AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0866660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0866660 MtrunA17_Chr3g0127171 95.461 705 29 1 1 705 1 702 0.0 1355
Msa0866660 MtrunA17_Chr1g0146771 61.433 726 238 15 1 703 1 707 0.0 837
Msa0866660 MtrunA17_Chr8g0388841 43.094 724 365 15 11 705 9 714 0.0 543
Msa0866660 MtrunA17_Chr8g0384061 38.484 673 323 17 46 703 47 643 2.17e-127 392
Msa0866660 MtrunA17_Chr2g0317931 42.593 540 248 12 209 705 338 858 9.88e-125 391
Msa0866660 MtrunA17_Chr3g0129821 43.685 483 244 7 225 703 168 626 5.96e-116 362
Msa0866660 MtrunA17_Chr7g0238321 46.565 393 193 6 206 588 381 766 2.98e-93 310
Msa0866660 MtrunA17_Chr4g0067151 29.075 227 145 9 343 562 66 283 1.66e-19 90.5
Msa0866660 MtrunA17_Chr4g0067151 27.350 234 140 9 243 464 19 234 9.38e-13 70.1
Msa0866660 MtrunA17_Chr1g0185501 25.833 240 158 9 330 562 48 274 1.10e-18 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0866660 AT5G24320.1 46.741 721 320 16 11 705 12 694 0.0 592
Msa0866660 AT5G24320.2 46.759 725 318 17 11 705 12 698 0.0 591
Msa0866660 AT5G53500.2 47.207 716 301 15 1 703 1 652 0.0 583
Msa0866660 AT5G53500.1 47.207 716 301 15 1 703 1 652 0.0 583
Msa0866660 AT5G42010.1 48.496 532 240 13 191 705 195 709 9.33e-164 488
Msa0866660 AT1G64610.2 49.240 526 221 12 189 705 159 647 1.74e-158 473
Msa0866660 AT1G64610.1 49.240 526 221 12 189 705 159 647 1.74e-158 473
Msa0866660 AT5G42010.2 54.118 340 151 4 191 525 195 534 6.23e-126 386
Msa0866660 AT5G54200.1 44.643 504 239 12 224 703 336 823 2.98e-122 384
Msa0866660 AT3G15470.1 42.495 513 249 12 224 705 386 883 1.71e-118 376
Msa0866660 AT1G48870.2 40.816 490 225 11 216 702 163 590 5.63e-104 330
Msa0866660 AT1G48870.3 40.816 490 225 11 216 702 163 590 5.63e-104 330
Msa0866660 AT1G48870.1 40.816 490 225 11 216 702 163 590 5.63e-104 330
Msa0866660 AT5G02430.1 39.884 519 265 13 224 702 384 895 1.27e-95 316
Msa0866660 AT2G37670.2 40.038 522 261 13 226 702 380 894 1.48e-92 308
Msa0866660 AT2G37670.1 40.038 522 261 13 226 702 379 893 1.48e-92 308
Msa0866660 AT3G49660.1 23.385 325 176 12 245 562 18 276 7.30e-18 85.9
Msa0866660 AT4G02730.1 29.224 219 138 10 348 558 78 287 4.92e-17 83.6
Msa0866660 AT2G16405.1 25.214 234 159 4 343 560 202 435 2.25e-14 76.6
Msa0866660 AT5G67320.1 24.691 243 142 9 243 449 357 594 1.57e-11 68.2

Find 230 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTGACACCATTGTTTA+TGG 0.074372 5_4:-68482602 Msa0866660:CDS
ACTACATGCTACAAAGTTTA+TGG 0.160182 5_4:-68480492 Msa0866660:three_prime_UTR
GATTCCCAACTATGCTTAAT+TGG 0.172014 5_4:-68481507 Msa0866660:CDS
CAGAGGGATAACTGGCTTTC+AGG 0.188767 5_4:-68481466 Msa0866660:intron
ATGCTTGAGGGGTCAATTTC+AGG 0.194762 5_4:+68482649 None:intergenic
CTTTCATCTTAGCAACTAAA+AGG 0.214674 5_4:+68479980 None:intergenic
CTTGAGAATGATGTTAAATT+TGG 0.227107 5_4:-68480276 Msa0866660:three_prime_UTR
AAGAGGATGTTGTGTCTATT+AGG 0.227175 5_4:-68483476 Msa0866660:CDS
GAGGAGAAGCTTCCTGTTTC+GGG 0.230139 5_4:-68480761 Msa0866660:CDS
CGAGGAGAAGCTTCCTGTTT+CGG 0.236200 5_4:-68480762 Msa0866660:CDS
TTGATCTTAAAGTCTTAATT+AGG 0.237629 5_4:-68480126 Msa0866660:three_prime_UTR
GTACAGGTAGCCCGTAATTT+TGG 0.245270 5_4:+68480600 None:intergenic
GCCATCTCAAGATGGAAATT+TGG 0.253348 5_4:-68483142 Msa0866660:CDS
ACATGTAACCATAACTTTCT+TGG 0.275795 5_4:+68481330 None:intergenic
TGGTTACTAGAACGGTAAAT+AGG 0.280748 5_4:-68482972 Msa0866660:CDS
AGAGTGTGTGTTTGAAAATT+AGG 0.282450 5_4:+68484066 None:intergenic
CCTAACTTTCTTAGATTTCA+TGG 0.283800 5_4:+68480991 None:intergenic
GAGAAAGAAGCAGGTGGGTT+GGG 0.287380 5_4:+68480839 None:intergenic
TCCAACAACCGGAAGATCTT+AGG 0.295299 5_4:+68482511 None:intergenic
GATCACATGGATGGCAAAAT+TGG 0.299956 5_4:+68479882 None:intergenic
TTAAAGTCTTAATTAGGTTT+TGG 0.300005 5_4:-68480120 Msa0866660:three_prime_UTR
GAATCCTGGTCCAAAGTTTA+TGG 0.301176 5_4:-68480302 Msa0866660:three_prime_UTR
GATGCGCACCTTTCCGTCTA+TGG 0.305937 5_4:+68482069 None:intergenic
AAATGATCCTGCGATTGATT+TGG 0.309802 5_4:+68480413 None:intergenic
GTGAGTTCTTCGGAGGAATT+TGG 0.313989 5_4:-68483186 Msa0866660:CDS
CTACGCTCTCTCACACTCTT+TGG 0.324124 5_4:+68483369 None:intergenic
GATGAAGATTATTTCATTAG+TGG 0.325769 5_4:-68482094 Msa0866660:CDS
GGGATTGTTGGATCTTTAGA+AGG 0.327630 5_4:-68481869 Msa0866660:CDS
GTGGTGAAGATGGGGTTGTT+CGG 0.332946 5_4:-68482717 Msa0866660:CDS
ATCAAGATTCATTGCTTTGT+TGG 0.334144 5_4:-68480534 Msa0866660:three_prime_UTR
GACACCATTGTTTATGGATA+AGG 0.339226 5_4:-68482596 Msa0866660:CDS
CTTCCTGGCAGAGGGATAAC+TGG 0.340161 5_4:-68481474 Msa0866660:CDS
TTGTTGTAATGTAATGTAAA+TGG 0.346787 5_4:-68480166 Msa0866660:three_prime_UTR
TGGTGAAGATGGGGTTGTTC+GGG 0.350996 5_4:-68482716 Msa0866660:CDS
GTTGTACCTCAACTAATTAA+AGG 0.353915 5_4:+68479623 None:intergenic
ATTGATAGATAGAGAGTTTG+AGG 0.355153 5_4:-68483010 Msa0866660:CDS
TTCGGAGGAATTTGGTTTAG+TGG 0.361491 5_4:-68483178 Msa0866660:CDS
AGGACTCTAATGTATATCTA+TGG 0.364797 5_4:-68481042 Msa0866660:CDS
TAGTCCTGATGGGCAGTATC+TGG 0.368035 5_4:-68482746 Msa0866660:CDS
GAGGATTGTGTAAATGTCTC+TGG 0.370035 5_4:-68483051 Msa0866660:CDS
TATGTAAGTGTATATATATA+TGG 0.372070 5_4:+68484174 None:intergenic
TATCATGCGGTAATCAATTT+CGG 0.373903 5_4:+68480338 None:intergenic
TGGGCATAGAAGTGAAGTTT+TGG 0.376344 5_4:-68482467 Msa0866660:CDS
TAGACGGAAAGGTGCGCATC+TGG 0.381026 5_4:-68482066 Msa0866660:CDS
CCGATTCTCAGGTTGTTGAT+TGG 0.381470 5_4:-68482036 Msa0866660:CDS
GCCTAAGATCTTCCGGTTGT+TGG 0.381485 5_4:-68482512 Msa0866660:CDS
CCATGAAATCTAAGAAAGTT+AGG 0.382192 5_4:-68480991 Msa0866660:CDS
GAAGGGAGCTATGCAGTCTC+AGG 0.387775 5_4:-68482886 Msa0866660:CDS
CTTGTGGCCATTTGTACAAA+AGG 0.391331 5_4:-68479860 Msa0866660:three_prime_UTR
ATGAAATAATCTTCATCAAC+AGG 0.393624 5_4:+68482100 None:intergenic
CTGACAAAACTGTCCGACTA+TGG 0.394030 5_4:-68482306 Msa0866660:CDS
GTTGATAATGATAGAGAAGA+AGG 0.394764 5_4:-68482904 Msa0866660:CDS
TATGTAGTTGTTTATGATCT+GGG 0.398384 5_4:-68483648 Msa0866660:intron
TTGCTCTAGTGTGAGTTCTT+CGG 0.402105 5_4:-68483196 Msa0866660:CDS
AGAAAGAAGCAGGTGGGTTG+GGG 0.408797 5_4:+68480840 None:intergenic
TCAAGATTCCAAGAAAGTTA+TGG 0.411964 5_4:-68481338 Msa0866660:CDS
CTGGCTACAGGTGGTGAAGA+TGG 0.415140 5_4:-68482727 Msa0866660:CDS
TCCTGCGATTGATTTGGAAT+TGG 0.416200 5_4:+68480419 None:intergenic
TTGATTATGAAGTGTGGATT+CGG 0.416684 5_4:-68483395 Msa0866660:CDS
ATGTTAAATTTGGCAGCATA+AGG 0.417388 5_4:-68480266 Msa0866660:three_prime_UTR
TTGGTCTTGGAGCCCGAAAC+AGG 0.417453 5_4:+68480749 None:intergenic
GCGGTCTTTCTCATGCTCTT+CGG 0.420033 5_4:+68482559 None:intergenic
AAGTCACACTTCATTTCAAA+CGG 0.422322 5_4:+68480577 None:intergenic
GGTTACTAGAACGGTAAATA+GGG 0.425943 5_4:-68482971 Msa0866660:CDS
AGTGGCTCGAAGTCTTTGTT+TGG 0.426122 5_4:-68479729 Msa0866660:three_prime_UTR
TTCCAAAGGGATCTGCAACC+TGG 0.426271 5_4:-68480787 Msa0866660:CDS
ATATCTATGGAACGTTAATC+AGG 0.429417 5_4:-68481029 Msa0866660:CDS
GGCCAGGTTGCAGATCCCTT+TGG 0.430320 5_4:+68480785 None:intergenic
ACCCCACGCATGAGCATTGT+TGG 0.432490 5_4:+68480667 None:intergenic
TTTACCAATTAAGCATAGTT+GGG 0.432871 5_4:+68481503 None:intergenic
TCTCAAGCCTCCATAAACTT+TGG 0.434188 5_4:+68480292 None:intergenic
TTCTATTTCTCTCAACCAAA+AGG 0.435095 5_4:+68479526 None:intergenic
CTGGACGATACCCGATTCTC+AGG 0.435686 5_4:-68482047 Msa0866660:CDS
CCCATCAGGACTAAATTTCA+TGG 0.436002 5_4:+68482756 None:intergenic
TTAAATAATACCTGCCCATC+CGG 0.437117 5_4:+68481974 None:intergenic
CCGCATGATATTTGAAGTGC+AGG 0.437193 5_4:-68480325 Msa0866660:three_prime_UTR
CCAATCAACAACCTGAGAAT+CGG 0.440688 5_4:+68482036 None:intergenic
ATATGTAGTTGTTTATGATC+TGG 0.444024 5_4:-68483649 Msa0866660:intron
ATTTGAAGTGCAGGGAATCC+TGG 0.454134 5_4:-68480316 Msa0866660:three_prime_UTR
GTATAACAGGGAGGGATTGT+TGG 0.454570 5_4:-68481881 Msa0866660:intron
TGGTCATTGTGACTGCAGGC+TGG 0.456531 5_4:-68480643 Msa0866660:CDS
AAATTGCACCTTCATGCGCT+TGG 0.462786 5_4:+68482782 None:intergenic
TTTCATCTTAGCAACTAAAA+GGG 0.466148 5_4:+68479981 None:intergenic
ACCATGAAATTTAGTCCTGA+TGG 0.466588 5_4:-68482757 Msa0866660:CDS
TCGGGTGTGGCAAGTGGTTG+AGG 0.469415 5_4:-68482698 Msa0866660:CDS
TACCGCAACTGATGCGTTTG+AGG 0.470561 5_4:+68480952 None:intergenic
CAATGCTCATGCGTGGGGTA+TGG 0.470834 5_4:-68480663 Msa0866660:CDS
CTAACTTTCTTAGATTTCAT+GGG 0.472148 5_4:+68480992 None:intergenic
TAGGGGCCAGTAGATTCTTG+TGG 0.472471 5_4:+68480096 None:intergenic
GATCTTTAGAAGGAAATTGT+TGG 0.473234 5_4:-68481859 Msa0866660:CDS
TGGCTACAGGTGGTGAAGAT+GGG 0.475427 5_4:-68482726 Msa0866660:CDS
GTAGCCAGATACTGCCCATC+AGG 0.476689 5_4:+68482742 None:intergenic
TCACAAGTCAGAATCCTTGA+TGG 0.477119 5_4:-68481301 Msa0866660:CDS
AGGATTGTGTAAATGTCTCT+GGG 0.480040 5_4:-68483050 Msa0866660:CDS
ACATTGGACTGCCTGTGTTA+AGG 0.480580 5_4:+68481110 None:intergenic
TTGTGACTGCAGGCTGGGAC+GGG 0.481187 5_4:-68480637 Msa0866660:CDS
AGAGGATGTTGTGTCTATTA+GGG 0.481348 5_4:-68483475 Msa0866660:CDS
GTGTGAGAGAGCGTAGGAGG+AGG 0.484269 5_4:-68483362 Msa0866660:CDS
AAGATGGGGTTGTTCGGGTG+TGG 0.485043 5_4:-68482711 Msa0866660:CDS
GATGGGCAGTATCTGGCTAC+AGG 0.486225 5_4:-68482739 Msa0866660:CDS
TTGTACAAAAGGGTTAAACT+TGG 0.488189 5_4:-68479849 Msa0866660:three_prime_UTR
AGGAAGCTTCTCCTCGGGCC+AGG 0.488808 5_4:+68480769 None:intergenic
AACGGTAAATAGGGCGAGAA+GGG 0.489976 5_4:-68482962 Msa0866660:CDS
ATTGTGACTGCAGGCTGGGA+CGG 0.490386 5_4:-68480638 Msa0866660:CDS
CAACTAATTAAAGGTGATGT+TGG 0.490683 5_4:+68479632 None:intergenic
CAATCAACAACCTGAGAATC+GGG 0.492398 5_4:+68482037 None:intergenic
AAATCAGTTGGTAGTTGCTA+AGG 0.492824 5_4:-68483079 Msa0866660:CDS
AGAGAAAGAAGCAGGTGGGT+TGG 0.493090 5_4:+68480838 None:intergenic
ATGTAAGTGTATATATATAT+GGG 0.493647 5_4:+68484175 None:intergenic
CATGATCAATCAAAATGCTA+AGG 0.496976 5_4:-68479922 Msa0866660:three_prime_UTR
ACTTCATTTCAAACGGGTAC+AGG 0.498608 5_4:+68480584 None:intergenic
ACCAGATAATCACTTGCAGC+TGG 0.500109 5_4:-68481529 Msa0866660:intron
GAAACAGGAAGCTTCTCCTC+GGG 0.503691 5_4:+68480764 None:intergenic
CGAAACAGGAAGCTTCTCCT+CGG 0.504206 5_4:+68480763 None:intergenic
AGTCACACTTCATTTCAAAC+GGG 0.505736 5_4:+68480578 None:intergenic
TCCAAATTTCCATCTTGAGA+TGG 0.506574 5_4:+68483141 None:intergenic
GAGGAGGTTTATGAAGAGCA+TGG 0.509035 5_4:-68483346 Msa0866660:CDS
ACTGTAAAGTAAATGCTTGA+GGG 0.510241 5_4:+68482637 None:intergenic
AACATCATTGCTGCGAAAGT+CGG 0.511514 5_4:-68480723 Msa0866660:CDS
TTACAAATTTACATCAAATG+AGG 0.512209 5_4:+68479587 None:intergenic
AGTGAATCGTGACCATTGCT+TGG 0.512373 5_4:-68482281 Msa0866660:CDS
ATAAGGTAACAAGCAATTTG+AGG 0.514159 5_4:-68480249 Msa0866660:three_prime_UTR
ACGCATCAGTTGCGGTACCT+TGG 0.514857 5_4:-68480946 Msa0866660:CDS
GAAATTTGGAGAAAAGAATG+AGG 0.519213 5_4:-68483128 Msa0866660:CDS
TTCATTAGTGGATCCATAGA+CGG 0.522706 5_4:-68482082 Msa0866660:CDS
AACTTTCATCGCTTTACTTG+AGG 0.524102 5_4:-68482813 Msa0866660:CDS
ATGTTATCGACCGGATGGGC+AGG 0.526250 5_4:-68481984 Msa0866660:intron
AATCATATGGGTAGTTTCAG+TGG 0.527946 5_4:-68483528 Msa0866660:exon
TTGATAATGATAGAGAAGAA+GGG 0.528008 5_4:-68482903 Msa0866660:CDS
TTGTGGCCATTTGTACAAAA+GGG 0.529199 5_4:-68479859 Msa0866660:three_prime_UTR
TCAGTGGAGAAGAAGATTGT+CGG 0.529362 5_4:-68483512 Msa0866660:CDS
TAAATAGGGCGAGAAGGGGT+TGG 0.531097 5_4:-68482957 Msa0866660:CDS
AGATAGTAGTGGTTCTGAAG+AGG 0.531135 5_4:-68483250 Msa0866660:CDS
AGGAGGTTTATGAAGAGCAT+GGG 0.535423 5_4:-68483345 Msa0866660:CDS
TTTGGTCCACAAGAATCTAC+TGG 0.536692 5_4:-68480102 Msa0866660:three_prime_UTR
CACTGTAAAGTAAATGCTTG+AGG 0.537714 5_4:+68482636 None:intergenic
GCTATGCAGTCTCAGGGTGT+AGG 0.538360 5_4:-68482879 Msa0866660:CDS
GTCATTGATTTGAGATCGAA+CGG 0.538995 5_4:+68480360 None:intergenic
ATAACTTTCTTGGAATCTTG+AGG 0.539357 5_4:+68481340 None:intergenic
AAATCACATTAAGCCCATCA+AGG 0.539545 5_4:+68481287 None:intergenic
GACTGCAGTATGTTATCGAC+CGG 0.543308 5_4:-68481993 Msa0866660:CDS
AGAGAGTTTGAGGATGCAGA+TGG 0.543559 5_4:-68483000 Msa0866660:CDS
TCTGGGGTGTCTCATTGTCA+AGG 0.544039 5_4:-68483033 Msa0866660:CDS
TTGATATGTTGTGGGACCAT+GGG 0.546377 5_4:-68480015 Msa0866660:three_prime_UTR
ACAAGCAATGTGATTATGAT+CGG 0.546669 5_4:-68479756 Msa0866660:three_prime_UTR
AAGTAAAGGTCCGTCAATGT+AGG 0.547509 5_4:-68482849 Msa0866660:CDS
TGTGCATCATTTACCTCAGA+CGG 0.548187 5_4:-68481088 Msa0866660:CDS
GGTATGGTCATTGTGACTGC+AGG 0.549386 5_4:-68480647 Msa0866660:CDS
GCCTCCATAAACTTTGGACC+AGG 0.549976 5_4:+68480298 None:intergenic
ATGATCAATCAAAATGCTAA+GGG 0.550174 5_4:-68479921 Msa0866660:three_prime_UTR
CCATGAAATTTAGTCCTGAT+GGG 0.550381 5_4:-68482756 Msa0866660:CDS
TGGTTCAGAGAGAAAGAAGC+AGG 0.550963 5_4:+68480830 None:intergenic
TTCCTCAAACGCATCAGTTG+CGG 0.553600 5_4:-68480954 Msa0866660:CDS
GATCAAGACAAGCTAAAGCT+TGG 0.556012 5_4:+68480143 None:intergenic
TCCAATTCCAAATCAATCGC+AGG 0.556225 5_4:-68480420 Msa0866660:three_prime_UTR
GGTCATTGTGACTGCAGGCT+GGG 0.557152 5_4:-68480642 Msa0866660:CDS
AGAGTGTGAGAGAGCGTAGG+AGG 0.559566 5_4:-68483365 Msa0866660:CDS
GTGGAGATTTCAAGAGTTGG+TGG 0.560027 5_4:-68479957 Msa0866660:three_prime_UTR
CACAAGTCAGAATCCTTGAT+GGG 0.560457 5_4:-68481300 Msa0866660:CDS
GAGTGATTGTTCAAATCAGT+TGG 0.560983 5_4:-68483091 Msa0866660:CDS
TAAAATATGTTTCCCGTCTG+AGG 0.561223 5_4:+68481075 None:intergenic
TACCAACAATGCTCATGCGT+GGG 0.562604 5_4:-68480669 Msa0866660:CDS
GGTTGTTCGGGTGTGGCAAG+TGG 0.564414 5_4:-68482704 Msa0866660:CDS
GCAGTATGTTATCGACCGGA+TGG 0.565468 5_4:-68481989 Msa0866660:CDS
ACATCACCTTTAATTAGTTG+AGG 0.571689 5_4:-68479629 Msa0866660:three_prime_UTR
TTGCCATCCATGTGATCTTG+TGG 0.572237 5_4:-68479876 Msa0866660:three_prime_UTR
CACGATTCACTTGCCATAGT+CGG 0.575462 5_4:+68482293 None:intergenic
AACCATTGCATGAGTTCCGT+GGG 0.575505 5_4:-68482486 Msa0866660:CDS
GAACGGTAAATAGGGCGAGA+AGG 0.577669 5_4:-68482963 Msa0866660:CDS
AAGGTGGAGATTTCAAGAGT+TGG 0.578139 5_4:-68479960 Msa0866660:three_prime_UTR
GCAAGAAAATCAGATTATTG+AGG 0.578747 5_4:-68480214 Msa0866660:three_prime_UTR
AAAAGAAACTTCCTGGCAGA+GGG 0.579638 5_4:-68481482 Msa0866660:CDS
TTAGTTGCTAAGATGAAAGG+TGG 0.581942 5_4:-68479976 Msa0866660:three_prime_UTR
CAAATGGCCACAAGATCACA+TGG 0.582600 5_4:+68479869 None:intergenic
CTCTAGTGTGAGTTCTTCGG+AGG 0.585376 5_4:-68483193 Msa0866660:CDS
AAGCCAGTTATCCCTCTGCC+AGG 0.589263 5_4:+68481471 None:intergenic
AAACCATTGCATGAGTTCCG+TGG 0.589350 5_4:-68482487 Msa0866660:CDS
GGCTACAGGTGGTGAAGATG+GGG 0.590519 5_4:-68482725 Msa0866660:CDS
TAGTTGAGGTACAACTATGT+TGG 0.590934 5_4:-68479615 Msa0866660:three_prime_UTR
GTTGTTGATGACGAAAGAGG+AGG 0.591914 5_4:+68484097 None:intergenic
CAAGATATCCAAGCGCATGA+AGG 0.592474 5_4:-68482790 Msa0866660:CDS
CTGTAAAGTAAATGCTTGAG+GGG 0.592786 5_4:+68482638 None:intergenic
GAAAGAAGAAGAGATAGTAG+TGG 0.594074 5_4:-68483261 Msa0866660:CDS
TGGTGATGTGGTTACTAGAA+CGG 0.595840 5_4:-68482980 Msa0866660:CDS
AATAACTTGCCATCTCAAGA+TGG 0.595950 5_4:-68483150 Msa0866660:CDS
GGTAGTTGCTAAGGAATCTG+AGG 0.598779 5_4:-68483070 Msa0866660:CDS
AAACTTCACTTCTATGCCCA+CGG 0.602774 5_4:+68482470 None:intergenic
GTGTAGGCTTCAGAAAGTAA+AGG 0.602811 5_4:-68482863 Msa0866660:CDS
GTGCATCATTTACCTCAGAC+GGG 0.603220 5_4:-68481087 Msa0866660:CDS
GAGGTAAATGATGCACACAT+TGG 0.603566 5_4:+68481094 None:intergenic
TAGTGGATCCATAGACGGAA+AGG 0.604269 5_4:-68482077 Msa0866660:CDS
TTTGATATGTTGTGGGACCA+TGG 0.605088 5_4:-68480016 Msa0866660:three_prime_UTR
TAACTTTCTTAGATTTCATG+GGG 0.605262 5_4:+68480993 None:intergenic
AAGAGGAATTTAGTTCATGT+CGG 0.608009 5_4:-68483233 Msa0866660:CDS
AGTGTTGTTGATGACGAAAG+AGG 0.608136 5_4:+68484094 None:intergenic
GTGAAAACACTTCCAAGCAA+TGG 0.611173 5_4:+68482269 None:intergenic
TGCCCACGGAACTCATGCAA+TGG 0.612153 5_4:+68482484 None:intergenic
AAATTTGGAGAAAAGAATGA+GGG 0.614888 5_4:-68483127 Msa0866660:CDS
CAGTATGTTATCGACCGGAT+GGG 0.618616 5_4:-68481988 Msa0866660:CDS
CAAAGAGTGTGAGAGAGCGT+AGG 0.619829 5_4:-68483368 Msa0866660:CDS
CGCATGATATTTGAAGTGCA+GGG 0.625837 5_4:-68480324 Msa0866660:three_prime_UTR
TGGCCACAAGATCACATGGA+TGG 0.626291 5_4:+68479873 None:intergenic
TCAGTTGCGGTACCTTGGCA+CGG 0.626640 5_4:-68480941 Msa0866660:CDS
TTCAGAGAGAAAGAAGCAGG+TGG 0.627337 5_4:+68480833 None:intergenic
ACAACCGGAAGATCTTAGGC+GGG 0.627533 5_4:+68482515 None:intergenic
TCCTGGTCCAAAGTTTATGG+AGG 0.631110 5_4:-68480299 Msa0866660:three_prime_UTR
AACAACACAAGCTGAATCTG+CGG 0.632119 5_4:+68482540 None:intergenic
TCAATGTAGGAAGAAAATGA+AGG 0.633828 5_4:-68482836 Msa0866660:CDS
GTACCAACAATGCTCATGCG+TGG 0.637345 5_4:-68480670 Msa0866660:CDS
GGGTTAAACTTGGAAATGTG+TGG 0.640914 5_4:-68479839 Msa0866660:three_prime_UTR
TCAGAGAGAAAGAAGCAGGT+GGG 0.641323 5_4:+68480834 None:intergenic
GGAGGTTTCAAACCGTGCCA+AGG 0.641872 5_4:+68480929 None:intergenic
TGAGGATGCAGATGGTGATG+TGG 0.643720 5_4:-68482992 Msa0866660:CDS
AACAACCGGAAGATCTTAGG+CGG 0.646128 5_4:+68482514 None:intergenic
TCGAACGGTTCATATTGCAT+AGG 0.647522 5_4:+68480375 None:intergenic
GCGAAAACGATGATACAAAG+TGG 0.648362 5_4:+68484144 None:intergenic
AAGGGAGCTATGCAGTCTCA+GGG 0.648697 5_4:-68482885 Msa0866660:CDS
GGGATCTGCAACCTGGCCCG+AGG 0.648859 5_4:-68480780 Msa0866660:CDS
ACCAACAATGCTCATGCGTG+GGG 0.652027 5_4:-68480668 Msa0866660:CDS
GTAGTTGTTTATGATCTGGG+TGG 0.661232 5_4:-68483645 Msa0866660:intron
TGTAATTGCATAACAACTTG+TGG 0.663052 5_4:+68480863 None:intergenic
TTATTGAGGTCAATGACAAG+TGG 0.665714 5_4:-68480200 Msa0866660:three_prime_UTR
GGTGTGGCAAGTGGTTGAGG+AGG 0.668449 5_4:-68482695 Msa0866660:CDS
ACGGTAAATAGGGCGAGAAG+GGG 0.672129 5_4:-68482961 Msa0866660:CDS
AGAAAGTTAGGTCTTGTGAG+CGG 0.675224 5_4:-68480979 Msa0866660:CDS
TGTAAGTGTATATATATATG+GGG 0.692974 5_4:+68484176 None:intergenic
CCTGCACTTCAAATATCATG+CGG 0.697949 5_4:+68480325 None:intergenic
GGGCAGTATCTGGCTACAGG+TGG 0.702356 5_4:-68482736 Msa0866660:CDS
GGATTGTGTAAATGTCTCTG+GGG 0.731454 5_4:-68483049 Msa0866660:CDS
ATTGAGATTGATGACGTGCG+TGG 0.740580 5_4:-68482926 Msa0866660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTAAGTGTATATATATAT+GGG + chr5_4:68479452-68479471 None:intergenic 15.0%
!! TATGTAAGTGTATATATATA+TGG + chr5_4:68479453-68479472 None:intergenic 15.0%
!! GAAAATAAAAAAAACAAACA+CGG + chr5_4:68479720-68479739 None:intergenic 15.0%
!!! TTTATTATATTTGCTGATAT+TGG - chr5_4:68479930-68479949 Msa0866660:three_prime_UTR 15.0%
!! TTGAACTTAAAAAATCATAT+GGG - chr5_4:68480084-68480103 Msa0866660:three_prime_UTR 15.0%
!! AAAATAACTTAAATGGAATA+TGG + chr5_4:68481843-68481862 None:intergenic 15.0%
!!! GTTTTAATAATCAAAATGTT+AGG - chr5_4:68481901-68481920 Msa0866660:intron 15.0%
!! AAATGTTAATCAAGTTATAT+TGG - chr5_4:68481980-68481999 Msa0866660:intron 15.0%
!! AATGTTAATCAAGTTATATT+GGG - chr5_4:68481981-68482000 Msa0866660:intron 15.0%
!! ATAAAAACATTCCAAAATTA+CGG - chr5_4:68483013-68483032 Msa0866660:CDS 15.0%
!!! AAGTAATAGTAATATTTTGT+TGG - chr5_4:68484071-68484090 Msa0866660:five_prime_UTR 15.0%
!! TGTAAGTGTATATATATATG+GGG + chr5_4:68479451-68479470 None:intergenic 20.0%
!! GTTGAACTTAAAAAATCATA+TGG - chr5_4:68480083-68480102 Msa0866660:three_prime_UTR 20.0%
!!! AAATTCATTGTATTTTGAGA+AGG - chr5_4:68480329-68480348 Msa0866660:three_prime_UTR 20.0%
!! GAATAATATGATGTATAACA+GGG - chr5_4:68481731-68481750 Msa0866660:intron 20.0%
!!! TGTTGGTTTTATAAAATATC+AGG - chr5_4:68481782-68481801 Msa0866660:intron 20.0%
!! AGGTCAAAAAATAACTTAAA+TGG + chr5_4:68481850-68481869 None:intergenic 20.0%
!!! ATAACTTGATTAACATTTTG+CGG + chr5_4:68481978-68481997 None:intergenic 20.0%
!!! AGAATACTATCTAAAATTTG+AGG + chr5_4:68482419-68482438 None:intergenic 20.0%
!!! GTTCATTACATTTTATTTTC+AGG - chr5_4:68482491-68482510 Msa0866660:CDS 20.0%
!! TAAAAACATTCCAAAATTAC+GGG - chr5_4:68483014-68483033 Msa0866660:CDS 20.0%
!! TTGTTGTAATGTAATGTAAA+TGG - chr5_4:68483458-68483477 Msa0866660:CDS 20.0%
!! TTGATCTTAAAGTCTTAATT+AGG - chr5_4:68483498-68483517 Msa0866660:CDS 20.0%
!!! TTAAAGTCTTAATTAGGTTT+TGG - chr5_4:68483504-68483523 Msa0866660:CDS 20.0%
!! TAACAAAAATATTCTGTACA+TGG - chr5_4:68483956-68483975 Msa0866660:intron 20.0%
!! TTACAAATTTACATCAAATG+AGG + chr5_4:68484040-68484059 None:intergenic 20.0%
!! AAAGGGTATGAATAAATTGT+TGG + chr5_4:68479655-68479674 None:intergenic 25.0%
!! TCTTCTTTTTATATCATACC+TGG - chr5_4:68479760-68479779 Msa0866660:three_prime_UTR 25.0%
! TATATCATACCTGGTTATTA+TGG - chr5_4:68479769-68479788 Msa0866660:three_prime_UTR 25.0%
! TTATTACTTTCTTTGTTCTG+TGG - chr5_4:68479863-68479882 Msa0866660:three_prime_UTR 25.0%
! ATATGTAGTTGTTTATGATC+TGG - chr5_4:68479975-68479994 Msa0866660:three_prime_UTR 25.0%
! TATGTAGTTGTTTATGATCT+GGG - chr5_4:68479976-68479995 Msa0866660:three_prime_UTR 25.0%
! TCGTTTGAAGAGATAAAAAT+TGG - chr5_4:68480004-68480023 Msa0866660:three_prime_UTR 25.0%
!!! TTAAGTTTTTGTTTCCTTGA+AGG - chr5_4:68480048-68480067 Msa0866660:three_prime_UTR 25.0%
!!! TAAGTTTTTGTTTCCTTGAA+GGG - chr5_4:68480049-68480068 Msa0866660:three_prime_UTR 25.0%
!! ATGATGATGATGATGATAAA+GGG - chr5_4:68480187-68480206 Msa0866660:three_prime_UTR 25.0%
!!! TTGATTTTGATTATGAAGTG+TGG - chr5_4:68480223-68480242 Msa0866660:three_prime_UTR 25.0%
! AAATTTGGAGAAAAGAATGA+GGG - chr5_4:68480497-68480516 Msa0866660:three_prime_UTR 25.0%
!!! TTGATAATGATAGAGAAGAA+GGG - chr5_4:68480721-68480740 Msa0866660:CDS 25.0%
!! TTTTCCTTATCCATAAACAA+TGG + chr5_4:68481035-68481054 None:intergenic 25.0%
! TTTATGGATAAGGAAAAACT+TGG - chr5_4:68481038-68481057 Msa0866660:CDS 25.0%
!! CACAATTTGTTTGTATTTGA+TGG - chr5_4:68481471-68481490 Msa0866660:CDS 25.0%
! ATGAAATAATCTTCATCAAC+AGG + chr5_4:68481527-68481546 None:intergenic 25.0%
! GATGAAGATTATTTCATTAG+TGG - chr5_4:68481530-68481549 Msa0866660:intron 25.0%
! AAGCACATGTTTAAATTGAA+TGG + chr5_4:68481689-68481708 None:intergenic 25.0%
! TTTAAACATGTGCTTTATAG+AGG - chr5_4:68481694-68481713 Msa0866660:intron 25.0%
! CGAATAATATGATGTATAAC+AGG - chr5_4:68481730-68481749 Msa0866660:intron 25.0%
! AATGGAATATGGAGATATAT+GGG + chr5_4:68481832-68481851 None:intergenic 25.0%
! AAATGGAATATGGAGATATA+TGG + chr5_4:68481833-68481852 None:intergenic 25.0%
!!! TTTTTTGACCTTTCGATTTT+TGG - chr5_4:68481859-68481878 Msa0866660:CDS 25.0%
! TACTTCTTATTCAAAATCTG+TGG + chr5_4:68481940-68481959 None:intergenic 25.0%
! AATTGAAAACCAGAAATGTT+AGG + chr5_4:68482066-68482085 None:intergenic 25.0%
! TTTACCAATTAAGCATAGTT+GGG + chr5_4:68482124-68482143 None:intergenic 25.0%
!! TTTTACCAATTAAGCATAGT+TGG + chr5_4:68482125-68482144 None:intergenic 25.0%
!! CTTTTTCTCTGACAATTTTT+TGG - chr5_4:68482224-68482243 Msa0866660:intron 25.0%
! AATTATATGTTCTGTCACTA+AGG - chr5_4:68482469-68482488 Msa0866660:CDS 25.0%
! TAACTTTCTTAGATTTCATG+GGG + chr5_4:68482634-68482653 None:intergenic 25.0%
! CTAACTTTCTTAGATTTCAT+GGG + chr5_4:68482635-68482654 None:intergenic 25.0%
!! GACATTCAATTGTTCATTTT+CGG + chr5_4:68482726-68482745 None:intergenic 25.0%
!! TTGATTCTATTTTCCAACTT+AGG + chr5_4:68483075-68483094 None:intergenic 25.0%
! CTTGAGAATGATGTTAAATT+TGG - chr5_4:68483348-68483367 Msa0866660:CDS 25.0%
! ATGTGTTAAAAAAACTTGCA+AGG - chr5_4:68483567-68483586 Msa0866660:five_prime_UTR 25.0%
! TGTGTTAAAAAAACTTGCAA+GGG - chr5_4:68483568-68483587 Msa0866660:five_prime_UTR 25.0%
!! TATCAAAATCGTCTCTTTTA+GGG + chr5_4:68483595-68483614 None:intergenic 25.0%
!! ATATCAAAATCGTCTCTTTT+AGG + chr5_4:68483596-68483615 None:intergenic 25.0%
! TTTCATCTTAGCAACTAAAA+GGG + chr5_4:68483646-68483665 None:intergenic 25.0%
! ATGATCAATCAAAATGCTAA+GGG - chr5_4:68483703-68483722 Msa0866660:intron 25.0%
!! TCAATGATGATATCTCTTTT+TGG - chr5_4:68484137-68484156 Msa0866660:five_prime_UTR 25.0%
AGAGTGTGTGTTTGAAAATT+AGG + chr5_4:68479561-68479580 None:intergenic 30.0%
GGTATGAATAAATTGTTGGA+AGG + chr5_4:68479651-68479670 None:intergenic 30.0%
TAAAAGCTGTGAAGACAAAA+GGG + chr5_4:68479672-68479691 None:intergenic 30.0%
TTAAAAGCTGTGAAGACAAA+AGG + chr5_4:68479673-68479692 None:intergenic 30.0%
ATACCTGGTTATTATGGATT+GGG - chr5_4:68479775-68479794 Msa0866660:three_prime_UTR 30.0%
!! TTGGTTTGGTTTGAATCTAT+CGG - chr5_4:68479815-68479834 Msa0866660:three_prime_UTR 30.0%
GAAACAAAAACTTAAGTCCT+AGG + chr5_4:68480043-68480062 None:intergenic 30.0%
!! AAGTTTTTGTTTCCTTGAAG+GGG - chr5_4:68480050-68480069 Msa0866660:three_prime_UTR 30.0%
ATCATCATCATCATCATCAT+CGG + chr5_4:68480184-68480203 None:intergenic 30.0%
! GATGATGATGATGATGATAA+AGG - chr5_4:68480186-68480205 Msa0866660:three_prime_UTR 30.0%
! TGATGATGATGATGATAAAG+GGG - chr5_4:68480188-68480207 Msa0866660:three_prime_UTR 30.0%
TTGATTATGAAGTGTGGATT+CGG - chr5_4:68480229-68480248 Msa0866660:three_prime_UTR 30.0%
!! TTTTGAGAAGGAAGAGATTA+TGG - chr5_4:68480341-68480360 Msa0866660:three_prime_UTR 30.0%
! AAGAGGAATTTAGTTCATGT+CGG - chr5_4:68480391-68480410 Msa0866660:three_prime_UTR 30.0%
GAAATTTGGAGAAAAGAATG+AGG - chr5_4:68480496-68480515 Msa0866660:three_prime_UTR 30.0%
ATTGATAGATAGAGAGTTTG+AGG - chr5_4:68480614-68480633 Msa0866660:CDS 30.0%
!! GTTGATAATGATAGAGAAGA+AGG - chr5_4:68480720-68480739 Msa0866660:CDS 30.0%
! TCATTTTCTTCCTACATTGA+CGG + chr5_4:68480788-68480807 None:intergenic 30.0%
TCAATGTAGGAAGAAAATGA+AGG - chr5_4:68480788-68480807 Msa0866660:CDS 30.0%
ACTGTAAAGTAAATGCTTGA+GGG + chr5_4:68480990-68481009 None:intergenic 30.0%
TCAATTGACACCATTGTTTA+TGG - chr5_4:68481022-68481041 Msa0866660:CDS 30.0%
AAGAAGATACTGCATTCAAA+AGG + chr5_4:68481288-68481307 None:intergenic 30.0%
! GTGTTTTCACACAGTAATTA+TGG - chr5_4:68481368-68481387 Msa0866660:intron 30.0%
TAATATGATGTATAACAGGG+AGG - chr5_4:68481734-68481753 Msa0866660:intron 30.0%
AATATGATGTATAACAGGGA+GGG - chr5_4:68481735-68481754 Msa0866660:intron 30.0%
! GATCTTTAGAAGGAAATTGT+TGG - chr5_4:68481765-68481784 Msa0866660:intron 30.0%
ATTGGTAAAAAGAAACTTCC+TGG - chr5_4:68482135-68482154 Msa0866660:intron 30.0%
ATAACTTTCTTGGAATCTTG+AGG + chr5_4:68482287-68482306 None:intergenic 30.0%
TCAAGATTCCAAGAAAGTTA+TGG - chr5_4:68482286-68482305 Msa0866660:CDS 30.0%
ACATGTAACCATAACTTTCT+TGG + chr5_4:68482297-68482316 None:intergenic 30.0%
AGTATGTAGGGATTTAACAA+AGG + chr5_4:68482382-68482401 None:intergenic 30.0%
AGGACTCTAATGTATATCTA+TGG - chr5_4:68482582-68482601 Msa0866660:CDS 30.0%
ATATCTATGGAACGTTAATC+AGG - chr5_4:68482595-68482614 Msa0866660:CDS 30.0%
CCTAACTTTCTTAGATTTCA+TGG + chr5_4:68482636-68482655 None:intergenic 30.0%
CCATGAAATCTAAGAAAGTT+AGG - chr5_4:68482633-68482652 Msa0866660:CDS 30.0%
TGTAATTGCATAACAACTTG+TGG + chr5_4:68482764-68482783 None:intergenic 30.0%
!!! TCTGAACCAAGATTTTTTCT+TGG - chr5_4:68482808-68482827 Msa0866660:CDS 30.0%
AAGACTCCAAGAAAAAATCT+TGG + chr5_4:68482817-68482836 None:intergenic 30.0%
!!! CAATGATGTTTTTTTGGTCT+TGG + chr5_4:68482891-68482910 None:intergenic 30.0%
AAGTCACACTTCATTTCAAA+CGG + chr5_4:68483050-68483069 None:intergenic 30.0%
ATCAAGATTCATTGCTTTGT+TGG - chr5_4:68483090-68483109 Msa0866660:CDS 30.0%
! TGTAGCATGTAGTTTTCTAA+AGG + chr5_4:68483125-68483144 None:intergenic 30.0%
ACTACATGCTACAAAGTTTA+TGG - chr5_4:68483132-68483151 Msa0866660:CDS 30.0%
TATCATGCGGTAATCAATTT+CGG + chr5_4:68483289-68483308 None:intergenic 30.0%
ATGTTAAATTTGGCAGCATA+AGG - chr5_4:68483358-68483377 Msa0866660:CDS 30.0%
ATAAGGTAACAAGCAATTTG+AGG - chr5_4:68483375-68483394 Msa0866660:CDS 30.0%
! TAATCTGATTTTCTTGCACA+TGG + chr5_4:68483407-68483426 None:intergenic 30.0%
GCAAGAAAATCAGATTATTG+AGG - chr5_4:68483410-68483429 Msa0866660:CDS 30.0%
! ATGACTTTGCATCTCTTTTA+GGG + chr5_4:68483549-68483568 None:intergenic 30.0%
!! AGACGATTTTGATATGTTGT+GGG - chr5_4:68483601-68483620 Msa0866660:five_prime_UTR 30.0%
CTTTCATCTTAGCAACTAAA+AGG + chr5_4:68483647-68483666 None:intergenic 30.0%
!! CTTTTAGTTGCTAAGATGAA+AGG - chr5_4:68483645-68483664 Msa0866660:intron 30.0%
CATGATCAATCAAAATGCTA+AGG - chr5_4:68483702-68483721 Msa0866660:intron 30.0%
! GTTTAACCCTTTTGTACAAA+TGG + chr5_4:68483774-68483793 None:intergenic 30.0%
TTGTACAAAAGGGTTAAACT+TGG - chr5_4:68483775-68483794 Msa0866660:intron 30.0%
ACAAGCAATGTGATTATGAT+CGG - chr5_4:68483868-68483887 Msa0866660:intron 30.0%
CAACTAATTAAAGGTGATGT+TGG + chr5_4:68483995-68484014 None:intergenic 30.0%
ACATCACCTTTAATTAGTTG+AGG - chr5_4:68483995-68484014 Msa0866660:intron 30.0%
GTTGTACCTCAACTAATTAA+AGG + chr5_4:68484004-68484023 None:intergenic 30.0%
!!! TATTTTGTTGGTTTGCCTTT+TGG - chr5_4:68484083-68484102 Msa0866660:five_prime_UTR 30.0%
! TTCTATTTCTCTCAACCAAA+AGG + chr5_4:68484101-68484120 None:intergenic 30.0%
AAAGAGGAGGAAGCAAAAAT+GGG + chr5_4:68479517-68479536 None:intergenic 35.0%
ACAAACACGGAGATTGAAAA+CGG + chr5_4:68479707-68479726 None:intergenic 35.0%
CATACCTGGTTATTATGGAT+TGG - chr5_4:68479774-68479793 Msa0866660:three_prime_UTR 35.0%
!! TTATGGATTGGGATCTATGT+TGG - chr5_4:68479786-68479805 Msa0866660:three_prime_UTR 35.0%
!! TATGTTGGATTGGATTGGTT+TGG - chr5_4:68479801-68479820 Msa0866660:three_prime_UTR 35.0%
!! AGTTTTTGTTTCCTTGAAGG+GGG - chr5_4:68480051-68480070 Msa0866660:three_prime_UTR 35.0%
AATCATATGGGTAGTTTCAG+TGG - chr5_4:68480096-68480115 Msa0866660:three_prime_UTR 35.0%
AAGAGGATGTTGTGTCTATT+AGG - chr5_4:68480148-68480167 Msa0866660:three_prime_UTR 35.0%
AGAGGATGTTGTGTCTATTA+GGG - chr5_4:68480149-68480168 Msa0866660:three_prime_UTR 35.0%
GAAAGAAGAAGAGATAGTAG+TGG - chr5_4:68480363-68480382 Msa0866660:three_prime_UTR 35.0%
! AATAACTTGCCATCTCAAGA+TGG - chr5_4:68480474-68480493 Msa0866660:three_prime_UTR 35.0%
TCCAAATTTCCATCTTGAGA+TGG + chr5_4:68480486-68480505 None:intergenic 35.0%
GAGTGATTGTTCAAATCAGT+TGG - chr5_4:68480533-68480552 Msa0866660:three_prime_UTR 35.0%
!! AAATCAGTTGGTAGTTGCTA+AGG - chr5_4:68480545-68480564 Msa0866660:three_prime_UTR 35.0%
AGGATTGTGTAAATGTCTCT+GGG - chr5_4:68480574-68480593 Msa0866660:exon 35.0%
TGGTTACTAGAACGGTAAAT+AGG - chr5_4:68480652-68480671 Msa0866660:CDS 35.0%
GGTTACTAGAACGGTAAATA+GGG - chr5_4:68480653-68480672 Msa0866660:CDS 35.0%
AACTTTCATCGCTTTACTTG+AGG - chr5_4:68480811-68480830 Msa0866660:CDS 35.0%
ACCATGAAATTTAGTCCTGA+TGG - chr5_4:68480867-68480886 Msa0866660:CDS 35.0%
CCATGAAATTTAGTCCTGAT+GGG - chr5_4:68480868-68480887 Msa0866660:CDS 35.0%
CTGTAAAGTAAATGCTTGAG+GGG + chr5_4:68480989-68481008 None:intergenic 35.0%
CACTGTAAAGTAAATGCTTG+AGG + chr5_4:68480991-68481010 None:intergenic 35.0%
GACACCATTGTTTATGGATA+AGG - chr5_4:68481028-68481047 Msa0866660:CDS 35.0%
! GCATTTCTATTCCGATTTGT+AGG - chr5_4:68481402-68481421 Msa0866660:intron 35.0%
ACCTAAAGAAGCCTACAAAT+CGG + chr5_4:68481416-68481435 None:intergenic 35.0%
CTGTTGTGGTCAAACAAATT+AGG + chr5_4:68481444-68481463 None:intergenic 35.0%
AATTGTGAGATGAACTGTTG+TGG + chr5_4:68481458-68481477 None:intergenic 35.0%
! TTCATTAGTGGATCCATAGA+CGG - chr5_4:68481542-68481561 Msa0866660:intron 35.0%
TTAAATAATACCTGCCCATC+CGG + chr5_4:68481653-68481672 None:intergenic 35.0%
!! CAGAAGTACCAAAAATCGAA+AGG + chr5_4:68481870-68481889 None:intergenic 35.0%
AATCACTTAAGACTTGAGCT+TGG - chr5_4:68482039-68482058 Msa0866660:CDS 35.0%
GATTCCCAACTATGCTTAAT+TGG - chr5_4:68482117-68482136 Msa0866660:CDS 35.0%
AAATCACATTAAGCCCATCA+AGG + chr5_4:68482340-68482359 None:intergenic 35.0%
GCGAAATCAACAAGTATGTA+GGG + chr5_4:68482394-68482413 None:intergenic 35.0%
TGCGAAATCAACAAGTATGT+AGG + chr5_4:68482395-68482414 None:intergenic 35.0%
!! TTATTTTCAGGCCTTAACAC+AGG - chr5_4:68482503-68482522 Msa0866660:CDS 35.0%
TAAAATATGTTTCCCGTCTG+AGG + chr5_4:68482552-68482571 None:intergenic 35.0%
! ACATATTTTATCAGCATGCG+AGG - chr5_4:68482562-68482581 Msa0866660:CDS 35.0%
! AATTGTTCATTTTCGGTGAC+TGG + chr5_4:68482719-68482738 None:intergenic 35.0%
! TTTCTTGGAGTCTTTTCCAA+AGG - chr5_4:68482823-68482842 Msa0866660:CDS 35.0%
! TTCTTGGAGTCTTTTCCAAA+GGG - chr5_4:68482824-68482843 Msa0866660:CDS 35.0%
!!! TCGCAGCAATGATGTTTTTT+TGG + chr5_4:68482897-68482916 None:intergenic 35.0%
AGTCACACTTCATTTCAAAC+GGG + chr5_4:68483049-68483068 None:intergenic 35.0%
! AAGTGTGACTTTTCCTAAGT+TGG - chr5_4:68483059-68483078 Msa0866660:CDS 35.0%
AAATGATCCTGCGATTGATT+TGG + chr5_4:68483214-68483233 None:intergenic 35.0%
!! GTCATTGATTTGAGATCGAA+CGG + chr5_4:68483267-68483286 None:intergenic 35.0%
TTATTGAGGTCAATGACAAG+TGG - chr5_4:68483424-68483443 Msa0866660:CDS 35.0%
! TGACTTTGCATCTCTTTTAG+GGG + chr5_4:68483548-68483567 None:intergenic 35.0%
! CATGACTTTGCATCTCTTTT+AGG + chr5_4:68483550-68483569 None:intergenic 35.0%
!! GAGACGATTTTGATATGTTG+TGG - chr5_4:68483600-68483619 Msa0866660:five_prime_UTR 35.0%
! GCAACTAAAAGGGTTTTCAA+AGG + chr5_4:68483636-68483655 None:intergenic 35.0%
TTAGTTGCTAAGATGAAAGG+TGG - chr5_4:68483648-68483667 Msa0866660:intron 35.0%
TTGTGGCCATTTGTACAAAA+GGG - chr5_4:68483765-68483784 Msa0866660:intron 35.0%
!! GTGATTATGATCGGTTTTAG+TGG - chr5_4:68483877-68483896 Msa0866660:intron 35.0%
! CTGTACATGGTCTCAATTTT+AGG - chr5_4:68483969-68483988 Msa0866660:intron 35.0%
TAGTTGAGGTACAACTATGT+TGG - chr5_4:68484009-68484028 Msa0866660:intron 35.0%
!! GATATCTCTTTTTGGTCATC+AGG - chr5_4:68484145-68484164 Msa0866660:five_prime_UTR 35.0%
GCGAAAACGATGATACAAAG+TGG + chr5_4:68479483-68479502 None:intergenic 40.0%
GAAAGAGGAGGAAGCAAAAA+TGG + chr5_4:68479518-68479537 None:intergenic 40.0%
!! AGTGTTGTTGATGACGAAAG+AGG + chr5_4:68479533-68479552 None:intergenic 40.0%
GATCCCAATCCATAATAACC+AGG + chr5_4:68479781-68479800 None:intergenic 40.0%
GATTGGGATCTATGTTGGAT+TGG - chr5_4:68479791-68479810 Msa0866660:three_prime_UTR 40.0%
! GGATCTATGTTGGATTGGAT+TGG - chr5_4:68479796-68479815 Msa0866660:three_prime_UTR 40.0%
GTAGTTGTTTATGATCTGGG+TGG - chr5_4:68479979-68479998 Msa0866660:three_prime_UTR 40.0%
!! TTGGATTTTGACGCATTCCT+AGG - chr5_4:68480023-68480042 Msa0866660:three_prime_UTR 40.0%
TCAGTGGAGAAGAAGATTGT+CGG - chr5_4:68480112-68480131 Msa0866660:three_prime_UTR 40.0%
!!! TCGGTTTTTTGATGCTGAAG+AGG - chr5_4:68480131-68480150 Msa0866660:three_prime_UTR 40.0%
! AGGAGGTTTATGAAGAGCAT+GGG - chr5_4:68480279-68480298 Msa0866660:three_prime_UTR 40.0%
!! AGATAGTAGTGGTTCTGAAG+AGG - chr5_4:68480374-68480393 Msa0866660:three_prime_UTR 40.0%
TTGCTCTAGTGTGAGTTCTT+CGG - chr5_4:68480428-68480447 Msa0866660:three_prime_UTR 40.0%
! TTCGGAGGAATTTGGTTTAG+TGG - chr5_4:68480446-68480465 Msa0866660:three_prime_UTR 40.0%
GCCATCTCAAGATGGAAATT+TGG - chr5_4:68480482-68480501 Msa0866660:three_prime_UTR 40.0%
GAGGATTGTGTAAATGTCTC+TGG - chr5_4:68480573-68480592 Msa0866660:exon 40.0%
GGATTGTGTAAATGTCTCTG+GGG - chr5_4:68480575-68480594 Msa0866660:exon 40.0%
! TGGTGATGTGGTTACTAGAA+CGG - chr5_4:68480644-68480663 Msa0866660:CDS 40.0%
GTGTAGGCTTCAGAAAGTAA+AGG - chr5_4:68480761-68480780 Msa0866660:CDS 40.0%
AAGTAAAGGTCCGTCAATGT+AGG - chr5_4:68480775-68480794 Msa0866660:CDS 40.0%
CCCATCAGGACTAAATTTCA+TGG + chr5_4:68480871-68480890 None:intergenic 40.0%
AACAACACAAGCTGAATCTG+CGG + chr5_4:68481087-68481106 None:intergenic 40.0%
! GCAATGGTTTTTCCAACAAC+CGG + chr5_4:68481127-68481146 None:intergenic 40.0%
AAACTTCACTTCTATGCCCA+CGG + chr5_4:68481157-68481176 None:intergenic 40.0%
! TGGGCATAGAAGTGAAGTTT+TGG - chr5_4:68481157-68481176 Msa0866660:intron 40.0%
!!! GTGAAGTTTTGGATCTCTCT+TGG - chr5_4:68481168-68481187 Msa0866660:intron 40.0%
GTGAAAACACTTCCAAGCAA+TGG + chr5_4:68481358-68481377 None:intergenic 40.0%
! TCCGATTTGTAGGCTTCTTT+AGG - chr5_4:68481412-68481431 Msa0866660:intron 40.0%
CAATCAACAACCTGAGAATC+GGG + chr5_4:68481590-68481609 None:intergenic 40.0%
CCAATCAACAACCTGAGAAT+CGG + chr5_4:68481591-68481610 None:intergenic 40.0%
GGGATTGTTGGATCTTTAGA+AGG - chr5_4:68481755-68481774 Msa0866660:intron 40.0%
AAAAAGAAACTTCCTGGCAG+AGG - chr5_4:68482141-68482160 Msa0866660:intron 40.0%
AAAAGAAACTTCCTGGCAGA+GGG - chr5_4:68482142-68482161 Msa0866660:intron 40.0%
TCACAAGTCAGAATCCTTGA+TGG - chr5_4:68482323-68482342 Msa0866660:CDS 40.0%
CACAAGTCAGAATCCTTGAT+GGG - chr5_4:68482324-68482343 Msa0866660:CDS 40.0%
GAGGTAAATGATGCACACAT+TGG + chr5_4:68482533-68482552 None:intergenic 40.0%
TGTGCATCATTTACCTCAGA+CGG - chr5_4:68482536-68482555 Msa0866660:CDS 40.0%
! AGAAAGTTAGGTCTTGTGAG+CGG - chr5_4:68482645-68482664 Msa0866660:CDS 40.0%
AACATCATTGCTGCGAAAGT+CGG - chr5_4:68482901-68482920 Msa0866660:CDS 40.0%
ACTTCATTTCAAACGGGTAC+AGG + chr5_4:68483043-68483062 None:intergenic 40.0%
TCCAATTCCAAATCAATCGC+AGG - chr5_4:68483204-68483223 Msa0866660:CDS 40.0%
!! TCCTGCGATTGATTTGGAAT+TGG + chr5_4:68483208-68483227 None:intergenic 40.0%
TCGAACGGTTCATATTGCAT+AGG + chr5_4:68483252-68483271 None:intergenic 40.0%
CCTGCACTTCAAATATCATG+CGG + chr5_4:68483302-68483321 None:intergenic 40.0%
! CGCATGATATTTGAAGTGCA+GGG - chr5_4:68483300-68483319 Msa0866660:CDS 40.0%
GAATCCTGGTCCAAAGTTTA+TGG - chr5_4:68483322-68483341 Msa0866660:CDS 40.0%
TCTCAAGCCTCCATAAACTT+TGG + chr5_4:68483335-68483354 None:intergenic 40.0%
GATCAAGACAAGCTAAAGCT+TGG + chr5_4:68483484-68483503 None:intergenic 40.0%
TTTGGTCCACAAGAATCTAC+TGG - chr5_4:68483522-68483541 Msa0866660:CDS 40.0%
TTTGATATGTTGTGGGACCA+TGG - chr5_4:68483608-68483627 Msa0866660:five_prime_UTR 40.0%
TTGATATGTTGTGGGACCAT+GGG - chr5_4:68483609-68483628 Msa0866660:five_prime_UTR 40.0%
AAGGTGGAGATTTCAAGAGT+TGG - chr5_4:68483664-68483683 Msa0866660:intron 40.0%
GATCACATGGATGGCAAAAT+TGG + chr5_4:68483745-68483764 None:intergenic 40.0%
CTTGTGGCCATTTGTACAAA+AGG - chr5_4:68483764-68483783 Msa0866660:intron 40.0%
GGGTTAAACTTGGAAATGTG+TGG - chr5_4:68483785-68483804 Msa0866660:intron 40.0%
!! GTTGTTGATGACGAAAGAGG+AGG + chr5_4:68479530-68479549 None:intergenic 45.0%
AACACGGAGATTGAAAACGG+TGG + chr5_4:68479704-68479723 None:intergenic 45.0%
TTCCTTGAAGGGGGATTTCA+TGG - chr5_4:68480060-68480079 Msa0866660:three_prime_UTR 45.0%
TCCTTGAAGGGGGATTTCAT+GGG - chr5_4:68480061-68480080 Msa0866660:three_prime_UTR 45.0%
GAGGAGGTTTATGAAGAGCA+TGG - chr5_4:68480278-68480297 Msa0866660:three_prime_UTR 45.0%
GTGAGTTCTTCGGAGGAATT+TGG - chr5_4:68480438-68480457 Msa0866660:three_prime_UTR 45.0%
GGTAGTTGCTAAGGAATCTG+AGG - chr5_4:68480554-68480573 Msa0866660:three_prime_UTR 45.0%
AGAGAGTTTGAGGATGCAGA+TGG - chr5_4:68480624-68480643 Msa0866660:CDS 45.0%
AACGGTAAATAGGGCGAGAA+GGG - chr5_4:68480662-68480681 Msa0866660:CDS 45.0%
!! ATTGAGATTGATGACGTGCG+TGG - chr5_4:68480698-68480717 Msa0866660:CDS 45.0%
CAAGATATCCAAGCGCATGA+AGG - chr5_4:68480834-68480853 Msa0866660:CDS 45.0%
AAATTGCACCTTCATGCGCT+TGG + chr5_4:68480845-68480864 None:intergenic 45.0%
ATGCTTGAGGGGTCAATTTC+AGG + chr5_4:68480978-68480997 None:intergenic 45.0%
! TTTTCCCGCCTAAGATCTTC+CGG - chr5_4:68481105-68481124 Msa0866660:CDS 45.0%
AACAACCGGAAGATCTTAGG+CGG + chr5_4:68481113-68481132 None:intergenic 45.0%
TCCAACAACCGGAAGATCTT+AGG + chr5_4:68481116-68481135 None:intergenic 45.0%
AAACCATTGCATGAGTTCCG+TGG - chr5_4:68481137-68481156 Msa0866660:intron 45.0%
AACCATTGCATGAGTTCCGT+GGG - chr5_4:68481138-68481157 Msa0866660:intron 45.0%
CTGACAAAACTGTCCGACTA+TGG - chr5_4:68481318-68481337 Msa0866660:CDS 45.0%
CACGATTCACTTGCCATAGT+CGG + chr5_4:68481334-68481353 None:intergenic 45.0%
AGTGAATCGTGACCATTGCT+TGG - chr5_4:68481343-68481362 Msa0866660:CDS 45.0%
! TAGTGGATCCATAGACGGAA+AGG - chr5_4:68481547-68481566 Msa0866660:intron 45.0%
! CCGATTCTCAGGTTGTTGAT+TGG - chr5_4:68481588-68481607 Msa0866660:intron 45.0%
GACTGCAGTATGTTATCGAC+CGG - chr5_4:68481631-68481650 Msa0866660:intron 45.0%
CAGTATGTTATCGACCGGAT+GGG - chr5_4:68481636-68481655 Msa0866660:intron 45.0%
GTATAACAGGGAGGGATTGT+TGG - chr5_4:68481743-68481762 Msa0866660:intron 45.0%
GAGCTTGGTCCTAACATTTC+TGG - chr5_4:68482054-68482073 Msa0866660:CDS 45.0%
ACCAGATAATCACTTGCAGC+TGG - chr5_4:68482095-68482114 Msa0866660:CDS 45.0%
TCCAGCTGCAAGTGATTATC+TGG + chr5_4:68482099-68482118 None:intergenic 45.0%
ACATTGGACTGCCTGTGTTA+AGG + chr5_4:68482517-68482536 None:intergenic 45.0%
GTGCATCATTTACCTCAGAC+GGG - chr5_4:68482537-68482556 Msa0866660:CDS 45.0%
TTCCTCAAACGCATCAGTTG+CGG - chr5_4:68482670-68482689 Msa0866660:CDS 45.0%
! TGTTCATTTTCGGTGACTGG+AGG + chr5_4:68482716-68482735 None:intergenic 45.0%
TCAGAGAGAAAGAAGCAGGT+GGG + chr5_4:68482793-68482812 None:intergenic 45.0%
TTCAGAGAGAAAGAAGCAGG+TGG + chr5_4:68482794-68482813 None:intergenic 45.0%
TGGTTCAGAGAGAAAGAAGC+AGG + chr5_4:68482797-68482816 None:intergenic 45.0%
TACCAACAATGCTCATGCGT+GGG - chr5_4:68482955-68482974 Msa0866660:CDS 45.0%
! GTACAGGTAGCCCGTAATTT+TGG + chr5_4:68483027-68483046 None:intergenic 45.0%
! CCGCATGATATTTGAAGTGC+AGG - chr5_4:68483299-68483318 Msa0866660:CDS 45.0%
! ATTTGAAGTGCAGGGAATCC+TGG - chr5_4:68483308-68483327 Msa0866660:CDS 45.0%
TCCTGGTCCAAAGTTTATGG+AGG - chr5_4:68483325-68483344 Msa0866660:CDS 45.0%
! AAGGGTTTTCAAAGGTCCCA+TGG + chr5_4:68483628-68483647 None:intergenic 45.0%
GTGGAGATTTCAAGAGTTGG+TGG - chr5_4:68483667-68483686 Msa0866660:intron 45.0%
TTGCCATCCATGTGATCTTG+TGG - chr5_4:68483748-68483767 Msa0866660:intron 45.0%
CAAATGGCCACAAGATCACA+TGG + chr5_4:68483758-68483777 None:intergenic 45.0%
!!! TGTGTGGCAGTTGTTTTTGC+TGG - chr5_4:68483801-68483820 Msa0866660:intron 45.0%
AGTGGCTCGAAGTCTTTGTT+TGG - chr5_4:68483895-68483914 Msa0866660:intron 45.0%
ACCCATGAAATCCCCCTTCA+AGG + chr5_4:68480065-68480084 None:intergenic 50.0%
CTACGCTCTCTCACACTCTT+TGG + chr5_4:68480258-68480277 None:intergenic 50.0%
! CAAAGAGTGTGAGAGAGCGT+AGG - chr5_4:68480256-68480275 Msa0866660:three_prime_UTR 50.0%
CTCTAGTGTGAGTTCTTCGG+AGG - chr5_4:68480431-68480450 Msa0866660:three_prime_UTR 50.0%
! TCTGGGGTGTCTCATTGTCA+AGG - chr5_4:68480591-68480610 Msa0866660:exon 50.0%
! TGAGGATGCAGATGGTGATG+TGG - chr5_4:68480632-68480651 Msa0866660:CDS 50.0%
GAACGGTAAATAGGGCGAGA+AGG - chr5_4:68480661-68480680 Msa0866660:CDS 50.0%
ACGGTAAATAGGGCGAGAAG+GGG - chr5_4:68480663-68480682 Msa0866660:CDS 50.0%
TAAATAGGGCGAGAAGGGGT+TGG - chr5_4:68480667-68480686 Msa0866660:CDS 50.0%
AAGGGAGCTATGCAGTCTCA+GGG - chr5_4:68480739-68480758 Msa0866660:CDS 50.0%
! TAGTCCTGATGGGCAGTATC+TGG - chr5_4:68480878-68480897 Msa0866660:CDS 50.0%
TGGCTACAGGTGGTGAAGAT+GGG - chr5_4:68480898-68480917 Msa0866660:CDS 50.0%
GTGGTGAAGATGGGGTTGTT+CGG - chr5_4:68480907-68480926 Msa0866660:CDS 50.0%
TGGTGAAGATGGGGTTGTTC+GGG - chr5_4:68480908-68480927 Msa0866660:CDS 50.0%
GCGGTCTTTCTCATGCTCTT+CGG + chr5_4:68481068-68481087 None:intergenic 50.0%
ACAACCGGAAGATCTTAGGC+GGG + chr5_4:68481112-68481131 None:intergenic 50.0%
GCCTAAGATCTTCCGGTTGT+TGG - chr5_4:68481112-68481131 Msa0866660:CDS 50.0%
GCAGTATGTTATCGACCGGA+TGG - chr5_4:68481635-68481654 Msa0866660:intron 50.0%
!! CAGAGGGATAACTGGCTTTC+AGG - chr5_4:68482158-68482177 Msa0866660:intron 50.0%
TACCGCAACTGATGCGTTTG+AGG + chr5_4:68482675-68482694 None:intergenic 50.0%
!! AGAAAGAAGCAGGTGGGTTG+GGG + chr5_4:68482787-68482806 None:intergenic 50.0%
! GAGAAAGAAGCAGGTGGGTT+GGG + chr5_4:68482788-68482807 None:intergenic 50.0%
AGAGAAAGAAGCAGGTGGGT+TGG + chr5_4:68482789-68482808 None:intergenic 50.0%
TTCCAAAGGGATCTGCAACC+TGG - chr5_4:68482837-68482856 Msa0866660:CDS 50.0%
GAAACAGGAAGCTTCTCCTC+GGG + chr5_4:68482863-68482882 None:intergenic 50.0%
CGAAACAGGAAGCTTCTCCT+CGG + chr5_4:68482864-68482883 None:intergenic 50.0%
CGAGGAGAAGCTTCCTGTTT+CGG - chr5_4:68482862-68482881 Msa0866660:CDS 50.0%
GAGGAGAAGCTTCCTGTTTC+GGG - chr5_4:68482863-68482882 Msa0866660:CDS 50.0%
GTACCAACAATGCTCATGCG+TGG - chr5_4:68482954-68482973 Msa0866660:CDS 50.0%
ACCAACAATGCTCATGCGTG+GGG - chr5_4:68482956-68482975 Msa0866660:CDS 50.0%
GGTATGGTCATTGTGACTGC+AGG - chr5_4:68482977-68482996 Msa0866660:CDS 50.0%
GCCTCCATAAACTTTGGACC+AGG + chr5_4:68483329-68483348 None:intergenic 50.0%
TAGGGGCCAGTAGATTCTTG+TGG + chr5_4:68483531-68483550 None:intergenic 50.0%
TGGCCACAAGATCACATGGA+TGG + chr5_4:68483754-68483773 None:intergenic 50.0%
! AGAGTGTGAGAGAGCGTAGG+AGG - chr5_4:68480259-68480278 Msa0866660:three_prime_UTR 55.0%
GAAGGGAGCTATGCAGTCTC+AGG - chr5_4:68480738-68480757 Msa0866660:CDS 55.0%
GCTATGCAGTCTCAGGGTGT+AGG - chr5_4:68480745-68480764 Msa0866660:CDS 55.0%
GTAGCCAGATACTGCCCATC+AGG + chr5_4:68480885-68480904 None:intergenic 55.0%
GATGGGCAGTATCTGGCTAC+AGG - chr5_4:68480885-68480904 Msa0866660:CDS 55.0%
CTGGCTACAGGTGGTGAAGA+TGG - chr5_4:68480897-68480916 Msa0866660:CDS 55.0%
GGCTACAGGTGGTGAAGATG+GGG - chr5_4:68480899-68480918 Msa0866660:CDS 55.0%
AAGATGGGGTTGTTCGGGTG+TGG - chr5_4:68480913-68480932 Msa0866660:CDS 55.0%
TGCCCACGGAACTCATGCAA+TGG + chr5_4:68481143-68481162 None:intergenic 55.0%
GATGCGCACCTTTCCGTCTA+TGG + chr5_4:68481558-68481577 None:intergenic 55.0%
! TAGACGGAAAGGTGCGCATC+TGG - chr5_4:68481558-68481577 Msa0866660:intron 55.0%
CTGGACGATACCCGATTCTC+AGG - chr5_4:68481577-68481596 Msa0866660:intron 55.0%
ATGTTATCGACCGGATGGGC+AGG - chr5_4:68481640-68481659 Msa0866660:intron 55.0%
CTTCCTGGCAGAGGGATAAC+TGG - chr5_4:68482150-68482169 Msa0866660:intron 55.0%
AAGCCAGTTATCCCTCTGCC+AGG + chr5_4:68482156-68482175 None:intergenic 55.0%
ACGCATCAGTTGCGGTACCT+TGG - chr5_4:68482678-68482697 Msa0866660:CDS 55.0%
TCAGTTGCGGTACCTTGGCA+CGG - chr5_4:68482683-68482702 Msa0866660:CDS 55.0%
GGAGGTTTCAAACCGTGCCA+AGG + chr5_4:68482698-68482717 None:intergenic 55.0%
!! TTGGTCTTGGAGCCCGAAAC+AGG + chr5_4:68482878-68482897 None:intergenic 55.0%
! ACCCCACGCATGAGCATTGT+TGG + chr5_4:68482960-68482979 None:intergenic 55.0%
CAATGCTCATGCGTGGGGTA+TGG - chr5_4:68482961-68482980 Msa0866660:CDS 55.0%
TGGTCATTGTGACTGCAGGC+TGG - chr5_4:68482981-68483000 Msa0866660:CDS 55.0%
GGTCATTGTGACTGCAGGCT+GGG - chr5_4:68482982-68483001 Msa0866660:CDS 55.0%
ATTGTGACTGCAGGCTGGGA+CGG - chr5_4:68482986-68483005 Msa0866660:CDS 55.0%
! GTGTGAGAGAGCGTAGGAGG+AGG - chr5_4:68480262-68480281 Msa0866660:three_prime_UTR 60.0%
GGGCAGTATCTGGCTACAGG+TGG - chr5_4:68480888-68480907 Msa0866660:CDS 60.0%
GGTTGTTCGGGTGTGGCAAG+TGG - chr5_4:68480920-68480939 Msa0866660:CDS 60.0%
TCGGGTGTGGCAAGTGGTTG+AGG - chr5_4:68480926-68480945 Msa0866660:CDS 60.0%
GGTGTGGCAAGTGGTTGAGG+AGG - chr5_4:68480929-68480948 Msa0866660:CDS 60.0%
GGCCAGGTTGCAGATCCCTT+TGG + chr5_4:68482842-68482861 None:intergenic 60.0%
TTGTGACTGCAGGCTGGGAC+GGG - chr5_4:68482987-68483006 Msa0866660:CDS 60.0%
AGGAAGCTTCTCCTCGGGCC+AGG + chr5_4:68482858-68482877 None:intergenic 65.0%
GGGATCTGCAACCTGGCCCG+AGG - chr5_4:68482844-68482863 Msa0866660:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 68479434 68484212 68479434 ID=Msa0866660;Name=Msa0866660
chr5_4 mRNA 68479434 68484212 68479434 ID=Msa0866660-mRNA-1;Parent=Msa0866660;Name=Msa0866660-mRNA-1;_AED=0.06;_eAED=0.06;_QI=288|1|1|1|0.85|0.75|8|1158|705
chr5_4 exon 68479434 68481133 68479434 ID=Msa0866660-mRNA-1:exon:21669;Parent=Msa0866660-mRNA-1
chr5_4 exon 68481275 68481368 68481275 ID=Msa0866660-mRNA-1:exon:21668;Parent=Msa0866660-mRNA-1
chr5_4 exon 68481467 68481546 68481467 ID=Msa0866660-mRNA-1:exon:21667;Parent=Msa0866660-mRNA-1
chr5_4 exon 68481843 68481894 68481843 ID=Msa0866660-mRNA-1:exon:21666;Parent=Msa0866660-mRNA-1
chr5_4 exon 68481985 68482142 68481985 ID=Msa0866660-mRNA-1:exon:21665;Parent=Msa0866660-mRNA-1
chr5_4 exon 68482257 68482347 68482257 ID=Msa0866660-mRNA-1:exon:21664;Parent=Msa0866660-mRNA-1
chr5_4 exon 68482444 68483663 68482444 ID=Msa0866660-mRNA-1:exon:21663;Parent=Msa0866660-mRNA-1
chr5_4 exon 68484044 68484212 68484044 ID=Msa0866660-mRNA-1:exon:21662;Parent=Msa0866660-mRNA-1
chr5_4 five_prime_UTR 68484044 68484212 68484044 ID=Msa0866660-mRNA-1:five_prime_utr;Parent=Msa0866660-mRNA-1
chr5_4 five_prime_UTR 68483545 68483663 68483545 ID=Msa0866660-mRNA-1:five_prime_utr;Parent=Msa0866660-mRNA-1
chr5_4 CDS 68482444 68483544 68482444 ID=Msa0866660-mRNA-1:cds;Parent=Msa0866660-mRNA-1
chr5_4 CDS 68482257 68482347 68482257 ID=Msa0866660-mRNA-1:cds;Parent=Msa0866660-mRNA-1
chr5_4 CDS 68481985 68482142 68481985 ID=Msa0866660-mRNA-1:cds;Parent=Msa0866660-mRNA-1
chr5_4 CDS 68481843 68481894 68481843 ID=Msa0866660-mRNA-1:cds;Parent=Msa0866660-mRNA-1
chr5_4 CDS 68481467 68481546 68481467 ID=Msa0866660-mRNA-1:cds;Parent=Msa0866660-mRNA-1
chr5_4 CDS 68481275 68481368 68481275 ID=Msa0866660-mRNA-1:cds;Parent=Msa0866660-mRNA-1
chr5_4 CDS 68480592 68481133 68480592 ID=Msa0866660-mRNA-1:cds;Parent=Msa0866660-mRNA-1
chr5_4 three_prime_UTR 68479434 68480591 68479434 ID=Msa0866660-mRNA-1:three_prime_utr;Parent=Msa0866660-mRNA-1
Gene Sequence

>Msa0866660

ATGGGTAGTTTCAGTGGAGAAGAAGATTGTCGGTTTTTTGATGCTGAAGAGGATGTTGTGTCTATTAGGGATGTAAATTCCGATGATGATGATGATGATGATAAAGGGGTGTCTGTGTCTGTTGATTTTGATTATGAAGTGTGGATTCGGAGTCCAAAGAGTGTGAGAGAGCGTAGGAGGAGGTTTATGAAGAGCATGGGAATGAGTGTAGATGAAATTGTAGTTGAAAATTCATTGTATTTTGAGAAGGAAGAGATTATGGAAAGAAGAAGAGATAGTAGTGGTTCTGAAGAGGAATTTAGTTCATGTCGGCTGTCAATGTCTTGTTGCTCTAGTGTGAGTTCTTCGGAGGAATTTGGTTTAGTGGATATTAATAACTTGCCATCTCAAGATGGAAATTTGGAGAAAAGAATGAGGGATAATGAGAAGATGAGTGATTGTTCAAATCAGTTGGTAGTTGCTAAGGAATCTGAGGATTGTGTAAATGTCTCTGGGGTGTCTCATTGTCAAGGATTGATAGATAGAGAGTTTGAGGATGCAGATGGTGATGTGGTTACTAGAACGGTAAATAGGGCGAGAAGGGGTTGGTTGAGAAGATTGAGATTGATGACGTGCGTGGTTGATAATGATAGAGAAGAAGGGAGCTATGCAGTCTCAGGGTGTAGGCTTCAGAAAGTAAAGGTCCGTCAATGTAGGAAGAAAATGAAGGAACTTTCATCGCTTTACTTGAGGCAAGATATCCAAGCGCATGAAGGTGCAATTTTGACCATGAAATTTAGTCCTGATGGGCAGTATCTGGCTACAGGTGGTGAAGATGGGGTTGTTCGGGTGTGGCAAGTGGTTGAGGAGGATAGATGTAATGAAATTCACATTCCTGAAATTGACCCCTCAAGCATTTACTTTACAGTGAATAATCTCTCTCAATTGACACCATTGTTTATGGATAAGGAAAAACTTGGTCAACCGAAGAGCATGAGAAAGACCGCAGATTCAGCTTGTGTTGTTTTCCCGCCTAAGATCTTCCGGTTGTTGGAAAAACCATTGCATGAGTTCCGTGGGCATAGAAGTGAAGTTTTGGATCTCTCTTGGTCAAAGAAGAATTATCTTCTTTCATCATCAGCTGACAAAACTGTCCGACTATGGCAAGTGAATCGTGACCATTGCTTGGAAGTGTTTTCACACAGTAATTATGTGACATGCATACAATTCAATCCTGTTGATGAAGATTATTTCATTAGTGGATCCATAGACGGAAAGGTGCGCATCTGGACGATACCCGATTCTCAGGTTGTTGATTGGACTGATGTCAGAGACATAGTGACTGCAGTATGTTATCGACCGGATGGGCAGGGAGGGATTGTTGGATCTTTAGAAGGAAATTGTTGGTTTTATAAAATATCAGATAATCACTTGCAGCTGGATTCCCAACTATGCTTAATTGGTAAAAAGAAACTTCCTGGCAGAGGGATAACTGGCTTTCAGTTTCTTCCTCAAGATTCCAAGAAAGTTATGGTTACATGTGCTGATTCACAAGTCAGAATCCTTGATGGGCTTAATGTGATTTGTAAATACAAAAGCCTTAACACAGGCAGTCCAATGTGTGCATCATTTACCTCAGACGGGAAACATATTTTATCAGCATGCGAGGACTCTAATGTATATCTATGGAACGTTAATCAGGAAGAGTCTAATAACCCCATGAAATCTAAGAAAGTTAGGTCTTGTGAGCGGTTTTCCTCAAACGCATCAGTTGCGGTACCTTGGCACGGTTTGAAACCTCCAGTCACCGAAAATGAACAATTGAATGTCTTGAATAAAAAGTCACCACAAGTTGTTATGCAATTACACCCCAACCCACCTGCTTCTTTCTCTCTGAACCAAGATTTTTTCTTGGAGTCTTTTCCAAAGGGATCTGCAACCTGGCCCGAGGAGAAGCTTCCTGTTTCGGGCTCCAAGACCAAAAAAACATCATTGCTGCGAAAGTCGGAATACAAATTCTTGAAATCTTCATGTAAGAGTACCAACAATGCTCATGCGTGGGGTATGGTCATTGTGACTGCAGGCTGGGACGGGAAGATAAAAACATTCCAAAATTACGGGCTACCTGTACCCGTTTGA
Protein sequence

>Msa0866660

MGSFSGEEDCRFFDAEEDVVSIRDVNSDDDDDDDKGVSVSVDFDYEVWIRSPKSVRERRRRFMKSMGMSVDEIVVENSLYFEKEEIMERRRDSSGSEEEFSSCRLSMSCCSSVSSSEEFGLVDINNLPSQDGNLEKRMRDNEKMSDCSNQLVVAKESEDCVNVSGVSHCQGLIDREFEDADGDVVTRTVNRARRGWLRRLRLMTCVVDNDREEGSYAVSGCRLQKVKVRQCRKKMKELSSLYLRQDIQAHEGAILTMKFSPDGQYLATGGEDGVVRVWQVVEEDRCNEIHIPEIDPSSIYFTVNNLSQLTPLFMDKEKLGQPKSMRKTADSACVVFPPKIFRLLEKPLHEFRGHRSEVLDLSWSKKNYLLSSSADKTVRLWQVNRDHCLEVFSHSNYVTCIQFNPVDEDYFISGSIDGKVRIWTIPDSQVVDWTDVRDIVTAVCYRPDGQGGIVGSLEGNCWFYKISDNHLQLDSQLCLIGKKKLPGRGITGFQFLPQDSKKVMVTCADSQVRILDGLNVICKYKSLNTGSPMCASFTSDGKHILSACEDSNVYLWNVNQEESNNPMKSKKVRSCERFSSNASVAVPWHGLKPPVTENEQLNVLNKKSPQVVMQLHPNPPASFSLNQDFFLESFPKGSATWPEEKLPVSGSKTKKTSLLRKSEYKFLKSSCKSTNNAHAWGMVIVTAGWDGKIKTFQNYGLPVPV*