AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0425160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0425160 MtrunA17_Chr3g0127171 95.869 702 29 0 1 702 1 702 0.0 1364
Msa0425160 MtrunA17_Chr1g0146771 61.570 726 234 15 1 700 1 707 0.0 840
Msa0425160 MtrunA17_Chr8g0388841 42.954 738 343 18 11 702 9 714 0.0 541
Msa0425160 MtrunA17_Chr8g0384061 38.095 672 327 16 43 700 47 643 6.60e-127 390
Msa0425160 MtrunA17_Chr2g0317931 42.287 551 252 13 195 702 331 858 1.54e-124 391
Msa0425160 MtrunA17_Chr3g0129821 43.685 483 244 7 222 700 168 626 6.30e-116 362
Msa0425160 MtrunA17_Chr7g0238321 46.565 393 193 6 203 585 381 766 5.79e-93 309
Msa0425160 MtrunA17_Chr4g0067151 29.075 227 145 9 340 559 66 283 1.65e-19 90.5
Msa0425160 MtrunA17_Chr4g0067151 27.350 234 140 9 240 461 19 234 3.75e-13 71.2
Msa0425160 MtrunA17_Chr1g0185501 25.833 240 158 8 327 559 48 274 1.18e-18 87.8
Msa0425160 MtrunA17_Chr4g0069701 25.581 215 152 6 347 556 401 612 3.46e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0425160 AT5G24320.1 47.075 718 319 16 11 702 12 694 0.0 596
Msa0425160 AT5G24320.2 47.091 722 317 17 11 702 12 698 0.0 595
Msa0425160 AT5G53500.2 48.050 718 289 13 1 700 1 652 0.0 586
Msa0425160 AT5G53500.1 48.050 718 289 13 1 700 1 652 0.0 586
Msa0425160 AT5G42010.1 48.496 532 240 13 188 702 195 709 8.98e-163 486
Msa0425160 AT1G64610.2 49.242 528 218 14 186 702 159 647 5.07e-158 471
Msa0425160 AT1G64610.1 49.242 528 218 14 186 702 159 647 5.07e-158 471
Msa0425160 AT5G42010.2 54.118 340 151 4 188 522 195 534 8.50e-125 383
Msa0425160 AT5G54200.1 39.233 678 340 22 74 700 167 823 9.23e-122 383
Msa0425160 AT3G15470.1 42.495 513 249 12 221 702 386 883 1.69e-118 376
Msa0425160 AT1G48870.2 40.816 490 225 11 213 699 163 590 4.64e-104 330
Msa0425160 AT1G48870.3 40.816 490 225 11 213 699 163 590 4.64e-104 330
Msa0425160 AT1G48870.1 40.816 490 225 11 213 699 163 590 4.64e-104 330
Msa0425160 AT2G37670.2 40.038 522 261 13 223 699 380 894 3.56e-93 309
Msa0425160 AT2G37670.1 40.038 522 261 13 223 699 379 893 3.57e-93 309
Msa0425160 AT5G02430.1 45.501 389 197 8 221 596 384 770 6.31e-90 300
Msa0425160 AT3G49660.1 23.385 325 176 12 242 559 18 276 7.88e-18 85.5
Msa0425160 AT4G02730.1 29.224 219 138 10 345 555 78 287 6.45e-17 83.2
Msa0425160 AT2G16405.1 24.786 234 160 4 340 557 202 435 6.65e-14 75.1
Msa0425160 AT5G67320.1 24.691 243 142 9 240 446 357 594 1.81e-11 67.8

Find 226 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTGACACCATTGTTTA+TGG 0.074372 3_2:-75504996 Msa0425160:CDS
ACTACATGCTACAAAGTTTA+TGG 0.160182 3_2:-75502884 Msa0425160:three_prime_UTR
GATTCCCAACTATGCTTAAT+TGG 0.172014 3_2:-75503901 Msa0425160:CDS
CAGAGGGATAACTGGCTTTC+AGG 0.188767 3_2:-75503860 Msa0425160:intron
ATGCTTGAGGGGTCAATTTC+AGG 0.194762 3_2:+75505043 None:intergenic
CTTTCATCTTAGCAACTAAA+AGG 0.214674 3_2:+75502380 None:intergenic
CTTGAGAATGATGTTAAATT+TGG 0.227107 3_2:-75502668 Msa0425160:three_prime_UTR
AAGAGGATGTTGTGTCTATT+AGG 0.227175 3_2:-75505861 Msa0425160:CDS
GAGGAGAAGCTTCCTGTTTC+GGG 0.230139 3_2:-75503153 Msa0425160:CDS
CGAGGAGAAGCTTCCTGTTT+CGG 0.236200 3_2:-75503154 Msa0425160:CDS
TTGATCTTAAAGTCTTAATT+AGG 0.237629 3_2:-75502518 Msa0425160:three_prime_UTR
GTACAGGTAGCCCGTAATTT+TGG 0.245270 3_2:+75502992 None:intergenic
GCCATCTCAAGATGGAAATT+TGG 0.253348 3_2:-75505536 Msa0425160:CDS
ACATGTAACCATAACTTTCT+TGG 0.275795 3_2:+75503724 None:intergenic
TGTAAGTGTGTGTATATATA+TGG 0.279749 3_2:+75506567 None:intergenic
TGGTTACTAGAACGGTAAAT+AGG 0.280748 3_2:-75505366 Msa0425160:CDS
AGAGTGTGTGTTTGAAAATT+AGG 0.282450 3_2:+75506453 None:intergenic
CCTAACTTTCTTAGATTTCA+TGG 0.283800 3_2:+75503383 None:intergenic
TCCAACAACCGGAAGATCTT+AGG 0.295299 3_2:+75504905 None:intergenic
GATCACATGGATGGCAAAAT+TGG 0.299956 3_2:+75502282 None:intergenic
TTAAAGTCTTAATTAGGTTT+TGG 0.300005 3_2:-75502512 Msa0425160:three_prime_UTR
GAATCCTGGTCCAAAGTTTA+TGG 0.301176 3_2:-75502694 Msa0425160:three_prime_UTR
GATGCGCACCTTTCCGTCTA+TGG 0.305937 3_2:+75504463 None:intergenic
AAATGATCCTGCGATTGATT+TGG 0.309802 3_2:+75502805 None:intergenic
GTGAGTTCTTCGGAGGAATT+TGG 0.313989 3_2:-75505580 Msa0425160:CDS
GAGAAAGAAGCAGGTGCGTT+GGG 0.319651 3_2:+75503231 None:intergenic
CTACGCTCTCTCACACTCTT+TGG 0.324124 3_2:+75505763 None:intergenic
GATGAAGATTATTTCATTAG+TGG 0.325769 3_2:-75504488 Msa0425160:CDS
GGGATTGTTGGATCTTTAGA+AGG 0.327630 3_2:-75504263 Msa0425160:CDS
AATTGTAGTTGAAAATTCAT+TGG 0.330145 3_2:-75505701 Msa0425160:CDS
AATTCCGATGATGATGATAA+AGG 0.332077 3_2:-75505832 Msa0425160:CDS
GTGGTGAAGATGGGGTTGTT+CGG 0.332946 3_2:-75505111 Msa0425160:CDS
ATCAAGATTCATTGCTTTGT+TGG 0.334144 3_2:-75502926 Msa0425160:three_prime_UTR
GACACCATTGTTTATGGATA+AGG 0.339226 3_2:-75504990 Msa0425160:CDS
CTTCCTGGCAGAGGGATAAC+TGG 0.340161 3_2:-75503868 Msa0425160:CDS
TGGTGAAGATGGGGTTGTTC+GGG 0.350996 3_2:-75505110 Msa0425160:CDS
ATTGATAGATAGAGAGTTTG+AGG 0.355153 3_2:-75505404 Msa0425160:CDS
TTCGGAGGAATTTGGTTTAG+TGG 0.361491 3_2:-75505572 Msa0425160:CDS
AGGACTCTAATGTATATCTA+TGG 0.364797 3_2:-75503434 Msa0425160:CDS
TAGTCCTGATGGGCAGTATC+TGG 0.368035 3_2:-75505140 Msa0425160:CDS
GAGGATTGTGTAAATGTCTC+TGG 0.370035 3_2:-75505445 Msa0425160:CDS
ATTCCGATGATGATGATAAA+GGG 0.370977 3_2:-75505831 Msa0425160:CDS
TATCATGCGGTAATCAATTT+CGG 0.373903 3_2:+75502730 None:intergenic
TGGGCATAGAAGTGAAGTTT+TGG 0.376344 3_2:-75504861 Msa0425160:CDS
TAGACGGAAAGGTGCGCATC+TGG 0.381026 3_2:-75504460 Msa0425160:CDS
CCGATTCTCAGGTTGTTGAT+TGG 0.381470 3_2:-75504430 Msa0425160:CDS
GCCTAAGATCTTCCGGTTGT+TGG 0.381485 3_2:-75504906 Msa0425160:CDS
CCATGAAATCTAAGAAAGTT+AGG 0.382192 3_2:-75503383 Msa0425160:CDS
GAAGGGAGCTATGCAGTCTC+AGG 0.387775 3_2:-75505280 Msa0425160:CDS
ATGAAATAATCTTCATCAAC+AGG 0.393624 3_2:+75504494 None:intergenic
CTGACAAAACTGTCCGACTA+TGG 0.394030 3_2:-75504700 Msa0425160:CDS
GTTGATAATGATAGAGAAGA+AGG 0.394764 3_2:-75505298 Msa0425160:CDS
TTGCTCTAGTGTGAGTTCTT+CGG 0.402105 3_2:-75505590 Msa0425160:CDS
TCAAGATTCCAAGAAAGTTA+TGG 0.411964 3_2:-75503732 Msa0425160:CDS
CTGGCTACAGGTGGTGAAGA+TGG 0.415140 3_2:-75505121 Msa0425160:CDS
TCCTGCGATTGATTTGGAAT+TGG 0.416200 3_2:+75502811 None:intergenic
TTGATTATGAAGTGTGGATT+CGG 0.416684 3_2:-75505789 Msa0425160:CDS
ATGTTAAATTTGGCAGCATA+AGG 0.417388 3_2:-75502658 Msa0425160:three_prime_UTR
TTGGTCTTGGAGCCCGAAAC+AGG 0.417453 3_2:+75503141 None:intergenic
AAGTCACACTTCATTTCAAA+CGG 0.422322 3_2:+75502969 None:intergenic
GGTTACTAGAACGGTAAATA+GGG 0.425943 3_2:-75505365 Msa0425160:CDS
AGTGGCTCGAAGTCTTTGTT+TGG 0.426122 3_2:-75502129 Msa0425160:three_prime_UTR
TTCCAAAGGGATCTGCAACC+TGG 0.426271 3_2:-75503179 Msa0425160:CDS
ATATCTATGGAACGTTAATC+AGG 0.429417 3_2:-75503421 Msa0425160:CDS
GGCCAGGTTGCAGATCCCTT+TGG 0.430320 3_2:+75503177 None:intergenic
ACCCCACGCATGAGCATTGT+TGG 0.432490 3_2:+75503059 None:intergenic
TTTACCAATTAAGCATAGTT+GGG 0.432871 3_2:+75503897 None:intergenic
TCTCAAGCCTCCATAAACTT+TGG 0.434188 3_2:+75502684 None:intergenic
TTCTATTTCTCTCAACCAAA+AGG 0.435095 3_2:+75501926 None:intergenic
CTGGACGATACCCGATTCTC+AGG 0.435686 3_2:-75504441 Msa0425160:CDS
CCCATCAGGACTAAATTTCA+TGG 0.436002 3_2:+75505150 None:intergenic
TTAAATAATACCTGCCCATC+CGG 0.437117 3_2:+75504368 None:intergenic
CCGCATGATATTTGAAGTGC+AGG 0.437193 3_2:-75502717 Msa0425160:three_prime_UTR
CCAATCAACAACCTGAGAAT+CGG 0.440688 3_2:+75504430 None:intergenic
ATTTGAAGTGCAGGGAATCC+TGG 0.454134 3_2:-75502708 Msa0425160:three_prime_UTR
GTATAACAGGGAGGGATTGT+TGG 0.454570 3_2:-75504275 Msa0425160:intron
TGGTCATTGTGACTGCAGGC+TGG 0.456531 3_2:-75503035 Msa0425160:CDS
AAATTGCACCTTCATGCGCT+TGG 0.462786 3_2:+75505176 None:intergenic
TCACAAGTCAGAATCCTTGA+TGG 0.465301 3_2:-75503695 Msa0425160:CDS
TTTCATCTTAGCAACTAAAA+GGG 0.466148 3_2:+75502381 None:intergenic
ACCATGAAATTTAGTCCTGA+TGG 0.466588 3_2:-75505151 Msa0425160:CDS
TCGGGTGTGGCAAGTGGTTG+AGG 0.469415 3_2:-75505092 Msa0425160:CDS
TACCGCAACTGATGCGTTTG+AGG 0.470561 3_2:+75503344 None:intergenic
CAATGCTCATGCGTGGGGTA+TGG 0.470834 3_2:-75503055 Msa0425160:CDS
CTAACTTTCTTAGATTTCAT+GGG 0.472148 3_2:+75503384 None:intergenic
TAGGGGCCAGTAGATTCTTG+TGG 0.472471 3_2:+75502488 None:intergenic
GATCTTTAGAAGGAAATTGT+TGG 0.473234 3_2:-75504253 Msa0425160:CDS
TGGCTACAGGTGGTGAAGAT+GGG 0.475427 3_2:-75505120 Msa0425160:CDS
GTAGCCAGATACTGCCCATC+AGG 0.476689 3_2:+75505136 None:intergenic
AGAGAAAGAAGCAGGTGCGT+TGG 0.479715 3_2:+75503230 None:intergenic
AGGATTGTGTAAATGTCTCT+GGG 0.480040 3_2:-75505444 Msa0425160:CDS
ACATTGGACTGCCTGTGTTA+AGG 0.480580 3_2:+75503502 None:intergenic
TTGTGACTGCAGGCTGGGAC+GGG 0.481187 3_2:-75503029 Msa0425160:CDS
AGAGGATGTTGTGTCTATTA+GGG 0.481348 3_2:-75505860 Msa0425160:CDS
GTCATTGATTTGAGATCGAA+TGG 0.484504 3_2:+75502752 None:intergenic
AAGATGGGGTTGTTCGGGTG+TGG 0.485043 3_2:-75505105 Msa0425160:CDS
GTAAGTGTGTGTATATATAT+GGG 0.485121 3_2:+75506568 None:intergenic
GATGGGCAGTATCTGGCTAC+AGG 0.486225 3_2:-75505133 Msa0425160:CDS
AGGAAGCTTCTCCTCGGGCC+AGG 0.488808 3_2:+75503161 None:intergenic
AACGGTAAATAGGGCGAGAA+GGG 0.489976 3_2:-75505356 Msa0425160:CDS
ATTGTGACTGCAGGCTGGGA+CGG 0.490386 3_2:-75503030 Msa0425160:CDS
CAATCAACAACCTGAGAATC+GGG 0.492398 3_2:+75504431 None:intergenic
AAATCAGTTGGTAGTTGCTA+AGG 0.492824 3_2:-75505473 Msa0425160:CDS
CATGATCAATCAAAATGCTA+AGG 0.496976 3_2:-75502322 Msa0425160:three_prime_UTR
ACTTCATTTCAAACGGGTAC+AGG 0.498608 3_2:+75502976 None:intergenic
AAATCACATTAAACCCATCA+AGG 0.499697 3_2:+75503681 None:intergenic
ACCAGATAATCACTTGCAGC+TGG 0.500109 3_2:-75503923 Msa0425160:intron
GAAACAGGAAGCTTCTCCTC+GGG 0.503691 3_2:+75503156 None:intergenic
CGAAACAGGAAGCTTCTCCT+CGG 0.504206 3_2:+75503155 None:intergenic
CACAAGTCAGAATCCTTGAT+GGG 0.504559 3_2:-75503694 Msa0425160:CDS
AGTCACACTTCATTTCAAAC+GGG 0.505736 3_2:+75502970 None:intergenic
TCCAAATTTCCATCTTGAGA+TGG 0.506574 3_2:+75505535 None:intergenic
AAAGAGTGTGAGAGAGCGTA+GGG 0.507140 3_2:-75505761 Msa0425160:CDS
AACATCATTGCTGCGAAAGT+CGG 0.511514 3_2:-75503115 Msa0425160:CDS
TTACAAATTTACATCAAATG+AGG 0.512209 3_2:+75501987 None:intergenic
AGTGAATCGTGACCATTGCT+TGG 0.512373 3_2:-75504675 Msa0425160:CDS
ATAAGGTAACAAGCAATTTG+AGG 0.514159 3_2:-75502641 Msa0425160:three_prime_UTR
ACGCATCAGTTGCGGTACCT+TGG 0.514857 3_2:-75503338 Msa0425160:CDS
CAATTGAGAGAGATTATTCA+CGG 0.518723 3_2:+75505012 None:intergenic
GAAATTTGGAGAAAAGAATG+AGG 0.519213 3_2:-75505522 Msa0425160:CDS
TTCATTAGTGGATCCATAGA+CGG 0.522706 3_2:-75504476 Msa0425160:CDS
AACTTTCATCGCTTTACTTG+AGG 0.524102 3_2:-75505207 Msa0425160:CDS
ACGGTAAAGTAAATGCTTGA+GGG 0.525591 3_2:+75505031 None:intergenic
ATGTTATCGACCGGATGGGC+AGG 0.526250 3_2:-75504378 Msa0425160:intron
AATCATATGGGTAGTTTCAG+TGG 0.527946 3_2:-75505913 Msa0425160:exon
TTGATAATGATAGAGAAGAA+GGG 0.528008 3_2:-75505297 Msa0425160:CDS
TTGTACAAAAGAGTTAAACT+TGG 0.529330 3_2:-75502249 Msa0425160:three_prime_UTR
TCAGTGGAGAAGAAGATTGT+CGG 0.529362 3_2:-75505897 Msa0425160:CDS
GGGGAGGTTTATGAAGAGCA+TGG 0.530487 3_2:-75505740 Msa0425160:CDS
TAAATAGGGCGAGAAGGGGT+TGG 0.531097 3_2:-75505351 Msa0425160:CDS
AGATAGTAGTGGTTCTGAAG+AGG 0.531135 3_2:-75505644 Msa0425160:CDS
GATCAAGACAAGCTAAAGCT+TGG 0.531302 3_2:+75502535 None:intergenic
CACGGTAAAGTAAATGCTTG+AGG 0.533661 3_2:+75505030 None:intergenic
TTTGGTCCACAAGAATCTAC+TGG 0.536692 3_2:-75502494 Msa0425160:three_prime_UTR
GCTATGCAGTCTCAGGGTGT+AGG 0.538360 3_2:-75505273 Msa0425160:CDS
ATAACTTTCTTGGAATCTTG+AGG 0.539357 3_2:+75503734 None:intergenic
CAACTAATTAAAGATGATGT+TGG 0.540267 3_2:+75502032 None:intergenic
GACTGCAGTATGTTATCGAC+CGG 0.543308 3_2:-75504387 Msa0425160:CDS
AGAGAGTTTGAGGATGCAGA+TGG 0.543559 3_2:-75505394 Msa0425160:CDS
TCTGGGGTGTCTCATTGTCA+AGG 0.544039 3_2:-75505427 Msa0425160:CDS
ACAAGCAATGTGATTATGAT+CGG 0.546669 3_2:-75502156 Msa0425160:three_prime_UTR
AAGTAAAGGTCCGTCAATGT+AGG 0.547509 3_2:-75505243 Msa0425160:CDS
TGTGCATCATTTACCTCAGA+CGG 0.548187 3_2:-75503480 Msa0425160:CDS
GGTATGGTCATTGTGACTGC+AGG 0.549386 3_2:-75503039 Msa0425160:CDS
GCCTCCATAAACTTTGGACC+AGG 0.549976 3_2:+75502690 None:intergenic
ATGATCAATCAAAATGCTAA+GGG 0.550174 3_2:-75502321 Msa0425160:three_prime_UTR
CCATGAAATTTAGTCCTGAT+GGG 0.550381 3_2:-75505150 Msa0425160:CDS
TGGTTCAGAGAGAAAGAAGC+AGG 0.550963 3_2:+75503222 None:intergenic
TTCCTCAAACGCATCAGTTG+CGG 0.553600 3_2:-75503346 Msa0425160:CDS
TCCAATTCCAAATCAATCGC+AGG 0.556225 3_2:-75502812 Msa0425160:three_prime_UTR
GGTCATTGTGACTGCAGGCT+GGG 0.557152 3_2:-75503034 Msa0425160:CDS
ACATCATCTTTAATTAGTTG+AGG 0.559270 3_2:-75502029 Msa0425160:three_prime_UTR
GAGTGATTGTTCAAATCAGT+TGG 0.560983 3_2:-75505485 Msa0425160:CDS
TAAAATATGTTTCCCGTCTG+AGG 0.561223 3_2:+75503467 None:intergenic
CACCCCTTTATCATCATCAT+CGG 0.561556 3_2:+75505828 None:intergenic
TACCAACAATGCTCATGCGT+GGG 0.562604 3_2:-75503061 Msa0425160:CDS
GGTTGTTCGGGTGTGGCAAG+TGG 0.564414 3_2:-75505098 Msa0425160:CDS
GCAGTATGTTATCGACCGGA+TGG 0.565468 3_2:-75504383 Msa0425160:CDS
CAAAGAGTGTGAGAGAGCGT+AGG 0.568692 3_2:-75505762 Msa0425160:CDS
GTGGAGATTTCAAGAGTTGG+TGG 0.569924 3_2:-75502357 Msa0425160:three_prime_UTR
TTGCCATCCATGTGATCTTG+TGG 0.572237 3_2:-75502276 Msa0425160:three_prime_UTR
CACGATTCACTTGCCATAGT+CGG 0.575462 3_2:+75504687 None:intergenic
AACCATTGCATGAGTTCCGT+GGG 0.575505 3_2:-75504880 Msa0425160:CDS
GAACGGTAAATAGGGCGAGA+AGG 0.577669 3_2:-75505357 Msa0425160:CDS
AAGGTGGAGATTTCAAGAGT+TGG 0.578139 3_2:-75502360 Msa0425160:three_prime_UTR
GCAAGAAAATCAGATTATTG+AGG 0.578747 3_2:-75502606 Msa0425160:three_prime_UTR
AAAAGAAACTTCCTGGCAGA+GGG 0.579638 3_2:-75503876 Msa0425160:CDS
TTAGTTGCTAAGATGAAAGG+TGG 0.581942 3_2:-75502376 Msa0425160:three_prime_UTR
CAAATGGCCACAAGATCACA+TGG 0.582600 3_2:+75502269 None:intergenic
GGGAGGTTTATGAAGAGCAT+GGG 0.583225 3_2:-75505739 Msa0425160:CDS
CTCTAGTGTGAGTTCTTCGG+AGG 0.585376 3_2:-75505587 Msa0425160:CDS
AAGCCAGTTATCCCTCTGCC+AGG 0.589263 3_2:+75503865 None:intergenic
AAACCATTGCATGAGTTCCG+TGG 0.589350 3_2:-75504881 Msa0425160:CDS
GGCTACAGGTGGTGAAGATG+GGG 0.590519 3_2:-75505119 Msa0425160:CDS
TAGTTGAGGTACAACTATGT+TGG 0.590934 3_2:-75502015 Msa0425160:three_prime_UTR
GTTGTTGATGACGAAAGAGG+AGG 0.591914 3_2:+75506484 None:intergenic
CAAGATATCCAAGCGCATGA+AGG 0.592474 3_2:-75505184 Msa0425160:CDS
GAAAGAAGAAGAGATAGTAG+TGG 0.594074 3_2:-75505655 Msa0425160:CDS
TGGTGATGTGGTTACTAGAA+CGG 0.595840 3_2:-75505374 Msa0425160:CDS
AATAACTTGCCATCTCAAGA+TGG 0.595950 3_2:-75505544 Msa0425160:CDS
GGTAGTTGCTAAGGAATCTG+AGG 0.598779 3_2:-75505464 Msa0425160:CDS
AAACTTCACTTCTATGCCCA+CGG 0.602774 3_2:+75504864 None:intergenic
GTGTAGGCTTCAGAAAGTAA+AGG 0.602811 3_2:-75505257 Msa0425160:CDS
GTGCATCATTTACCTCAGAC+GGG 0.603220 3_2:-75503479 Msa0425160:CDS
GAGGTAAATGATGCACACAT+TGG 0.603566 3_2:+75503486 None:intergenic
TAGTGGATCCATAGACGGAA+AGG 0.604269 3_2:-75504471 Msa0425160:CDS
TAACTTTCTTAGATTTCATG+GGG 0.605262 3_2:+75503385 None:intergenic
AGAAAGAAGCAGGTGCGTTG+GGG 0.607080 3_2:+75503232 None:intergenic
TGGAGATTTCAAGAGTTGGT+GGG 0.607639 3_2:-75502356 Msa0425160:three_prime_UTR
AAGAGGAATTTAGTTCATGT+CGG 0.608009 3_2:-75505627 Msa0425160:CDS
AGTGTTGTTGATGACGAAAG+AGG 0.608136 3_2:+75506481 None:intergenic
GTGAAAACACTTCCAAGCAA+TGG 0.611173 3_2:+75504663 None:intergenic
TGCCCACGGAACTCATGCAA+TGG 0.612153 3_2:+75504878 None:intergenic
AAATTTGGAGAAAAGAATGA+GGG 0.614888 3_2:-75505521 Msa0425160:CDS
TTCCGATGATGATGATAAAG+GGG 0.615930 3_2:-75505830 Msa0425160:CDS
CGGTAAAGTAAATGCTTGAG+GGG 0.617370 3_2:+75505032 None:intergenic
AGAGTGTGAGAGAGCGTAGG+GGG 0.617428 3_2:-75505759 Msa0425160:CDS
CAGTATGTTATCGACCGGAT+GGG 0.618616 3_2:-75504382 Msa0425160:CDS
CGCATGATATTTGAAGTGCA+GGG 0.625837 3_2:-75502716 Msa0425160:three_prime_UTR
TGGCCACAAGATCACATGGA+TGG 0.626291 3_2:+75502273 None:intergenic
TCAGTTGCGGTACCTTGGCA+CGG 0.626640 3_2:-75503333 Msa0425160:CDS
ACAACCGGAAGATCTTAGGC+GGG 0.627533 3_2:+75504909 None:intergenic
TCCTGGTCCAAAGTTTATGG+AGG 0.631110 3_2:-75502691 Msa0425160:three_prime_UTR
AACAACACAAGCTGAATCTG+CGG 0.632119 3_2:+75504934 None:intergenic
TCAATGTAGGAAGAAAATGA+AGG 0.633828 3_2:-75505230 Msa0425160:CDS
GTACCAACAATGCTCATGCG+TGG 0.637345 3_2:-75503062 Msa0425160:CDS
GGAGGTTTCAAACCGTGCCA+AGG 0.641872 3_2:+75503321 None:intergenic
TGAGGATGCAGATGGTGATG+TGG 0.643720 3_2:-75505386 Msa0425160:CDS
AACAACCGGAAGATCTTAGG+CGG 0.646128 3_2:+75504908 None:intergenic
GCGAAAACGATGATACAAAG+TGG 0.648362 3_2:+75506531 None:intergenic
TCGAATGGTTCAGATTGCAT+AGG 0.648646 3_2:+75502767 None:intergenic
AAGGGAGCTATGCAGTCTCA+GGG 0.648697 3_2:-75505279 Msa0425160:CDS
GGGATCTGCAACCTGGCCCG+AGG 0.648859 3_2:-75503172 Msa0425160:CDS
GAGTTAAACTTGGAAATGTG+TGG 0.649638 3_2:-75502239 Msa0425160:three_prime_UTR
ACCAACAATGCTCATGCGTG+GGG 0.652027 3_2:-75503060 Msa0425160:CDS
TGTAATTGCATAACAACTTG+TGG 0.663052 3_2:+75503255 None:intergenic
TTATTGAGGTCAATGACAAG+TGG 0.665714 3_2:-75502592 Msa0425160:three_prime_UTR
GGTGTGGCAAGTGGTTGAGG+AGG 0.668449 3_2:-75505089 Msa0425160:CDS
ACGGTAAATAGGGCGAGAAG+GGG 0.672129 3_2:-75505355 Msa0425160:CDS
AGAAAGTTAGGTCTTGTGAG+CGG 0.675224 3_2:-75503371 Msa0425160:CDS
TAAGTGTGTGTATATATATG+GGG 0.697145 3_2:+75506569 None:intergenic
CCTGCACTTCAAATATCATG+CGG 0.697949 3_2:+75502717 None:intergenic
GGGCAGTATCTGGCTACAGG+TGG 0.702356 3_2:-75505130 Msa0425160:CDS
ATTGAGATCGATGACGTGCG+TGG 0.720656 3_2:-75505320 Msa0425160:CDS
AAGAGTGTGAGAGAGCGTAG+GGG 0.726141 3_2:-75505760 Msa0425160:CDS
GGATTGTGTAAATGTCTCTG+GGG 0.731454 3_2:-75505443 Msa0425160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTATATTTGCTGATAT+TGG - chr3_2:75502334-75502353 Msa0425160:three_prime_UTR 15.0%
!! TTGAACTTAAAAAATCATAT+GGG - chr3_2:75502488-75502507 Msa0425160:three_prime_UTR 15.0%
!! AAAATAACTTAAATGGAATA+TGG + chr3_2:75504238-75504257 None:intergenic 15.0%
!!! GTTTTAATAATCAAAATGTT+AGG - chr3_2:75504296-75504315 Msa0425160:intron 15.0%
!! AAATGTTAATCAAGTTATAT+TGG - chr3_2:75504375-75504394 Msa0425160:intron 15.0%
!! AATGTTAATCAAGTTATATT+GGG - chr3_2:75504376-75504395 Msa0425160:intron 15.0%
!! ATAAAAACATTCCAAAATTA+CGG - chr3_2:75505410-75505429 Msa0425160:CDS 15.0%
!!! AAGTAATAGTAATATTTTGT+TGG - chr3_2:75506460-75506479 Msa0425160:five_prime_UTR 15.0%
!! GTATGAAATGAATAAATTGT+TGG + chr3_2:75502054-75502073 None:intergenic 20.0%
!! GAAAACAAAAAAAACAAACA+CGG + chr3_2:75502124-75502143 None:intergenic 20.0%
!! GTTGAACTTAAAAAATCATA+TGG - chr3_2:75502487-75502506 Msa0425160:three_prime_UTR 20.0%
!! AATTGTAGTTGAAAATTCAT+TGG - chr3_2:75502712-75502731 Msa0425160:three_prime_UTR 20.0%
!! GAATAATATGATGTATAACA+GGG - chr3_2:75504126-75504145 Msa0425160:intron 20.0%
!!! TGTTGGTTTTATAAAATATC+AGG - chr3_2:75504177-75504196 Msa0425160:intron 20.0%
!!! ATAACTTGATTAACATTTTG+CGG + chr3_2:75504373-75504392 None:intergenic 20.0%
!!! AGAATACTATCTAAAATTTG+AGG + chr3_2:75504816-75504835 None:intergenic 20.0%
!! AATTATATGTTCTATCACTA+AGG - chr3_2:75504866-75504885 Msa0425160:CDS 20.0%
!!! GTTCATTACATTTTATTTTC+AGG - chr3_2:75504888-75504907 Msa0425160:CDS 20.0%
!! TAAAAACATTCCAAAATTAC+GGG - chr3_2:75505411-75505430 Msa0425160:CDS 20.0%
!! TTGATCTTAAAGTCTTAATT+AGG - chr3_2:75505895-75505914 Msa0425160:CDS 20.0%
!!! TTAAAGTCTTAATTAGGTTT+TGG - chr3_2:75505901-75505920 Msa0425160:CDS 20.0%
!! TAACAAAAATATTCTGTACA+TGG - chr3_2:75506345-75506364 Msa0425160:intron 20.0%
!! TTACAAATTTACATCAAATG+AGG + chr3_2:75506429-75506448 None:intergenic 20.0%
! TAAGTGTGTGTATATATATG+GGG + chr3_2:75501847-75501866 None:intergenic 25.0%
! GTAAGTGTGTGTATATATAT+GGG + chr3_2:75501848-75501867 None:intergenic 25.0%
! TGTAAGTGTGTGTATATATA+TGG + chr3_2:75501849-75501868 None:intergenic 25.0%
! GAAATGAATAAATTGTTGGA+AGG + chr3_2:75502050-75502069 None:intergenic 25.0%
!! TCTTCTTTTTATATCATACC+TGG - chr3_2:75502164-75502183 Msa0425160:three_prime_UTR 25.0%
! TATATCATACCTGGTTATTA+TGG - chr3_2:75502173-75502192 Msa0425160:three_prime_UTR 25.0%
!!! ATGTGTAGTTTTTTATGATC+TGG - chr3_2:75502379-75502398 Msa0425160:three_prime_UTR 25.0%
!!! TGTGTAGTTTTTTATGATCT+GGG - chr3_2:75502380-75502399 Msa0425160:three_prime_UTR 25.0%
! TCGTTTGAAGAGATAAAAAT+TGG - chr3_2:75502408-75502427 Msa0425160:three_prime_UTR 25.0%
!!! TTAAGTTTTTGTTTCCTTGA+AGG - chr3_2:75502452-75502471 Msa0425160:three_prime_UTR 25.0%
!!! TAAGTTTTTGTTTCCTTGAA+GGG - chr3_2:75502453-75502472 Msa0425160:three_prime_UTR 25.0%
!!! TTGATTTTGATTATGAAGTG+TGG - chr3_2:75502618-75502637 Msa0425160:three_prime_UTR 25.0%
!!! AAATTCATTGGATTTTGAGA+AGG - chr3_2:75502724-75502743 Msa0425160:three_prime_UTR 25.0%
! AAATTTGGAGAAAAGAATGA+GGG - chr3_2:75502892-75502911 Msa0425160:three_prime_UTR 25.0%
!!! TTGATAATGATAGAGAAGAA+GGG - chr3_2:75503116-75503135 Msa0425160:CDS 25.0%
!! TTTTCCTTATCCATAAACAA+TGG + chr3_2:75503430-75503449 None:intergenic 25.0%
! TTTATGGATAAGGAAAAACT+TGG - chr3_2:75503433-75503452 Msa0425160:CDS 25.0%
!! CACAATTTGTTTGTATTTGA+TGG - chr3_2:75503866-75503885 Msa0425160:CDS 25.0%
! ATGAAATAATCTTCATCAAC+AGG + chr3_2:75503922-75503941 None:intergenic 25.0%
! GATGAAGATTATTTCATTAG+TGG - chr3_2:75503925-75503944 Msa0425160:intron 25.0%
! AAGCACATGTTTAAATTGAA+TGG + chr3_2:75504084-75504103 None:intergenic 25.0%
! TTTAAACATGTGCTTTATAG+AGG - chr3_2:75504089-75504108 Msa0425160:intron 25.0%
! CGAATAATATGATGTATAAC+AGG - chr3_2:75504125-75504144 Msa0425160:intron 25.0%
! AATGGAATATGGAGATATAT+GGG + chr3_2:75504227-75504246 None:intergenic 25.0%
! AAATGGAATATGGAGATATA+TGG + chr3_2:75504228-75504247 None:intergenic 25.0%
! GGGTCAAAAAATAACTTAAA+TGG + chr3_2:75504245-75504264 None:intergenic 25.0%
! TACTTCTTATTCAAAATCTG+TGG + chr3_2:75504335-75504354 None:intergenic 25.0%
! AATTGAAAACCAGAAATGTT+AGG + chr3_2:75504461-75504480 None:intergenic 25.0%
! TTTACCAATTAAGCATAGTT+GGG + chr3_2:75504519-75504538 None:intergenic 25.0%
!! TTTTACCAATTAAGCATAGT+TGG + chr3_2:75504520-75504539 None:intergenic 25.0%
!! CTTTTTCTCTGACAATTTTT+TGG - chr3_2:75504619-75504638 Msa0425160:intron 25.0%
! TAACTTTCTTAGATTTCATG+GGG + chr3_2:75505031-75505050 None:intergenic 25.0%
! CTAACTTTCTTAGATTTCAT+GGG + chr3_2:75505032-75505051 None:intergenic 25.0%
!! GACATTCAATTGTTCATTTT+CGG + chr3_2:75505123-75505142 None:intergenic 25.0%
!! TTGATTCTATTTTCCAACTT+AGG + chr3_2:75505472-75505491 None:intergenic 25.0%
! CTTGAGAATGATGTTAAATT+TGG - chr3_2:75505745-75505764 Msa0425160:CDS 25.0%
! ATGTGTTAAAAAAACTTGCA+AGG - chr3_2:75505964-75505983 Msa0425160:five_prime_UTR 25.0%
! TGTGTTAAAAAAACTTGCAA+GGG - chr3_2:75505965-75505984 Msa0425160:five_prime_UTR 25.0%
!! TATCAAAATCGTCTCTTTTA+GGG + chr3_2:75505992-75506011 None:intergenic 25.0%
!! ATATCAAAATCGTCTCTTTT+AGG + chr3_2:75505993-75506012 None:intergenic 25.0%
! TTTCATCTTAGCAACTAAAA+GGG + chr3_2:75506035-75506054 None:intergenic 25.0%
! ATGATCAATCAAAATGCTAA+GGG - chr3_2:75506092-75506111 Msa0425160:intron 25.0%
!! GTTTAACTCTTTTGTACAAA+TGG + chr3_2:75506163-75506182 None:intergenic 25.0%
! TTGTACAAAAGAGTTAAACT+TGG - chr3_2:75506164-75506183 Msa0425160:intron 25.0%
! CAACTAATTAAAGATGATGT+TGG + chr3_2:75506384-75506403 None:intergenic 25.0%
! ACATCATCTTTAATTAGTTG+AGG - chr3_2:75506384-75506403 Msa0425160:intron 25.0%
!! TCAATGATGATATCTCTTTT+TGG - chr3_2:75506526-75506545 Msa0425160:five_prime_UTR 25.0%
AGAGTGTGTGTTTGAAAATT+AGG + chr3_2:75501963-75501982 None:intergenic 30.0%
TAAAAGCTGTGAAGACAAAA+GGG + chr3_2:75502076-75502095 None:intergenic 30.0%
TTAAAAGCTGTGAAGACAAA+AGG + chr3_2:75502077-75502096 None:intergenic 30.0%
ATACCTGGTTATTATGGATT+GGG - chr3_2:75502179-75502198 Msa0425160:three_prime_UTR 30.0%
!! TTGGTTTGGTTTGAATCTAT+CGG - chr3_2:75502219-75502238 Msa0425160:three_prime_UTR 30.0%
TTATTGCTTTCTTTGTTCTG+TGG - chr3_2:75502267-75502286 Msa0425160:three_prime_UTR 30.0%
GAAACAAAAACTTAAGTCCT+AGG + chr3_2:75502447-75502466 None:intergenic 30.0%
!! AAGTTTTTGTTTCCTTGAAG+GGG - chr3_2:75502454-75502473 Msa0425160:three_prime_UTR 30.0%
! AATTCCGATGATGATGATAA+AGG - chr3_2:75502581-75502600 Msa0425160:three_prime_UTR 30.0%
! ATTCCGATGATGATGATAAA+GGG - chr3_2:75502582-75502601 Msa0425160:three_prime_UTR 30.0%
TTGATTATGAAGTGTGGATT+CGG - chr3_2:75502624-75502643 Msa0425160:three_prime_UTR 30.0%
!! TTTTGAGAAGGAAGAGATTA+TGG - chr3_2:75502736-75502755 Msa0425160:three_prime_UTR 30.0%
! AAGAGGAATTTAGTTCATGT+CGG - chr3_2:75502786-75502805 Msa0425160:three_prime_UTR 30.0%
GAAATTTGGAGAAAAGAATG+AGG - chr3_2:75502891-75502910 Msa0425160:three_prime_UTR 30.0%
ATTGATAGATAGAGAGTTTG+AGG - chr3_2:75503009-75503028 Msa0425160:CDS 30.0%
!! GTTGATAATGATAGAGAAGA+AGG - chr3_2:75503115-75503134 Msa0425160:CDS 30.0%
! TCATTTTCTTCCTACATTGA+CGG + chr3_2:75503183-75503202 None:intergenic 30.0%
TCAATGTAGGAAGAAAATGA+AGG - chr3_2:75503183-75503202 Msa0425160:CDS 30.0%
CAATTGAGAGAGATTATTCA+CGG + chr3_2:75503404-75503423 None:intergenic 30.0%
TCAATTGACACCATTGTTTA+TGG - chr3_2:75503417-75503436 Msa0425160:CDS 30.0%
AAGAAGATACTGCATTCAAA+AGG + chr3_2:75503683-75503702 None:intergenic 30.0%
! GTGTTTTCACACAGTAATTA+TGG - chr3_2:75503763-75503782 Msa0425160:intron 30.0%
GCATTTCTATTCCAATTTGT+AGG - chr3_2:75503797-75503816 Msa0425160:intron 30.0%
TAATATGATGTATAACAGGG+AGG - chr3_2:75504129-75504148 Msa0425160:intron 30.0%
AATATGATGTATAACAGGGA+GGG - chr3_2:75504130-75504149 Msa0425160:intron 30.0%
! GATCTTTAGAAGGAAATTGT+TGG - chr3_2:75504160-75504179 Msa0425160:intron 30.0%
!!! TTTTTTGACCCTTCGATTTT+TGG - chr3_2:75504254-75504273 Msa0425160:CDS 30.0%
ATTGGTAAAAAGAAACTTCC+TGG - chr3_2:75504530-75504549 Msa0425160:intron 30.0%
ATAACTTTCTTGGAATCTTG+AGG + chr3_2:75504682-75504701 None:intergenic 30.0%
TCAAGATTCCAAGAAAGTTA+TGG - chr3_2:75504681-75504700 Msa0425160:CDS 30.0%
ACATGTAACCATAACTTTCT+TGG + chr3_2:75504692-75504711 None:intergenic 30.0%
AAATCACATTAAACCCATCA+AGG + chr3_2:75504735-75504754 None:intergenic 30.0%
TGTATGTAGGGATTTAACAA+AGG + chr3_2:75504777-75504796 None:intergenic 30.0%
GAAATCAACAAGTGTATGTA+GGG + chr3_2:75504789-75504808 None:intergenic 30.0%
AGGACTCTAATGTATATCTA+TGG - chr3_2:75504979-75504998 Msa0425160:CDS 30.0%
ATATCTATGGAACGTTAATC+AGG - chr3_2:75504992-75505011 Msa0425160:CDS 30.0%
CCTAACTTTCTTAGATTTCA+TGG + chr3_2:75505033-75505052 None:intergenic 30.0%
CCATGAAATCTAAGAAAGTT+AGG - chr3_2:75505030-75505049 Msa0425160:CDS 30.0%
TGTAATTGCATAACAACTTG+TGG + chr3_2:75505161-75505180 None:intergenic 30.0%
!!! TCTGAACCAAGATTTTTTCT+TGG - chr3_2:75505205-75505224 Msa0425160:CDS 30.0%
AAGACTCCAAGAAAAAATCT+TGG + chr3_2:75505214-75505233 None:intergenic 30.0%
!!! CAATGATGTTTTTTTGGTCT+TGG + chr3_2:75505288-75505307 None:intergenic 30.0%
AAGTCACACTTCATTTCAAA+CGG + chr3_2:75505447-75505466 None:intergenic 30.0%
ATCAAGATTCATTGCTTTGT+TGG - chr3_2:75505487-75505506 Msa0425160:CDS 30.0%
! TGTAGCATGTAGTTTTCTAA+AGG + chr3_2:75505522-75505541 None:intergenic 30.0%
ACTACATGCTACAAAGTTTA+TGG - chr3_2:75505529-75505548 Msa0425160:CDS 30.0%
TATCATGCGGTAATCAATTT+CGG + chr3_2:75505686-75505705 None:intergenic 30.0%
ATGTTAAATTTGGCAGCATA+AGG - chr3_2:75505755-75505774 Msa0425160:CDS 30.0%
ATAAGGTAACAAGCAATTTG+AGG - chr3_2:75505772-75505791 Msa0425160:CDS 30.0%
! TAATCTGATTTTCTTGCACA+TGG + chr3_2:75505804-75505823 None:intergenic 30.0%
GCAAGAAAATCAGATTATTG+AGG - chr3_2:75505807-75505826 Msa0425160:CDS 30.0%
! ATGACTTTGCATCTCTTTTA+GGG + chr3_2:75505946-75505965 None:intergenic 30.0%
!! AGACGATTTTGATATGTTGT+GGG - chr3_2:75505998-75506017 Msa0425160:five_prime_UTR 30.0%
CTTTCATCTTAGCAACTAAA+AGG + chr3_2:75506036-75506055 None:intergenic 30.0%
!! CTTTTAGTTGCTAAGATGAA+AGG - chr3_2:75506034-75506053 Msa0425160:intron 30.0%
CATGATCAATCAAAATGCTA+AGG - chr3_2:75506091-75506110 Msa0425160:intron 30.0%
ACAAGCAATGTGATTATGAT+CGG - chr3_2:75506257-75506276 Msa0425160:intron 30.0%
!!! TATTTTGTTGGTTTGCCTTT+TGG - chr3_2:75506472-75506491 Msa0425160:five_prime_UTR 30.0%
! TTCTATTTCTCTCAACCAAA+AGG + chr3_2:75506490-75506509 None:intergenic 30.0%
AAAGAGGAGGAAGCAAAAAT+GGG + chr3_2:75501919-75501938 None:intergenic 35.0%
ACAAACACGGAGATTGAAAA+CGG + chr3_2:75502111-75502130 None:intergenic 35.0%
CATACCTGGTTATTATGGAT+TGG - chr3_2:75502178-75502197 Msa0425160:three_prime_UTR 35.0%
!! TTATGGATTGGGATCTATGT+TGG - chr3_2:75502190-75502209 Msa0425160:three_prime_UTR 35.0%
!! TATGTTGGATTGGATTGGTT+TGG - chr3_2:75502205-75502224 Msa0425160:three_prime_UTR 35.0%
!!! GTAGTTTTTTATGATCTGGG+TGG - chr3_2:75502383-75502402 Msa0425160:three_prime_UTR 35.0%
!! AGTTTTTGTTTCCTTGAAGG+GGG - chr3_2:75502455-75502474 Msa0425160:three_prime_UTR 35.0%
AATCATATGGGTAGTTTCAG+TGG - chr3_2:75502500-75502519 Msa0425160:three_prime_UTR 35.0%
AAGAGGATGTTGTGTCTATT+AGG - chr3_2:75502552-75502571 Msa0425160:three_prime_UTR 35.0%
AGAGGATGTTGTGTCTATTA+GGG - chr3_2:75502553-75502572 Msa0425160:three_prime_UTR 35.0%
! TTCCGATGATGATGATAAAG+GGG - chr3_2:75502583-75502602 Msa0425160:three_prime_UTR 35.0%
GAAAGAAGAAGAGATAGTAG+TGG - chr3_2:75502758-75502777 Msa0425160:three_prime_UTR 35.0%
! AATAACTTGCCATCTCAAGA+TGG - chr3_2:75502869-75502888 Msa0425160:three_prime_UTR 35.0%
TCCAAATTTCCATCTTGAGA+TGG + chr3_2:75502881-75502900 None:intergenic 35.0%
GAGTGATTGTTCAAATCAGT+TGG - chr3_2:75502928-75502947 Msa0425160:three_prime_UTR 35.0%
!! AAATCAGTTGGTAGTTGCTA+AGG - chr3_2:75502940-75502959 Msa0425160:three_prime_UTR 35.0%
AGGATTGTGTAAATGTCTCT+GGG - chr3_2:75502969-75502988 Msa0425160:exon 35.0%
TGGTTACTAGAACGGTAAAT+AGG - chr3_2:75503047-75503066 Msa0425160:CDS 35.0%
GGTTACTAGAACGGTAAATA+GGG - chr3_2:75503048-75503067 Msa0425160:CDS 35.0%
AACTTTCATCGCTTTACTTG+AGG - chr3_2:75503206-75503225 Msa0425160:CDS 35.0%
ACCATGAAATTTAGTCCTGA+TGG - chr3_2:75503262-75503281 Msa0425160:CDS 35.0%
CCATGAAATTTAGTCCTGAT+GGG - chr3_2:75503263-75503282 Msa0425160:CDS 35.0%
ACGGTAAAGTAAATGCTTGA+GGG + chr3_2:75503385-75503404 None:intergenic 35.0%
GACACCATTGTTTATGGATA+AGG - chr3_2:75503423-75503442 Msa0425160:CDS 35.0%
TCCAATTTGTAGGCTTCTTT+AGG - chr3_2:75503807-75503826 Msa0425160:intron 35.0%
ACCTAAAGAAGCCTACAAAT+TGG + chr3_2:75503811-75503830 None:intergenic 35.0%
CTGTTGTGGTCAAACAAATT+AGG + chr3_2:75503839-75503858 None:intergenic 35.0%
AATTGTGAGATGAACTGTTG+TGG + chr3_2:75503853-75503872 None:intergenic 35.0%
! TTCATTAGTGGATCCATAGA+CGG - chr3_2:75503937-75503956 Msa0425160:intron 35.0%
TTAAATAATACCTGCCCATC+CGG + chr3_2:75504048-75504067 None:intergenic 35.0%
!! CAGAAGTACCAAAAATCGAA+GGG + chr3_2:75504265-75504284 None:intergenic 35.0%
!! TCAGAAGTACCAAAAATCGA+AGG + chr3_2:75504266-75504285 None:intergenic 35.0%
AATCACTTAAGACTTGAGCT+TGG - chr3_2:75504434-75504453 Msa0425160:CDS 35.0%
GATTCCCAACTATGCTTAAT+TGG - chr3_2:75504512-75504531 Msa0425160:CDS 35.0%
CGAAATCAACAAGTGTATGT+AGG + chr3_2:75504790-75504809 None:intergenic 35.0%
!! TTATTTTCAGGCCTTAACAC+AGG - chr3_2:75504900-75504919 Msa0425160:CDS 35.0%
TAAAATATGTTTCCCGTCTG+AGG + chr3_2:75504949-75504968 None:intergenic 35.0%
! ACATATTTTATCAGCATGCG+AGG - chr3_2:75504959-75504978 Msa0425160:CDS 35.0%
! AATTGTTCATTTTCGGTGAC+TGG + chr3_2:75505116-75505135 None:intergenic 35.0%
! TTTCTTGGAGTCTTTTCCAA+AGG - chr3_2:75505220-75505239 Msa0425160:CDS 35.0%
! TTCTTGGAGTCTTTTCCAAA+GGG - chr3_2:75505221-75505240 Msa0425160:CDS 35.0%
!!! TCGCAGCAATGATGTTTTTT+TGG + chr3_2:75505294-75505313 None:intergenic 35.0%
AGTCACACTTCATTTCAAAC+GGG + chr3_2:75505446-75505465 None:intergenic 35.0%
! AAGTGTGACTTTTCCTAAGT+TGG - chr3_2:75505456-75505475 Msa0425160:CDS 35.0%
AAATGATCCTGCGATTGATT+TGG + chr3_2:75505611-75505630 None:intergenic 35.0%
!! GTCATTGATTTGAGATCGAA+TGG + chr3_2:75505664-75505683 None:intergenic 35.0%
TTATTGAGGTCAATGACAAG+TGG - chr3_2:75505821-75505840 Msa0425160:CDS 35.0%
! TGACTTTGCATCTCTTTTAG+GGG + chr3_2:75505945-75505964 None:intergenic 35.0%
! CATGACTTTGCATCTCTTTT+AGG + chr3_2:75505947-75505966 None:intergenic 35.0%
!! GAGACGATTTTGATATGTTG+TGG - chr3_2:75505997-75506016 Msa0425160:five_prime_UTR 35.0%
! GCAACTAAAAGGGTTTTCAA+AGG + chr3_2:75506025-75506044 None:intergenic 35.0%
TTAGTTGCTAAGATGAAAGG+TGG - chr3_2:75506037-75506056 Msa0425160:intron 35.0%
GAGTTAAACTTGGAAATGTG+TGG - chr3_2:75506174-75506193 Msa0425160:intron 35.0%
!! GTGATTATGATCGGTTTTAG+TGG - chr3_2:75506266-75506285 Msa0425160:intron 35.0%
! CTGTACATGGTCTCAATTTT+AGG - chr3_2:75506358-75506377 Msa0425160:intron 35.0%
TAGTTGAGGTACAACTATGT+TGG - chr3_2:75506398-75506417 Msa0425160:intron 35.0%
!! GATATCTCTTTTTGGTCATC+AGG - chr3_2:75506534-75506553 Msa0425160:five_prime_UTR 35.0%
GCGAAAACGATGATACAAAG+TGG + chr3_2:75501885-75501904 None:intergenic 40.0%
GAAAGAGGAGGAAGCAAAAA+TGG + chr3_2:75501920-75501939 None:intergenic 40.0%
!! AGTGTTGTTGATGACGAAAG+AGG + chr3_2:75501935-75501954 None:intergenic 40.0%
GATCCCAATCCATAATAACC+AGG + chr3_2:75502185-75502204 None:intergenic 40.0%
GATTGGGATCTATGTTGGAT+TGG - chr3_2:75502195-75502214 Msa0425160:three_prime_UTR 40.0%
! GGATCTATGTTGGATTGGAT+TGG - chr3_2:75502200-75502219 Msa0425160:three_prime_UTR 40.0%
!! TTGGATTTTGACGCATTCCT+AGG - chr3_2:75502427-75502446 Msa0425160:three_prime_UTR 40.0%
TCAGTGGAGAAGAAGATTGT+CGG - chr3_2:75502516-75502535 Msa0425160:three_prime_UTR 40.0%
!!! TCGGTTTTTTGATGCTGAAG+AGG - chr3_2:75502535-75502554 Msa0425160:three_prime_UTR 40.0%
CACCCCTTTATCATCATCAT+CGG + chr3_2:75502588-75502607 None:intergenic 40.0%
!! AGATAGTAGTGGTTCTGAAG+AGG - chr3_2:75502769-75502788 Msa0425160:three_prime_UTR 40.0%
TTGCTCTAGTGTGAGTTCTT+CGG - chr3_2:75502823-75502842 Msa0425160:three_prime_UTR 40.0%
! TTCGGAGGAATTTGGTTTAG+TGG - chr3_2:75502841-75502860 Msa0425160:three_prime_UTR 40.0%
GCCATCTCAAGATGGAAATT+TGG - chr3_2:75502877-75502896 Msa0425160:three_prime_UTR 40.0%
GAGGATTGTGTAAATGTCTC+TGG - chr3_2:75502968-75502987 Msa0425160:exon 40.0%
GGATTGTGTAAATGTCTCTG+GGG - chr3_2:75502970-75502989 Msa0425160:exon 40.0%
! TGGTGATGTGGTTACTAGAA+CGG - chr3_2:75503039-75503058 Msa0425160:CDS 40.0%
GTGTAGGCTTCAGAAAGTAA+AGG - chr3_2:75503156-75503175 Msa0425160:CDS 40.0%
AAGTAAAGGTCCGTCAATGT+AGG - chr3_2:75503170-75503189 Msa0425160:CDS 40.0%
CCCATCAGGACTAAATTTCA+TGG + chr3_2:75503266-75503285 None:intergenic 40.0%
CGGTAAAGTAAATGCTTGAG+GGG + chr3_2:75503384-75503403 None:intergenic 40.0%
CACGGTAAAGTAAATGCTTG+AGG + chr3_2:75503386-75503405 None:intergenic 40.0%
AACAACACAAGCTGAATCTG+CGG + chr3_2:75503482-75503501 None:intergenic 40.0%
! GCAATGGTTTTTCCAACAAC+CGG + chr3_2:75503522-75503541 None:intergenic 40.0%
AAACTTCACTTCTATGCCCA+CGG + chr3_2:75503552-75503571 None:intergenic 40.0%
! TGGGCATAGAAGTGAAGTTT+TGG - chr3_2:75503552-75503571 Msa0425160:intron 40.0%
!!! GTGAAGTTTTGGATCTCTCT+TGG - chr3_2:75503563-75503582 Msa0425160:intron 40.0%
GTGAAAACACTTCCAAGCAA+TGG + chr3_2:75503753-75503772 None:intergenic 40.0%
CAATCAACAACCTGAGAATC+GGG + chr3_2:75503985-75504004 None:intergenic 40.0%
CCAATCAACAACCTGAGAAT+CGG + chr3_2:75503986-75504005 None:intergenic 40.0%
GGGATTGTTGGATCTTTAGA+AGG - chr3_2:75504150-75504169 Msa0425160:intron 40.0%
AAAAAGAAACTTCCTGGCAG+AGG - chr3_2:75504536-75504555 Msa0425160:intron 40.0%
AAAAGAAACTTCCTGGCAGA+GGG - chr3_2:75504537-75504556 Msa0425160:intron 40.0%
TCACAAGTCAGAATCCTTGA+TGG - chr3_2:75504718-75504737 Msa0425160:CDS 40.0%
CACAAGTCAGAATCCTTGAT+GGG - chr3_2:75504719-75504738 Msa0425160:CDS 40.0%
GAGGTAAATGATGCACACAT+TGG + chr3_2:75504930-75504949 None:intergenic 40.0%
TGTGCATCATTTACCTCAGA+CGG - chr3_2:75504933-75504952 Msa0425160:CDS 40.0%
! AGAAAGTTAGGTCTTGTGAG+CGG - chr3_2:75505042-75505061 Msa0425160:CDS 40.0%
AACATCATTGCTGCGAAAGT+CGG - chr3_2:75505298-75505317 Msa0425160:CDS 40.0%
ACTTCATTTCAAACGGGTAC+AGG + chr3_2:75505440-75505459 None:intergenic 40.0%
TCCAATTCCAAATCAATCGC+AGG - chr3_2:75505601-75505620 Msa0425160:CDS 40.0%
!! TCCTGCGATTGATTTGGAAT+TGG + chr3_2:75505605-75505624 None:intergenic 40.0%
TCGAATGGTTCAGATTGCAT+AGG + chr3_2:75505649-75505668 None:intergenic 40.0%
CCTGCACTTCAAATATCATG+CGG + chr3_2:75505699-75505718 None:intergenic 40.0%
! CGCATGATATTTGAAGTGCA+GGG - chr3_2:75505697-75505716 Msa0425160:CDS 40.0%
GAATCCTGGTCCAAAGTTTA+TGG - chr3_2:75505719-75505738 Msa0425160:CDS 40.0%
TCTCAAGCCTCCATAAACTT+TGG + chr3_2:75505732-75505751 None:intergenic 40.0%
GATCAAGACAAGCTAAAGCT+TGG + chr3_2:75505881-75505900 None:intergenic 40.0%
TTTGGTCCACAAGAATCTAC+TGG - chr3_2:75505919-75505938 Msa0425160:exon 40.0%
AAGGTGGAGATTTCAAGAGT+TGG - chr3_2:75506053-75506072 Msa0425160:intron 40.0%
! TGGAGATTTCAAGAGTTGGT+GGG - chr3_2:75506057-75506076 Msa0425160:intron 40.0%
GATCACATGGATGGCAAAAT+TGG + chr3_2:75506134-75506153 None:intergenic 40.0%
!! GTTGTTGATGACGAAAGAGG+AGG + chr3_2:75501932-75501951 None:intergenic 45.0%
AACACGGAGATTGAAAACGG+TGG + chr3_2:75502108-75502127 None:intergenic 45.0%
TTCCTTGAAGGGGGATTTCA+TGG - chr3_2:75502464-75502483 Msa0425160:three_prime_UTR 45.0%
TCCTTGAAGGGGGATTTCAT+GGG - chr3_2:75502465-75502484 Msa0425160:three_prime_UTR 45.0%
! AAAGAGTGTGAGAGAGCGTA+GGG - chr3_2:75502652-75502671 Msa0425160:three_prime_UTR 45.0%
! GGGAGGTTTATGAAGAGCAT+GGG - chr3_2:75502674-75502693 Msa0425160:three_prime_UTR 45.0%
GTGAGTTCTTCGGAGGAATT+TGG - chr3_2:75502833-75502852 Msa0425160:three_prime_UTR 45.0%
GGTAGTTGCTAAGGAATCTG+AGG - chr3_2:75502949-75502968 Msa0425160:three_prime_UTR 45.0%
AGAGAGTTTGAGGATGCAGA+TGG - chr3_2:75503019-75503038 Msa0425160:CDS 45.0%
AACGGTAAATAGGGCGAGAA+GGG - chr3_2:75503057-75503076 Msa0425160:CDS 45.0%
CAAGATATCCAAGCGCATGA+AGG - chr3_2:75503229-75503248 Msa0425160:CDS 45.0%
AAATTGCACCTTCATGCGCT+TGG + chr3_2:75503240-75503259 None:intergenic 45.0%
ATGCTTGAGGGGTCAATTTC+AGG + chr3_2:75503373-75503392 None:intergenic 45.0%
! TTTTCCCGCCTAAGATCTTC+CGG - chr3_2:75503500-75503519 Msa0425160:CDS 45.0%
AACAACCGGAAGATCTTAGG+CGG + chr3_2:75503508-75503527 None:intergenic 45.0%
TCCAACAACCGGAAGATCTT+AGG + chr3_2:75503511-75503530 None:intergenic 45.0%
AAACCATTGCATGAGTTCCG+TGG - chr3_2:75503532-75503551 Msa0425160:intron 45.0%
AACCATTGCATGAGTTCCGT+GGG - chr3_2:75503533-75503552 Msa0425160:intron 45.0%
CTGACAAAACTGTCCGACTA+TGG - chr3_2:75503713-75503732 Msa0425160:CDS 45.0%
CACGATTCACTTGCCATAGT+CGG + chr3_2:75503729-75503748 None:intergenic 45.0%
AGTGAATCGTGACCATTGCT+TGG - chr3_2:75503738-75503757 Msa0425160:CDS 45.0%
! TAGTGGATCCATAGACGGAA+AGG - chr3_2:75503942-75503961 Msa0425160:intron 45.0%
! CCGATTCTCAGGTTGTTGAT+TGG - chr3_2:75503983-75504002 Msa0425160:intron 45.0%
GACTGCAGTATGTTATCGAC+CGG - chr3_2:75504026-75504045 Msa0425160:intron 45.0%
CAGTATGTTATCGACCGGAT+GGG - chr3_2:75504031-75504050 Msa0425160:intron 45.0%
GTATAACAGGGAGGGATTGT+TGG - chr3_2:75504138-75504157 Msa0425160:intron 45.0%
GAGCTTGGTCCTAACATTTC+TGG - chr3_2:75504449-75504468 Msa0425160:CDS 45.0%
ACCAGATAATCACTTGCAGC+TGG - chr3_2:75504490-75504509 Msa0425160:CDS 45.0%
TCCAGCTGCAAGTGATTATC+TGG + chr3_2:75504494-75504513 None:intergenic 45.0%
ACATTGGACTGCCTGTGTTA+AGG + chr3_2:75504914-75504933 None:intergenic 45.0%
GTGCATCATTTACCTCAGAC+GGG - chr3_2:75504934-75504953 Msa0425160:CDS 45.0%
TTCCTCAAACGCATCAGTTG+CGG - chr3_2:75505067-75505086 Msa0425160:CDS 45.0%
! TGTTCATTTTCGGTGACTGG+AGG + chr3_2:75505113-75505132 None:intergenic 45.0%
TGGTTCAGAGAGAAAGAAGC+AGG + chr3_2:75505194-75505213 None:intergenic 45.0%
TACCAACAATGCTCATGCGT+GGG - chr3_2:75505352-75505371 Msa0425160:CDS 45.0%
! GTACAGGTAGCCCGTAATTT+TGG + chr3_2:75505424-75505443 None:intergenic 45.0%
! CCGCATGATATTTGAAGTGC+AGG - chr3_2:75505696-75505715 Msa0425160:CDS 45.0%
! ATTTGAAGTGCAGGGAATCC+TGG - chr3_2:75505705-75505724 Msa0425160:CDS 45.0%
TCCTGGTCCAAAGTTTATGG+AGG - chr3_2:75505722-75505741 Msa0425160:CDS 45.0%
GTGGAGATTTCAAGAGTTGG+TGG - chr3_2:75506056-75506075 Msa0425160:intron 45.0%
TTGCCATCCATGTGATCTTG+TGG - chr3_2:75506137-75506156 Msa0425160:intron 45.0%
CAAATGGCCACAAGATCACA+TGG + chr3_2:75506147-75506166 None:intergenic 45.0%
!!! TGTGTGGCAGTTGTTTTTGC+TGG - chr3_2:75506190-75506209 Msa0425160:intron 45.0%
AGTGGCTCGAAGTCTTTGTT+TGG - chr3_2:75506284-75506303 Msa0425160:intron 45.0%
ACCCATGAAATCCCCCTTCA+AGG + chr3_2:75502469-75502488 None:intergenic 50.0%
CTACGCTCTCTCACACTCTT+TGG + chr3_2:75502653-75502672 None:intergenic 50.0%
! CAAAGAGTGTGAGAGAGCGT+AGG - chr3_2:75502651-75502670 Msa0425160:three_prime_UTR 50.0%
! AAGAGTGTGAGAGAGCGTAG+GGG - chr3_2:75502653-75502672 Msa0425160:three_prime_UTR 50.0%
GGGGAGGTTTATGAAGAGCA+TGG - chr3_2:75502673-75502692 Msa0425160:three_prime_UTR 50.0%
CTCTAGTGTGAGTTCTTCGG+AGG - chr3_2:75502826-75502845 Msa0425160:three_prime_UTR 50.0%
! TCTGGGGTGTCTCATTGTCA+AGG - chr3_2:75502986-75503005 Msa0425160:CDS 50.0%
! TGAGGATGCAGATGGTGATG+TGG - chr3_2:75503027-75503046 Msa0425160:CDS 50.0%
GAACGGTAAATAGGGCGAGA+AGG - chr3_2:75503056-75503075 Msa0425160:CDS 50.0%
ACGGTAAATAGGGCGAGAAG+GGG - chr3_2:75503058-75503077 Msa0425160:CDS 50.0%
TAAATAGGGCGAGAAGGGGT+TGG - chr3_2:75503062-75503081 Msa0425160:CDS 50.0%
ATTGAGATCGATGACGTGCG+TGG - chr3_2:75503093-75503112 Msa0425160:CDS 50.0%
AAGGGAGCTATGCAGTCTCA+GGG - chr3_2:75503134-75503153 Msa0425160:CDS 50.0%
! TAGTCCTGATGGGCAGTATC+TGG - chr3_2:75503273-75503292 Msa0425160:CDS 50.0%
TGGCTACAGGTGGTGAAGAT+GGG - chr3_2:75503293-75503312 Msa0425160:CDS 50.0%
GTGGTGAAGATGGGGTTGTT+CGG - chr3_2:75503302-75503321 Msa0425160:CDS 50.0%
TGGTGAAGATGGGGTTGTTC+GGG - chr3_2:75503303-75503322 Msa0425160:CDS 50.0%
ACAACCGGAAGATCTTAGGC+GGG + chr3_2:75503507-75503526 None:intergenic 50.0%
GCCTAAGATCTTCCGGTTGT+TGG - chr3_2:75503507-75503526 Msa0425160:intron 50.0%
GCAGTATGTTATCGACCGGA+TGG - chr3_2:75504030-75504049 Msa0425160:intron 50.0%
!! CAGAGGGATAACTGGCTTTC+AGG - chr3_2:75504553-75504572 Msa0425160:intron 50.0%
TACCGCAACTGATGCGTTTG+AGG + chr3_2:75505072-75505091 None:intergenic 50.0%
AGAAAGAAGCAGGTGCGTTG+GGG + chr3_2:75505184-75505203 None:intergenic 50.0%
GAGAAAGAAGCAGGTGCGTT+GGG + chr3_2:75505185-75505204 None:intergenic 50.0%
AGAGAAAGAAGCAGGTGCGT+TGG + chr3_2:75505186-75505205 None:intergenic 50.0%
TTCCAAAGGGATCTGCAACC+TGG - chr3_2:75505234-75505253 Msa0425160:CDS 50.0%
GAAACAGGAAGCTTCTCCTC+GGG + chr3_2:75505260-75505279 None:intergenic 50.0%
CGAAACAGGAAGCTTCTCCT+CGG + chr3_2:75505261-75505280 None:intergenic 50.0%
CGAGGAGAAGCTTCCTGTTT+CGG - chr3_2:75505259-75505278 Msa0425160:CDS 50.0%
GAGGAGAAGCTTCCTGTTTC+GGG - chr3_2:75505260-75505279 Msa0425160:CDS 50.0%
GTACCAACAATGCTCATGCG+TGG - chr3_2:75505351-75505370 Msa0425160:CDS 50.0%
ACCAACAATGCTCATGCGTG+GGG - chr3_2:75505353-75505372 Msa0425160:CDS 50.0%
GGTATGGTCATTGTGACTGC+AGG - chr3_2:75505374-75505393 Msa0425160:CDS 50.0%
GCCTCCATAAACTTTGGACC+AGG + chr3_2:75505726-75505745 None:intergenic 50.0%
TAGGGGCCAGTAGATTCTTG+TGG + chr3_2:75505928-75505947 None:intergenic 50.0%
TGGCCACAAGATCACATGGA+TGG + chr3_2:75506143-75506162 None:intergenic 50.0%
! AGAGTGTGAGAGAGCGTAGG+GGG - chr3_2:75502654-75502673 Msa0425160:three_prime_UTR 55.0%
GAAGGGAGCTATGCAGTCTC+AGG - chr3_2:75503133-75503152 Msa0425160:CDS 55.0%
GCTATGCAGTCTCAGGGTGT+AGG - chr3_2:75503140-75503159 Msa0425160:CDS 55.0%
GTAGCCAGATACTGCCCATC+AGG + chr3_2:75503280-75503299 None:intergenic 55.0%
GATGGGCAGTATCTGGCTAC+AGG - chr3_2:75503280-75503299 Msa0425160:CDS 55.0%
CTGGCTACAGGTGGTGAAGA+TGG - chr3_2:75503292-75503311 Msa0425160:CDS 55.0%
GGCTACAGGTGGTGAAGATG+GGG - chr3_2:75503294-75503313 Msa0425160:CDS 55.0%
AAGATGGGGTTGTTCGGGTG+TGG - chr3_2:75503308-75503327 Msa0425160:CDS 55.0%
TGCCCACGGAACTCATGCAA+TGG + chr3_2:75503538-75503557 None:intergenic 55.0%
GATGCGCACCTTTCCGTCTA+TGG + chr3_2:75503953-75503972 None:intergenic 55.0%
! TAGACGGAAAGGTGCGCATC+TGG - chr3_2:75503953-75503972 Msa0425160:intron 55.0%
CTGGACGATACCCGATTCTC+AGG - chr3_2:75503972-75503991 Msa0425160:intron 55.0%
ATGTTATCGACCGGATGGGC+AGG - chr3_2:75504035-75504054 Msa0425160:intron 55.0%
CTTCCTGGCAGAGGGATAAC+TGG - chr3_2:75504545-75504564 Msa0425160:intron 55.0%
AAGCCAGTTATCCCTCTGCC+AGG + chr3_2:75504551-75504570 None:intergenic 55.0%
ACGCATCAGTTGCGGTACCT+TGG - chr3_2:75505075-75505094 Msa0425160:CDS 55.0%
TCAGTTGCGGTACCTTGGCA+CGG - chr3_2:75505080-75505099 Msa0425160:CDS 55.0%
GGAGGTTTCAAACCGTGCCA+AGG + chr3_2:75505095-75505114 None:intergenic 55.0%
!! TTGGTCTTGGAGCCCGAAAC+AGG + chr3_2:75505275-75505294 None:intergenic 55.0%
! ACCCCACGCATGAGCATTGT+TGG + chr3_2:75505357-75505376 None:intergenic 55.0%
CAATGCTCATGCGTGGGGTA+TGG - chr3_2:75505358-75505377 Msa0425160:CDS 55.0%
TGGTCATTGTGACTGCAGGC+TGG - chr3_2:75505378-75505397 Msa0425160:CDS 55.0%
GGTCATTGTGACTGCAGGCT+GGG - chr3_2:75505379-75505398 Msa0425160:CDS 55.0%
ATTGTGACTGCAGGCTGGGA+CGG - chr3_2:75505383-75505402 Msa0425160:CDS 55.0%
GGGCAGTATCTGGCTACAGG+TGG - chr3_2:75503283-75503302 Msa0425160:CDS 60.0%
GGTTGTTCGGGTGTGGCAAG+TGG - chr3_2:75503315-75503334 Msa0425160:CDS 60.0%
TCGGGTGTGGCAAGTGGTTG+AGG - chr3_2:75503321-75503340 Msa0425160:CDS 60.0%
GGTGTGGCAAGTGGTTGAGG+AGG - chr3_2:75503324-75503343 Msa0425160:CDS 60.0%
GGCCAGGTTGCAGATCCCTT+TGG + chr3_2:75505239-75505258 None:intergenic 60.0%
TTGTGACTGCAGGCTGGGAC+GGG - chr3_2:75505384-75505403 Msa0425160:CDS 60.0%
! GTGTGAGAGAGCGTAGGGGG+AGG - chr3_2:75502657-75502676 Msa0425160:three_prime_UTR 65.0%
AGGAAGCTTCTCCTCGGGCC+AGG + chr3_2:75505255-75505274 None:intergenic 65.0%
GGGATCTGCAACCTGGCCCG+AGG - chr3_2:75505241-75505260 Msa0425160:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 75501830 75506605 75501830 ID=Msa0425160;Name=Msa0425160
chr3_2 mRNA 75501830 75506605 75501830 ID=Msa0425160-mRNA-1;Parent=Msa0425160;Name=Msa0425160-mRNA-1;_AED=0.05;_eAED=0.05;_QI=294|1|1|1|0.85|0.75|8|1154|702
chr3_2 exon 75501830 75503525 75501830 ID=Msa0425160-mRNA-1:exon:19379;Parent=Msa0425160-mRNA-1
chr3_2 exon 75503669 75503762 75503669 ID=Msa0425160-mRNA-1:exon:19378;Parent=Msa0425160-mRNA-1
chr3_2 exon 75503861 75503940 75503861 ID=Msa0425160-mRNA-1:exon:19377;Parent=Msa0425160-mRNA-1
chr3_2 exon 75504237 75504288 75504237 ID=Msa0425160-mRNA-1:exon:19376;Parent=Msa0425160-mRNA-1
chr3_2 exon 75504379 75504536 75504379 ID=Msa0425160-mRNA-1:exon:19375;Parent=Msa0425160-mRNA-1
chr3_2 exon 75504651 75504741 75504651 ID=Msa0425160-mRNA-1:exon:19374;Parent=Msa0425160-mRNA-1
chr3_2 exon 75504838 75506048 75504838 ID=Msa0425160-mRNA-1:exon:19373;Parent=Msa0425160-mRNA-1
chr3_2 exon 75506431 75506605 75506431 ID=Msa0425160-mRNA-1:exon:19372;Parent=Msa0425160-mRNA-1
chr3_2 five_prime_UTR 75506431 75506605 75506431 ID=Msa0425160-mRNA-1:five_prime_utr;Parent=Msa0425160-mRNA-1
chr3_2 five_prime_UTR 75505930 75506048 75505930 ID=Msa0425160-mRNA-1:five_prime_utr;Parent=Msa0425160-mRNA-1
chr3_2 CDS 75504838 75505929 75504838 ID=Msa0425160-mRNA-1:cds;Parent=Msa0425160-mRNA-1
chr3_2 CDS 75504651 75504741 75504651 ID=Msa0425160-mRNA-1:cds;Parent=Msa0425160-mRNA-1
chr3_2 CDS 75504379 75504536 75504379 ID=Msa0425160-mRNA-1:cds;Parent=Msa0425160-mRNA-1
chr3_2 CDS 75504237 75504288 75504237 ID=Msa0425160-mRNA-1:cds;Parent=Msa0425160-mRNA-1
chr3_2 CDS 75503861 75503940 75503861 ID=Msa0425160-mRNA-1:cds;Parent=Msa0425160-mRNA-1
chr3_2 CDS 75503669 75503762 75503669 ID=Msa0425160-mRNA-1:cds;Parent=Msa0425160-mRNA-1
chr3_2 CDS 75502984 75503525 75502984 ID=Msa0425160-mRNA-1:cds;Parent=Msa0425160-mRNA-1
chr3_2 three_prime_UTR 75501830 75502983 75501830 ID=Msa0425160-mRNA-1:three_prime_utr;Parent=Msa0425160-mRNA-1
Gene Sequence

>Msa0425160

ATGGGTAGTTTCAGTGGAGAAGAAGATTGTCGGTTTTTTGATGCTGAAGAGGATGTTGTGTCTATTAGGGATGTAAATTCCGATGATGATGATAAAGGGGTGTCTGTGTCTGTTGATTTTGATTATGAAGTGTGGATTCGGAGTCCAAAGAGTGTGAGAGAGCGTAGGGGGAGGTTTATGAAGAGCATGGGAATGAGTGTAGATGAAATTGTAGTTGAAAATTCATTGGATTTTGAGAAGGAAGAGATTATGGAAAGAAGAAGAGATAGTAGTGGTTCTGAAGAGGAATTTAGTTCATGTCGGCTGTCAATGTCTTGTTGCTCTAGTGTGAGTTCTTCGGAGGAATTTGGTTTAGTGGATATTAATAACTTGCCATCTCAAGATGGAAATTTGGAGAAAAGAATGAGGGATAATGAGAAGATGAGTGATTGTTCAAATCAGTTGGTAGTTGCTAAGGAATCTGAGGATTGTGTAAATGTCTCTGGGGTGTCTCATTGTCAAGGATTGATAGATAGAGAGTTTGAGGATGCAGATGGTGATGTGGTTACTAGAACGGTAAATAGGGCGAGAAGGGGTTGGTTGAGAAGATTGAGATCGATGACGTGCGTGGTTGATAATGATAGAGAAGAAGGGAGCTATGCAGTCTCAGGGTGTAGGCTTCAGAAAGTAAAGGTCCGTCAATGTAGGAAGAAAATGAAGGAACTTTCATCGCTTTACTTGAGGCAAGATATCCAAGCGCATGAAGGTGCAATTTTGACCATGAAATTTAGTCCTGATGGGCAGTATCTGGCTACAGGTGGTGAAGATGGGGTTGTTCGGGTGTGGCAAGTGGTTGAGGAGGATAGATGTAATGAAATTCACATTCCTGAAATTGACCCCTCAAGCATTTACTTTACCGTGAATAATCTCTCTCAATTGACACCATTGTTTATGGATAAGGAAAAACTTGGTCAACTGAAGAGCATGAGAAAGACCGCAGATTCAGCTTGTGTTGTTTTCCCGCCTAAGATCTTCCGGTTGTTGGAAAAACCATTGCATGAGTTCCGTGGGCATAGAAGTGAAGTTTTGGATCTCTCTTGGTCAAAGAAGAATTATCTTCTTTCATCATCAGCTGACAAAACTGTCCGACTATGGCAAGTGAATCGTGACCATTGCTTGGAAGTGTTTTCACACAGTAATTATGTGACATGCATACAATTCAATCCTGTTGATGAAGATTATTTCATTAGTGGATCCATAGACGGAAAGGTGCGCATCTGGACGATACCCGATTCTCAGGTTGTTGATTGGACTGATGTCAGAGACATAGTGACTGCAGTATGTTATCGACCGGATGGGCAGGGAGGGATTGTTGGATCTTTAGAAGGAAATTGTTGGTTTTATAAAATATCAGATAATCACTTGCAGCTGGATTCCCAACTATGCTTAATTGGTAAAAAGAAACTTCCTGGCAGAGGGATAACTGGCTTTCAGTTTCTTCCTCAAGATTCCAAGAAAGTTATGGTTACATGTGCTGATTCACAAGTCAGAATCCTTGATGGGTTTAATGTGATTTGTAAATACAAAAGCCTTAACACAGGCAGTCCAATGTGTGCATCATTTACCTCAGACGGGAAACATATTTTATCAGCATGCGAGGACTCTAATGTATATCTATGGAACGTTAATCAGGAAGAGTCTAATAACCCCATGAAATCTAAGAAAGTTAGGTCTTGTGAGCGGTTTTCCTCAAACGCATCAGTTGCGGTACCTTGGCACGGTTTGAAACCTCCAGTCACCGAAAATGAACAATTGAATGTCTTGAATAAAAAGTCACCACAAGTTGTTATGCAATTACACCCCAACGCACCTGCTTCTTTCTCTCTGAACCAAGATTTTTTCTTGGAGTCTTTTCCAAAGGGATCTGCAACCTGGCCCGAGGAGAAGCTTCCTGTTTCGGGCTCCAAGACCAAAAAAACATCATTGCTGCGAAAGTCGGAATACAAATTCTTGAAATCTTCATGTAAGAGTACCAACAATGCTCATGCGTGGGGTATGGTCATTGTGACTGCAGGCTGGGACGGGAAGATAAAAACATTCCAAAATTACGGGCTACCTGTACCCGTTTGA
Protein sequence

>Msa0425160

MGSFSGEEDCRFFDAEEDVVSIRDVNSDDDDKGVSVSVDFDYEVWIRSPKSVRERRGRFMKSMGMSVDEIVVENSLDFEKEEIMERRRDSSGSEEEFSSCRLSMSCCSSVSSSEEFGLVDINNLPSQDGNLEKRMRDNEKMSDCSNQLVVAKESEDCVNVSGVSHCQGLIDREFEDADGDVVTRTVNRARRGWLRRLRSMTCVVDNDREEGSYAVSGCRLQKVKVRQCRKKMKELSSLYLRQDIQAHEGAILTMKFSPDGQYLATGGEDGVVRVWQVVEEDRCNEIHIPEIDPSSIYFTVNNLSQLTPLFMDKEKLGQLKSMRKTADSACVVFPPKIFRLLEKPLHEFRGHRSEVLDLSWSKKNYLLSSSADKTVRLWQVNRDHCLEVFSHSNYVTCIQFNPVDEDYFISGSIDGKVRIWTIPDSQVVDWTDVRDIVTAVCYRPDGQGGIVGSLEGNCWFYKISDNHLQLDSQLCLIGKKKLPGRGITGFQFLPQDSKKVMVTCADSQVRILDGFNVICKYKSLNTGSPMCASFTSDGKHILSACEDSNVYLWNVNQEESNNPMKSKKVRSCERFSSNASVAVPWHGLKPPVTENEQLNVLNKKSPQVVMQLHPNAPASFSLNQDFFLESFPKGSATWPEEKLPVSGSKTKKTSLLRKSEYKFLKSSCKSTNNAHAWGMVIVTAGWDGKIKTFQNYGLPVPV*