Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428320 | XP_013461654.1 | 96.264 | 910 | 24 | 2 | 1 | 910 | 1 | 900 | 0.0 | 1793 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428320 | sp|Q75QN6|DPHS1_ARATH | 60.405 | 889 | 322 | 10 | 33 | 895 | 30 | 914 | 0.0 | 1009 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428320 | A0A072V0Z0 | 96.264 | 910 | 24 | 2 | 1 | 910 | 1 | 900 | 0.0 | 1793 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0428320 | Msa0536410 | 0.825488 | 4.560452e-54 | -8.615850e-47 |
| Msa0428320 | Msa1454410 | 0.815054 | 1.125298e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428320 | MtrunA17_Chr3g0131721 | 96.264 | 910 | 24 | 2 | 1 | 910 | 1 | 900 | 0.0 | 1793 |
| Msa0428320 | MtrunA17_Chr8g0385841 | 70.778 | 900 | 243 | 8 | 29 | 910 | 59 | 956 | 0.0 | 1246 |
| Msa0428320 | MtrunA17_Chr4g0065631 | 31.737 | 167 | 110 | 1 | 662 | 828 | 15 | 177 | 7.83e-23 | 96.7 |
| Msa0428320 | MtrunA17_Chr7g0222731 | 31.724 | 145 | 94 | 2 | 686 | 829 | 175 | 315 | 8.77e-17 | 85.5 |
| Msa0428320 | MtrunA17_Chr3g0123501 | 31.973 | 147 | 91 | 3 | 686 | 829 | 105 | 245 | 2.73e-16 | 83.6 |
| Msa0428320 | MtrunA17_Chr8g0381371 | 30.986 | 142 | 93 | 2 | 686 | 826 | 109 | 246 | 5.57e-15 | 79.3 |
| Msa0428320 | MtrunA17_Chr5g0438601 | 31.034 | 145 | 90 | 2 | 692 | 836 | 55 | 189 | 4.29e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0428320 | AT5G23720.3 | 60.630 | 889 | 320 | 11 | 33 | 895 | 21 | 905 | 0.0 | 1009 |
| Msa0428320 | AT5G23720.1 | 60.405 | 889 | 322 | 10 | 33 | 895 | 30 | 914 | 0.0 | 1009 |
| Msa0428320 | AT5G23720.2 | 60.817 | 832 | 299 | 9 | 87 | 895 | 3 | 830 | 0.0 | 951 |
| Msa0428320 | AT3G23610.2 | 33.523 | 176 | 111 | 2 | 657 | 830 | 21 | 192 | 2.20e-27 | 110 |
| Msa0428320 | AT3G23610.4 | 33.143 | 175 | 111 | 2 | 657 | 829 | 21 | 191 | 4.53e-27 | 110 |
| Msa0428320 | AT3G23610.5 | 32.759 | 174 | 111 | 2 | 657 | 828 | 21 | 190 | 5.71e-26 | 106 |
| Msa0428320 | AT3G23610.1 | 32.759 | 174 | 111 | 2 | 657 | 828 | 21 | 190 | 6.81e-26 | 106 |
| Msa0428320 | AT3G23610.3 | 32.759 | 174 | 111 | 2 | 657 | 828 | 21 | 190 | 2.18e-25 | 105 |
| Msa0428320 | AT3G06110.2 | 36.111 | 144 | 88 | 1 | 686 | 829 | 26 | 165 | 7.32e-22 | 94.0 |
| Msa0428320 | AT3G06110.3 | 36.111 | 144 | 88 | 1 | 686 | 829 | 26 | 165 | 7.32e-22 | 94.0 |
| Msa0428320 | AT3G06110.1 | 34.722 | 144 | 80 | 2 | 686 | 829 | 26 | 155 | 1.74e-17 | 80.9 |
| Msa0428320 | AT3G23610.6 | 30.303 | 132 | 85 | 3 | 657 | 786 | 21 | 147 | 6.58e-14 | 70.5 |
Find 197 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTGCAGCTTTCTTTATT+TGG | 0.126300 | 3_2:-79159692 | None:intergenic |
| ATGACAGCTGCTGCTTCTTT+TGG | 0.208037 | 3_2:-79159458 | None:intergenic |
| CAGGAGAACAATTTCAATTC+AGG | 0.209338 | 3_2:+79161828 | Msa0428320:CDS |
| AAAGTAAACTAGTCAAATTT+TGG | 0.247843 | 3_2:+79158029 | Msa0428320:five_prime_UTR |
| TCAAATTGGTTAATGCCTTT+TGG | 0.248576 | 3_2:-79163396 | None:intergenic |
| CTTCTTCCACTCTCCCCTTT+TGG | 0.249867 | 3_2:+79158437 | Msa0428320:CDS |
| GAACCCTGCAAATTTGTTAT+TGG | 0.270073 | 3_2:+79160477 | Msa0428320:CDS |
| AGGCTCCACACTTCCTTTAG+AGG | 0.286291 | 3_2:-79161283 | None:intergenic |
| ACCACGGCTAATATTCAAAT+TGG | 0.289992 | 3_2:-79163410 | None:intergenic |
| TGTTTGTGTGCTAACGAAAT+TGG | 0.290419 | 3_2:+79162157 | Msa0428320:CDS |
| AACGACATGTTCCGAACTTT+TGG | 0.292257 | 3_2:+79159758 | Msa0428320:CDS |
| CTCCAGTTATATCATGTAAC+AGG | 0.324022 | 3_2:-79160870 | None:intergenic |
| ACTGCGGAACTCACGAACTA+TGG | 0.324918 | 3_2:-79160935 | None:intergenic |
| TCAGGAGATTCAAAGTTTAC+TGG | 0.334007 | 3_2:+79160721 | Msa0428320:CDS |
| TGCAGAATCTTATAAAGAAT+TGG | 0.334628 | 3_2:+79161761 | Msa0428320:CDS |
| AATCACAAGCTTCATCAAAT+AGG | 0.335591 | 3_2:-79162684 | None:intergenic |
| ACTTCCCTGAACATTGAAAA+TGG | 0.340311 | 3_2:-79159423 | None:intergenic |
| GTTACAAATAATTTGTTCAT+TGG | 0.346512 | 3_2:+79162073 | Msa0428320:CDS |
| ATCTTCAGAAGTCACATAAA+AGG | 0.347309 | 3_2:+79163332 | Msa0428320:CDS |
| GAAAACTTCTCCTTACTTGT+TGG | 0.348206 | 3_2:-79161129 | None:intergenic |
| CGATATGGGTCCGGGGTGAT+TGG | 0.352196 | 3_2:+79160562 | Msa0428320:CDS |
| TCGGCCAATAACAAATTTGC+AGG | 0.354067 | 3_2:-79160481 | None:intergenic |
| CACCTCTCACCGTTACTTCT+CGG | 0.360699 | 3_2:+79158196 | Msa0428320:CDS |
| GATATAACTGGAGGGAAGTT+AGG | 0.364218 | 3_2:+79160880 | Msa0428320:CDS |
| AGGGAACAACCTGTGGAGTT+TGG | 0.372948 | 3_2:-79159553 | None:intergenic |
| AATAAAATATAAAGAGTGTT+AGG | 0.375524 | 3_2:-79157960 | None:intergenic |
| CTGAAATTAGTTTGTGGGAT+AGG | 0.382401 | 3_2:+79158932 | Msa0428320:CDS |
| GGAGGGAGGAGCCGGAGAAA+GGG | 0.387911 | 3_2:-79157991 | None:intergenic |
| TATGAATTCGCGAAGCGGTT+GGG | 0.409973 | 3_2:+79159527 | Msa0428320:CDS |
| ACCTCTCACCGTTACTTCTC+GGG | 0.411321 | 3_2:+79158197 | Msa0428320:CDS |
| GAGGGAGGAGCCGGAGAAAG+GGG | 0.415931 | 3_2:-79157990 | None:intergenic |
| CCAAGGGCATCACCATCTTC+AGG | 0.416633 | 3_2:+79161201 | Msa0428320:CDS |
| TATATTTCTCTTGCAACAAA+AGG | 0.417880 | 3_2:+79163481 | Msa0428320:three_prime_UTR |
| GAATATCAGCAGCCCTTGGC+AGG | 0.417993 | 3_2:+79160386 | Msa0428320:CDS |
| CTGAATTGAAATTGTTCTCC+TGG | 0.419634 | 3_2:-79161827 | None:intergenic |
| GATATGGGTCCGGGGTGATT+GGG | 0.424335 | 3_2:+79160563 | Msa0428320:CDS |
| AGTCATTCACAATACCAGTT+TGG | 0.426382 | 3_2:+79159662 | Msa0428320:CDS |
| AGTACTAACTCAACCAACTT+AGG | 0.428542 | 3_2:-79160823 | None:intergenic |
| TGACAACCTTCTCTTGATAT+AGG | 0.429168 | 3_2:-79161252 | None:intergenic |
| TCTTCAAATTTAGATACAAT+AGG | 0.429201 | 3_2:+79160514 | Msa0428320:CDS |
| GCAATGAACCGATATGGGTC+CGG | 0.432407 | 3_2:+79160553 | Msa0428320:CDS |
| TATATCATGTAACAGGTTAG+AGG | 0.432779 | 3_2:-79160863 | None:intergenic |
| CAATGAACCGATATGGGTCC+GGG | 0.434401 | 3_2:+79160554 | Msa0428320:CDS |
| TGGAAAACGTGCAGATGATC+AGG | 0.435360 | 3_2:+79160792 | Msa0428320:CDS |
| CTCAATGGCTTCAATCAGTT+CGG | 0.440116 | 3_2:+79158374 | Msa0428320:CDS |
| TGGAGGGAGGAGCCGGAGAA+AGG | 0.440504 | 3_2:-79157992 | None:intergenic |
| CTCAAGTGCTTCCAAAAGTT+CGG | 0.440539 | 3_2:-79159769 | None:intergenic |
| ACAAATAATTTGTTCATTGG+TGG | 0.443611 | 3_2:+79162076 | Msa0428320:CDS |
| ACTTCAAATCATCGTTCCTC+TGG | 0.444625 | 3_2:+79158403 | Msa0428320:CDS |
| ACTATAAGCAAAATATCATC+GGG | 0.449489 | 3_2:+79161054 | Msa0428320:CDS |
| CTCTAGCGCATTTGAATCAC+AGG | 0.451527 | 3_2:+79160351 | Msa0428320:CDS |
| TCACATAAAAGGCTATCATC+AGG | 0.453983 | 3_2:+79163343 | Msa0428320:CDS |
| CATATGGCATTAAGTTTCAA+AGG | 0.454516 | 3_2:-79163723 | None:intergenic |
| TATTTGGAGCCATTCCAAAC+TGG | 0.456362 | 3_2:-79159676 | None:intergenic |
| AACCTGTTACATGATATAAC+TGG | 0.457931 | 3_2:+79160868 | Msa0428320:CDS |
| GCAAACTGAAATTAGTTTGT+GGG | 0.460021 | 3_2:+79158927 | Msa0428320:CDS |
| CCCTGCAGGCAATCCTTGTC+CGG | 0.464792 | 3_2:+79163694 | Msa0428320:three_prime_UTR |
| AGGGAGGAGCCGGAGAAAGG+GGG | 0.473091 | 3_2:-79157989 | None:intergenic |
| GGGAGGAGCCGGAGAAAGGG+GGG | 0.475261 | 3_2:-79157988 | None:intergenic |
| ACCGGACAAGGATTGCCTGC+AGG | 0.476547 | 3_2:-79163695 | None:intergenic |
| TAGTAAGAAACAAACCAAAA+GGG | 0.477577 | 3_2:-79158451 | None:intergenic |
| CGGCTATTATGTTCACTCAA+TGG | 0.478120 | 3_2:+79158359 | Msa0428320:CDS |
| AAAGATATCGTCGTCAAGAA+TGG | 0.479198 | 3_2:+79159481 | Msa0428320:CDS |
| TGCCTTAAAAGTCAAACATC+AGG | 0.481112 | 3_2:+79160703 | Msa0428320:CDS |
| CAATCACCCCGGACCCATAT+CGG | 0.482574 | 3_2:-79160561 | None:intergenic |
| ATATCAATGCAATCCTTTCA+AGG | 0.482789 | 3_2:-79162018 | None:intergenic |
| GCAATGATGGAGGGAGGAGC+CGG | 0.487159 | 3_2:-79157999 | None:intergenic |
| CCTATATGTGGTAAGAATGC+TGG | 0.487282 | 3_2:+79163283 | Msa0428320:CDS |
| TTGTCACTCTCCAACAAGTA+AGG | 0.490726 | 3_2:+79161119 | Msa0428320:CDS |
| AACATTGTGGCTATTGACTC+TGG | 0.496613 | 3_2:+79160748 | Msa0428320:CDS |
| TACTATAAGCAAAATATCAT+CGG | 0.502871 | 3_2:+79161053 | Msa0428320:CDS |
| CCTGAAGATGGTGATGCCCT+TGG | 0.503983 | 3_2:-79161201 | None:intergenic |
| TGCCGTCAACTTAGGTGGCG+TGG | 0.505312 | 3_2:+79160454 | Msa0428320:CDS |
| ATTAGTTTGTGGGATAGGCT+TGG | 0.505360 | 3_2:+79158937 | Msa0428320:CDS |
| CTTATAAAGAATTGGAACAT+TGG | 0.505976 | 3_2:+79161769 | Msa0428320:CDS |
| TGTTGATGCATATGAATTGA+AGG | 0.506136 | 3_2:+79161881 | Msa0428320:CDS |
| AGCAAACTGAAATTAGTTTG+TGG | 0.506852 | 3_2:+79158926 | Msa0428320:CDS |
| TGTACACACAATGCAACACT+TGG | 0.507479 | 3_2:+79162117 | Msa0428320:CDS |
| TCAGGTCAATTATCCTAAGT+TGG | 0.507668 | 3_2:+79160810 | Msa0428320:CDS |
| AAATCTCTATTGCCTGAAGA+TGG | 0.511439 | 3_2:-79161213 | None:intergenic |
| GGAAGTGTGGAGCCTTTGCT+TGG | 0.513540 | 3_2:+79161291 | Msa0428320:CDS |
| GGCTTCCATGCCGTCAACTT+AGG | 0.513844 | 3_2:+79160446 | Msa0428320:CDS |
| TGGAAGCACTTGAGCTTAGT+CGG | 0.514875 | 3_2:+79159778 | Msa0428320:CDS |
| GGAGAGTGGAAGAAGAGCGA+GGG | 0.516253 | 3_2:-79158429 | None:intergenic |
| ATATGAATTCGCGAAGCGGT+TGG | 0.516782 | 3_2:+79159526 | Msa0428320:CDS |
| ACTGCATGGGAAGGTTTCAA+TGG | 0.517527 | 3_2:+79163225 | Msa0428320:CDS |
| GATTCACCTTCACCTGCTAC+TGG | 0.518527 | 3_2:+79161093 | Msa0428320:CDS |
| ATCTTTGCAAAACCATCATT+AGG | 0.519158 | 3_2:-79163181 | None:intergenic |
| CCAGCATTCTTACCACATAT+AGG | 0.522428 | 3_2:-79163283 | None:intergenic |
| AGGTTTCAATGGAGTGGCAG+CGG | 0.522644 | 3_2:+79163236 | Msa0428320:CDS |
| ACATAGGTAACTGTAAATTC+TGG | 0.523580 | 3_2:+79159383 | Msa0428320:intron |
| GGGAGAGTGGAAGAAGAGCG+AGG | 0.525028 | 3_2:-79158430 | None:intergenic |
| CCGGACAAGGATTGCCTGCA+GGG | 0.530000 | 3_2:-79163694 | None:intergenic |
| TGTCATGGAAAATCCTCTAA+AGG | 0.531259 | 3_2:+79161270 | Msa0428320:CDS |
| GCTTGGTAAAGCTGAAATGT+TGG | 0.533081 | 3_2:+79158954 | Msa0428320:CDS |
| TCCCACGCCACCTAAGTTGA+CGG | 0.533309 | 3_2:-79160456 | None:intergenic |
| AAATTATTTGTAACAGCGGA+TGG | 0.533522 | 3_2:-79162064 | None:intergenic |
| GCGTAAATGATGGACCCTGC+AGG | 0.534643 | 3_2:+79163680 | Msa0428320:three_prime_UTR |
| CTCAGAATGTTCATTGCTGA+TGG | 0.534804 | 3_2:-79159037 | None:intergenic |
| AGATCAAGTTCTCATAATCA+TGG | 0.537522 | 3_2:+79160625 | Msa0428320:CDS |
| TGAAATGAATAGAGCTCTTG+AGG | 0.538221 | 3_2:+79159062 | Msa0428320:CDS |
| TAAAGATCAATCTGATTCTG+AGG | 0.540942 | 3_2:+79158167 | Msa0428320:CDS |
| ATCTTTAGCCTGCAATGAGA+GGG | 0.541066 | 3_2:-79158151 | None:intergenic |
| CGACTTTCATAAATTTGCCA+AGG | 0.546175 | 3_2:+79161338 | Msa0428320:CDS |
| AGTTCTGAGAGTGATCTAAT+CGG | 0.546642 | 3_2:+79159732 | Msa0428320:CDS |
| AGCCGAGCGCAGCCTAATGA+TGG | 0.548726 | 3_2:+79163169 | Msa0428320:CDS |
| TTGTTATCAGAAATGAAGAC+AGG | 0.548999 | 3_2:+79160425 | Msa0428320:CDS |
| GAATGAGATTGCCTTTGAGT+GGG | 0.549472 | 3_2:-79163445 | None:intergenic |
| ATTTCACATTATCAGTAGCA+TGG | 0.549918 | 3_2:+79163125 | Msa0428320:CDS |
| CATGACAATGGAAATCCAAA+AGG | 0.549970 | 3_2:+79163381 | Msa0428320:CDS |
| ATGAAAACTTGTCCTATATG+TGG | 0.552309 | 3_2:+79163271 | Msa0428320:CDS |
| TGATGCTATCAAGTTATGCC+AGG | 0.554038 | 3_2:+79161809 | Msa0428320:CDS |
| ATATGGCATTAAGTTTCAAA+GGG | 0.555326 | 3_2:-79163722 | None:intergenic |
| AACAAACCAAAAGGGGAGAG+TGG | 0.557956 | 3_2:-79158443 | None:intergenic |
| ATGTTGGGAGATATCACTAC+TGG | 0.560602 | 3_2:+79158334 | Msa0428320:CDS |
| AAACTAATTTCAGTTTGCTC+CGG | 0.564623 | 3_2:-79158922 | None:intergenic |
| GACTTGAGCATATCCTTGAA+AGG | 0.565301 | 3_2:+79162005 | Msa0428320:CDS |
| TTGGGACGCTTCAGAAAGAA+AGG | 0.565363 | 3_2:+79160581 | Msa0428320:CDS |
| GCCGTCAACTTAGGTGGCGT+GGG | 0.565719 | 3_2:+79160455 | Msa0428320:CDS |
| GCAACACAGTCTGAACGCCT+TGG | 0.567334 | 3_2:+79159503 | Msa0428320:CDS |
| GAAAGAATATCAGCAGCCCT+TGG | 0.569082 | 3_2:+79160382 | Msa0428320:CDS |
| GCGGAGCTTAGCTGTAAAGC+GGG | 0.571470 | 3_2:-79161316 | None:intergenic |
| ATATCAAGAGAAGGTTGTCA+TGG | 0.573239 | 3_2:+79161255 | Msa0428320:CDS |
| GCGCTAGAGCTTTCAAGCAA+AGG | 0.574262 | 3_2:-79160337 | None:intergenic |
| CTAACATCATTACCCTGCCA+AGG | 0.574342 | 3_2:-79160399 | None:intergenic |
| TCGGTTCATTGCAAAATCAA+AGG | 0.575290 | 3_2:-79160542 | None:intergenic |
| GGGAGATATCACTACTGGAC+CGG | 0.575849 | 3_2:+79158339 | Msa0428320:CDS |
| CTGCGGTTGAGTTTAACTGC+AGG | 0.576398 | 3_2:-79163612 | None:intergenic |
| AACCATCATTAGGCTGCGCT+CGG | 0.579168 | 3_2:-79163171 | None:intergenic |
| TGAATGAGATTGCCTTTGAG+TGG | 0.579954 | 3_2:-79163446 | None:intergenic |
| GAGTGACAACTACCAGTAGC+AGG | 0.583417 | 3_2:-79161105 | None:intergenic |
| GATCTTTAGCCTGCAATGAG+AGG | 0.583444 | 3_2:-79158152 | None:intergenic |
| GGAGAGTCAGCCCCACTCAA+AGG | 0.583703 | 3_2:+79163434 | Msa0428320:CDS |
| CGGCCAATAACAAATTTGCA+GGG | 0.584615 | 3_2:-79160480 | None:intergenic |
| AGAGTCAATAGCCACAATGT+TGG | 0.585395 | 3_2:-79160746 | None:intergenic |
| TTCCATGCCGTCAACTTAGG+TGG | 0.586366 | 3_2:+79160449 | Msa0428320:CDS |
| ATTCACAGAGATCTGTTCCA+AGG | 0.586803 | 3_2:+79161184 | Msa0428320:CDS |
| CTGCAGTTAAACTCAACCGC+AGG | 0.586823 | 3_2:+79163613 | Msa0428320:three_prime_UTR |
| TTCACAGAGATCTGTTCCAA+GGG | 0.587046 | 3_2:+79161185 | Msa0428320:CDS |
| CACATAAAAGGCTATCATCA+GGG | 0.588271 | 3_2:+79163344 | Msa0428320:CDS |
| TTCACAATACCAGTTTGGAA+TGG | 0.589365 | 3_2:+79159667 | Msa0428320:CDS |
| TTAGGAAGTGCTGATGTACA+AGG | 0.593116 | 3_2:+79160898 | Msa0428320:CDS |
| GTTGGGAGTCCAAACTCCAC+AGG | 0.595194 | 3_2:+79159544 | Msa0428320:CDS |
| CATCAGCAATGAACATTCTG+AGG | 0.595490 | 3_2:+79159038 | Msa0428320:CDS |
| ACCAATTTGAATATTAGCCG+TGG | 0.596949 | 3_2:+79163409 | Msa0428320:CDS |
| AGGTAACTGTAAATTCTGGA+GGG | 0.604939 | 3_2:+79159387 | Msa0428320:intron |
| ATTTGAATATTAGCCGTGGT+GGG | 0.606199 | 3_2:+79163413 | Msa0428320:CDS |
| TGAACGGCAATGATGGAGGG+AGG | 0.606896 | 3_2:-79158005 | None:intergenic |
| TAATCTTGTAGTTATGTACA+CGG | 0.608070 | 3_2:+79160310 | Msa0428320:intron |
| AATTTGAATATTAGCCGTGG+TGG | 0.608220 | 3_2:+79163412 | Msa0428320:CDS |
| CGCGGAGCTTAGCTGTAAAG+CGG | 0.609114 | 3_2:-79161317 | None:intergenic |
| TAGGTAACTGTAAATTCTGG+AGG | 0.610696 | 3_2:+79159386 | Msa0428320:intron |
| CTGAATCACAAGAATCTCGA+TGG | 0.610796 | 3_2:-79161161 | None:intergenic |
| ACCCGAGAAGTAACGGTGAG+AGG | 0.611381 | 3_2:-79158198 | None:intergenic |
| AGTAAGAAACAAACCAAAAG+GGG | 0.612858 | 3_2:-79158450 | None:intergenic |
| GCTTCGCGAATTCATATCCA+AGG | 0.614314 | 3_2:-79159520 | None:intergenic |
| TGAACATACCCGAGAAGTAA+CGG | 0.614982 | 3_2:-79158205 | None:intergenic |
| CATTGAGTGAACATAATAGC+CGG | 0.616439 | 3_2:-79158358 | None:intergenic |
| AAAATCCTCTAAAGGAAGTG+TGG | 0.620301 | 3_2:+79161278 | Msa0428320:CDS |
| CTGTTACATGATATAACTGG+AGG | 0.621049 | 3_2:+79160871 | Msa0428320:CDS |
| GTTTACTGGCTCCAACATTG+TGG | 0.622408 | 3_2:+79160735 | Msa0428320:CDS |
| TGCTGATGGCGTGCTCTGTG+TGG | 0.623709 | 3_2:-79159023 | None:intergenic |
| ATGGGAAGGTTTCAATGGAG+TGG | 0.625504 | 3_2:+79163230 | Msa0428320:CDS |
| TTTCAATGGAGTGGCAGCGG+CGG | 0.626210 | 3_2:+79163239 | Msa0428320:CDS |
| GGTAACTGTAAATTCTGGAG+GGG | 0.626416 | 3_2:+79159388 | Msa0428320:intron |
| AAAGATCAATCTGATTCTGA+GGG | 0.630492 | 3_2:+79158168 | Msa0428320:CDS |
| TGTTGATAGTGCCATGACAA+TGG | 0.631412 | 3_2:+79163369 | Msa0428320:CDS |
| CGCCACCTAAGTTGACGGCA+TGG | 0.632240 | 3_2:-79160451 | None:intergenic |
| TTGGATATGAATTCGCGAAG+CGG | 0.634174 | 3_2:+79159522 | Msa0428320:CDS |
| GTAAAGCGGGAACCAAGCAA+AGG | 0.635518 | 3_2:-79161303 | None:intergenic |
| GAACAAATTATTTGTAACAG+CGG | 0.636032 | 3_2:-79162068 | None:intergenic |
| TGGCAAATTTATGAAAGTCG+CGG | 0.637341 | 3_2:-79161335 | None:intergenic |
| GCTTCTCCTATATCAAGAGA+AGG | 0.637759 | 3_2:+79161246 | Msa0428320:CDS |
| GCTGCTCTCATGGATCTGCA+AGG | 0.638432 | 3_2:+79160967 | Msa0428320:CDS |
| AATGAGATTGCCTTTGAGTG+GGG | 0.639146 | 3_2:-79163444 | None:intergenic |
| ATAGTTCGTGAGTTCCGCAG+TGG | 0.645681 | 3_2:+79160937 | Msa0428320:CDS |
| TAACATCATTACCCTGCCAA+GGG | 0.646659 | 3_2:-79160398 | None:intergenic |
| AATATCAGCAGCCCTTGGCA+GGG | 0.653845 | 3_2:+79160387 | Msa0428320:CDS |
| AAGGATTGCATTGATATCTG+AGG | 0.657679 | 3_2:+79162024 | Msa0428320:CDS |
| AAGAATGCTGGACTGAGCAG+CGG | 0.661928 | 3_2:+79163295 | Msa0428320:CDS |
| GTACACACAATGCAACACTT+GGG | 0.662799 | 3_2:+79162118 | Msa0428320:CDS |
| CAACTACCAGTAGCAGGTGA+AGG | 0.664431 | 3_2:-79161099 | None:intergenic |
| AGAGGGAAAAGAGACCTACC+TGG | 0.667299 | 3_2:-79158134 | None:intergenic |
| TATAAGCAAAATATCATCGG+GGG | 0.671441 | 3_2:+79161056 | Msa0428320:CDS |
| AATGAACCGATATGGGTCCG+GGG | 0.678192 | 3_2:+79160555 | Msa0428320:CDS |
| CTGAAGCGTCCCAATCACCC+CGG | 0.678744 | 3_2:-79160572 | None:intergenic |
| ATCACTAATCAAAACCAGGT+AGG | 0.679366 | 3_2:+79158120 | Msa0428320:CDS |
| TGTTACATGATATAACTGGA+GGG | 0.685354 | 3_2:+79160872 | Msa0428320:CDS |
| AGAAGAGCGAGGGAATCCAG+AGG | 0.692742 | 3_2:-79158419 | None:intergenic |
| TAGTCTTAGAGAATCTGCAG+AGG | 0.696322 | 3_2:+79158879 | Msa0428320:intron |
| AATAATCACTAATCAAAACC+AGG | 0.697945 | 3_2:+79158116 | Msa0428320:CDS |
| CAATTCATATGCATCAACAA+CGG | 0.707979 | 3_2:-79161877 | None:intergenic |
| GGACGCTTCAGAAAGAAAGG+TGG | 0.711953 | 3_2:+79160584 | Msa0428320:CDS |
| TGGGGCTGACTCTCCCACCA+CGG | 0.716501 | 3_2:-79163426 | None:intergenic |
| CATATGCATCAACAACGGTG+TGG | 0.721373 | 3_2:-79161872 | None:intergenic |
| CTATAAGCAAAATATCATCG+GGG | 0.745750 | 3_2:+79161055 | Msa0428320:CDS |
| GAGCAGCACGAAAACCACTG+CGG | 0.811902 | 3_2:-79160951 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAAATTATTTATTTTT+TGG | - | chr3_2:79160078-79160097 | None:intergenic | 0.0% |
| !!! | AATTATTTATTTTTTGGTTA+TGG | - | chr3_2:79160072-79160091 | None:intergenic | 10.0% |
| !!! | AATAAAATATAAAGAGTGTT+AGG | - | chr3_2:79157963-79157982 | None:intergenic | 15.0% |
| !!! | ACTTTCTATTTATTTTCAAT+CGG | + | chr3_2:79158238-79158257 | Msa0428320:intron | 15.0% |
| !!! | TTTTTTATTTTGATGATTTC+AGG | + | chr3_2:79158303-79158322 | Msa0428320:intron | 15.0% |
| !! | AAAAAATATCATCCTATATT+TGG | + | chr3_2:79159991-79160010 | Msa0428320:intron | 15.0% |
| !! | AAAAATATCATCCTATATTT+GGG | + | chr3_2:79159992-79160011 | Msa0428320:intron | 15.0% |
| !!! | TTGTTACTGATTTTTTATTT+TGG | + | chr3_2:79161597-79161616 | Msa0428320:intron | 15.0% |
| !! | CTCTTATTATTTAATTGATT+TGG | + | chr3_2:79161655-79161674 | Msa0428320:intron | 15.0% |
| !! | ATAAATTAGTAGAATAATCA+GGG | - | chr3_2:79162248-79162267 | None:intergenic | 15.0% |
| !! | AATAAATTAGTAGAATAATC+AGG | - | chr3_2:79162249-79162268 | None:intergenic | 15.0% |
| !!! | TATATTTATGCATTTTCATA+TGG | + | chr3_2:79162485-79162504 | Msa0428320:intron | 15.0% |
| !!! | ATATTTATGCATTTTCATAT+GGG | + | chr3_2:79162486-79162505 | Msa0428320:intron | 15.0% |
| !! | AAATATTAAGATTTATTCCT+TGG | - | chr3_2:79162608-79162627 | None:intergenic | 15.0% |
| !!! | TTCAAACTTTTTATAACTTT+TGG | + | chr3_2:79163648-79163667 | Msa0428320:three_prime_UTR | 15.0% |
| !!! | TCAAACTTTTTATAACTTTT+GGG | + | chr3_2:79163649-79163668 | Msa0428320:three_prime_UTR | 15.0% |
| !!! | AAAGTAAACTAGTCAAATTT+TGG | + | chr3_2:79158029-79158048 | Msa0428320:five_prime_UTR | 20.0% |
| !!! | CTTTCTATTTATTTTCAATC+GGG | + | chr3_2:79158239-79158258 | Msa0428320:intron | 20.0% |
| !!! | TTCTAATTTGAACTAGTTTT+TGG | + | chr3_2:79158718-79158737 | Msa0428320:intron | 20.0% |
| !! | ATTAAAAGAAAATTCTCAAG+AGG | - | chr3_2:79159915-79159934 | None:intergenic | 20.0% |
| !! | TCTTCAAATTTAGATACAAT+AGG | + | chr3_2:79160514-79160533 | Msa0428320:CDS | 20.0% |
| !! | TACTATAAGCAAAATATCAT+CGG | + | chr3_2:79161053-79161072 | Msa0428320:CDS | 20.0% |
| !! | GTGCAAAATAAAATGATTTA+TGG | + | chr3_2:79161476-79161495 | Msa0428320:intron | 20.0% |
| !! | TGAGTAACAGTATAAATTAT+GGG | + | chr3_2:79161570-79161589 | Msa0428320:intron | 20.0% |
| !! | AAATAATAAGAGAAAACAAG+AGG | - | chr3_2:79161647-79161666 | None:intergenic | 20.0% |
| !!! | GTTACAAATAATTTGTTCAT+TGG | + | chr3_2:79162073-79162092 | Msa0428320:CDS | 20.0% |
| !!! | TTTTTGTAAGTAAATAGATC+AGG | - | chr3_2:79162202-79162221 | None:intergenic | 20.0% |
| !! | TAAATTAGTAGAATAATCAG+GGG | - | chr3_2:79162247-79162266 | None:intergenic | 20.0% |
| !! | TTCTACTAATTTATTTGCAA+AGG | + | chr3_2:79162254-79162273 | Msa0428320:intron | 20.0% |
| !! | CAAAAAAAAAAAAGACAAGA+AGG | - | chr3_2:79162305-79162324 | None:intergenic | 20.0% |
| !!! | CTTCTTGTCTTTTTTTTTTT+TGG | + | chr3_2:79162303-79162322 | Msa0428320:intron | 20.0% |
| !!! | TAGTTTTTTTTCTTGCATTA+TGG | + | chr3_2:79163582-79163601 | Msa0428320:three_prime_UTR | 20.0% |
| ! | TATTGTTATCTATCTAGTTG+TGG | + | chr3_2:79157919-79157938 | Msa0428320:intron | 25.0% |
| !!! | TGACTAGTTTACTTTTTGAA+CGG | - | chr3_2:79158024-79158043 | None:intergenic | 25.0% |
| !!! | TAGTCAAATTTTGGAGTTAA+CGG | + | chr3_2:79158038-79158057 | Msa0428320:five_prime_UTR | 25.0% |
| !!! | TGGTTTTGATTAGTGATTAT+TGG | - | chr3_2:79158117-79158136 | None:intergenic | 25.0% |
| ! | AATAATCACTAATCAAAACC+AGG | + | chr3_2:79158116-79158135 | Msa0428320:CDS | 25.0% |
| ! | TAGTAAGAAACAAACCAAAA+GGG | - | chr3_2:79158454-79158473 | None:intergenic | 25.0% |
| ! | ATAGTAAGAAACAAACCAAA+AGG | - | chr3_2:79158455-79158474 | None:intergenic | 25.0% |
| !!! | TTTTAAAAAGAAAGCAGAAG+TGG | + | chr3_2:79158623-79158642 | Msa0428320:intron | 25.0% |
| ! | AAAAAAGAAGCTGTAACAAA+AGG | + | chr3_2:79158788-79158807 | Msa0428320:intron | 25.0% |
| !!! | AATATGCTTTCTAAAGTTGT+TGG | + | chr3_2:79158836-79158855 | Msa0428320:intron | 25.0% |
| !! | TTGAATCAAGTTCATTTTCT+TGG | + | chr3_2:79158980-79158999 | Msa0428320:CDS | 25.0% |
| !! | TGAATCAAGTTCATTTTCTT+GGG | + | chr3_2:79158981-79159000 | Msa0428320:CDS | 25.0% |
| ! | TATGTTAATTCATTCTTTCG+AGG | + | chr3_2:79159209-79159228 | Msa0428320:intron | 25.0% |
| !!! | TATTTCTAGAATACTAGTGT+AGG | + | chr3_2:79159241-79159260 | Msa0428320:intron | 25.0% |
| ! | ATAGTTGAGTTAAGTAAGAA+GGG | - | chr3_2:79159575-79159594 | None:intergenic | 25.0% |
| ! | GATTACTACAAATTACATTG+CGG | - | chr3_2:79159603-79159622 | None:intergenic | 25.0% |
| ! | AATTATACCTCAAAAACAAG+AGG | - | chr3_2:79159806-79159825 | None:intergenic | 25.0% |
| ! | TAATCTTGTAGTTATGTACA+CGG | + | chr3_2:79160310-79160329 | Msa0428320:intron | 25.0% |
| !! | ATTTGAAGAGATTGTCTTTT+CGG | - | chr3_2:79160503-79160522 | None:intergenic | 25.0% |
| ! | ACTATAAGCAAAATATCATC+GGG | + | chr3_2:79161054-79161073 | Msa0428320:CDS | 25.0% |
| !! | TTTTATCCAGGTTATTGTTT+TGG | + | chr3_2:79161418-79161437 | Msa0428320:intron | 25.0% |
| ! | CTGAGTAACAGTATAAATTA+TGG | + | chr3_2:79161569-79161588 | Msa0428320:intron | 25.0% |
| ! | TGATAAAGAATAAGTCAAGA+GGG | - | chr3_2:79161726-79161745 | None:intergenic | 25.0% |
| ! | ATGATAAAGAATAAGTCAAG+AGG | - | chr3_2:79161727-79161746 | None:intergenic | 25.0% |
| ! | TGCAGAATCTTATAAAGAAT+TGG | + | chr3_2:79161761-79161780 | Msa0428320:CDS | 25.0% |
| ! | CTTATAAAGAATTGGAACAT+TGG | + | chr3_2:79161769-79161788 | Msa0428320:CDS | 25.0% |
| !!! | TTTCAATTCAGGATTTTTTG+AGG | + | chr3_2:79161839-79161858 | Msa0428320:CDS | 25.0% |
| !!! | TTCAATTCAGGATTTTTTGA+GGG | + | chr3_2:79161840-79161859 | Msa0428320:CDS | 25.0% |
| ! | ATTCATAACCATTAACTTTC+AGG | + | chr3_2:79161979-79161998 | Msa0428320:intron | 25.0% |
| ! | GAACAAATTATTTGTAACAG+CGG | - | chr3_2:79162071-79162090 | None:intergenic | 25.0% |
| !!! | ACAAATAATTTGTTCATTGG+TGG | + | chr3_2:79162076-79162095 | Msa0428320:CDS | 25.0% |
| ! | TAAACAAGACTTAGACAAAA+AGG | - | chr3_2:79162456-79162475 | None:intergenic | 25.0% |
| !!! | GGATTAATCTTGTTTTCTAT+TGG | + | chr3_2:79162507-79162526 | Msa0428320:intron | 25.0% |
| !!! | GTTTTGAGTGACTATTTTAA+AGG | + | chr3_2:79162546-79162565 | Msa0428320:intron | 25.0% |
| !!! | TTTTAGTTCATTGCTTTGAA+GGG | + | chr3_2:79162740-79162759 | Msa0428320:CDS | 25.0% |
| ! | TTAGACAACATTGTGTTTAT+AGG | - | chr3_2:79162822-79162841 | None:intergenic | 25.0% |
| !! | AAGTTGAAACTTATGTTTTC+TGG | + | chr3_2:79162841-79162860 | Msa0428320:intron | 25.0% |
| ! | CACAAATTATTTCATCAGAT+AGG | + | chr3_2:79162926-79162945 | Msa0428320:intron | 25.0% |
| ! | AACTTGATAAAAAACTGCAT+GGG | + | chr3_2:79163212-79163231 | Msa0428320:CDS | 25.0% |
| ! | TATATTTCTCTTGCAACAAA+AGG | + | chr3_2:79163481-79163500 | Msa0428320:three_prime_UTR | 25.0% |
| TAAAGATCAATCTGATTCTG+AGG | + | chr3_2:79158167-79158186 | Msa0428320:CDS | 30.0% | |
| AAAGATCAATCTGATTCTGA+GGG | + | chr3_2:79158168-79158187 | Msa0428320:CDS | 30.0% | |
| !!! | ATTTCAGGTTTTGTGTATGT+TGG | + | chr3_2:79158318-79158337 | Msa0428320:intron | 30.0% |
| !!! | TTTCAGGTTTTGTGTATGTT+GGG | + | chr3_2:79158319-79158338 | Msa0428320:intron | 30.0% |
| AGTAAGAAACAAACCAAAAG+GGG | - | chr3_2:79158453-79158472 | None:intergenic | 30.0% | |
| !!! | CACATTTTTTACACTCCTTA+AGG | - | chr3_2:79158571-79158590 | None:intergenic | 30.0% |
| ! | AGAAAATCATTTTCAGCAAG+TGG | - | chr3_2:79158677-79158696 | None:intergenic | 30.0% |
| !! | ACTTGCTGAAAATGATTTTC+TGG | + | chr3_2:79158676-79158695 | Msa0428320:intron | 30.0% |
| !!! | GGTGTCATAATTTTTTGTCA+TGG | + | chr3_2:79158809-79158828 | Msa0428320:intron | 30.0% |
| ! | AAACTAATTTCAGTTTGCTC+CGG | - | chr3_2:79158925-79158944 | None:intergenic | 30.0% |
| ! | AGCAAACTGAAATTAGTTTG+TGG | + | chr3_2:79158926-79158945 | Msa0428320:CDS | 30.0% |
| !! | GCAAACTGAAATTAGTTTGT+GGG | + | chr3_2:79158927-79158946 | Msa0428320:CDS | 30.0% |
| !! | GTGCATACTGTTTATTTTCA+TGG | + | chr3_2:79159330-79159349 | Msa0428320:intron | 30.0% |
| AGAATTTACAGTTACCTATG+TGG | - | chr3_2:79159384-79159403 | None:intergenic | 30.0% | |
| ACATAGGTAACTGTAAATTC+TGG | + | chr3_2:79159383-79159402 | Msa0428320:intron | 30.0% | |
| !!! | TTTGCCATTTTCAATGTTCA+GGG | + | chr3_2:79159419-79159438 | Msa0428320:CDS | 30.0% |
| CATAGTTGAGTTAAGTAAGA+AGG | - | chr3_2:79159576-79159595 | None:intergenic | 30.0% | |
| CACTTCTATTTGTAAGAAAC+AGG | + | chr3_2:79159635-79159654 | Msa0428320:intron | 30.0% | |
| TTTCTGCAGCTTTCTTTATT+TGG | - | chr3_2:79159695-79159714 | None:intergenic | 30.0% | |
| ! | TATGATAAAAGTTTTCAGCG+TGG | + | chr3_2:79159841-79159860 | Msa0428320:intron | 30.0% |
| TGACCTGAAAATTTCAAATG+CGG | + | chr3_2:79159964-79159983 | Msa0428320:intron | 30.0% | |
| AACTTCCAATATATCACACA+TGG | - | chr3_2:79160110-79160129 | None:intergenic | 30.0% | |
| ATGTGTGATATATTGGAAGT+TGG | + | chr3_2:79160109-79160128 | Msa0428320:intron | 30.0% | |
| TGTGTGATATATTGGAAGTT+GGG | + | chr3_2:79160110-79160129 | Msa0428320:intron | 30.0% | |
| TTGGGGTAGTTTGAAAATTA+TGG | + | chr3_2:79160128-79160147 | Msa0428320:intron | 30.0% | |
| TGGGGTAGTTTGAAAATTAT+GGG | + | chr3_2:79160129-79160148 | Msa0428320:intron | 30.0% | |
| TTGTTATCAGAAATGAAGAC+AGG | + | chr3_2:79160425-79160444 | Msa0428320:CDS | 30.0% | |
| ! | ATTTTGCAATGAACCGATAT+GGG | + | chr3_2:79160548-79160567 | Msa0428320:CDS | 30.0% |
| AGATCAAGTTCTCATAATCA+TGG | + | chr3_2:79160625-79160644 | Msa0428320:CDS | 30.0% | |
| TATATCATGTAACAGGTTAG+AGG | - | chr3_2:79160866-79160885 | None:intergenic | 30.0% | |
| AACCTGTTACATGATATAAC+TGG | + | chr3_2:79160868-79160887 | Msa0428320:CDS | 30.0% | |
| TGTTACATGATATAACTGGA+GGG | + | chr3_2:79160872-79160891 | Msa0428320:CDS | 30.0% | |
| !!! | GTTTTTTGTGCAATGAATGT+AGG | - | chr3_2:79161005-79161024 | None:intergenic | 30.0% |
| CTATAAGCAAAATATCATCG+GGG | + | chr3_2:79161055-79161074 | Msa0428320:CDS | 30.0% | |
| TATAAGCAAAATATCATCGG+GGG | + | chr3_2:79161056-79161075 | Msa0428320:CDS | 30.0% | |
| TAAAAACATTCGTAGAAGCA+AGG | - | chr3_2:79161403-79161422 | None:intergenic | 30.0% | |
| !! | TTCTACGAATGTTTTTATCC+AGG | + | chr3_2:79161406-79161425 | Msa0428320:intron | 30.0% |
| ATGTTAACTATTGTGGACAA+TGG | + | chr3_2:79161515-79161534 | Msa0428320:intron | 30.0% | |
| TAAGAGAAAACAAGAGGAAA+AGG | - | chr3_2:79161641-79161660 | None:intergenic | 30.0% | |
| TATTCTTTATCATGCTTTCC+AGG | + | chr3_2:79161734-79161753 | Msa0428320:intron | 30.0% | |
| CAATTCATATGCATCAACAA+CGG | - | chr3_2:79161880-79161899 | None:intergenic | 30.0% | |
| TGTTGATGCATATGAATTGA+AGG | + | chr3_2:79161881-79161900 | Msa0428320:CDS | 30.0% | |
| TAAAGTCAAACCATTCATAG+AGG | + | chr3_2:79161950-79161969 | Msa0428320:intron | 30.0% | |
| GAATATGTATCCTCTATGAA+TGG | - | chr3_2:79161963-79161982 | None:intergenic | 30.0% | |
| ATATCAATGCAATCCTTTCA+AGG | - | chr3_2:79162021-79162040 | None:intergenic | 30.0% | |
| AAATTATTTGTAACAGCGGA+TGG | - | chr3_2:79162067-79162086 | None:intergenic | 30.0% | |
| ACATTGCATTATATATGCAG+GGG | - | chr3_2:79162401-79162420 | None:intergenic | 30.0% | |
| GACATTGCATTATATATGCA+GGG | - | chr3_2:79162402-79162421 | None:intergenic | 30.0% | |
| !!! | AATCTTGTTTTCTATTGGAG+TGG | + | chr3_2:79162512-79162531 | Msa0428320:intron | 30.0% |
| !!! | ATCTTGTTTTCTATTGGAGT+GGG | + | chr3_2:79162513-79162532 | Msa0428320:intron | 30.0% |
| TTAAAGGACGAATCATCAAA+AGG | + | chr3_2:79162562-79162581 | Msa0428320:intron | 30.0% | |
| AATCACAAGCTTCATCAAAT+AGG | - | chr3_2:79162687-79162706 | None:intergenic | 30.0% | |
| !!! | GTTTTAGTTCATTGCTTTGA+AGG | + | chr3_2:79162739-79162758 | Msa0428320:CDS | 30.0% |
| CATTGATACTCTTAACATCA+AGG | - | chr3_2:79163049-79163068 | None:intergenic | 30.0% | |
| ATTTCACATTATCAGTAGCA+TGG | + | chr3_2:79163125-79163144 | Msa0428320:CDS | 30.0% | |
| ATCTTTGCAAAACCATCATT+AGG | - | chr3_2:79163184-79163203 | None:intergenic | 30.0% | |
| GAACTTGATAAAAAACTGCA+TGG | + | chr3_2:79163211-79163230 | Msa0428320:CDS | 30.0% | |
| ! | ATAGGACAAGTTTTCATTGT+TGG | - | chr3_2:79163268-79163287 | None:intergenic | 30.0% |
| ATGAAAACTTGTCCTATATG+TGG | + | chr3_2:79163271-79163290 | Msa0428320:CDS | 30.0% | |
| !! | TTTTATGTGACTTCTGAAGA+TGG | - | chr3_2:79163333-79163352 | None:intergenic | 30.0% |
| ATCTTCAGAAGTCACATAAA+AGG | + | chr3_2:79163332-79163351 | Msa0428320:CDS | 30.0% | |
| ! | TCAAATTGGTTAATGCCTTT+TGG | - | chr3_2:79163399-79163418 | None:intergenic | 30.0% |
| !! | AGATTTACTTTTCAGTCTCT+TGG | + | chr3_2:79163511-79163530 | Msa0428320:three_prime_UTR | 30.0% |
| ! | GTCTCTTGGAATTTTTATTG+TGG | + | chr3_2:79163525-79163544 | Msa0428320:three_prime_UTR | 30.0% |
| TGAACAAAGAAAAAAACCTG+CGG | - | chr3_2:79163632-79163651 | None:intergenic | 30.0% | |
| ! | GGTAAATTTTGCGTAAATGA+TGG | + | chr3_2:79163670-79163689 | Msa0428320:three_prime_UTR | 30.0% |
| !! | TACTTTTTGAACGGCAATGA+TGG | - | chr3_2:79158015-79158034 | None:intergenic | 35.0% |
| ATCACTAATCAAAACCAGGT+AGG | + | chr3_2:79158120-79158139 | Msa0428320:CDS | 35.0% | |
| CATTGAGTGAACATAATAGC+CGG | - | chr3_2:79158361-79158380 | None:intergenic | 35.0% | |
| GCTAACATTCTACTTGCAAA+GGG | - | chr3_2:79158549-79158568 | None:intergenic | 35.0% | |
| !! | CAAGTAGAATGTTAGCCTTA+AGG | + | chr3_2:79158553-79158572 | Msa0428320:intron | 35.0% |
| !! | CAGCAAGTGGATTTTCTTTT+CGG | - | chr3_2:79158664-79158683 | None:intergenic | 35.0% |
| ! | TGCTGAAAATGATTTTCTGG+AGG | + | chr3_2:79158679-79158698 | Msa0428320:intron | 35.0% |
| TGCAAAAATTGATCAGCTTC+CGG | + | chr3_2:79158903-79158922 | Msa0428320:CDS | 35.0% | |
| !! | CTGAAATTAGTTTGTGGGAT+AGG | + | chr3_2:79158932-79158951 | Msa0428320:CDS | 35.0% |
| TGAAATGAATAGAGCTCTTG+AGG | + | chr3_2:79159062-79159081 | Msa0428320:CDS | 35.0% | |
| CTATGCAGATGAAGAATATG+TGG | + | chr3_2:79159130-79159149 | Msa0428320:intron | 35.0% | |
| !! | TAATAAGTGCTGATACAGCA+TGG | - | chr3_2:79159191-79159210 | None:intergenic | 35.0% |
| TAGGTAACTGTAAATTCTGG+AGG | + | chr3_2:79159386-79159405 | Msa0428320:intron | 35.0% | |
| AGGTAACTGTAAATTCTGGA+GGG | + | chr3_2:79159387-79159406 | Msa0428320:intron | 35.0% | |
| !!! | CTTTGCCATTTTCAATGTTC+AGG | + | chr3_2:79159418-79159437 | Msa0428320:CDS | 35.0% |
| ACTTCCCTGAACATTGAAAA+TGG | - | chr3_2:79159426-79159445 | None:intergenic | 35.0% | |
| AAAGATATCGTCGTCAAGAA+TGG | + | chr3_2:79159481-79159500 | Msa0428320:CDS | 35.0% | |
| AGTCATTCACAATACCAGTT+TGG | + | chr3_2:79159662-79159681 | Msa0428320:CDS | 35.0% | |
| TTCACAATACCAGTTTGGAA+TGG | + | chr3_2:79159667-79159686 | Msa0428320:CDS | 35.0% | |
| !! | AGTTCTGAGAGTGATCTAAT+CGG | + | chr3_2:79159732-79159751 | Msa0428320:CDS | 35.0% |
| ! | ATATGACAGTCACACAGTTT+TGG | + | chr3_2:79160046-79160065 | Msa0428320:intron | 35.0% |
| CCAATATATCACACATGGAA+AGG | - | chr3_2:79160105-79160124 | None:intergenic | 35.0% | |
| CCTTTCCATGTGTGATATAT+TGG | + | chr3_2:79160102-79160121 | Msa0428320:intron | 35.0% | |
| GTGTGATATATTGGAAGTTG+GGG | + | chr3_2:79160111-79160130 | Msa0428320:intron | 35.0% | |
| !! | GAACCCTGCAAATTTGTTAT+TGG | + | chr3_2:79160477-79160496 | Msa0428320:CDS | 35.0% |
| TCGGTTCATTGCAAAATCAA+AGG | - | chr3_2:79160545-79160564 | None:intergenic | 35.0% | |
| ! | GATTTTGCAATGAACCGATA+TGG | + | chr3_2:79160547-79160566 | Msa0428320:CDS | 35.0% |
| TGCCTTAAAAGTCAAACATC+AGG | + | chr3_2:79160703-79160722 | Msa0428320:CDS | 35.0% | |
| !! | CTCCTGATGTTTGACTTTTA+AGG | - | chr3_2:79160708-79160727 | None:intergenic | 35.0% |
| TCAGGAGATTCAAAGTTTAC+TGG | + | chr3_2:79160721-79160740 | Msa0428320:CDS | 35.0% | |
| TCAGGTCAATTATCCTAAGT+TGG | + | chr3_2:79160810-79160829 | Msa0428320:CDS | 35.0% | |
| AGTACTAACTCAACCAACTT+AGG | - | chr3_2:79160826-79160845 | None:intergenic | 35.0% | |
| CTCCAGTTATATCATGTAAC+AGG | - | chr3_2:79160873-79160892 | None:intergenic | 35.0% | |
| CTGTTACATGATATAACTGG+AGG | + | chr3_2:79160871-79160890 | Msa0428320:CDS | 35.0% | |
| GAAAACTTCTCCTTACTTGT+TGG | - | chr3_2:79161132-79161151 | None:intergenic | 35.0% | |
| AAATCTCTATTGCCTGAAGA+TGG | - | chr3_2:79161216-79161235 | None:intergenic | 35.0% | |
| TGACAACCTTCTCTTGATAT+AGG | - | chr3_2:79161255-79161274 | None:intergenic | 35.0% | |
| ATATCAAGAGAAGGTTGTCA+TGG | + | chr3_2:79161255-79161274 | Msa0428320:CDS | 35.0% | |
| TGTCATGGAAAATCCTCTAA+AGG | + | chr3_2:79161270-79161289 | Msa0428320:CDS | 35.0% | |
| ! | AAAATCCTCTAAAGGAAGTG+TGG | + | chr3_2:79161278-79161297 | Msa0428320:CDS | 35.0% |
| TGGCAAATTTATGAAAGTCG+CGG | - | chr3_2:79161338-79161357 | None:intergenic | 35.0% | |
| CGACTTTCATAAATTTGCCA+AGG | + | chr3_2:79161338-79161357 | Msa0428320:CDS | 35.0% | |
| GTCAACGATGTTAACTATTG+TGG | + | chr3_2:79161508-79161527 | Msa0428320:intron | 35.0% | |
| TCAAGAGGGAAAAAAATGCA+CGG | - | chr3_2:79161712-79161731 | None:intergenic | 35.0% | |
| TATAAGATTCTGCATCAACC+TGG | - | chr3_2:79161755-79161774 | None:intergenic | 35.0% | |
| CTGAATTGAAATTGTTCTCC+TGG | - | chr3_2:79161830-79161849 | None:intergenic | 35.0% | |
| CAGGAGAACAATTTCAATTC+AGG | + | chr3_2:79161828-79161847 | Msa0428320:CDS | 35.0% | |
| AAGTCTGACCTGAAAGTTAA+TGG | - | chr3_2:79161990-79162009 | None:intergenic | 35.0% | |
| ! | AAGGATTGCATTGATATCTG+AGG | + | chr3_2:79162024-79162043 | Msa0428320:CDS | 35.0% |
| TGTTTGTGTGCTAACGAAAT+TGG | + | chr3_2:79162157-79162176 | Msa0428320:CDS | 35.0% | |
| ACCTCTTAAGGTGAATAAGT+GGG | + | chr3_2:79162352-79162371 | Msa0428320:intron | 35.0% | |
| GGACATTGCATTATATATGC+AGG | - | chr3_2:79162403-79162422 | None:intergenic | 35.0% | |
| !!! | TCTTGTTTTCTATTGGAGTG+GGG | + | chr3_2:79162514-79162533 | Msa0428320:intron | 35.0% |
| ATTCCTTGGCAGAATTTAAG+AGG | - | chr3_2:79162594-79162613 | None:intergenic | 35.0% | |
| ! | TTTTGAGCATCAAGTAAGCA+AGG | - | chr3_2:79162789-79162808 | None:intergenic | 35.0% |
| TCGTTCAGTATGTGTGATAT+TGG | + | chr3_2:79163005-79163024 | Msa0428320:intron | 35.0% | |
| TATCAATGCAAGTGACATCT+GGG | + | chr3_2:79163061-79163080 | Msa0428320:intron | 35.0% | |
| TGATAAAAAACTGCATGGGA+AGG | + | chr3_2:79163216-79163235 | Msa0428320:CDS | 35.0% | |
| TCACATAAAAGGCTATCATC+AGG | + | chr3_2:79163343-79163362 | Msa0428320:CDS | 35.0% | |
| CACATAAAAGGCTATCATCA+GGG | + | chr3_2:79163344-79163363 | Msa0428320:CDS | 35.0% | |
| ! | CTTTTGGATTTCCATTGTCA+TGG | - | chr3_2:79163383-79163402 | None:intergenic | 35.0% |
| CATGACAATGGAAATCCAAA+AGG | + | chr3_2:79163381-79163400 | Msa0428320:CDS | 35.0% | |
| ACCAATTTGAATATTAGCCG+TGG | + | chr3_2:79163409-79163428 | Msa0428320:CDS | 35.0% | |
| ACCACGGCTAATATTCAAAT+TGG | - | chr3_2:79163413-79163432 | None:intergenic | 35.0% | |
| AATTTGAATATTAGCCGTGG+TGG | + | chr3_2:79163412-79163431 | Msa0428320:CDS | 35.0% | |
| ATTTGAATATTAGCCGTGGT+GGG | + | chr3_2:79163413-79163432 | Msa0428320:CDS | 35.0% | |
| ! | ATTTTATACCCCCCTTTCTC+CGG | + | chr3_2:79157980-79157999 | Msa0428320:five_prime_UTR | 40.0% |
| !! | TTTTGAACGGCAATGATGGA+GGG | - | chr3_2:79158011-79158030 | None:intergenic | 40.0% |
| ! | TTTTTGAACGGCAATGATGG+AGG | - | chr3_2:79158012-79158031 | None:intergenic | 40.0% |
| ATCTTTAGCCTGCAATGAGA+GGG | - | chr3_2:79158154-79158173 | None:intergenic | 40.0% | |
| TGAACATACCCGAGAAGTAA+CGG | - | chr3_2:79158208-79158227 | None:intergenic | 40.0% | |
| ATGTTGGGAGATATCACTAC+TGG | + | chr3_2:79158334-79158353 | Msa0428320:CDS | 40.0% | |
| CGGCTATTATGTTCACTCAA+TGG | + | chr3_2:79158359-79158378 | Msa0428320:CDS | 40.0% | |
| CTCAATGGCTTCAATCAGTT+CGG | + | chr3_2:79158374-79158393 | Msa0428320:CDS | 40.0% | |
| ACTTCAAATCATCGTTCCTC+TGG | + | chr3_2:79158403-79158422 | Msa0428320:CDS | 40.0% | |
| GGCTAACATTCTACTTGCAA+AGG | - | chr3_2:79158550-79158569 | None:intergenic | 40.0% | |
| ! | TAGTCTTAGAGAATCTGCAG+AGG | + | chr3_2:79158879-79158898 | Msa0428320:intron | 40.0% |
| !! | ATTAGTTTGTGGGATAGGCT+TGG | + | chr3_2:79158937-79158956 | Msa0428320:CDS | 40.0% |
| GCTTGGTAAAGCTGAAATGT+TGG | + | chr3_2:79158954-79158973 | Msa0428320:CDS | 40.0% | |
| CTCAGAATGTTCATTGCTGA+TGG | - | chr3_2:79159040-79159059 | None:intergenic | 40.0% | |
| CATCAGCAATGAACATTCTG+AGG | + | chr3_2:79159038-79159057 | Msa0428320:CDS | 40.0% | |
| CTTCTCATTTGTGTCCACAT+AGG | + | chr3_2:79159367-79159386 | Msa0428320:intron | 40.0% | |
| ! | GGTAACTGTAAATTCTGGAG+GGG | + | chr3_2:79159388-79159407 | Msa0428320:intron | 40.0% |
| TTGGATATGAATTCGCGAAG+CGG | + | chr3_2:79159522-79159541 | Msa0428320:CDS | 40.0% | |
| ! | TATTTGGAGCCATTCCAAAC+TGG | - | chr3_2:79159679-79159698 | None:intergenic | 40.0% |
| AGAAAGCTGCAGAAAAAGCA+AGG | + | chr3_2:79159700-79159719 | Msa0428320:CDS | 40.0% | |
| GAAAGCTGCAGAAAAAGCAA+GGG | + | chr3_2:79159701-79159720 | Msa0428320:CDS | 40.0% | |
| ! | AACGACATGTTCCGAACTTT+TGG | + | chr3_2:79159758-79159777 | Msa0428320:CDS | 40.0% |
| CTCAAGTGCTTCCAAAAGTT+CGG | - | chr3_2:79159772-79159791 | None:intergenic | 40.0% | |
| AGATATCTTTGCTTGCCATG+AGG | + | chr3_2:79159880-79159899 | Msa0428320:intron | 40.0% | |
| AAGAGGTAACAAAAGCCTCA+TGG | - | chr3_2:79159898-79159917 | None:intergenic | 40.0% | |
| ATGTTCCGCTGTTCATGATA+GGG | + | chr3_2:79159939-79159958 | Msa0428320:intron | 40.0% | |
| !! | GCACCGCATTTGAAATTTTC+AGG | - | chr3_2:79159970-79159989 | None:intergenic | 40.0% |
| CGTTGCAGTAACCCAAATAT+AGG | - | chr3_2:79160006-79160025 | None:intergenic | 40.0% | |
| TAACATCATTACCCTGCCAA+GGG | - | chr3_2:79160401-79160420 | None:intergenic | 40.0% | |
| CGGCCAATAACAAATTTGCA+GGG | - | chr3_2:79160483-79160502 | None:intergenic | 40.0% | |
| TCGGCCAATAACAAATTTGC+AGG | - | chr3_2:79160484-79160503 | None:intergenic | 40.0% | |
| AGAGTCAATAGCCACAATGT+TGG | - | chr3_2:79160749-79160768 | None:intergenic | 40.0% | |
| !! | AACATTGTGGCTATTGACTC+TGG | + | chr3_2:79160748-79160767 | Msa0428320:CDS | 40.0% |
| GATATAACTGGAGGGAAGTT+AGG | + | chr3_2:79160880-79160899 | Msa0428320:CDS | 40.0% | |
| !! | TTAGGAAGTGCTGATGTACA+AGG | + | chr3_2:79160898-79160917 | Msa0428320:CDS | 40.0% |
| TTGTCACTCTCCAACAAGTA+AGG | + | chr3_2:79161119-79161138 | Msa0428320:CDS | 40.0% | |
| CTGAATCACAAGAATCTCGA+TGG | - | chr3_2:79161164-79161183 | None:intergenic | 40.0% | |
| ATTCACAGAGATCTGTTCCA+AGG | + | chr3_2:79161184-79161203 | Msa0428320:CDS | 40.0% | |
| TTCACAGAGATCTGTTCCAA+GGG | + | chr3_2:79161185-79161204 | Msa0428320:CDS | 40.0% | |
| GCTTCTCCTATATCAAGAGA+AGG | + | chr3_2:79161246-79161265 | Msa0428320:CDS | 40.0% | |
| AGTGCACCAAAACAATAACC+TGG | - | chr3_2:79161427-79161446 | None:intergenic | 40.0% | |
| AACTATTGTGGACAATGGCT+TGG | + | chr3_2:79161520-79161539 | Msa0428320:intron | 40.0% | |
| TGATGCTATCAAGTTATGCC+AGG | + | chr3_2:79161809-79161828 | Msa0428320:CDS | 40.0% | |
| GACTTGAGCATATCCTTGAA+AGG | + | chr3_2:79162005-79162024 | Msa0428320:CDS | 40.0% | |
| TGTACACACAATGCAACACT+TGG | + | chr3_2:79162117-79162136 | Msa0428320:CDS | 40.0% | |
| GTACACACAATGCAACACTT+GGG | + | chr3_2:79162118-79162137 | Msa0428320:CDS | 40.0% | |
| ! | AAAGGTTTTTGCACGAGAGT+TGG | + | chr3_2:79162272-79162291 | Msa0428320:intron | 40.0% |
| CACCTCTTAAGGTGAATAAG+TGG | + | chr3_2:79162351-79162370 | Msa0428320:intron | 40.0% | |
| CCTCTTAAGGTGAATAAGTG+GGG | + | chr3_2:79162353-79162372 | Msa0428320:intron | 40.0% | |
| TGCATTATATATGCAGGGGT+CGG | - | chr3_2:79162397-79162416 | None:intergenic | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+GGG | - | chr3_2:79162424-79162443 | None:intergenic | 40.0% |
| ATGAGCTTAACTCAGTTGGT+AGG | - | chr3_2:79162425-79162444 | None:intergenic | 40.0% | |
| TACCAACTGAGTTAAGCTCA+TGG | + | chr3_2:79162424-79162443 | Msa0428320:intron | 40.0% | |
| ACCAACTGAGTTAAGCTCAT+GGG | + | chr3_2:79162425-79162444 | Msa0428320:intron | 40.0% | |
| CTTGGCAGAATTTAAGAGGT+CGG | - | chr3_2:79162590-79162609 | None:intergenic | 40.0% | |
| TTTCACTCTTCTCTCTGAAC+AGG | + | chr3_2:79162630-79162649 | Msa0428320:intron | 40.0% | |
| GTATCAATGCAAGTGACATC+TGG | + | chr3_2:79163060-79163079 | Msa0428320:intron | 40.0% | |
| GCAATTGTGAATTGTGATGC+AGG | + | chr3_2:79163101-79163120 | Msa0428320:intron | 40.0% | |
| CCAGCATTCTTACCACATAT+AGG | - | chr3_2:79163286-79163305 | None:intergenic | 40.0% | |
| CCTATATGTGGTAAGAATGC+TGG | + | chr3_2:79163283-79163302 | Msa0428320:CDS | 40.0% | |
| !! | TGTTGATAGTGCCATGACAA+TGG | + | chr3_2:79163369-79163388 | Msa0428320:CDS | 40.0% |
| AATGAGATTGCCTTTGAGTG+GGG | - | chr3_2:79163447-79163466 | None:intergenic | 40.0% | |
| GAATGAGATTGCCTTTGAGT+GGG | - | chr3_2:79163448-79163467 | None:intergenic | 40.0% | |
| TGAATGAGATTGCCTTTGAG+TGG | - | chr3_2:79163449-79163468 | None:intergenic | 40.0% | |
| ! | TCTCTTTTCCCTCTCATTGC+AGG | + | chr3_2:79158143-79158162 | Msa0428320:CDS | 45.0% |
| GATCTTTAGCCTGCAATGAG+AGG | - | chr3_2:79158155-79158174 | None:intergenic | 45.0% | |
| AACAAACCAAAAGGGGAGAG+TGG | - | chr3_2:79158446-79158465 | None:intergenic | 45.0% | |
| !! | ATGACAGCTGCTGCTTCTTT+TGG | - | chr3_2:79159461-79159480 | None:intergenic | 45.0% |
| GCTTCGCGAATTCATATCCA+AGG | - | chr3_2:79159523-79159542 | None:intergenic | 45.0% | |
| ATATGAATTCGCGAAGCGGT+TGG | + | chr3_2:79159526-79159545 | Msa0428320:CDS | 45.0% | |
| TATGAATTCGCGAAGCGGTT+GGG | + | chr3_2:79159527-79159546 | Msa0428320:CDS | 45.0% | |
| AGTAAGAAGGGAACAACCTG+TGG | - | chr3_2:79159563-79159582 | None:intergenic | 45.0% | |
| !! | TGGAAGCACTTGAGCTTAGT+CGG | + | chr3_2:79159778-79159797 | Msa0428320:CDS | 45.0% |
| CATGTTCCGCTGTTCATGAT+AGG | + | chr3_2:79159938-79159957 | Msa0428320:intron | 45.0% | |
| TCATGCCCTATCATGAACAG+CGG | - | chr3_2:79159947-79159966 | None:intergenic | 45.0% | |
| CTCTAGCGCATTTGAATCAC+AGG | + | chr3_2:79160351-79160370 | Msa0428320:CDS | 45.0% | |
| GAAAGAATATCAGCAGCCCT+TGG | + | chr3_2:79160382-79160401 | Msa0428320:CDS | 45.0% | |
| CTAACATCATTACCCTGCCA+AGG | - | chr3_2:79160402-79160421 | None:intergenic | 45.0% | |
| TTGGGACGCTTCAGAAAGAA+AGG | + | chr3_2:79160581-79160600 | Msa0428320:CDS | 45.0% | |
| !! | GTTTACTGGCTCCAACATTG+TGG | + | chr3_2:79160735-79160754 | Msa0428320:CDS | 45.0% |
| ! | ATCTGCACGTTTTCCAGTTG+GGG | - | chr3_2:79160788-79160807 | None:intergenic | 45.0% |
| ! | CATCTGCACGTTTTCCAGTT+GGG | - | chr3_2:79160789-79160808 | None:intergenic | 45.0% |
| ! | TCATCTGCACGTTTTCCAGT+TGG | - | chr3_2:79160790-79160809 | None:intergenic | 45.0% |
| TGGAAAACGTGCAGATGATC+AGG | + | chr3_2:79160792-79160811 | Msa0428320:CDS | 45.0% | |
| ATTTGCCAAGGTTCGTCTCT+AGG | + | chr3_2:79161350-79161369 | Msa0428320:intron | 45.0% | |
| ACATTCGTAGAAGCAAGGTC+AGG | - | chr3_2:79161398-79161417 | None:intergenic | 45.0% | |
| ! | TGGCTTGGATGTGCTATTGT+TGG | + | chr3_2:79161535-79161554 | Msa0428320:intron | 45.0% |
| ! | GGATGTGCTATTGTTGGCTA+TGG | + | chr3_2:79161541-79161560 | Msa0428320:intron | 45.0% |
| GCACGGTAAAAGAAATGTCG+TGG | - | chr3_2:79161695-79161714 | None:intergenic | 45.0% | |
| CATATGCATCAACAACGGTG+TGG | - | chr3_2:79161875-79161894 | None:intergenic | 45.0% | |
| !! | TTTTTGGTCGAGTAGCCTAG+TGG | + | chr3_2:79162319-79162338 | Msa0428320:intron | 45.0% |
| GGCTAGAAGTTCACCTCTTA+AGG | + | chr3_2:79162340-79162359 | Msa0428320:intron | 45.0% | |
| CCCCACTTATTCACCTTAAG+AGG | - | chr3_2:79162356-79162375 | None:intergenic | 45.0% | |
| ATTATATATGCAGGGGTCGG+GGG | - | chr3_2:79162394-79162413 | None:intergenic | 45.0% | |
| CATTATATATGCAGGGGTCG+GGG | - | chr3_2:79162395-79162414 | None:intergenic | 45.0% | |
| GCATTATATATGCAGGGGTC+GGG | - | chr3_2:79162396-79162415 | None:intergenic | 45.0% | |
| CCAACTGAGTTAAGCTCATG+GGG | + | chr3_2:79162426-79162445 | Msa0428320:intron | 45.0% | |
| CGACCTCTTAAATTCTGCCA+AGG | + | chr3_2:79162588-79162607 | Msa0428320:intron | 45.0% | |
| ACTGCATGGGAAGGTTTCAA+TGG | + | chr3_2:79163225-79163244 | Msa0428320:CDS | 45.0% | |
| ATGGGAAGGTTTCAATGGAG+TGG | + | chr3_2:79163230-79163249 | Msa0428320:CDS | 45.0% | |
| ! | TCAAAGGGTTTTACCGGACA+AGG | - | chr3_2:79163710-79163729 | None:intergenic | 45.0% |
| !! | TTTAAAAAAAAATTATTCTA+AGG | - | chr3_2:79158755-79158774 | None:intergenic | 5.0% |
| AGAGGGAAAAGAGACCTACC+TGG | - | chr3_2:79158137-79158156 | None:intergenic | 50.0% | |
| CACCTCTCACCGTTACTTCT+CGG | + | chr3_2:79158196-79158215 | Msa0428320:CDS | 50.0% | |
| ACCTCTCACCGTTACTTCTC+GGG | + | chr3_2:79158197-79158216 | Msa0428320:CDS | 50.0% | |
| GGGAGATATCACTACTGGAC+CGG | + | chr3_2:79158339-79158358 | Msa0428320:CDS | 50.0% | |
| ! | CTTCTTCCACTCTCCCCTTT+TGG | + | chr3_2:79158437-79158456 | Msa0428320:CDS | 50.0% |
| AGGGAACAACCTGTGGAGTT+TGG | - | chr3_2:79159556-79159575 | None:intergenic | 50.0% | |
| !!! | GTCGGTGCCTCTTGTTTTTG+AGG | + | chr3_2:79159796-79159815 | Msa0428320:CDS | 50.0% |
| !!! | AGTTTTCAGCGTGGCTCTGA+TGG | + | chr3_2:79159850-79159869 | Msa0428320:intron | 50.0% |
| GCGCTAGAGCTTTCAAGCAA+AGG | - | chr3_2:79160340-79160359 | None:intergenic | 50.0% | |
| AATATCAGCAGCCCTTGGCA+GGG | + | chr3_2:79160387-79160406 | Msa0428320:CDS | 50.0% | |
| TTCCATGCCGTCAACTTAGG+TGG | + | chr3_2:79160449-79160468 | Msa0428320:CDS | 50.0% | |
| GCAATGAACCGATATGGGTC+CGG | + | chr3_2:79160553-79160572 | Msa0428320:CDS | 50.0% | |
| CAATGAACCGATATGGGTCC+GGG | + | chr3_2:79160554-79160573 | Msa0428320:CDS | 50.0% | |
| AATGAACCGATATGGGTCCG+GGG | + | chr3_2:79160555-79160574 | Msa0428320:CDS | 50.0% | |
| GGACGCTTCAGAAAGAAAGG+TGG | + | chr3_2:79160584-79160603 | Msa0428320:CDS | 50.0% | |
| ! | TCTGCACGTTTTCCAGTTGG+GGG | - | chr3_2:79160787-79160806 | None:intergenic | 50.0% |
| ACTGCGGAACTCACGAACTA+TGG | - | chr3_2:79160938-79160957 | None:intergenic | 50.0% | |
| ATAGTTCGTGAGTTCCGCAG+TGG | + | chr3_2:79160937-79160956 | Msa0428320:CDS | 50.0% | |
| !! | TGGTTTTCGTGCTGCTCTCA+TGG | + | chr3_2:79160957-79160976 | Msa0428320:CDS | 50.0% |
| ATCATCGGGGGAGTCTGAAA+AGG | + | chr3_2:79161068-79161087 | Msa0428320:CDS | 50.0% | |
| GATTCACCTTCACCTGCTAC+TGG | + | chr3_2:79161093-79161112 | Msa0428320:CDS | 50.0% | |
| CAACTACCAGTAGCAGGTGA+AGG | - | chr3_2:79161102-79161121 | None:intergenic | 50.0% | |
| GAGTGACAACTACCAGTAGC+AGG | - | chr3_2:79161108-79161127 | None:intergenic | 50.0% | |
| AGGCTCCACACTTCCTTTAG+AGG | - | chr3_2:79161286-79161305 | None:intergenic | 50.0% | |
| GTAAAGCGGGAACCAAGCAA+AGG | - | chr3_2:79161306-79161325 | None:intergenic | 50.0% | |
| TGCTACCTAGAGACGAACCT+TGG | - | chr3_2:79161358-79161377 | None:intergenic | 50.0% | |
| GAGGTGAACTTCTAGCCACT+AGG | - | chr3_2:79162337-79162356 | None:intergenic | 50.0% | |
| GGTGAATAAGTGGGGAATCC+CGG | + | chr3_2:79162361-79162380 | Msa0428320:intron | 50.0% | |
| GTGAATAAGTGGGGAATCCC+GGG | + | chr3_2:79162362-79162381 | Msa0428320:intron | 50.0% | |
| CCCCATGAGCTTAACTCAGT+TGG | - | chr3_2:79162429-79162448 | None:intergenic | 50.0% | |
| AACCATCATTAGGCTGCGCT+CGG | - | chr3_2:79163174-79163193 | None:intergenic | 50.0% | |
| AGGTTTCAATGGAGTGGCAG+CGG | + | chr3_2:79163236-79163255 | Msa0428320:CDS | 50.0% | |
| AAGAATGCTGGACTGAGCAG+CGG | + | chr3_2:79163295-79163314 | Msa0428320:CDS | 50.0% | |
| CTGCGGTTGAGTTTAACTGC+AGG | - | chr3_2:79163615-79163634 | None:intergenic | 50.0% | |
| CTGCAGTTAAACTCAACCGC+AGG | + | chr3_2:79163613-79163632 | Msa0428320:three_prime_UTR | 50.0% | |
| ! | TGAACGGCAATGATGGAGGG+AGG | - | chr3_2:79158008-79158027 | None:intergenic | 55.0% |
| ACCCGAGAAGTAACGGTGAG+AGG | - | chr3_2:79158201-79158220 | None:intergenic | 55.0% | |
| AGAAGAGCGAGGGAATCCAG+AGG | - | chr3_2:79158422-79158441 | None:intergenic | 55.0% | |
| GGAGAGTGGAAGAAGAGCGA+GGG | - | chr3_2:79158432-79158451 | None:intergenic | 55.0% | |
| GCAACACAGTCTGAACGCCT+TGG | + | chr3_2:79159503-79159522 | Msa0428320:CDS | 55.0% | |
| GTTGGGAGTCCAAACTCCAC+AGG | + | chr3_2:79159544-79159563 | Msa0428320:CDS | 55.0% | |
| GAATATCAGCAGCCCTTGGC+AGG | + | chr3_2:79160386-79160405 | Msa0428320:CDS | 55.0% | |
| GGCTTCCATGCCGTCAACTT+AGG | + | chr3_2:79160446-79160465 | Msa0428320:CDS | 55.0% | |
| ! | TCCCACGCCACCTAAGTTGA+CGG | - | chr3_2:79160459-79160478 | None:intergenic | 55.0% |
| CAATCACCCCGGACCCATAT+CGG | - | chr3_2:79160564-79160583 | None:intergenic | 55.0% | |
| GATATGGGTCCGGGGTGATT+GGG | + | chr3_2:79160563-79160582 | Msa0428320:CDS | 55.0% | |
| GAGCAGCACGAAAACCACTG+CGG | - | chr3_2:79160954-79160973 | None:intergenic | 55.0% | |
| GCTGCTCTCATGGATCTGCA+AGG | + | chr3_2:79160967-79160986 | Msa0428320:CDS | 55.0% | |
| ! | CCTGAAGATGGTGATGCCCT+TGG | - | chr3_2:79161204-79161223 | None:intergenic | 55.0% |
| !! | CCAAGGGCATCACCATCTTC+AGG | + | chr3_2:79161201-79161220 | Msa0428320:CDS | 55.0% |
| ! | GGAAGTGTGGAGCCTTTGCT+TGG | + | chr3_2:79161291-79161310 | Msa0428320:CDS | 55.0% |
| GCGGAGCTTAGCTGTAAAGC+GGG | - | chr3_2:79161319-79161338 | None:intergenic | 55.0% | |
| CGCGGAGCTTAGCTGTAAAG+CGG | - | chr3_2:79161320-79161339 | None:intergenic | 55.0% | |
| TTTCAATGGAGTGGCAGCGG+CGG | + | chr3_2:79163239-79163258 | Msa0428320:CDS | 55.0% | |
| !! | GCGTAAATGATGGACCCTGC+AGG | + | chr3_2:79163680-79163699 | Msa0428320:three_prime_UTR | 55.0% |
| ! | GCAATGATGGAGGGAGGAGC+CGG | - | chr3_2:79158002-79158021 | None:intergenic | 60.0% |
| GGGAGAGTGGAAGAAGAGCG+AGG | - | chr3_2:79158433-79158452 | None:intergenic | 60.0% | |
| ! | TGCTGATGGCGTGCTCTGTG+TGG | - | chr3_2:79159026-79159045 | None:intergenic | 60.0% |
| ! | CGCCACCTAAGTTGACGGCA+TGG | - | chr3_2:79160454-79160473 | None:intergenic | 60.0% |
| TGCCGTCAACTTAGGTGGCG+TGG | + | chr3_2:79160454-79160473 | Msa0428320:CDS | 60.0% | |
| GCCGTCAACTTAGGTGGCGT+GGG | + | chr3_2:79160455-79160474 | Msa0428320:CDS | 60.0% | |
| CGATATGGGTCCGGGGTGAT+TGG | + | chr3_2:79160562-79160581 | Msa0428320:CDS | 60.0% | |
| ! | CTGAAGCGTCCCAATCACCC+CGG | - | chr3_2:79160575-79160594 | None:intergenic | 60.0% |
| TTTCCAGTTGGGGGTCGACG+AGG | - | chr3_2:79160778-79160797 | None:intergenic | 60.0% | |
| AGCCGAGCGCAGCCTAATGA+TGG | + | chr3_2:79163169-79163188 | Msa0428320:CDS | 60.0% | |
| GGAGAGTCAGCCCCACTCAA+AGG | + | chr3_2:79163434-79163453 | Msa0428320:CDS | 60.0% | |
| CCGGACAAGGATTGCCTGCA+GGG | - | chr3_2:79163697-79163716 | None:intergenic | 60.0% | |
| CCCTGCAGGCAATCCTTGTC+CGG | + | chr3_2:79163694-79163713 | Msa0428320:three_prime_UTR | 60.0% | |
| ACCGGACAAGGATTGCCTGC+AGG | - | chr3_2:79163698-79163717 | None:intergenic | 60.0% | |
| AGGGAGGAGCCGGAGAAAGG+GGG | - | chr3_2:79157992-79158011 | None:intergenic | 65.0% | |
| GAGGGAGGAGCCGGAGAAAG+GGG | - | chr3_2:79157993-79158012 | None:intergenic | 65.0% | |
| GGAGGGAGGAGCCGGAGAAA+GGG | - | chr3_2:79157994-79158013 | None:intergenic | 65.0% | |
| TGGAGGGAGGAGCCGGAGAA+AGG | - | chr3_2:79157995-79158014 | None:intergenic | 65.0% | |
| GTTCCTCGTCGACCCCCAAC+TGG | + | chr3_2:79160772-79160791 | Msa0428320:CDS | 65.0% | |
| ! | TGGGGCTGACTCTCCCACCA+CGG | - | chr3_2:79163429-79163448 | None:intergenic | 65.0% |
| GGGAGGAGCCGGAGAAAGGG+GGG | - | chr3_2:79157991-79158010 | None:intergenic | 70.0% | |
| AGGGGTCGGGGGTTCGAACC+CGG | - | chr3_2:79162383-79162402 | None:intergenic | 70.0% | |
| GGGGTCGGGGGTTCGAACCC+GGG | - | chr3_2:79162382-79162401 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 79157881 | 79163730 | 79157881 | ID=Msa0428320;Name=Msa0428320 |
| chr3_2 | mRNA | 79157881 | 79163730 | 79157881 | ID=Msa0428320-mRNA-1;Parent=Msa0428320;Name=Msa0428320-mRNA-1;_AED=0.03;_eAED=0.03;_QI=179|1|1|1|0.9|0.81|11|250|910 |
| chr3_2 | exon | 79157881 | 79157905 | 79157881 | ID=Msa0428320-mRNA-1:exon:21210;Parent=Msa0428320-mRNA-1 |
| chr3_2 | exon | 79157936 | 79158218 | 79157936 | ID=Msa0428320-mRNA-1:exon:21211;Parent=Msa0428320-mRNA-1 |
| chr3_2 | exon | 79158325 | 79158458 | 79158325 | ID=Msa0428320-mRNA-1:exon:21212;Parent=Msa0428320-mRNA-1 |
| chr3_2 | exon | 79158882 | 79159083 | 79158882 | ID=Msa0428320-mRNA-1:exon:21213;Parent=Msa0428320-mRNA-1 |
| chr3_2 | exon | 79159389 | 79159565 | 79159389 | ID=Msa0428320-mRNA-1:exon:21214;Parent=Msa0428320-mRNA-1 |
| chr3_2 | exon | 79159657 | 79159817 | 79159657 | ID=Msa0428320-mRNA-1:exon:21215;Parent=Msa0428320-mRNA-1 |
| chr3_2 | exon | 79160321 | 79161359 | 79160321 | ID=Msa0428320-mRNA-1:exon:21216;Parent=Msa0428320-mRNA-1 |
| chr3_2 | exon | 79161756 | 79161902 | 79161756 | ID=Msa0428320-mRNA-1:exon:21217;Parent=Msa0428320-mRNA-1 |
| chr3_2 | exon | 79162001 | 79162228 | 79162001 | ID=Msa0428320-mRNA-1:exon:21218;Parent=Msa0428320-mRNA-1 |
| chr3_2 | exon | 79162652 | 79162809 | 79162652 | ID=Msa0428320-mRNA-1:exon:21219;Parent=Msa0428320-mRNA-1 |
| chr3_2 | exon | 79163123 | 79163730 | 79163123 | ID=Msa0428320-mRNA-1:exon:21220;Parent=Msa0428320-mRNA-1 |
| chr3_2 | five_prime_UTR | 79157881 | 79157905 | 79157881 | ID=Msa0428320-mRNA-1:five_prime_utr;Parent=Msa0428320-mRNA-1 |
| chr3_2 | five_prime_UTR | 79157936 | 79158089 | 79157936 | ID=Msa0428320-mRNA-1:five_prime_utr;Parent=Msa0428320-mRNA-1 |
| chr3_2 | CDS | 79158090 | 79158218 | 79158090 | ID=Msa0428320-mRNA-1:cds;Parent=Msa0428320-mRNA-1 |
| chr3_2 | CDS | 79158325 | 79158458 | 79158325 | ID=Msa0428320-mRNA-1:cds;Parent=Msa0428320-mRNA-1 |
| chr3_2 | CDS | 79158882 | 79159083 | 79158882 | ID=Msa0428320-mRNA-1:cds;Parent=Msa0428320-mRNA-1 |
| chr3_2 | CDS | 79159389 | 79159565 | 79159389 | ID=Msa0428320-mRNA-1:cds;Parent=Msa0428320-mRNA-1 |
| chr3_2 | CDS | 79159657 | 79159817 | 79159657 | ID=Msa0428320-mRNA-1:cds;Parent=Msa0428320-mRNA-1 |
| chr3_2 | CDS | 79160321 | 79161359 | 79160321 | ID=Msa0428320-mRNA-1:cds;Parent=Msa0428320-mRNA-1 |
| chr3_2 | CDS | 79161756 | 79161902 | 79161756 | ID=Msa0428320-mRNA-1:cds;Parent=Msa0428320-mRNA-1 |
| chr3_2 | CDS | 79162001 | 79162228 | 79162001 | ID=Msa0428320-mRNA-1:cds;Parent=Msa0428320-mRNA-1 |
| chr3_2 | CDS | 79162652 | 79162809 | 79162652 | ID=Msa0428320-mRNA-1:cds;Parent=Msa0428320-mRNA-1 |
| chr3_2 | CDS | 79163123 | 79163480 | 79163123 | ID=Msa0428320-mRNA-1:cds;Parent=Msa0428320-mRNA-1 |
| chr3_2 | three_prime_UTR | 79163481 | 79163730 | 79163481 | ID=Msa0428320-mRNA-1:three_prime_utr;Parent=Msa0428320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
