGAACAGAGGCGAATG+AGG 0.545572 3_2:+70657026 None:intergenic
AATTTATTAAGAGAGTGAAA+AGG 0.545711 3_2:-70661644 Msa0421630:five_prime_UTR
TCGCCTCTGTTCTAAGTTTG+GGG 0.545724 3_2:-70657020 Msa0421630:CDS
ATAATTCTAGCCCCAGTCCC+AGG 0.547661 3_2:+70660520 None:intergenic
TGTTTAACATAATTGTGCAA+AGG 0.548071 3_2:-70661599 Msa0421630:five_prime_UTR
TCAGAAATCGCGTTGTAATG+AGG 0.548123 3_2:+70661192 None:intergenic
GGGCCATGCACTGAAGGACC+TGG 0.548285 3_2:-70660484 Msa0421630:CDS
AGGGGTGCATAAGGAAGACT+GGG 0.548496 3_2:+70661318 None:intergenic
GGATTCTATACTTTGGTTTG+GGG 0.550880 3_2:-70655885 Msa0421630:three_prime_UTR
CTTCTCTCTGTTAAGAACAA+AGG 0.552238 3_2:+70655799 None:intergenic
GCTGATACCGCCATAGGAGA+GGG 0.552355 3_2:-70658173 Msa0421630:CDS
ATAACCTTGTAAGGAACTGC+AGG 0.554745 3_2:+70658033 None:intergenic
CGGACTCCGTCGATTCCCTC+GGG 0.556274 3_2:+70661441 None:intergenic
TATTCAACGGTGGTGTATTG+AGG 0.556523 3_2:+70661144 None:intergenic
TCTGTTGCTGATACCGCCAT+AGG 0.556798 3_2:-70658179 Msa0421630:CDS
GAGTGGGATAACGCATTTGG+AGG 0.557533 3_2:+70661380 None:intergenic
AGATCTTTATGAGAACGCAC+TGG 0.557658 3_2:+70659996 None:intergenic
AGAACGGATGAGGGAGATTG+TGG 0.559381 3_2:+70661353 None:intergenic
CTAATTGACCATCTGGGCCC+TGG 0.560974 3_2:+70657902 None:intergenic
TATTGAGGATAGAGTTCACC+AGG 0.561257 3_2:+70661159 None:intergenic
CACAAACCTGGTGTTCTGGT+TGG 0.561924 3_2:+70656576 None:intergenic
GCGGGAGTAAGGGTTGAGAA+TGG 0.562790 3_2:+70661275 None:intergenic
GATCAATGGCCTGTTCCACC+TGG 0.564462 3_2:-70660610 Msa0421630:CDS
TGAAATCAACGCGGGAGTAA+GGG 0.568126 3_2:+70661265 None:intergenic
GAAGCCACATCCAACAATGC+TGG 0.572390 3_2:+70656698 None:intergenic
GCAACTCCGGTACATCGAGC+AGG 0.572772 3_2:+70660580 None:intergenic
ATTTCTGAAACTCATCTCCC+TGG 0.574744 3_2:-70661177 Msa0421630:CDS
GTTATTCAGGAATTGGCTCA+AGG 0.575831 3_2:-70657488 Msa0421630:intron
GGGAGATTGTGGCGGCGAGT+GGG 0.576660 3_2:+70661364 None:intergenic
ATATAATAATGCGCACGAGA+TGG 0.576745 3_2:-70656025 Msa0421630:CDS
AACTTTCAGACAGGACAACA+AGG 0.579452 3_2:+70658821 None:intergenic
ATCTTGAGGGCAGATGATAG+AGG 0.579806 3_2:-70655923 Msa0421630:exon
AGGAACTGCAGGTACAGTTG+TGG 0.581947 3_2:+70658044 None:intergenic
ATCATCATCATCAACGATGT+CGG 0.582002 3_2:-70661481 Msa0421630:exon
ATGGGATGACAATAGCTCAA+TGG 0.585675 3_2:-70656619 Msa0421630:CDS
GCGACGCTCACAGTTTGTAC+AGG 0.585828 3_2:-70656921 Msa0421630:intron
ATCGGGATGAGAACGGATGA+GGG 0.588713 3_2:+70661344 None:intergenic
TGGTCTTATTGCAGTTACCA+GGG 0.591873 3_2:-70657919 Msa0421630:intron
TCGACGGAGTCCGTATGACA+TGG 0.594875 3_2:-70661431 Msa0421630:CDS
AATGACCAAAACTTTCAGAC+AGG 0.595747 3_2:+70658812 None:intergenic
AGTGATCGTTCAAATACTCC+AGG 0.597059 3_2:-70658077 Msa0421630:CDS
TGAATGCAACAGCATAATGC+AGG 0.598190 3_2:+70655840 None:intergenic
ATTGAAGAATAAGAGAAGCA+AGG 0.599916 3_2:-70655758 Msa0421630:three_prime_UTR
TACAGCAGCATAGCAAATGA+GGG 0.600112 3_2:-70655638 Msa0421630:three_prime_UTR
AGGAATTGCAGAGAGATCAA+TGG 0.601153 3_2:-70660624 Msa0421630:CDS
ACAGATCCCGAGGGAATCGA+CGG 0.601592 3_2:-70661447 Msa0421630:CDS
ACCTTCTCCATCGATGTGCA+AGG 0.603833 3_2:+70658345 None:intergenic
TCGCAGATTGAACATAAACT+GGG 0.603920 3_2:+70656940 None:intergenic
GCATTATTATATGTTGCTGA+CGG 0.604893 3_2:+70656036 None:intergenic
TGGGGATATCGGGATGAGAA+CGG 0.606733 3_2:+70661337 None:intergenic
CCTTGAGATAAATTGCTCAA+AGG 0.607083 3_2:-70658394 Msa0421630:CDS
AATGAATATGATATTAGTGA+TGG 0.607798 3_2:+70656737 None:intergenic
GATCTTTATGAGAACGCACT+GGG 0.608467 3_2:+70659997 None:intergenic
CCGGGAAAATATTAATAATG+CGG 0.608982 3_2:-70656774 Msa0421630:CDS
TGCTGATACCGCCATAGGAG+AGG 0.609019 3_2:-70658174 Msa0421630:CDS
GACAACAGTAACTAGAAGAT+GGG 0.609204 3_2:-70657869 Msa0421630:CDS
ACCTTGCACATCGATGGAGA+AGG 0.610130 3_2:-70658346 Msa0421630:intron
GCCAGACGTTCCATGTCATA+CGG 0.610591 3_2:+70661421 None:intergenic
ATGCACTGAAGGACCTGGCA+CGG 0.612108 3_2:-70660479 Msa0421630:intron
CCCATTAAAGGTGGTCCTGG+CGG 0.614447 3_2:-70660823 Msa0421630:CDS
TGTGTTCCCCTCTCCTATGG+CGG 0.618650 3_2:+70658166 None:intergenic
AACCTGAACCTGAGTCCCGA+AGG 0.620756 3_2:+70660966 None:intergenic
TACGTTGAGTTTGGGCATTG+CGG 0.621664 3_2:-70655691 Msa0421630:three_prime_UTR
TGGACAGATCCAGATCTTAG+CGG 0.625634 3_2:+70661242 None:intergenic
TTCTCTGAAAATGGAGACAG+AGG 0.627078 3_2:-70657423 Msa0421630:intron
GTCGCAGTTGAAAGAACTGG+TGG 0.633285 3_2:-70658844 Msa0421630:CDS
ATGAGGGATATGATATTCAA+CGG 0.634959 3_2:+70661131 None:intergenic
TATGTAAATTAATCCAGATG+AGG 0.635723 3_2:+70655555 None:intergenic
TGCAACACTCAATGCAACTC+CGG 0.636467 3_2:+70660567 None:intergenic
AGGAAACATTTGATTGCACA+CGG 0.637118 3_2:-70657063 Msa0421630:CDS
GATGGCGAACACAGATCCCG+AGG 0.639336 3_2:-70661457 Msa0421630:CDS
TAAGTTTGGGGATTACCGCA+AGG 0.640681 3_2:-70657008 Msa0421630:CDS
GAAATCGCGTTGTAATGAGG+TGG 0.643805 3_2:+70661195 None:intergenic
GAAGCACTAATTGACCATCT+GGG 0.645330 3_2:+70657896 None:intergenic
TTATACAGGACTCATCATCA+TGG 0.645534 3_2:-70655412 Msa0421630:three_prime_UTR
TCAGAACCAACCAGAACACC+AGG 0.646048 3_2:-70656582 Msa0421630:intron
TAAAGATCTTGATAAAGATG+CGG 0.649605 3_2:-70659982 Msa0421630:CDS
GCCAGGAGACCCATTAAAGG+TGG 0.654293 3_2:-70660832 Msa0421630:CDS
CGCAGATTGAACATAAACTG+GGG 0.660034 3_2:+70656941 None:intergenic
CGAGCAGGTCGTTTGCCAGG+TGG 0.660104 3_2:+70660595 None:intergenic
AGATAGTGCTGTTAGCTCTG+AGG 0.662391 3_2:-70657845 Msa0421630:intron
ATGGCGGTATCAGCAACAGA+AGG 0.662506 3_2:+70658182 None:intergenic
CTGATACCGCCATAGGAGAG+GGG 0.664771 3_2:-70658172 Msa0421630:CDS
AAAGATCTAAAACATGACCC+TGG 0.670877 3_2:+70659901 None:intergenic
GGAGTAAGGGTTGAGAATGG+AGG 0.671591 3_2:+70661278 None:intergenic
GCAAAACAGCTGGTTAACCA+GGG 0.675809 3_2:-70659918 Msa0421630:CDS
CTTAGCGGTGAAATCAACGC+GGG 0.678250 3_2:+70661257 None:intergenic
ACGGATGAGGGAGATTGTGG+CGG 0.679027 3_2:+70661356 None:intergenic
GGAAGGAGGAGGATTAGGAT+CGG 0.693230 3_2:+70661107 None:intergenic
ATGGCGAACACAGATCCCGA+GGG 0.694002 3_2:-70661456 Msa0421630:CDS
ACAACAATATGGAAGATGTG+TGG 0.696066 3_2:-70658146 Msa0421630:CDS
AAGATGATGGATCATCCTTG+CGG 0.696117 3_2:+70656993 None:intergenic
GCAGATTGAACATAAACTGG+GGG 0.697137 3_2:+70656942 None:intergenic
AATCCCCAAACTTAGAACAG+AGG 0.701622 3_2:+70657017 None:intergenic
GATCGTTCAAATACTCCAGG+TGG 0.701854 3_2:-70658074 Msa0421630:CDS
GAGGATTCTACTTTGCTACG+TGG 0.707824 3_2:+70661399 None:intergenic
GCATTGCGGAAAGAAAGGAT+AGG 0.714453 3_2:-70655677 Msa0421630:three_prime_UTR
TTGGTAGTGTGTGATCAACA+CGG 0.729590 3_2:-70656258 Msa0421630:CDS
GTGAAATGAACACTGTTGTG+TGG 0.732784 3_2:-70655390 Msa0421630:three_prime_UTR
AGGGATATGATATTCAACGG+TGG 0.744253 3_2:+70661134 None:intergenic
AAACATTTGATTGCACACGG+TGG 0.751378 3_2:-70657060 Msa0421630:CDS
TTGCGAATACACTCTCAATG+CGG 0.783057 3_2:-70660737 Msa0421630:intron
TCTTAGCGGTGAAATCAACG+CGG 0.800179 3_2:+70661256 None:intergenic
ATTGAGGATAGAGTTCACCA+GGG 0.804613 3_2:+70661160 None:intergenic
GGGGTGCATAAGGAAGACTG+GGG 0.813434 3_2:+70661319 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATATGCTAAAAATTA+CGG - chr3_2:70659795-70659814 Msa0421630:intron 10.0%
!! ATAATTCATCAAAATCAAAT+CGG - chr3_2:70655482-70655501 Msa0421630:three_prime_UTR 15.0%
!! TTAAAATAATCCTAAACAAA+CGG - chr3_2:70657527-70657546 Msa0421630:intron 15.0%
!! AATTAATGTATCACAAAAAT+GGG + chr3_2:70657567-70657586 None:intergenic 15.0%
!! TAATTAATGTATCACAAAAA+TGG + chr3_2:70657568-70657587 None:intergenic 15.0%
!!! TCATGGTTATTTTATATTTT+AGG - chr3_2:70658110-70658129 Msa0421630:CDS 15.0%
!!! ATAATTTAAAACAAAAGTTG+TGG + chr3_2:70658499-70658518 None:intergenic 15.0%
!! TTCTTAAATTGATTAATAAC+AGG - chr3_2:70659463-70659482 Msa0421630:intron 15.0%
!! TTTAAGTAAAACACAAAATT+AGG - chr3_2:70659715-70659734 Msa0421630:intron 15.0%
!! AGAGATTAATTATCTCAAAT+CGG - chr3_2:70655954-70655973 Msa0421630:CDS 20.0%
!!! AATGTATGATTGATGATTTA+TGG - chr3_2:70656562-70656581 Msa0421630:intron 20.0%
!! AAGTATGAGAAAATTATAAG+TGG + chr3_2:70657149-70657168 None:intergenic 20.0%
!!! TAATTATTTCTCTTGTTAGT+TGG - chr3_2:70657172-70657191 Msa0421630:intron 20.0%
!! CAAAAATGGGATAAATTATA+AGG + chr3_2:70657554-70657573 None:intergenic 20.0%
!! CGTTGAATATATAAATTTAC+AGG + chr3_2:70657707-70657726 None:intergenic 20.0%
!! GTAAATTTATATATTCAACG+TGG - chr3_2:70657707-70657726 Msa0421630:intron 20.0%
!! AAAACATTTGTACTAAATAG+CGG + chr3_2:70657870-70657889 None:intergenic 20.0%
!! TGTTATTAAAAATATGCGAT+GGG + chr3_2:70657926-70657945 None:intergenic 20.0%
!!! TTGTTATTAAAAATATGCGA+TGG + chr3_2:70657927-70657946 None:intergenic 20.0%
!! ATTGAGTTTGAAAAACAATT+CGG - chr3_2:70658053-70658072 Msa0421630:CDS 20.0%
!!! GGTTATTTTATATTTTAGGT+TGG - chr3_2:70658114-70658133 Msa0421630:CDS 20.0%
!! GAAAAATAAGAAATAACAAC+AGG + chr3_2:70658360-70658379 None:intergenic 20.0%
!!! TATTTTTCAGTTATACTTGT+TGG - chr3_2:70658372-70658391 Msa0421630:CDS 20.0%
!!! ATTTTTCAGTTATACTTGTT+GGG - chr3_2:70658373-70658392 Msa0421630:CDS 20.0%
!!! AATAAATCTGAATGTGTTTT+AGG + chr3_2:70659640-70659659 None:intergenic 20.0%
!!! AAATGTAAAATTCAAGTTGT+TGG - chr3_2:70659825-70659844 Msa0421630:intron 20.0%
!!! ATGTATTTTATATGCATTTG+CGG - chr3_2:70659850-70659869 Msa0421630:intron 20.0%
!! TTATGGTGAAATATATTTAC+AGG - chr3_2:70660151-70660170 Msa0421630:intron 20.0%
!! AATGAATATGATATTAGTGA+TGG + chr3_2:70660263-70660282 None:intergenic 20.0%
!!! TTAACTTTAATTTATGGTAC+AGG - chr3_2:70660642-70660661 Msa0421630:intron 20.0%
!! TCCATAAAATAAAATTCAAC+AGG + chr3_2:70661266-70661285 None:intergenic 20.0%
!!! CATATTTTTCCTATTTGTTT+TGG - chr3_2:70661396-70661415 Msa0421630:CDS 20.0%
!! AACCCAAAAATTAAATATCT+GGG + chr3_2:70661422-70661441 None:intergenic 20.0%
! TGTTTAACATAATTGTGCAA+AGG - chr3_2:70655398-70655417 Msa0421630:three_prime_UTR 25.0%
! GTTTAACATAATTGTGCAAA+GGG - chr3_2:70655399-70655418 Msa0421630:three_prime_UTR 25.0%
!!! TCTAAAGTTTATGTTTTTCG+CGG - chr3_2:70656078-70656097 Msa0421630:intron 25.0%
! AAAGAAAATTAGTTAGCGTT+AGG - chr3_2:70656617-70656636 Msa0421630:CDS 25.0%
! TAAAATTGGAATAACTGGAA+GGG - chr3_2:70656846-70656865 Msa0421630:intron 25.0%
! TAAAGATCTTGATAAAGATG+CGG - chr3_2:70657015-70657034 Msa0421630:CDS 25.0%
!! TTTTAGGCTTACTTAAGTAT+AGG - chr3_2:70657624-70657643 Msa0421630:intron 25.0%
! TAATGTGTTTATGTTTCAGT+GGG - chr3_2:70658578-70658597 Msa0421630:intron 25.0%
! TCAAAGGAAATCAAAATTCA+GGG - chr3_2:70658619-70658638 Msa0421630:intron 25.0%
! TCTTTACAGAAAGATAGTTT+AGG + chr3_2:70659252-70659271 None:intergenic 25.0%
! CATGTTTATTCTCTAATGAT+TGG - chr3_2:70659408-70659427 Msa0421630:intron 25.0%
!! CTTACATTATTGTGTTATTC+AGG - chr3_2:70659496-70659515 Msa0421630:intron 25.0%
!! TTATTGTGTTATTCAGGAAT+TGG - chr3_2:70659502-70659521 Msa0421630:intron 25.0%
! GCAAATGCATATAAAATACA+TGG + chr3_2:70659851-70659870 None:intergenic 25.0%
! AATAAAATTGATGCTCAGTA+AGG + chr3_2:70659909-70659928 None:intergenic 25.0%
!!! AGCATCAATTTTATTTGATC+AGG - chr3_2:70659914-70659933 Msa0421630:CDS 25.0%
! GGATTTAATGTAAAAGATGA+TGG + chr3_2:70660020-70660039 None:intergenic 25.0%
!!! TTTAGTGTGGTTATTTTTCA+TGG - chr3_2:70660359-70660378 Msa0421630:intron 25.0%
!!! TTAGTGTGGTTATTTTTCAT+GGG - chr3_2:70660360-70660379 Msa0421630:intron 25.0%
! TAACAGCAATTTCTTTAGTA+GGG + chr3_2:70660457-70660476 None:intergenic 25.0%
!! CTGCTGTTAACTTTAATTTA+TGG - chr3_2:70660636-70660655 Msa0421630:intron 25.0%
! TAACAAAAGGGATGAAAATA+CGG + chr3_2:70660851-70660870 None:intergenic 25.0%
! TTATGAAAAATCTTGACTCA+AGG + chr3_2:70660876-70660895 None:intergenic 25.0%
!! GAGTCAAGATTTTTCATAAT+AGG - chr3_2:70660877-70660896 Msa0421630:CDS 25.0%
! TTCATAATAGGAAACTTACT+AGG - chr3_2:70660889-70660908 Msa0421630:CDS 25.0%
! TCATAATAGGAAACTTACTA+GGG - chr3_2:70660890-70660909 Msa0421630:CDS 25.0%
! AGTTTATGGATTCTATACTT+TGG - chr3_2:70661105-70661124 Msa0421630:CDS 25.0%
!!! GCCTGTTGAATTTTATTTTA+TGG - chr3_2:70661262-70661281 Msa0421630:CDS 25.0%
! GAACCCAAAAATTAAATATC+TGG + chr3_2:70661423-70661442 None:intergenic 25.0%
! TATGTAAATTAATCCAGATG+AGG + chr3_2:70661445-70661464 None:intergenic 25.0%
! ATCTGGATTAATTTACATAG+TGG - chr3_2:70661446-70661465 Msa0421630:CDS 25.0%
!! TCTGTCCATTTTGTTATCAA+CGG - chr3_2:70655770-70655789 Msa0421630:three_prime_UTR 30.0%
ATGAGGGATATGATATTCAA+CGG + chr3_2:70655869-70655888 None:intergenic 30.0%
! GATTTCCAAAGATCAGATTT+TGG - chr3_2:70656110-70656129 Msa0421630:intron 30.0%
TTGTTCCAAAATCTGATCTT+TGG + chr3_2:70656118-70656137 None:intergenic 30.0%
!!! AGATCAGATTTTGGAACAAT+TGG - chr3_2:70656119-70656138 Msa0421630:intron 30.0%
!!! GATCAGATTTTGGAACAATT+GGG - chr3_2:70656120-70656139 Msa0421630:intron 30.0%
!!! TATGCCTTGGATTTTGTTTT+CGG - chr3_2:70656592-70656611 Msa0421630:CDS 30.0%
!! TCATAGAAGTGTGTTTTTCT+TGG - chr3_2:70656792-70656811 Msa0421630:CDS 30.0%
!! AAAGTGTTGTGTGGTAAAAT+TGG - chr3_2:70656832-70656851 Msa0421630:intron 30.0%
TGTGGTAAAATTGGAATAAC+TGG - chr3_2:70656841-70656860 Msa0421630:intron 30.0%
GTAAAATTGGAATAACTGGA+AGG - chr3_2:70656845-70656864 Msa0421630:intron 30.0%
TTCACTGCTTTCTTAAAGTA+AGG + chr3_2:70657043-70657062 None:intergenic 30.0%
!! AAAGCAGTGAAGTTTTATGA+GGG - chr3_2:70657052-70657071 Msa0421630:CDS 30.0%
TTTCTCTTGTTAGTTGGATA+TGG - chr3_2:70657178-70657197 Msa0421630:intron 30.0%
! TTTTCAGAAAAACAGAAGCA+TGG + chr3_2:70657369-70657388 None:intergenic 30.0%
ATTATAAGGTCCGTTTGTTT+AGG + chr3_2:70657540-70657559 None:intergenic 30.0%
AAGGAATGTTATGGATAACA+TGG + chr3_2:70657594-70657613 None:intergenic 30.0%
GTTATCCATAACATTCCTTA+CGG - chr3_2:70657595-70657614 Msa0421630:intron 30.0%
TTATCCATAACATTCCTTAC+GGG - chr3_2:70657596-70657615 Msa0421630:intron 30.0%
ATGTTGTTAAATAGCAGCTA+TGG - chr3_2:70657787-70657806 Msa0421630:intron 30.0%
! TTTTCATATAGCTGCTATAG+TGG - chr3_2:70657886-70657905 Msa0421630:CDS 30.0%
TTCAATGATGTTGTCAATCT+CGG + chr3_2:70657958-70657977 None:intergenic 30.0%
!!! ATGATGCTTCTTTTTTCTCA+AGG - chr3_2:70658455-70658474 Msa0421630:intron 30.0%
TCTCTGATAAACGATATGTA+GGG + chr3_2:70658548-70658567 None:intergenic 30.0%
CTAATGTGTTTATGTTTCAG+TGG - chr3_2:70658577-70658596 Msa0421630:intron 30.0%
CTTTGAGCAATTTATCTCAA+GGG + chr3_2:70658605-70658624 None:intergenic 30.0%
CTCAAAGGAAATCAAAATTC+AGG - chr3_2:70658618-70658637 Msa0421630:intron 30.0%
ATCAAAATTCAGGGAATTGT+TGG - chr3_2:70658628-70658647 Msa0421630:intron 30.0%
TCTTGAATTAGAGATTGTGT+TGG - chr3_2:70658720-70658739 Msa0421630:intron 30.0%
! GTTGGGCAAATTTTGTAAAT+AGG - chr3_2:70658987-70659006 Msa0421630:intron 30.0%
TGTCTTTCCACTATTTCATT+GGG - chr3_2:70659033-70659052 Msa0421630:intron 30.0%
TTGAGCATTAATAATGGTCA+TGG - chr3_2:70659058-70659077 Msa0421630:intron 30.0%
GTCGATGTGATAGAAATATT+TGG - chr3_2:70659222-70659241 Msa0421630:intron 30.0%
AGAGAATAAACATGTCATTC+AGG + chr3_2:70659402-70659421 None:intergenic 30.0%
! TAGATATGCTTCTCTGAAAA+TGG - chr3_2:70659565-70659584 Msa0421630:intron 30.0%
GAGAACAAAAGATAGTAAGA+CGG + chr3_2:70659611-70659630 None:intergenic 30.0%
TCAACAAATATATACTTCCC+AGG + chr3_2:70659676-70659695 None:intergenic 30.0%
TTTGTTGAAATGAATGCTAG+TGG - chr3_2:70659688-70659707 Msa0421630:intron 30.0%
TTGTTGAAATGAATGCTAGT+GGG - chr3_2:70659689-70659708 Msa0421630:intron 30.0%
!! GTGAATAGCTTTGATATTGA+TGG - chr3_2:70659737-70659756 Msa0421630:intron 30.0%
AGGAAGAAAACAACAATAAC+AGG + chr3_2:70660104-70660123 None:intergenic 30.0%
CCATAAATCAGCTAACTATT+AGG + chr3_2:70660137-70660156 None:intergenic 30.0%
! CCTAATAGTTAGCTGATTTA+TGG - chr3_2:70660134-70660153 Msa0421630:intron 30.0%
! CCGCATTATTAATATTTTCC+CGG + chr3_2:70660226-70660245 None:intergenic 30.0%
CCGGGAAAATATTAATAATG+CGG - chr3_2:70660223-70660242 Msa0421630:intron 30.0%
!!! GCTAGATTCATATTTTAGTG+TGG - chr3_2:70660346-70660365 Msa0421630:intron 30.0%
GTAACAGCAATTTCTTTAGT+AGG + chr3_2:70660458-70660477 None:intergenic 30.0%
!!! GTTTCTTTCTGTTAGTTTTG+TGG - chr3_2:70660541-70660560 Msa0421630:CDS 30.0%
GCTCATGGTATGAATAATTT+GGG + chr3_2:70660789-70660808 None:intergenic 30.0%
TGCTCATGGTATGAATAATT+TGG + chr3_2:70660790-70660809 None:intergenic 30.0%
TGACTCAAGGATTAACAAAA+GGG + chr3_2:70660863-70660882 None:intergenic 30.0%
TTGACTCAAGGATTAACAAA+AGG + chr3_2:70660864-70660883 None:intergenic 30.0%
GTTTCATTGATGTCTTTAAC+AGG - chr3_2:70660912-70660931 Msa0421630:CDS 30.0%
GCATTATTATATGTTGCTGA+CGG + chr3_2:70660964-70660983 None:intergenic 30.0%
ATGGATTCTATACTTTGGTT+TGG - chr3_2:70661110-70661129 Msa0421630:CDS 30.0%
! TGGATTCTATACTTTGGTTT+GGG - chr3_2:70661111-70661130 Msa0421630:CDS 30.0%
GTTAAGAACAAAGGAAAGAA+AGG + chr3_2:70661192-70661211 None:intergenic 30.0%
TCTTATTCTTCAATACATGC+AGG + chr3_2:70661233-70661252 None:intergenic 30.0%
ATTGAAGAATAAGAGAAGCA+AGG - chr3_2:70661239-70661258 Msa0421630:CDS 30.0%
TTGAAGAATAAGAGAAGCAA+GGG - chr3_2:70661240-70661259 Msa0421630:CDS 30.0%
ATTCATATGTACGTTGAGTT+TGG - chr3_2:70661297-70661316 Msa0421630:CDS 30.0%
TTCATATGTACGTTGAGTTT+GGG - chr3_2:70661298-70661317 Msa0421630:CDS 30.0%
!! TGGCCCAGATATTTAATTTT+TGG - chr3_2:70661416-70661435 Msa0421630:CDS 30.0%
!! GGCCCAGATATTTAATTTTT+GGG - chr3_2:70661417-70661436 Msa0421630:CDS 30.0%
!! TTTACTTTTACATACTCGCT+AGG - chr3_2:70661470-70661489 Msa0421630:exon 30.0%
TTTGTGAAGTAAGCTTATAC+AGG - chr3_2:70661571-70661590 Msa0421630:five_prime_UTR 30.0%
! TGATGATGATGATGATGCAA+AGG + chr3_2:70655454-70655473 None:intergenic 35.0%
ATCATCATCATCAACGATGT+CGG - chr3_2:70655516-70655535 Msa0421630:three_prime_UTR 35.0%
!! TGGTTCCGTTGATAACAAAA+TGG + chr3_2:70655778-70655797 None:intergenic 35.0%
AAGCAGAAAGAGAAAAACAG+GGG + chr3_2:70655914-70655933 None:intergenic 35.0%
CAAGCAGAAAGAGAAAAACA+GGG + chr3_2:70655915-70655934 None:intergenic 35.0%
TCAAGCAGAAAGAGAAAAAC+AGG + chr3_2:70655916-70655935 None:intergenic 35.0%
! AATTATCTCAAATCGGCTCT+TGG - chr3_2:70655961-70655980 Msa0421630:CDS 35.0%
! TTACCTGATAATGCTCTTGT+TGG - chr3_2:70656000-70656019 Msa0421630:CDS 35.0%
! TACCTGATAATGCTCTTGTT+GGG - chr3_2:70656001-70656020 Msa0421630:CDS 35.0%
! CTTGTTGGGTTTTTATCCTT+CGG - chr3_2:70656015-70656034 Msa0421630:CDS 35.0%
! TTGTTGGGTTTTTATCCTTC+GGG - chr3_2:70656016-70656035 Msa0421630:CDS 35.0%
! CTGATCTTTGGAAATCTCTT+TGG + chr3_2:70656106-70656125 None:intergenic 35.0%
CAACAAAAATCGTGAAACAC+CGG + chr3_2:70656229-70656248 None:intergenic 35.0%
!!! GTGATTGTTTTTTCAGCTGT+TGG - chr3_2:70656350-70656369 Msa0421630:intron 35.0%
!!! ATTGTTTTTTCAGCTGTTGG+AGG - chr3_2:70656353-70656372 Msa0421630:intron 35.0%
!! GCTAGAATTATAGCTTTGGT+TGG - chr3_2:70656489-70656508 Msa0421630:intron 35.0%
!! AGAATTATAGCTTTGGTTGG+AGG - chr3_2:70656492-70656511 Msa0421630:intron 35.0%
!! GAATTATAGCTTTGGTTGGA+GGG - chr3_2:70656493-70656512 Msa0421630:intron 35.0%
TTCACCGAAAACAAAATCCA+AGG + chr3_2:70656599-70656618 None:intergenic 35.0%
!! GAATGATTTGTTAGGCGTAT+TGG - chr3_2:70656682-70656701 Msa0421630:CDS 35.0%
TCGAAGTTTCATAGTCATGT+TGG - chr3_2:70656707-70656726 Msa0421630:CDS 35.0%
! GAAGTGTGTTTTTCTTGGTT+TGG - chr3_2:70656797-70656816 Msa0421630:CDS 35.0%
!! TGAAAGTTCAAAGTGTTGTG+TGG - chr3_2:70656823-70656842 Msa0421630:CDS 35.0%
!! GAAAGCAGTGAAGTTTTATG+AGG - chr3_2:70657051-70657070 Msa0421630:CDS 35.0%
! AAAGATCTAAAACATGACCC+TGG + chr3_2:70657099-70657118 None:intergenic 35.0%
TTTGGAAAAATTGAGCTGCA+TGG + chr3_2:70657292-70657311 None:intergenic 35.0%
TTTCCAAACTCCACATTAGA+AGG - chr3_2:70657304-70657323 Msa0421630:intron 35.0%
! TAAACAGTTTTGCATGCACT+TGG - chr3_2:70657398-70657417 Msa0421630:intron 35.0%
! TTCCTTACGGGAAAGTTTTT+AGG - chr3_2:70657608-70657627 Msa0421630:intron 35.0%
TTGTTAAATAGCAGCTATGG+CGG - chr3_2:70657790-70657809 Msa0421630:intron 35.0%
! TTGGATGAACCGTTGTTATT+CGG - chr3_2:70657840-70657859 Msa0421630:intron 35.0%
!!! CTTTGTTTTGTGCTGATTCA+TGG - chr3_2:70658093-70658112 Msa0421630:CDS 35.0%
AATGACCAAAACTTTCAGAC+AGG + chr3_2:70658188-70658207 None:intergenic 35.0%
! TTTTGGTCATTCAGTCTTCA+AGG - chr3_2:70658197-70658216 Msa0421630:intron 35.0%
!! CTCTTTTAAGCGTGTTTTTG+AGG - chr3_2:70658221-70658240 Msa0421630:intron 35.0%
!! TTTAAGCGTGTTTTTGAGGA+TGG - chr3_2:70658225-70658244 Msa0421630:intron 35.0%
!! TTAAGCGTGTTTTTGAGGAT+GGG - chr3_2:70658226-70658245 Msa0421630:intron 35.0%
ATAAGAAATAACAACAGGCG+AGG + chr3_2:70658355-70658374 None:intergenic 35.0%
GTCTCTGATAAACGATATGT+AGG + chr3_2:70658549-70658568 None:intergenic 35.0%
CCTTTGAGCAATTTATCTCA+AGG + chr3_2:70658606-70658625 None:intergenic 35.0%
CCTTGAGATAAATTGCTCAA+AGG - chr3_2:70658603-70658622 Msa0421630:intron 35.0%
TTTACTCACATACTGCAGAA+AGG - chr3_2:70658791-70658810 Msa0421630:CDS 35.0%
ACAACAATATGGAAGATGTG+TGG - chr3_2:70658851-70658870 Msa0421630:CDS 35.0%
AGTTCCTTACAAGGTTATGT+TGG - chr3_2:70658969-70658988 Msa0421630:intron 35.0%
GTTCCTTACAAGGTTATGTT+GGG - chr3_2:70658970-70658989 Msa0421630:intron 35.0%
GTGTCTTTCCACTATTTCAT+TGG - chr3_2:70659032-70659051 Msa0421630:intron 35.0%
TGGGTCTTGAGCATTAATAA+TGG - chr3_2:70659052-70659071 Msa0421630:intron 35.0%
GACAACAGTAACTAGAAGAT+GGG - chr3_2:70659128-70659147 Msa0421630:intron 35.0%
!!! TCCAGTCTTTTTTATGTCTG+TGG - chr3_2:70659179-70659198 Msa0421630:intron 35.0%
AGCTATGTCATGCAGAATTT+CGG - chr3_2:70659319-70659338 Msa0421630:intron 35.0%
TGTTGAAATGAATGCTAGTG+GGG - chr3_2:70659690-70659709 Msa0421630:intron 35.0%
AGGAAACATTTGATTGCACA+CGG - chr3_2:70659934-70659953 Msa0421630:CDS 35.0%
TCGCAGATTGAACATAAACT+GGG + chr3_2:70660060-70660079 None:intergenic 35.0%
ACTTTCGCATGTTGTTAAAC+CGG - chr3_2:70660204-70660223 Msa0421630:intron 35.0%
ATGAATCTAGCAACAGAATC+CGG + chr3_2:70660337-70660356 None:intergenic 35.0%
AATTTGTGAGCAGAATTCTC+AGG + chr3_2:70660480-70660499 None:intergenic 35.0%
!!! CTTTCTGTTAGTTTTGTGGA+CGG - chr3_2:70660545-70660564 Msa0421630:CDS 35.0%
CCGATCTCTAATTATTGCTT+GGG + chr3_2:70660704-70660723 None:intergenic 35.0%
CCCAAGCAATAATTAGAGAT+CGG - chr3_2:70660701-70660720 Msa0421630:intron 35.0%
ACCGATCTCTAATTATTGCT+TGG + chr3_2:70660705-70660724 None:intergenic 35.0%
GTAAGAAACAATACTGACCT+GGG + chr3_2:70660767-70660786 None:intergenic 35.0%
ATACTCATCAGTATTGCTCA+TGG + chr3_2:70660804-70660823 None:intergenic 35.0%
ATATAATAATGCGCACGAGA+TGG - chr3_2:70660972-70660991 Msa0421630:CDS 35.0%
GATGCTCAAAGAAAACTTGA+AGG + chr3_2:70661035-70661054 None:intergenic 35.0%
! TTTTCTTTGAGCATCTGCAA+AGG - chr3_2:70661040-70661059 Msa0421630:CDS 35.0%
!! GGATTCTATACTTTGGTTTG+GGG - chr3_2:70661112-70661131 Msa0421630:CDS 35.0%
CTTCTCTCTGTTAAGAACAA+AGG + chr3_2:70661201-70661220 None:intergenic 35.0%
ATATCTGGGCCAAAACAAAT+AGG + chr3_2:70661408-70661427 None:intergenic 35.0%
!!! TAATTTTTGGGTTCCTCATC+TGG - chr3_2:70661429-70661448 Msa0421630:CDS 35.0%
! AAGACATTTTGTCATGTCGT+TGG - chr3_2:70661502-70661521 Msa0421630:five_prime_UTR 35.0%
TTATACAGGACTCATCATCA+TGG - chr3_2:70661585-70661604 Msa0421630:five_prime_UTR 35.0%
ATAAGGAAGACTGGGGATAT+CGG + chr3_2:70655674-70655693 None:intergenic 40.0%
TTGATTTCACCGCTAAGATC+TGG - chr3_2:70655746-70655765 Msa0421630:three_prime_UTR 40.0%
CGTTGTAATGAGGTGGAAAA+TGG + chr3_2:70655798-70655817 None:intergenic 40.0%
TCAGAAATCGCGTTGTAATG+AGG + chr3_2:70655808-70655827 None:intergenic 40.0%
!! ATTTCTGAAACTCATCTCCC+TGG - chr3_2:70655820-70655839 Msa0421630:three_prime_UTR 40.0%
ATTGAGGATAGAGTTCACCA+GGG + chr3_2:70655840-70655859 None:intergenic 40.0%
TATTGAGGATAGAGTTCACC+AGG + chr3_2:70655841-70655860 None:intergenic 40.0%
TATTCAACGGTGGTGTATTG+AGG + chr3_2:70655856-70655875 None:intergenic 40.0%
AGGGATATGATATTCAACGG+TGG + chr3_2:70655866-70655885 None:intergenic 40.0%
AGAAAGAGAAAAACAGGGGA+AGG + chr3_2:70655910-70655929 None:intergenic 40.0%
!! AACCCAACAAGAGCATTATC+AGG + chr3_2:70656006-70656025 None:intergenic 40.0%
! TCAGGTTCAGGTTCATGAAT+TGG - chr3_2:70656041-70656060 Msa0421630:CDS 40.0%
! CAGGTTCAGGTTCATGAATT+GGG - chr3_2:70656042-70656061 Msa0421630:CDS 40.0%
AATCGTGAAACACCGGAATT+GGG + chr3_2:70656222-70656241 None:intergenic 40.0%
AAATCGTGAAACACCGGAAT+TGG + chr3_2:70656223-70656242 None:intergenic 40.0%
TTGCGAATACACTCTCAATG+CGG - chr3_2:70656260-70656279 Msa0421630:CDS 40.0%
AGGAATTGCAGAGAGATCAA+TGG - chr3_2:70656373-70656392 Msa0421630:intron 40.0%
TGGGGCTAGAATTATAGCTT+TGG - chr3_2:70656485-70656504 Msa0421630:intron 40.0%
!! TTATGGCTGTTTCTATGCCT+TGG - chr3_2:70656579-70656598 Msa0421630:intron 40.0%
!! TACGAGCGGAATGATTTGTT+AGG - chr3_2:70656674-70656693 Msa0421630:CDS 40.0%
GAATAACTGGAAGGGAACTT+TGG - chr3_2:70656854-70656873 Msa0421630:intron 40.0%
CATCAGAGATATTCTGTGGA+TGG + chr3_2:70656926-70656945 None:intergenic 40.0%
TCGACATCAGAGATATTCTG+TGG + chr3_2:70656930-70656949 None:intergenic 40.0%
GATCTTTATGAGAACGCACT+GGG + chr3_2:70657003-70657022 None:intergenic 40.0%
AGATCTTTATGAGAACGCAC+TGG + chr3_2:70657004-70657023 None:intergenic 40.0%
! TTTTGCATCAGCACTTGATC+AGG - chr3_2:70657117-70657136 Msa0421630:intron 40.0%
ATGCCTTCTAATGTGGAGTT+TGG + chr3_2:70657310-70657329 None:intergenic 40.0%
GGATTAGATGCCTTCTAATG+TGG + chr3_2:70657317-70657336 None:intergenic 40.0%
CTTTCCCGTAAGGAATGTTA+TGG + chr3_2:70657603-70657622 None:intergenic 40.0%
AGCCTAAAAACTTTCCCGTA+AGG + chr3_2:70657613-70657632 None:intergenic 40.0%
! TACCTTTGTTTCTCCCTAAC+CGG - chr3_2:70657663-70657682 Msa0421630:intron 40.0%
ACGTGGTTAATACATCCATC+TGG - chr3_2:70657724-70657743 Msa0421630:intron 40.0%
CGTGGTTAATACATCCATCT+GGG - chr3_2:70657725-70657744 Msa0421630:intron 40.0%
TGCTATAGCGTAGCAGAATT+TGG - chr3_2:70657821-70657840 Msa0421630:intron 40.0%
TGTTGTCAATCTCGGATAGT+GGG + chr3_2:70657950-70657969 None:intergenic 40.0%
ATGTTGTCAATCTCGGATAG+TGG + chr3_2:70657951-70657970 None:intergenic 40.0%
AAAGTCGCAGTTGAAAGAAC+TGG - chr3_2:70658150-70658169 Msa0421630:CDS 40.0%
AACTTTCAGACAGGACAACA+AGG + chr3_2:70658179-70658198 None:intergenic 40.0%
! GTTGTCCTGTCTGAAAGTTT+TGG - chr3_2:70658180-70658199 Msa0421630:CDS 40.0%
!! TAAGCGTGTTTTTGAGGATG+GGG - chr3_2:70658227-70658246 Msa0421630:intron 40.0%
AACTATGTTGGCATCTCACT+TGG + chr3_2:70658417-70658436 None:intergenic 40.0%
AAGTGAGATGCCAACATAGT+TGG - chr3_2:70658416-70658435 Msa0421630:intron 40.0%
AGTGAGATGCCAACATAGTT+GGG - chr3_2:70658417-70658436 Msa0421630:intron 40.0%
GAATCAGAGCATGATATGTC+TGG - chr3_2:70658759-70658778 Msa0421630:CDS 40.0%
AGTGATCGTTCAAATACTCC+AGG - chr3_2:70658920-70658939 Msa0421630:intron 40.0%
ATAACCTTGTAAGGAACTGC+AGG + chr3_2:70658967-70658986 None:intergenic 40.0%
TTGCCCAACATAACCTTGTA+AGG + chr3_2:70658976-70658995 None:intergenic 40.0%
CTCAAGACCCAATGAAATAG+TGG + chr3_2:70659043-70659062 None:intergenic 40.0%
!! ATGGTCTTATTGCAGTTACC+AGG - chr3_2:70659077-70659096 Msa0421630:intron 40.0%
!! TGGTCTTATTGCAGTTACCA+GGG - chr3_2:70659078-70659097 Msa0421630:intron 40.0%
! GAAGCACTAATTGACCATCT+GGG + chr3_2:70659104-70659123 None:intergenic 40.0%
CGACAACAGTAACTAGAAGA+TGG - chr3_2:70659127-70659146 Msa0421630:intron 40.0%
GCCACAGACATAAAAAAGAC+TGG + chr3_2:70659183-70659202 None:intergenic 40.0%
!!! CTTTTTTATGTCTGTGGCTG+TGG - chr3_2:70659185-70659204 Msa0421630:intron 40.0%
! GTTATTCAGGAATTGGCTCA+AGG - chr3_2:70659509-70659528 Msa0421630:intron 40.0%
TTACAACTGCAGCAGTTTCT+TGG + chr3_2:70659541-70659560 None:intergenic 40.0%
AGAAACTGCTGCAGTTGTAA+TGG - chr3_2:70659541-70659560 Msa0421630:intron 40.0%
! TTCTCTGAAAATGGAGACAG+AGG - chr3_2:70659574-70659593 Msa0421630:intron 40.0%
TTATTTACTCAAGCAGCTCC+TGG - chr3_2:70659655-70659674 Msa0421630:intron 40.0%
TATTTACTCAAGCAGCTCCT+GGG - chr3_2:70659656-70659675 Msa0421630:intron 40.0%
AAACATTTGATTGCACACGG+TGG - chr3_2:70659937-70659956 Msa0421630:CDS 40.0%
! ATTCGCCTCTGTTCTAAGTT+TGG - chr3_2:70659975-70659994 Msa0421630:CDS 40.0%
! TTCGCCTCTGTTCTAAGTTT+GGG - chr3_2:70659976-70659995 Msa0421630:CDS 40.0%
AATCCCCAAACTTAGAACAG+AGG + chr3_2:70659983-70660002 None:intergenic 40.0%
!! AAGATGATGGATCATCCTTG+CGG + chr3_2:70660007-70660026 None:intergenic 40.0%
TGGGGGAAAAGAGAAAATGA+TGG + chr3_2:70660041-70660060 None:intergenic 40.0%
GCAGATTGAACATAAACTGG+GGG + chr3_2:70660058-70660077 None:intergenic 40.0%
CGCAGATTGAACATAAACTG+GGG + chr3_2:70660059-70660078 None:intergenic 40.0%
GTCGCAGATTGAACATAAAC+TGG + chr3_2:70660061-70660080 None:intergenic 40.0%
AACTATTAGGACTGCAGAAC+AGG + chr3_2:70660124-70660143 None:intergenic 40.0%
CTTTCGCATGTTGTTAAACC+GGG - chr3_2:70660205-70660224 Msa0421630:intron 40.0%
ATGGGATGACAATAGCTCAA+TGG - chr3_2:70660378-70660397 Msa0421630:intron 40.0%
!!! CTTAGAGGCATTTTCGTAGT+TGG - chr3_2:70660575-70660594 Msa0421630:CDS 40.0%
CAGAGAGAGAAAAGGAATAC+TGG + chr3_2:70660619-70660638 None:intergenic 40.0%
GTTAACAGCAGAGAGAGAAA+AGG + chr3_2:70660627-70660646 None:intergenic 40.0%
ATTGCTTGGGAATCATCTTG+TGG + chr3_2:70660691-70660710 None:intergenic 40.0%
TGATCACACACTACCAATCT+AGG + chr3_2:70660736-70660755 None:intergenic 40.0%
!! TTGGTAGTGTGTGATCAACA+CGG - chr3_2:70660739-70660758 Msa0421630:CDS 40.0%
GGTAAGAAACAATACTGACC+TGG + chr3_2:70660768-70660787 None:intergenic 40.0%
TAGAGGAGACTGACAGTTTA+TGG - chr3_2:70661091-70661110 Msa0421630:CDS 40.0%
TGAATGCAACAGCATAATGC+AGG + chr3_2:70661160-70661179 None:intergenic 40.0%
TACAGCAGCATAGCAAATGA+GGG - chr3_2:70661359-70661378 Msa0421630:CDS 40.0%
GTGAAATGAACACTGTTGTG+TGG - chr3_2:70661607-70661626 Msa0421630:five_prime_UTR 40.0%
ATCATCAACGATGTCGGAGA+TGG - chr3_2:70655522-70655541 Msa0421630:three_prime_UTR 45.0%
GAGGATTCTACTTTGCTACG+TGG + chr3_2:70655601-70655620 None:intergenic 45.0%
TAAGGAAGACTGGGGATATC+GGG + chr3_2:70655673-70655692 None:intergenic 45.0%
TGAAATCAACGCGGGAGTAA+GGG + chr3_2:70655735-70655754 None:intergenic 45.0%
TCTTAGCGGTGAAATCAACG+CGG + chr3_2:70655744-70655763 None:intergenic 45.0%
TGGACAGATCCAGATCTTAG+CGG + chr3_2:70655758-70655777 None:intergenic 45.0%
GAAATCGCGTTGTAATGAGG+TGG + chr3_2:70655805-70655824 None:intergenic 45.0%
GAGGATTAGGATCGGTATGA+GGG + chr3_2:70655885-70655904 None:intergenic 45.0%
AAGAGAAAAACAGGGGAAGG+AGG + chr3_2:70655907-70655926 None:intergenic 45.0%
! GTTTTTATCCTTCGGGACTC+AGG - chr3_2:70656023-70656042 Msa0421630:CDS 45.0%
CTTCTTCTAATTCTGCTGCC+AGG - chr3_2:70656148-70656167 Msa0421630:intron 45.0%
GAAACACCGGAATTGGGAAA+AGG + chr3_2:70656216-70656235 None:intergenic 45.0%
GTGTATTCGCAATCAGAAGC+AGG + chr3_2:70656252-70656271 None:intergenic 45.0%
TGCAACACTCAATGCAACTC+CGG + chr3_2:70656433-70656452 None:intergenic 45.0%
TTGCTCAGTGCTTGTAATCC+TGG - chr3_2:70656459-70656478 Msa0421630:intron 45.0%
TGCTCAGTGCTTGTAATCCT+GGG - chr3_2:70656460-70656479 Msa0421630:intron 45.0%
ACAAACTGATATACCGTGCC+AGG + chr3_2:70656534-70656553 None:intergenic 45.0%
TCGAGCTGAATCATTACGAG+CGG - chr3_2:70656660-70656679 Msa0421630:CDS 45.0%
TGCAAAACAGCTGGTTAACC+AGG - chr3_2:70657078-70657097 Msa0421630:intron 45.0%
GCAAAACAGCTGGTTAACCA+GGG - chr3_2:70657079-70657098 Msa0421630:intron 45.0%
ATCAGATACAGTGCTCGCTA+AGG - chr3_2:70657216-70657235 Msa0421630:intron 45.0%
AATCCAGCATTTCTGCTGAG+TGG - chr3_2:70657332-70657351 Msa0421630:intron 45.0%
AAACCACTCAGCAGAAATGC+TGG + chr3_2:70657338-70657357 None:intergenic 45.0%
CATCTGGGTGTTCGTATTGA+CGG - chr3_2:70657740-70657759 Msa0421630:intron 45.0%
! GTGTTCGTATTGACGGCATT+GGG - chr3_2:70657747-70657766 Msa0421630:intron 45.0%
AGCGGATCACCGAATAACAA+CGG + chr3_2:70657852-70657871 None:intergenic 45.0%
AGAAATAACAACAGGCGAGG+AGG + chr3_2:70658352-70658371 None:intergenic 45.0%
AAGAGACGTCCCAACTATGT+TGG + chr3_2:70658429-70658448 None:intergenic 45.0%
AACATAGTTGGGACGTCTCT+TGG - chr3_2:70658428-70658447 Msa0421630:intron 45.0%
TGTAGGGAGAACAAGAGACA+AGG + chr3_2:70658532-70658551 None:intergenic 45.0%
GAGAGGGGAACACAACAATA+TGG - chr3_2:70658840-70658859 Msa0421630:CDS 45.0%
GATCGTTCAAATACTCCAGG+TGG - chr3_2:70658923-70658942 Msa0421630:intron 45.0%
TGTACCTGCAGTTCCTTACA+AGG - chr3_2:70658960-70658979 Msa0421630:intron 45.0%
! CGAAGCACTAATTGACCATC+TGG + chr3_2:70659105-70659124 None:intergenic 45.0%
!! AGATAGTGCTGTTAGCTCTG+AGG - chr3_2:70659152-70659171 Msa0421630:intron 45.0%
TTTATGTCTGTGGCTGTGGA+TGG - chr3_2:70659189-70659208 Msa0421630:intron 45.0%
ATTTGATTGCACACGGTGGT+TGG - chr3_2:70659941-70659960 Msa0421630:CDS 45.0%
ACTTAGAACAGAGGCGAATG+AGG + chr3_2:70659974-70659993 None:intergenic 45.0%
! TCGCCTCTGTTCTAAGTTTG+GGG - chr3_2:70659977-70659996 Msa0421630:CDS 45.0%
TAAGTTTGGGGATTACCGCA+AGG - chr3_2:70659989-70660008 Msa0421630:CDS 45.0%
! CGAAAGTATGCAGTCTCATC+TGG + chr3_2:70660191-70660210 None:intergenic 45.0%
AATAGCTCAATGGCGCAACT+TGG - chr3_2:70660388-70660407 Msa0421630:intron 45.0%
ATAGCTCAATGGCGCAACTT+GGG - chr3_2:70660389-70660408 Msa0421630:intron 45.0%
TCGGTTTCCTGTTCCTAGAT+TGG - chr3_2:70660720-70660739 Msa0421630:intron 45.0%
CACACTACCAATCTAGGAAC+AGG + chr3_2:70660730-70660749 None:intergenic 45.0%
CTATCATCTGCCCTCAAGAT+TGG + chr3_2:70661074-70661093 None:intergenic 45.0%
ATCTTGAGGGCAGATGATAG+AGG - chr3_2:70661074-70661093 Msa0421630:CDS 45.0%
ATGCAGGACACACACATCAT+TGG + chr3_2:70661144-70661163 None:intergenic 45.0%
! TACGTTGAGTTTGGGCATTG+CGG - chr3_2:70661306-70661325 Msa0421630:CDS 45.0%
! TTTGGGCATTGCGGAAAGAA+AGG - chr3_2:70661315-70661334 Msa0421630:CDS 45.0%
GCATTGCGGAAAGAAAGGAT+AGG - chr3_2:70661320-70661339 Msa0421630:CDS 45.0%
CTACAGCAGCATAGCAAATG+AGG - chr3_2:70661358-70661377 Msa0421630:CDS 45.0%
!! AAAAAACATATATATATATA+TGG + chr3_2:70657475-70657494 None:intergenic 5.0%
TCCGTATGACATGGAACGTC+TGG - chr3_2:70655575-70655594 Msa0421630:three_prime_UTR 50.0%
GCCAGACGTTCCATGTCATA+CGG + chr3_2:70655579-70655598 None:intergenic 50.0%
GAGTGGGATAACGCATTTGG+AGG + chr3_2:70655620-70655639 None:intergenic 50.0%
AGAACGGATGAGGGAGATTG+TGG + chr3_2:70655647-70655666 None:intergenic 50.0%
ATCGGGATGAGAACGGATGA+GGG + chr3_2:70655656-70655675 None:intergenic 50.0%
TATCGGGATGAGAACGGATG+AGG + chr3_2:70655657-70655676 None:intergenic 50.0%
TGGGGATATCGGGATGAGAA+CGG + chr3_2:70655663-70655682 None:intergenic 50.0%
! AGGGGTGCATAAGGAAGACT+GGG + chr3_2:70655682-70655701 None:intergenic 50.0%
!! TGGAGGTGCAGGTTTTGCAA+CGG + chr3_2:70655705-70655724 None:intergenic 50.0%
GGAGTAAGGGTTGAGAATGG+AGG + chr3_2:70655722-70655741 None:intergenic 50.0%
GTGAAATCAACGCGGGAGTA+AGG + chr3_2:70655736-70655755 None:intergenic 50.0%
CTTAGCGGTGAAATCAACGC+GGG + chr3_2:70655743-70655762 None:intergenic 50.0%
GGAGGATTAGGATCGGTATG+AGG + chr3_2:70655886-70655905 None:intergenic 50.0%
GGAAGGAGGAGGATTAGGAT+CGG + chr3_2:70655893-70655912 None:intergenic 50.0%
AGAAAAACAGGGGAAGGAGG+AGG + chr3_2:70655904-70655923 None:intergenic 50.0%
TCGGCTCTTGGTAGAGCAAT+TGG - chr3_2:70655973-70655992 Msa0421630:CDS 50.0%
CGGCTCTTGGTAGAGCAATT+GGG - chr3_2:70655974-70655993 Msa0421630:CDS 50.0%
! ACCACCTTTAATGGGTCTCC+TGG + chr3_2:70656169-70656188 None:intergenic 50.0%
AGACCCATTAAAGGTGGTCC+TGG - chr3_2:70656171-70656190 Msa0421630:intron 50.0%
! GGTGCTCCTTTTCCCAATTC+CGG - chr3_2:70656207-70656226 Msa0421630:intron 50.0%
AAACGACCTGCTCGATGTAC+CGG - chr3_2:70656411-70656430 Msa0421630:intron 50.0%
! GTTGCATTGAGTGTTGCAGC+TGG - chr3_2:70656435-70656454 Msa0421630:intron 50.0%
AGTGCTTGTAATCCTGGGAC+TGG - chr3_2:70656465-70656484 Msa0421630:intron 50.0%
GTGCTTGTAATCCTGGGACT+GGG - chr3_2:70656466-70656485 Msa0421630:intron 50.0%
TGCTTGTAATCCTGGGACTG+GGG - chr3_2:70656467-70656486 Msa0421630:intron 50.0%
ATAATTCTAGCCCCAGTCCC+AGG + chr3_2:70656480-70656499 None:intergenic 50.0%
TGAGGGTCTTGCAAAACAGC+TGG - chr3_2:70657069-70657088 Msa0421630:intron 50.0%
! TGCCGGTTAGGGAGAAACAA+AGG + chr3_2:70657668-70657687 None:intergenic 50.0%
! TAGCCAAGCATTGCCGGTTA+GGG + chr3_2:70657679-70657698 None:intergenic 50.0%
CGTCAATACGAACACCCAGA+TGG + chr3_2:70657742-70657761 None:intergenic 50.0%
! GGTGTTCGTATTGACGGCAT+TGG - chr3_2:70657746-70657765 Msa0421630:intron 50.0%
GTCGCAGTTGAAAGAACTGG+TGG - chr3_2:70658153-70658172 Msa0421630:CDS 50.0%
ATAACAACAGGCGAGGAGGA+GGG + chr3_2:70658348-70658367 None:intergenic 50.0%
AATAACAACAGGCGAGGAGG+AGG + chr3_2:70658349-70658368 None:intergenic 50.0%
! TGTTGGGTGCTGCAGATGAT+TGG - chr3_2:70658389-70658408 Msa0421630:CDS 50.0%
TGTTGGACCTTGCACATCGA+TGG - chr3_2:70658645-70658664 Msa0421630:intron 50.0%
ACCTTGCACATCGATGGAGA+AGG - chr3_2:70658651-70658670 Msa0421630:intron 50.0%
ACCTTCTCCATCGATGTGCA+AGG + chr3_2:70658655-70658674 None:intergenic 50.0%
ATGGCGGTATCAGCAACAGA+AGG + chr3_2:70658818-70658837 None:intergenic 50.0%
TCTGTTGCTGATACCGCCAT+AGG - chr3_2:70658818-70658837 Msa0421630:CDS 50.0%
TGTTGTGTTCCCCTCTCCTA+TGG + chr3_2:70658837-70658856 None:intergenic 50.0%
GGAACTGCAGGTACAGTTGT+GGG + chr3_2:70658955-70658974 None:intergenic 50.0%
AGGAACTGCAGGTACAGTTG+TGG + chr3_2:70658956-70658975 None:intergenic 50.0%
ATTGCACACGGTGGTTGGAT+AGG - chr3_2:70659946-70659965 Msa0421630:CDS 50.0%
ACATCCAACAATGCTGGTGC+AGG + chr3_2:70660296-70660315 None:intergenic 50.0%
TGCACCAGCATTGTTGGATG+TGG - chr3_2:70660295-70660314 Msa0421630:intron 50.0%
GAAGCCACATCCAACAATGC+TGG + chr3_2:70660302-70660321 None:intergenic 50.0%
TCAGAACCAACCAGAACACC+AGG - chr3_2:70660415-70660434 Msa0421630:intron 50.0%
CACAAACCTGGTGTTCTGGT+TGG + chr3_2:70660424-70660443 None:intergenic 50.0%
TGCACACAAACCTGGTGTTC+TGG + chr3_2:70660428-70660447 None:intergenic 50.0%
! GTGGACGGTGTTTTGCTTAG+AGG - chr3_2:70660560-70660579 Msa0421630:CDS 50.0%
CTTTGAGCATCTGCAAAGGC+TGG - chr3_2:70661044-70661063 Msa0421630:CDS 50.0%
ATGGCGAACACAGATCCCGA+GGG - chr3_2:70655541-70655560 Msa0421630:three_prime_UTR 55.0%
ACAGATCCCGAGGGAATCGA+CGG - chr3_2:70655550-70655569 Msa0421630:three_prime_UTR 55.0%
TCGACGGAGTCCGTATGACA+TGG - chr3_2:70655566-70655585 Msa0421630:three_prime_UTR 55.0%
GGCGAGTGGGATAACGCATT+TGG + chr3_2:70655623-70655642 None:intergenic 55.0%
ACGGATGAGGGAGATTGTGG+CGG + chr3_2:70655644-70655663 None:intergenic 55.0%
GGGGTGCATAAGGAAGACTG+GGG + chr3_2:70655681-70655700 None:intergenic 55.0%
! GAGGGGTGCATAAGGAAGAC+TGG + chr3_2:70655683-70655702 None:intergenic 55.0%
! TTGCAACGGAGGGGTGCATA+AGG + chr3_2:70655691-70655710 None:intergenic 55.0%
! GTGCAGGTTTTGCAACGGAG+GGG + chr3_2:70655700-70655719 None:intergenic 55.0%
! GGTGCAGGTTTTGCAACGGA+GGG + chr3_2:70655701-70655720 None:intergenic 55.0%
! AGGTGCAGGTTTTGCAACGG+AGG + chr3_2:70655702-70655721 None:intergenic 55.0%
! AGGGTTGAGAATGGAGGTGC+AGG + chr3_2:70655716-70655735 None:intergenic 55.0%
GCGGGAGTAAGGGTTGAGAA+TGG + chr3_2:70655725-70655744 None:intergenic 55.0%
ACAGGGGAAGGAGGAGGATT+AGG + chr3_2:70655898-70655917 None:intergenic 55.0%
ATCCTTCGGGACTCAGGTTC+AGG - chr3_2:70656029-70656048 Msa0421630:CDS 55.0%
AACCTGAACCTGAGTCCCGA+AGG + chr3_2:70656034-70656053 None:intergenic 55.0%
GCTGCCAGGAGACCCATTAA+AGG - chr3_2:70656162-70656181 Msa0421630:intron 55.0%
GCCAGGAGACCCATTAAAGG+TGG - chr3_2:70656165-70656184 Msa0421630:intron 55.0%
CCGCCAGGACCACCTTTAAT+GGG + chr3_2:70656177-70656196 None:intergenic 55.0%
CCCATTAAAGGTGGTCCTGG+CGG - chr3_2:70656174-70656193 Msa0421630:intron 55.0%
ACCGCCAGGACCACCTTTAA+TGG + chr3_2:70656178-70656197 None:intergenic 55.0%
AAAGGTGGTCCTGGCGGTAT+TGG - chr3_2:70656180-70656199 Msa0421630:intron 55.0%
GATCAATGGCCTGTTCCACC+TGG - chr3_2:70656387-70656406 Msa0421630:intron 55.0%
ATGCACTGAAGGACCTGGCA+CGG - chr3_2:70656518-70656537 Msa0421630:intron 55.0%
TCTCCCTAACCGGCAATGCT+TGG - chr3_2:70657673-70657692 Msa0421630:intron 55.0%
! GTAGCCAAGCATTGCCGGTT+AGG + chr3_2:70657680-70657699 None:intergenic 55.0%
AACCGGCAATGCTTGGCTAC+AGG - chr3_2:70657680-70657699 Msa0421630:intron 55.0%
! GTCCTGTAGCCAAGCATTGC+CGG + chr3_2:70657685-70657704 None:intergenic 55.0%
GAGGATGGGGAGCAATCTCT+TGG - chr3_2:70658240-70658259 Msa0421630:intron 55.0%
TGCTGATACCGCCATAGGAG+AGG - chr3_2:70658823-70658842 Msa0421630:CDS 55.0%
GCTGATACCGCCATAGGAGA+GGG - chr3_2:70658824-70658843 Msa0421630:CDS 55.0%
CTGATACCGCCATAGGAGAG+GGG - chr3_2:70658825-70658844 Msa0421630:CDS 55.0%
TGTGTTCCCCTCTCCTATGG+CGG + chr3_2:70658834-70658853 None:intergenic 55.0%
! AGTTGTGGGTTGACACCACC+TGG + chr3_2:70658941-70658960 None:intergenic 55.0%
CTAATTGACCATCTGGGCCC+TGG + chr3_2:70659098-70659117 None:intergenic 55.0%
GCGACGCTCACAGTTTGTAC+AGG - chr3_2:70660076-70660095 Msa0421630:intron 55.0%
ACTGCCTGCACCAGCATTGT+TGG - chr3_2:70660289-70660308 Msa0421630:intron 55.0%
TGGCTTCCATTGCTGCAGAC+CGG - chr3_2:70660315-70660334 Msa0421630:intron 55.0%
CAGAATCCGGTCTGCAGCAA+TGG + chr3_2:70660324-70660343 None:intergenic 55.0%
GGCATGACTGCACACAAACC+TGG + chr3_2:70660436-70660455 None:intergenic 55.0%
GTGTGATCAACACGGTTCCC+AGG - chr3_2:70660747-70660766 Msa0421630:CDS 55.0%
! AGGCTGGCTGTCCAATCTTG+AGG - chr3_2:70661060-70661079 Msa0421630:CDS 55.0%
! GGCTGGCTGTCCAATCTTGA+GGG - chr3_2:70661061-70661080 Msa0421630:CDS 55.0%
GATGGCGAACACAGATCCCG+AGG - chr3_2:70655540-70655559 Msa0421630:three_prime_UTR 60.0%
!! ACGGACTCCGTCGATTCCCT+CGG + chr3_2:70655560-70655579 None:intergenic 60.0%
GGTCGTTTGCCAGGTGGAAC+AGG + chr3_2:70656399-70656418 None:intergenic 60.0%
CATCGAGCAGGTCGTTTGCC+AGG + chr3_2:70656408-70656427 None:intergenic 60.0%
GCAACTCCGGTACATCGAGC+AGG + chr3_2:70656420-70656439 None:intergenic 60.0%
GTTGGAGGGCCATGCACTGA+AGG - chr3_2:70656507-70656526 Msa0421630:intron 60.0%
GTGCCAGGTCCTTCAGTGCA+TGG + chr3_2:70656519-70656538 None:intergenic 60.0%
TGCAGTTACCAGGGCCCAGA+TGG - chr3_2:70659087-70659106 Msa0421630:intron 60.0%
AATGCGCACGAGATGGCTGC+TGG - chr3_2:70660979-70660998 Msa0421630:CDS 60.0%
!! CGGACTCCGTCGATTCCCTC+GGG + chr3_2:70655559-70655578 None:intergenic 65.0%
GGGAGATTGTGGCGGCGAGT+GGG + chr3_2:70655636-70655655 None:intergenic 65.0%
AGGGAGATTGTGGCGGCGAG+TGG + chr3_2:70655637-70655656 None:intergenic 65.0%
! GGTGGTCCTGGCGGTATTGG+TGG - chr3_2:70656183-70656202 Msa0421630:intron 65.0%
!! GGTCCTGGCGGTATTGGTGG+TGG - chr3_2:70656186-70656205 Msa0421630:intron 65.0%
GCACCACCACCAATACCGCC+AGG + chr3_2:70656192-70656211 None:intergenic 65.0%
CGAGCAGGTCGTTTGCCAGG+TGG + chr3_2:70656405-70656424 None:intergenic 65.0%
GGGCCATGCACTGAAGGACC+TGG - chr3_2:70656513-70656532 Msa0421630:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 70655356 70661663 70655356 ID=Msa0421630;Name=Msa0421630
chr3_2 mRNA 70655356 70661663 70655356 ID=Msa0421630-mRNA-1;Parent=Msa0421630;Name=Msa0421630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=176|1|1|1|1|1|12|583|771
chr3_2 exon 70655356 70656085 70655356 ID=Msa0421630-mRNA-1:exon:17030;Parent=Msa0421630-mRNA-1
chr3_2 exon 70656251 70656355 70656251 ID=Msa0421630-mRNA-1:exon:17029;Parent=Msa0421630-mRNA-1
chr3_2 exon 70656583 70656846 70656583 ID=Msa0421630-mRNA-1:exon:17028;Parent=Msa0421630-mRNA-1
chr3_2 exon 70656922 70657083 70656922 ID=Msa0421630-mRNA-1:exon:17027;Parent=Msa0421630-mRNA-1
chr3_2 exon 70657424 70657501 70657424 ID=Msa0421630-mRNA-1:exon:17026;Parent=Msa0421630-mRNA-1
chr3_2 exon 70657846 70657927 70657846 ID=Msa0421630-mRNA-1:exon:17025;Parent=Msa0421630-mRNA-1
chr3_2 exon 70658038 70658210 70658038 ID=Msa0421630-mRNA-1:exon:17024;Parent=Msa0421630-mRNA-1
chr3_2 exon 70658347 70658422 70658347 ID=Msa0421630-mRNA-1:exon:17023;Parent=Msa0421630-mRNA-1
chr3_2 exon 70658745 70658887 70658745 ID=Msa0421630-mRNA-1:exon:17022;Parent=Msa0421630-mRNA-1
chr3_2 exon 70659881 70660042 70659881 ID=Msa0421630-mRNA-1:exon:17021;Parent=Msa0421630-mRNA-1
chr3_2 exon 70660480 70660653 70660480 ID=Msa0421630-mRNA-1:exon:17020;Parent=Msa0421630-mRNA-1
chr3_2 exon 70660738 70661663 70660738 ID=Msa0421630-mRNA-1:exon:17019;Parent=Msa0421630-mRNA-1
chr3_2 five_prime_UTR 70661488 70661663 70661488 ID=Msa0421630-mRNA-1:five_prime_utr;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70660738 70661487 70660738 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70660480 70660653 70660480 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70659881 70660042 70659881 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70658745 70658887 70658745 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70658347 70658422 70658347 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70658038 70658210 70658038 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70657846 70657927 70657846 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70657424 70657501 70657424 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70656922 70657083 70656922 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70656583 70656846 70656583 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70656251 70656355 70656251 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 CDS 70655939 70656085 70655939 ID=Msa0421630-mRNA-1:cds;Parent=Msa0421630-mRNA-1
chr3_2 three_prime_UTR 70655356 70655938 70655356 ID=Msa0421630-mRNA-1:three_prime_utr;Parent=Msa0421630-mRNA-1
Gene Sequence

>Msa0421630

ATGTCGGAGATGGCGAACACAGATCCCGAGGGAATCGACGGAGTCCGTATGACATGGAACGTCTGGCCACGTAGCAAAGTAGAATCCTCCAAATGCGTTATCCCACTCGCCGCCACAATCTCCCTCATCCGTTCTCATCCCGATATCCCCAGTCTTCCTTATGCACCCCTCCGTTGCAAAACCTGCACCTCCATTCTCAACCCTTACTCCCGCGTTGATTTCACCGCTAAGATCTGGATCTGTCCATTTTGTTATCAACGGAACCATTTTCCACCTCATTACAACGCGATTTCTGAAACTCATCTCCCTGGTGAACTCTATCCTCAATACACCACCGTTGAATATCATATCCCTCATACCGATCCTAATCCTCCTCCTTCCCCTGTTTTTCTCTTTCTGCTTGATACTTGTATCATCGAAGAAGAGATTAATTATCTCAAATCGGCTCTTGGTAGAGCAATTGGGCTTTTACCTGATAATGCTCTTGTTGGGTTTTTATCCTTCGGGACTCAGGTTCAGGTTCATGAATTGGGATTTTCTGATATGTCTAAAGTTTATGTTTTTCGCGGCTCCAAAGAGATTTCCAAAGATCAGATTTTGGAACAATTGGGTCTTGCTTCTTCTAATTCTGCTGCCAGGAGACCCATTAAAGGTGGTCCTGGCGGTATTGGTGGTGGTGCTCCTTTTCCCAATTCCGGTGTTTCACGATTTTTGTTGCCTGCTTCTGATTGCGAATACACTCTCAATGCGCTGTTGGAGGAATTGCAGAGAGATCAATGGCCTGTTCCACCTGGCAAACGACCTGCTCGATGTACCGGAGTTGCATTGAGTGTTGCAGCTGGATTGCTCAGTGCTTGTAATCCTGGGACTGGGGCTAGAATTATAGCTTTGGTTGGAGGGCCATGCACTGAAGGACCTGGCACGATTGTGTCGAAAGAACTATCTGACCCAGTGCGTTCTCATAAAGATCTTGATAAAGATGCGGCACCTTACTTTAAGAAAGCAGTGAAGTTTTATGAGGGTCTTGCAAAACAGCTGGTTAACCAGGGTCATGTTTTAGATCTTTTTGCATCAGCACTTGATCAGGTTGGAGTTGCAGAAATGAAAGTCGCAGTTGAAAGAACTGGTGGCCTTGTTGTCCTGTCTGAAAGTTTTGGTCATTCAGTCTTCAAGGACTCTTTTAAGCGTGTTTTTGAGGATGGGGAGCAATCTCTTGGTCTCTGTTTCAATGGGACCCTTGAGATAAATTGCTCAAAGGAAATCAAAATTCAGGGAATTGTTGGACCTTGCACATCGATGGAGAAGAAAGGACCTTCTGTTGCTGATACCGCCATAGGAGAGGGGAACACAACAATATGGAAGATGTGTGGTCTTGACAAGAGTACATGCTTGACTGTGATGTTTGATCTTTCATCAAGTGATCGTTCAAATACTCCAGGTGGTGTCAACCCACAACTGTACCTGCAGTTCCTTACAAGTTACCAGGGCCCAGATGGTCAATTAGTGCTTCGTGCGACAACAGTAACTAGAAGATGGGTAGATAGTGCTGTTAGCTCTGAGGAATTGGCTCAAGGATTTGACCAAGAAACTGCTGCAGTTGTAATGGCTAGATATGCTTCTCTGAAAATGGAGACAGAGGAAACATTTGATTGCACACGGTGGTTGGATAGGTTCCTCATTCGCCTCTGTTCTAAGTTTGGGGATTACCGCAAGGATGATCCATCATCTTTTACATTAAATCCATCATTTTCTCTTTTCCCCCAGTTTATGTTCAATCTGCGACGCTCACAGTTTGTACAGGTTTTTAACAACAGTCCAGATGAGACTGCATACTTTCGCATGTTGTTAAACCGGGAAAATATTAATAATGCGGCTGTCATGATTCAGCCATCACTAATATCATATTCATTTAATTCACTGCCTGCACCAGCATTGTTGGATGTGGCTTCCATTGCTGCAGACCGGATTCTGTTGCTAGATTCATATTTTAGTGTGGTTATTTTTCATGGGATGACAATAGCTCAATGGCGCAACTTGGGATATCAGAACCAACCAGAACACCAGGCTTTTGCACAACTGTTACGAGCTCCACAAGATGATTCCCAAGCAATAATTAGAGATCGGTTTCCTGTTCCTAGATTGGTAGTGTGTGATCAACACGGTTCCCAGGCTAGATTTTTATTAGCAAAACTGAATCCGTCAGCAACATATAATAATGCGCACGAGATGGCTGCTGGTTCAGATGTAATCTTTACTGATGATGTTAGCCTTCAAGTTTTCTTTGAGCATCTGCAAAGGCTGGCTGTCCAATCTTGA

Protein sequence

>Msa0421630

MSEMANTDPEGIDGVRMTWNVWPRSKVESSKCVIPLAATISLIRSHPDIPSLPYAPLRCKTCTSILNPYSRVDFTAKIWICPFCYQRNHFPPHYNAISETHLPGELYPQYTTVEYHIPHTDPNPPPSPVFLFLLDTCIIEEEINYLKSALGRAIGLLPDNALVGFLSFGTQVQVHELGFSDMSKVYVFRGSKEISKDQILEQLGLASSNSAARRPIKGGPGGIGGGAPFPNSGVSRFLLPASDCEYTLNALLEELQRDQWPVPPGKRPARCTGVALSVAAGLLSACNPGTGARIIALVGGPCTEGPGTIVSKELSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQLVNQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEINCSKEIKIQGIVGPCTSMEKKGPSVADTAIGEGNTTIWKMCGLDKSTCLTVMFDLSSSDRSNTPGGVNPQLYLQFLTSYQGPDGQLVLRATTVTRRWVDSAVSSEELAQGFDQETAAVVMARYASLKMETEETFDCTRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENINNAAVMIQPSLISYSFNSLPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQAFAQLLRAPQDDSQAIIRDRFPVPRLVVCDQHGSQARFLLAKLNPSATYNNAHEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS*