Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430570 | KEH35768.1 | 88.580 | 324 | 24 | 2 | 1 | 311 | 1 | 324 | 0.0 | 555 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430570 | sp|P25010|CCNAL_DAUCA | 51.070 | 327 | 124 | 6 | 20 | 311 | 13 | 338 | 5.83e-104 | 310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430570 | A0A072V341 | 88.580 | 324 | 24 | 2 | 1 | 311 | 1 | 324 | 0.0 | 555 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0430570 | Msa0500270 | 0.827792 | 1.286527e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430570 | MtrunA17_Chr3g0134441 | 86.018 | 329 | 28 | 3 | 1 | 311 | 1 | 329 | 0.0 | 540 |
| Msa0430570 | MtrunA17_Chr3g0134401 | 54.810 | 343 | 116 | 9 | 2 | 311 | 1 | 337 | 3.59e-115 | 336 |
| Msa0430570 | MtrunA17_Chr3g0134431 | 70.435 | 230 | 60 | 1 | 64 | 293 | 14 | 235 | 4.48e-114 | 330 |
| Msa0430570 | MtrunA17_Chr1g0152871 | 50.872 | 344 | 132 | 6 | 5 | 311 | 14 | 357 | 2.83e-113 | 332 |
| Msa0430570 | MtrunA17_Chr3g0134421 | 52.273 | 352 | 123 | 8 | 2 | 311 | 1 | 349 | 5.39e-110 | 323 |
| Msa0430570 | MtrunA17_Chr3g0134411 | 50.556 | 360 | 124 | 8 | 2 | 311 | 1 | 356 | 2.63e-109 | 322 |
| Msa0430570 | MtrunA17_Chr3g0125051 | 50.575 | 261 | 114 | 3 | 64 | 311 | 245 | 503 | 1.93e-82 | 258 |
| Msa0430570 | MtrunA17_Chr3g0125041 | 45.238 | 294 | 135 | 7 | 38 | 311 | 221 | 508 | 1.43e-76 | 243 |
| Msa0430570 | MtrunA17_Chr3g0138431 | 50.394 | 254 | 111 | 4 | 64 | 304 | 218 | 469 | 3.64e-75 | 238 |
| Msa0430570 | MtrunA17_Chr1g0148681 | 45.424 | 295 | 140 | 5 | 28 | 304 | 121 | 412 | 1.41e-73 | 232 |
| Msa0430570 | MtrunA17_Chr2g0332181 | 45.211 | 261 | 127 | 4 | 64 | 311 | 172 | 429 | 5.28e-67 | 216 |
| Msa0430570 | MtrunA17_Chr2g0332171 | 45.882 | 255 | 121 | 5 | 64 | 303 | 226 | 478 | 2.99e-66 | 215 |
| Msa0430570 | MtrunA17_Chr5g0441371 | 36.471 | 255 | 149 | 5 | 44 | 289 | 150 | 400 | 8.03e-42 | 149 |
| Msa0430570 | MtrunA17_Chr8g0370671 | 35.160 | 219 | 135 | 1 | 87 | 298 | 201 | 419 | 2.28e-41 | 148 |
| Msa0430570 | MtrunA17_Chr5g0406741 | 34.538 | 249 | 153 | 3 | 57 | 298 | 170 | 415 | 2.61e-40 | 145 |
| Msa0430570 | MtrunA17_Chr7g0255771 | 34.156 | 243 | 145 | 4 | 72 | 301 | 210 | 450 | 4.50e-39 | 143 |
| Msa0430570 | MtrunA17_Chr8g0357001 | 34.673 | 199 | 122 | 2 | 73 | 264 | 498 | 695 | 2.53e-30 | 120 |
| Msa0430570 | MtrunA17_Chr3g0102851 | 30.516 | 213 | 133 | 5 | 90 | 287 | 56 | 268 | 1.24e-17 | 81.6 |
| Msa0430570 | MtrunA17_Chr3g0103471 | 31.937 | 191 | 116 | 4 | 90 | 266 | 46 | 236 | 1.57e-17 | 80.9 |
| Msa0430570 | MtrunA17_Chr3g0102861 | 30.769 | 208 | 122 | 5 | 90 | 275 | 46 | 253 | 1.77e-17 | 80.9 |
| Msa0430570 | MtrunA17_Chr3g0102621 | 29.545 | 220 | 132 | 7 | 90 | 292 | 52 | 265 | 2.34e-16 | 77.8 |
| Msa0430570 | MtrunA17_Chr5g0418901 | 36.709 | 79 | 50 | 0 | 116 | 194 | 7 | 85 | 3.33e-13 | 64.7 |
| Msa0430570 | MtrunA17_Chr3g0102631 | 31.429 | 175 | 102 | 5 | 114 | 272 | 3 | 175 | 4.97e-12 | 64.3 |
| Msa0430570 | MtrunA17_Chr3g0102651 | 31.429 | 175 | 102 | 5 | 114 | 272 | 3 | 175 | 4.97e-12 | 64.3 |
| Msa0430570 | MtrunA17_Chr3g0102661 | 31.429 | 175 | 102 | 5 | 114 | 272 | 3 | 175 | 4.97e-12 | 64.3 |
| Msa0430570 | MtrunA17_Chr3g0102671 | 31.429 | 175 | 102 | 5 | 114 | 272 | 3 | 175 | 4.97e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430570 | AT5G43080.2 | 47.917 | 336 | 145 | 5 | 4 | 311 | 12 | 345 | 1.21e-104 | 310 |
| Msa0430570 | AT5G43080.1 | 48.246 | 342 | 140 | 7 | 4 | 311 | 12 | 350 | 1.21e-103 | 307 |
| Msa0430570 | AT1G47230.1 | 46.991 | 349 | 140 | 6 | 6 | 311 | 14 | 360 | 9.86e-103 | 305 |
| Msa0430570 | AT1G47230.2 | 46.857 | 350 | 140 | 7 | 6 | 311 | 14 | 361 | 6.78e-101 | 301 |
| Msa0430570 | AT1G47210.2 | 44.633 | 354 | 145 | 8 | 4 | 307 | 11 | 363 | 2.89e-96 | 289 |
| Msa0430570 | AT1G47220.1 | 50.175 | 285 | 122 | 4 | 42 | 307 | 34 | 317 | 2.31e-88 | 267 |
| Msa0430570 | AT1G44110.1 | 45.048 | 313 | 149 | 5 | 12 | 311 | 155 | 457 | 7.66e-78 | 244 |
| Msa0430570 | AT5G11300.1 | 52.209 | 249 | 106 | 3 | 73 | 308 | 184 | 432 | 1.32e-75 | 238 |
| Msa0430570 | AT5G25380.3 | 48.872 | 266 | 119 | 4 | 55 | 306 | 169 | 431 | 1.91e-72 | 230 |
| Msa0430570 | AT5G25380.1 | 48.872 | 266 | 119 | 4 | 55 | 306 | 169 | 431 | 1.91e-72 | 230 |
| Msa0430570 | AT5G25380.4 | 48.872 | 266 | 119 | 4 | 55 | 306 | 175 | 437 | 2.59e-72 | 230 |
| Msa0430570 | AT1G15570.1 | 48.361 | 244 | 113 | 2 | 73 | 303 | 200 | 443 | 3.82e-71 | 227 |
| Msa0430570 | AT1G80370.1 | 48.810 | 252 | 115 | 4 | 73 | 311 | 209 | 459 | 3.28e-70 | 225 |
| Msa0430570 | AT5G25380.2 | 48.617 | 253 | 113 | 4 | 55 | 293 | 169 | 418 | 1.59e-67 | 217 |
| Msa0430570 | AT1G77390.1 | 44.828 | 261 | 129 | 3 | 64 | 311 | 183 | 441 | 4.91e-66 | 214 |
| Msa0430570 | AT5G11300.2 | 57.222 | 180 | 72 | 2 | 73 | 247 | 184 | 363 | 8.87e-61 | 199 |
| Msa0430570 | AT5G06150.1 | 33.225 | 307 | 192 | 4 | 1 | 298 | 122 | 424 | 1.06e-42 | 152 |
| Msa0430570 | AT3G11520.1 | 40.179 | 224 | 126 | 2 | 87 | 303 | 183 | 405 | 1.19e-42 | 152 |
| Msa0430570 | AT4G37490.1 | 35.842 | 279 | 160 | 7 | 38 | 301 | 142 | 416 | 9.03e-42 | 150 |
| Msa0430570 | AT3G11520.2 | 43.229 | 192 | 102 | 1 | 87 | 271 | 183 | 374 | 1.32e-40 | 145 |
| Msa0430570 | AT2G26760.1 | 38.889 | 252 | 141 | 5 | 60 | 302 | 131 | 378 | 1.54e-39 | 143 |
| Msa0430570 | AT1G20610.1 | 35.160 | 219 | 135 | 1 | 87 | 298 | 202 | 420 | 9.29e-39 | 142 |
| Msa0430570 | AT1G76310.1 | 35.965 | 228 | 137 | 3 | 81 | 300 | 197 | 423 | 2.51e-38 | 140 |
| Msa0430570 | AT4G35620.1 | 38.197 | 233 | 136 | 2 | 81 | 306 | 192 | 423 | 1.63e-36 | 135 |
| Msa0430570 | AT2G17620.1 | 37.354 | 257 | 151 | 4 | 60 | 309 | 172 | 425 | 2.86e-36 | 135 |
| Msa0430570 | AT1G47210.1 | 40.659 | 182 | 72 | 5 | 4 | 149 | 11 | 192 | 6.43e-35 | 125 |
| Msa0430570 | AT1G16330.1 | 33.654 | 208 | 131 | 1 | 89 | 289 | 422 | 629 | 3.88e-34 | 132 |
| Msa0430570 | AT1G76310.2 | 38.983 | 177 | 106 | 2 | 81 | 256 | 197 | 372 | 1.47e-33 | 127 |
| Msa0430570 | AT4G35620.2 | 43.503 | 177 | 99 | 1 | 81 | 257 | 192 | 367 | 2.52e-33 | 126 |
| Msa0430570 | AT1G76310.3 | 30.686 | 277 | 153 | 5 | 60 | 300 | 178 | 451 | 1.30e-32 | 125 |
| Msa0430570 | AT5G06150.2 | 35.323 | 201 | 124 | 3 | 1 | 199 | 122 | 318 | 5.51e-29 | 114 |
| Msa0430570 | AT1G76310.4 | 40.559 | 143 | 81 | 3 | 60 | 201 | 178 | 317 | 1.98e-25 | 104 |
| Msa0430570 | AT1G20590.1 | 35.762 | 151 | 90 | 1 | 123 | 266 | 66 | 216 | 4.18e-23 | 96.7 |
| Msa0430570 | AT1G14750.4 | 31.507 | 219 | 132 | 7 | 65 | 267 | 184 | 400 | 3.76e-16 | 79.0 |
| Msa0430570 | AT1G14750.2 | 30.594 | 219 | 135 | 6 | 65 | 267 | 184 | 401 | 4.47e-16 | 78.6 |
| Msa0430570 | AT1G14750.3 | 29.864 | 221 | 140 | 5 | 65 | 270 | 352 | 572 | 5.61e-16 | 79.0 |
| Msa0430570 | AT1G14750.1 | 30.275 | 218 | 137 | 5 | 65 | 267 | 352 | 569 | 9.76e-16 | 78.2 |
| Msa0430570 | AT1G34460.9 | 31.325 | 166 | 81 | 4 | 34 | 199 | 242 | 374 | 4.62e-13 | 69.7 |
| Msa0430570 | AT1G34460.7 | 31.325 | 166 | 81 | 4 | 34 | 199 | 256 | 388 | 5.79e-13 | 69.7 |
| Msa0430570 | AT1G34460.2 | 31.325 | 166 | 81 | 4 | 34 | 199 | 253 | 385 | 5.87e-13 | 69.7 |
| Msa0430570 | AT1G34460.4 | 31.325 | 166 | 81 | 4 | 34 | 199 | 253 | 385 | 5.87e-13 | 69.7 |
| Msa0430570 | AT1G34460.6 | 31.325 | 166 | 81 | 4 | 34 | 199 | 256 | 388 | 5.88e-13 | 69.7 |
| Msa0430570 | AT1G34460.3 | 31.325 | 166 | 81 | 4 | 34 | 199 | 256 | 388 | 5.88e-13 | 69.7 |
| Msa0430570 | AT1G34460.8 | 31.325 | 166 | 81 | 4 | 34 | 199 | 256 | 388 | 5.88e-13 | 69.7 |
| Msa0430570 | AT1G34460.1 | 31.325 | 166 | 81 | 4 | 34 | 199 | 256 | 388 | 5.88e-13 | 69.7 |
| Msa0430570 | AT1G34460.5 | 31.325 | 166 | 81 | 4 | 34 | 199 | 256 | 388 | 5.94e-13 | 69.7 |
Find 55 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCTGAGCTAAGTTTAT+TGG | 0.148419 | 3_2:-82448156 | Msa0430570:CDS |
| CACGTTTATTCATGTGATTT+TGG | 0.168414 | 3_2:+82449504 | None:intergenic |
| TGTGAGATTCTTGCCTTCTT+TGG | 0.236242 | 3_2:-82448123 | Msa0430570:CDS |
| TCGCTGTTTCTTACATAGAT+AGG | 0.328623 | 3_2:-82449095 | Msa0430570:CDS |
| AATGAGATTGGTTGTTGAAT+TGG | 0.331057 | 3_2:+82449463 | None:intergenic |
| TGAGAGGAATATTGATTGAT+TGG | 0.331773 | 3_2:-82449167 | Msa0430570:CDS |
| CAAGACCCTAGATAATGATA+TGG | 0.336031 | 3_2:-82448491 | Msa0430570:CDS |
| TGAAGCTTGACCCTATTGAT+AGG | 0.352654 | 3_2:+82449057 | None:intergenic |
| AAATAATTAATAAACAGATT+TGG | 0.374757 | 3_2:+82448429 | None:intergenic |
| TATACCCAGAGTATTCTTGC+AGG | 0.389030 | 3_2:+82447914 | None:intergenic |
| ACGCATTCCTTCAACTCAAC+TGG | 0.389273 | 3_2:+82447889 | None:intergenic |
| CGATTGAGAAACAATGAGAT+TGG | 0.404565 | 3_2:+82449451 | None:intergenic |
| GACTGCCCATATCATTATCT+AGG | 0.425727 | 3_2:+82448485 | None:intergenic |
| ATGAGATTGGTTGTTGAATT+GGG | 0.429099 | 3_2:+82449464 | None:intergenic |
| TAGGGTCAAGCTTCAATTGT+TGG | 0.434090 | 3_2:-82449049 | Msa0430570:CDS |
| GAGATTCTTGCCTTCTTTGG+TGG | 0.445209 | 3_2:-82448120 | Msa0430570:CDS |
| ATCTCCATGTAATCCTTCAT+TGG | 0.446797 | 3_2:+82449216 | None:intergenic |
| TTATAAGCACTAGAAACAAC+TGG | 0.474116 | 3_2:+82449374 | None:intergenic |
| AGGGTCAAGCTTCAATTGTT+GGG | 0.475156 | 3_2:-82449048 | Msa0430570:CDS |
| GTATAAACCAGTTGAGTTGA+AGG | 0.485366 | 3_2:-82447896 | Msa0430570:CDS |
| ATCGACGCAGCCACCAAAGA+AGG | 0.504235 | 3_2:+82448110 | None:intergenic |
| AAAGCATAATTCTTCGACAT+GGG | 0.505661 | 3_2:+82448880 | None:intergenic |
| AACAGATCACTTGGTAAATG+AGG | 0.505822 | 3_2:+82447682 | None:intergenic |
| AAGGGTCATTTGAAGCTACT+CGG | 0.518059 | 3_2:-82447831 | Msa0430570:CDS |
| TCAGCCCTGCAAGAATACTC+TGG | 0.519125 | 3_2:-82447919 | Msa0430570:CDS |
| CATAATTCTTCGACATGGGG+TGG | 0.521855 | 3_2:+82448884 | None:intergenic |
| GGCTTACGATGCAATGTACA+TGG | 0.535999 | 3_2:+82449017 | None:intergenic |
| CTTGGTAAATGAGGAGGTGA+AGG | 0.539553 | 3_2:+82447691 | None:intergenic |
| GACAAAGAGAAGACCAATGA+AGG | 0.540350 | 3_2:-82449229 | Msa0430570:CDS |
| GAAGCTTGACCCTATTGATA+GGG | 0.540822 | 3_2:+82449058 | None:intergenic |
| AAGACCCTAGATAATGATAT+GGG | 0.542783 | 3_2:-82448490 | Msa0430570:CDS |
| AAGACCAATGAAGGATTACA+TGG | 0.547107 | 3_2:-82449220 | Msa0430570:CDS |
| GACCCATAAGATTACCTCCA+TGG | 0.557990 | 3_2:+82449340 | None:intergenic |
| CTGTATATGTCAAGACGGGA+AGG | 0.561150 | 3_2:-82447850 | Msa0430570:CDS |
| TCAAATTAAAACAGATCACT+TGG | 0.561830 | 3_2:+82447673 | None:intergenic |
| CAGCCCTGCAAGAATACTCT+GGG | 0.579144 | 3_2:-82447918 | Msa0430570:CDS |
| TTATAACTATCTTCGATCCA+TGG | 0.584174 | 3_2:-82449357 | Msa0430570:CDS |
| ATAATTCTTCGACATGGGGT+GGG | 0.585139 | 3_2:+82448885 | None:intergenic |
| AGGGTCATTTGAAGCTACTC+GGG | 0.585830 | 3_2:-82447830 | Msa0430570:CDS |
| ATGATCTGTATATGTCAAGA+CGG | 0.591093 | 3_2:-82447855 | Msa0430570:CDS |
| TGATCTGTATATGTCAAGAC+GGG | 0.596030 | 3_2:-82447854 | Msa0430570:CDS |
| ATACCCAGAGTATTCTTGCA+GGG | 0.596799 | 3_2:+82447915 | None:intergenic |
| ACTGCCCATATCATTATCTA+GGG | 0.603439 | 3_2:+82448486 | None:intergenic |
| GGAGAAATACAAGCAGTACA+AGG | 0.603442 | 3_2:-82447809 | Msa0430570:intron |
| GTAAATGAGGAGGTGAAGGG+AGG | 0.617134 | 3_2:+82447695 | None:intergenic |
| TAAAGCATAATTCTTCGACA+TGG | 0.621082 | 3_2:+82448879 | None:intergenic |
| TTGGTAAATGAGGAGGTGAA+GGG | 0.628975 | 3_2:+82447692 | None:intergenic |
| CATGAATAAACGTGTCGTGT+TGG | 0.630550 | 3_2:-82449495 | Msa0430570:CDS |
| AGATCACTTGGTAAATGAGG+AGG | 0.631054 | 3_2:+82447685 | None:intergenic |
| AAGCATAATTCTTCGACATG+GGG | 0.631386 | 3_2:+82448881 | None:intergenic |
| TTGAGACTCGCTCTGCAAAG+AGG | 0.648697 | 3_2:-82449541 | Msa0430570:CDS |
| TGTATATGTCAAGACGGGAA+GGG | 0.652672 | 3_2:-82447849 | Msa0430570:CDS |
| ATTGTAACAGTTCAAATACG+TGG | 0.709700 | 3_2:-82447722 | Msa0430570:intron |
| TAACTATCTTCGATCCATGG+AGG | 0.713647 | 3_2:-82449354 | Msa0430570:intron |
| TAATACATACAACAGAGACG+AGG | 0.764399 | 3_2:-82448849 | Msa0430570:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTTTAAAAAAA+AGG | + | chr3_2:82447933-82447952 | None:intergenic | 0.0% |
| !!! | AATTTTTTTTTTTAAAAAAA+AGG | + | chr3_2:82447933-82447952 | None:intergenic | 0.0% |
| !!! | TTTGATTTTTTTTTTTTAGA+TGG | - | chr3_2:82447970-82447989 | Msa0430570:intron | 10.0% |
| !! | AAATAATTAATAAACAGATT+TGG | + | chr3_2:82448797-82448816 | None:intergenic | 10.0% |
| !!! | TTTGATTTTTTTTTTTTAGA+TGG | - | chr3_2:82447970-82447989 | Msa0430570:intron | 10.0% |
| !! | AAATAATTAATAAACAGATT+TGG | + | chr3_2:82448797-82448816 | None:intergenic | 10.0% |
| !! | ATTATTTGCAAAATTCAAAT+CGG | + | chr3_2:82448240-82448259 | None:intergenic | 15.0% |
| !!! | CTTATTTTTTCGATTATAAA+AGG | - | chr3_2:82448298-82448317 | Msa0430570:intron | 15.0% |
| !!! | AACAAATTTAAATCTTCTTT+TGG | + | chr3_2:82448628-82448647 | None:intergenic | 15.0% |
| !! | ATTATTTGCAAAATTCAAAT+CGG | + | chr3_2:82448240-82448259 | None:intergenic | 15.0% |
| !!! | CTTATTTTTTCGATTATAAA+AGG | - | chr3_2:82448298-82448317 | Msa0430570:intron | 15.0% |
| !!! | AACAAATTTAAATCTTCTTT+TGG | + | chr3_2:82448628-82448647 | None:intergenic | 15.0% |
| !!! | TTTCAGATCATAAAAAGTAT+CGG | + | chr3_2:82448417-82448436 | None:intergenic | 20.0% |
| !!! | TATAATTGAGATCCTTTTTA+GGG | + | chr3_2:82448559-82448578 | None:intergenic | 20.0% |
| !!! | ATATAATTGAGATCCTTTTT+AGG | + | chr3_2:82448560-82448579 | None:intergenic | 20.0% |
| !! | GTATTTGATCATATAGTTAA+TGG | - | chr3_2:82449186-82449205 | Msa0430570:CDS | 20.0% |
| !! | TATTACCAAATTAACATAGA+TGG | - | chr3_2:82449234-82449253 | Msa0430570:CDS | 20.0% |
| !!! | TTTCAGATCATAAAAAGTAT+CGG | + | chr3_2:82448417-82448436 | None:intergenic | 20.0% |
| !!! | TATAATTGAGATCCTTTTTA+GGG | + | chr3_2:82448559-82448578 | None:intergenic | 20.0% |
| !!! | ATATAATTGAGATCCTTTTT+AGG | + | chr3_2:82448560-82448579 | None:intergenic | 20.0% |
| !! | GTATTTGATCATATAGTTAA+TGG | - | chr3_2:82449186-82449205 | Msa0430570:CDS | 20.0% |
| !! | TATTACCAAATTAACATAGA+TGG | - | chr3_2:82449234-82449253 | Msa0430570:CDS | 20.0% |
| !! | ACGTTTATTCATGTGATTTT+GGG | + | chr3_2:82447721-82447740 | None:intergenic | 25.0% |
| !! | ATCAATATTCCTCTCATTTT+TGG | + | chr3_2:82448052-82448071 | None:intergenic | 25.0% |
| ! | TATTGATAGGGTAAAAAGAT+AGG | + | chr3_2:82448156-82448175 | None:intergenic | 25.0% |
| !! | TATCTTTTTACCCTATCAAT+AGG | - | chr3_2:82448155-82448174 | Msa0430570:CDS | 25.0% |
| !! | ATCTTTTTACCCTATCAATA+GGG | - | chr3_2:82448156-82448175 | Msa0430570:CDS | 25.0% |
| ! | TAGTGAAATTATCAACATAG+TGG | - | chr3_2:82448437-82448456 | Msa0430570:intron | 25.0% |
| ! | AGTGAAATTATCAACATAGT+GGG | - | chr3_2:82448438-82448457 | Msa0430570:intron | 25.0% |
| ! | GACATAAGTGTTATATGTTT+GGG | - | chr3_2:82448460-82448479 | Msa0430570:CDS | 25.0% |
| !! | ATAATTGAGATCCTTTTTAG+GGG | + | chr3_2:82448558-82448577 | None:intergenic | 25.0% |
| !! | AATCTTCTTTTGGTAAACTA+AGG | + | chr3_2:82448618-82448637 | None:intergenic | 25.0% |
| ! | AAACAAGAGAAGCAAAATAA+GGG | + | chr3_2:82448670-82448689 | None:intergenic | 25.0% |
| ! | TAAACAAGAGAAGCAAAATA+AGG | + | chr3_2:82448671-82448690 | None:intergenic | 25.0% |
| ! | TTGTTTATTGCTATCAATAC+AGG | - | chr3_2:82448684-82448703 | Msa0430570:intron | 25.0% |
| ! | CTTAAAAAAGTCTTAACAGT+GGG | + | chr3_2:82448763-82448782 | None:intergenic | 25.0% |
| ! | TAAGAAGAAAAATGTGAGTT+AGG | - | chr3_2:82448913-82448932 | Msa0430570:intron | 25.0% |
| !! | TTATTTTCCTTCTTTCTTTC+AGG | - | chr3_2:82449010-82449029 | Msa0430570:intron | 25.0% |
| ! | ATCAACCATCTATGTTAATT+TGG | + | chr3_2:82449242-82449261 | None:intergenic | 25.0% |
| ! | AAATTAACATAGATGGTTGA+TGG | - | chr3_2:82449241-82449260 | Msa0430570:intron | 25.0% |
| !!! | ACATTCCTTAGACTTTATTT+TGG | - | chr3_2:82449452-82449471 | Msa0430570:CDS | 25.0% |
| ! | AATAGCCAAAATAAAGTCTA+AGG | + | chr3_2:82449460-82449479 | None:intergenic | 25.0% |
| !! | ACGTTTATTCATGTGATTTT+GGG | + | chr3_2:82447721-82447740 | None:intergenic | 25.0% |
| !! | ATCAATATTCCTCTCATTTT+TGG | + | chr3_2:82448052-82448071 | None:intergenic | 25.0% |
| ! | TATTGATAGGGTAAAAAGAT+AGG | + | chr3_2:82448156-82448175 | None:intergenic | 25.0% |
| !! | TATCTTTTTACCCTATCAAT+AGG | - | chr3_2:82448155-82448174 | Msa0430570:CDS | 25.0% |
| !! | ATCTTTTTACCCTATCAATA+GGG | - | chr3_2:82448156-82448175 | Msa0430570:CDS | 25.0% |
| ! | TAGTGAAATTATCAACATAG+TGG | - | chr3_2:82448437-82448456 | Msa0430570:intron | 25.0% |
| ! | AGTGAAATTATCAACATAGT+GGG | - | chr3_2:82448438-82448457 | Msa0430570:intron | 25.0% |
| ! | GACATAAGTGTTATATGTTT+GGG | - | chr3_2:82448460-82448479 | Msa0430570:CDS | 25.0% |
| !! | ATAATTGAGATCCTTTTTAG+GGG | + | chr3_2:82448558-82448577 | None:intergenic | 25.0% |
| !! | AATCTTCTTTTGGTAAACTA+AGG | + | chr3_2:82448618-82448637 | None:intergenic | 25.0% |
| ! | AAACAAGAGAAGCAAAATAA+GGG | + | chr3_2:82448670-82448689 | None:intergenic | 25.0% |
| ! | TAAACAAGAGAAGCAAAATA+AGG | + | chr3_2:82448671-82448690 | None:intergenic | 25.0% |
| ! | TTGTTTATTGCTATCAATAC+AGG | - | chr3_2:82448684-82448703 | Msa0430570:intron | 25.0% |
| ! | CTTAAAAAAGTCTTAACAGT+GGG | + | chr3_2:82448763-82448782 | None:intergenic | 25.0% |
| ! | TAAGAAGAAAAATGTGAGTT+AGG | - | chr3_2:82448913-82448932 | Msa0430570:intron | 25.0% |
| !! | TTATTTTCCTTCTTTCTTTC+AGG | - | chr3_2:82449010-82449029 | Msa0430570:intron | 25.0% |
| ! | ATCAACCATCTATGTTAATT+TGG | + | chr3_2:82449242-82449261 | None:intergenic | 25.0% |
| ! | AAATTAACATAGATGGTTGA+TGG | - | chr3_2:82449241-82449260 | Msa0430570:intron | 25.0% |
| !!! | ACATTCCTTAGACTTTATTT+TGG | - | chr3_2:82449452-82449471 | Msa0430570:CDS | 25.0% |
| ! | AATAGCCAAAATAAAGTCTA+AGG | + | chr3_2:82449460-82449479 | None:intergenic | 25.0% |
| ! | CACGTTTATTCATGTGATTT+TGG | + | chr3_2:82447722-82447741 | None:intergenic | 30.0% |
| ! | ATGAGATTGGTTGTTGAATT+GGG | + | chr3_2:82447762-82447781 | None:intergenic | 30.0% |
| ! | AATGAGATTGGTTGTTGAAT+TGG | + | chr3_2:82447763-82447782 | None:intergenic | 30.0% |
| TTATAAGCACTAGAAACAAC+TGG | + | chr3_2:82447852-82447871 | None:intergenic | 30.0% | |
| TTATAACTATCTTCGATCCA+TGG | - | chr3_2:82447866-82447885 | Msa0430570:CDS | 30.0% | |
| ! | TGAGAGGAATATTGATTGAT+TGG | - | chr3_2:82448056-82448075 | Msa0430570:intron | 30.0% |
| AAATTCAAATCGGACATAGA+AGG | + | chr3_2:82448230-82448249 | None:intergenic | 30.0% | |
| AAAGCATAATTCTTCGACAT+GGG | + | chr3_2:82448346-82448365 | None:intergenic | 30.0% | |
| TAAAGCATAATTCTTCGACA+TGG | + | chr3_2:82448347-82448366 | None:intergenic | 30.0% | |
| !! | GATCATAAAAAGTATCGGAA+TGG | + | chr3_2:82448412-82448431 | None:intergenic | 30.0% |
| GGACATAAGTGTTATATGTT+TGG | - | chr3_2:82448459-82448478 | Msa0430570:CDS | 30.0% | |
| TCTCAATTATATCGAGAGAT+TGG | - | chr3_2:82448568-82448587 | Msa0430570:intron | 30.0% | |
| !!! | ATCAATACAGGTTTTAGAGA+TGG | - | chr3_2:82448696-82448715 | Msa0430570:intron | 30.0% |
| AAGACCCTAGATAATGATAT+GGG | - | chr3_2:82448733-82448752 | Msa0430570:intron | 30.0% | |
| CCTTAAAAAAGTCTTAACAG+TGG | + | chr3_2:82448764-82448783 | None:intergenic | 30.0% | |
| !!! | CCACTGTTAAGACTTTTTTA+AGG | - | chr3_2:82448761-82448780 | Msa0430570:intron | 30.0% |
| TATTGTAGTTTCTGTGATAC+AGG | - | chr3_2:82448870-82448889 | Msa0430570:CDS | 30.0% | |
| TTCATTGTCTATCTATGCTT+TGG | - | chr3_2:82448941-82448960 | Msa0430570:intron | 30.0% | |
| ! | TTTAAAGCCTGAAAGAAAGA+AGG | + | chr3_2:82449020-82449039 | None:intergenic | 30.0% |
| ! | TTGATGGTTCAATGCATTTA+TGG | - | chr3_2:82449257-82449276 | Msa0430570:intron | 30.0% |
| ATGATCTGTATATGTCAAGA+CGG | - | chr3_2:82449368-82449387 | Msa0430570:CDS | 30.0% | |
| !! | TTTTGGCTATTTCAATGACA+TGG | - | chr3_2:82449469-82449488 | Msa0430570:CDS | 30.0% |
| ATTGTAACAGTTCAAATACG+TGG | - | chr3_2:82449501-82449520 | Msa0430570:CDS | 30.0% | |
| ! | CACGTTTATTCATGTGATTT+TGG | + | chr3_2:82447722-82447741 | None:intergenic | 30.0% |
| ! | ATGAGATTGGTTGTTGAATT+GGG | + | chr3_2:82447762-82447781 | None:intergenic | 30.0% |
| ! | AATGAGATTGGTTGTTGAAT+TGG | + | chr3_2:82447763-82447782 | None:intergenic | 30.0% |
| TTATAAGCACTAGAAACAAC+TGG | + | chr3_2:82447852-82447871 | None:intergenic | 30.0% | |
| TTATAACTATCTTCGATCCA+TGG | - | chr3_2:82447866-82447885 | Msa0430570:CDS | 30.0% | |
| ! | TGAGAGGAATATTGATTGAT+TGG | - | chr3_2:82448056-82448075 | Msa0430570:intron | 30.0% |
| AAATTCAAATCGGACATAGA+AGG | + | chr3_2:82448230-82448249 | None:intergenic | 30.0% | |
| AAAGCATAATTCTTCGACAT+GGG | + | chr3_2:82448346-82448365 | None:intergenic | 30.0% | |
| TAAAGCATAATTCTTCGACA+TGG | + | chr3_2:82448347-82448366 | None:intergenic | 30.0% | |
| !! | GATCATAAAAAGTATCGGAA+TGG | + | chr3_2:82448412-82448431 | None:intergenic | 30.0% |
| GGACATAAGTGTTATATGTT+TGG | - | chr3_2:82448459-82448478 | Msa0430570:CDS | 30.0% | |
| TCTCAATTATATCGAGAGAT+TGG | - | chr3_2:82448568-82448587 | Msa0430570:intron | 30.0% | |
| !!! | ATCAATACAGGTTTTAGAGA+TGG | - | chr3_2:82448696-82448715 | Msa0430570:intron | 30.0% |
| AAGACCCTAGATAATGATAT+GGG | - | chr3_2:82448733-82448752 | Msa0430570:intron | 30.0% | |
| CCTTAAAAAAGTCTTAACAG+TGG | + | chr3_2:82448764-82448783 | None:intergenic | 30.0% | |
| !!! | CCACTGTTAAGACTTTTTTA+AGG | - | chr3_2:82448761-82448780 | Msa0430570:intron | 30.0% |
| TATTGTAGTTTCTGTGATAC+AGG | - | chr3_2:82448870-82448889 | Msa0430570:CDS | 30.0% | |
| TTCATTGTCTATCTATGCTT+TGG | - | chr3_2:82448941-82448960 | Msa0430570:intron | 30.0% | |
| ! | TTTAAAGCCTGAAAGAAAGA+AGG | + | chr3_2:82449020-82449039 | None:intergenic | 30.0% |
| ! | TTGATGGTTCAATGCATTTA+TGG | - | chr3_2:82449257-82449276 | Msa0430570:intron | 30.0% |
| ATGATCTGTATATGTCAAGA+CGG | - | chr3_2:82449368-82449387 | Msa0430570:CDS | 30.0% | |
| !! | TTTTGGCTATTTCAATGACA+TGG | - | chr3_2:82449469-82449488 | Msa0430570:CDS | 30.0% |
| ATTGTAACAGTTCAAATACG+TGG | - | chr3_2:82449501-82449520 | Msa0430570:CDS | 30.0% | |
| CGATTGAGAAACAATGAGAT+TGG | + | chr3_2:82447775-82447794 | None:intergenic | 35.0% | |
| !! | TGGAGCATCAAAGTTTTCAT+GGG | + | chr3_2:82447832-82447851 | None:intergenic | 35.0% |
| ATCCATGGAGGTAATCTTAT+GGG | - | chr3_2:82447881-82447900 | Msa0430570:CDS | 35.0% | |
| AAGACCAATGAAGGATTACA+TGG | - | chr3_2:82448003-82448022 | Msa0430570:intron | 35.0% | |
| ATCTCCATGTAATCCTTCAT+TGG | + | chr3_2:82448010-82448029 | None:intergenic | 35.0% | |
| GACATTGATCCAAAAATGAG+AGG | - | chr3_2:82448040-82448059 | Msa0430570:intron | 35.0% | |
| !! | TCGCTGTTTCTTACATAGAT+AGG | - | chr3_2:82448128-82448147 | Msa0430570:CDS | 35.0% |
| AAGCATAATTCTTCGACATG+GGG | + | chr3_2:82448345-82448364 | None:intergenic | 35.0% | |
| TAATACATACAACAGAGACG+AGG | - | chr3_2:82448374-82448393 | Msa0430570:intron | 35.0% | |
| TTTGGGTGCCTTAATAGTTT+GGG | - | chr3_2:82448477-82448496 | Msa0430570:CDS | 35.0% | |
| AATTCCTGCCCAAACTATTA+AGG | + | chr3_2:82448488-82448507 | None:intergenic | 35.0% | |
| TGATTCCTTGTTAGTGTGTA+TGG | - | chr3_2:82448508-82448527 | Msa0430570:CDS | 35.0% | |
| ! | GTTTTCCATACACACTAACA+AGG | + | chr3_2:82448516-82448535 | None:intergenic | 35.0% |
| CAAGACCCTAGATAATGATA+TGG | - | chr3_2:82448732-82448751 | Msa0430570:intron | 35.0% | |
| ACTGCCCATATCATTATCTA+GGG | + | chr3_2:82448740-82448759 | None:intergenic | 35.0% | |
| TCTTGCTGAGCTAAGTTTAT+TGG | - | chr3_2:82449067-82449086 | Msa0430570:CDS | 35.0% | |
| ! | TGCTTGCTAGATTCATTGTT+TGG | - | chr3_2:82449141-82449160 | Msa0430570:CDS | 35.0% |
| TATGATCAAATACTTGCCCA+GGG | + | chr3_2:82449179-82449198 | None:intergenic | 35.0% | |
| ATATGATCAAATACTTGCCC+AGG | + | chr3_2:82449180-82449199 | None:intergenic | 35.0% | |
| !! | GTATAAACCAGTTGAGTTGA+AGG | - | chr3_2:82449327-82449346 | Msa0430570:intron | 35.0% |
| TGATCTGTATATGTCAAGAC+GGG | - | chr3_2:82449369-82449388 | Msa0430570:CDS | 35.0% | |
| AACAGATCACTTGGTAAATG+AGG | + | chr3_2:82449544-82449563 | None:intergenic | 35.0% | |
| CGATTGAGAAACAATGAGAT+TGG | + | chr3_2:82447775-82447794 | None:intergenic | 35.0% | |
| !! | TGGAGCATCAAAGTTTTCAT+GGG | + | chr3_2:82447832-82447851 | None:intergenic | 35.0% |
| ATCCATGGAGGTAATCTTAT+GGG | - | chr3_2:82447881-82447900 | Msa0430570:CDS | 35.0% | |
| AAGACCAATGAAGGATTACA+TGG | - | chr3_2:82448003-82448022 | Msa0430570:intron | 35.0% | |
| ATCTCCATGTAATCCTTCAT+TGG | + | chr3_2:82448010-82448029 | None:intergenic | 35.0% | |
| GACATTGATCCAAAAATGAG+AGG | - | chr3_2:82448040-82448059 | Msa0430570:intron | 35.0% | |
| !! | TCGCTGTTTCTTACATAGAT+AGG | - | chr3_2:82448128-82448147 | Msa0430570:CDS | 35.0% |
| AAGCATAATTCTTCGACATG+GGG | + | chr3_2:82448345-82448364 | None:intergenic | 35.0% | |
| TAATACATACAACAGAGACG+AGG | - | chr3_2:82448374-82448393 | Msa0430570:intron | 35.0% | |
| TTTGGGTGCCTTAATAGTTT+GGG | - | chr3_2:82448477-82448496 | Msa0430570:CDS | 35.0% | |
| AATTCCTGCCCAAACTATTA+AGG | + | chr3_2:82448488-82448507 | None:intergenic | 35.0% | |
| TGATTCCTTGTTAGTGTGTA+TGG | - | chr3_2:82448508-82448527 | Msa0430570:CDS | 35.0% | |
| ! | GTTTTCCATACACACTAACA+AGG | + | chr3_2:82448516-82448535 | None:intergenic | 35.0% |
| CAAGACCCTAGATAATGATA+TGG | - | chr3_2:82448732-82448751 | Msa0430570:intron | 35.0% | |
| ACTGCCCATATCATTATCTA+GGG | + | chr3_2:82448740-82448759 | None:intergenic | 35.0% | |
| TCTTGCTGAGCTAAGTTTAT+TGG | - | chr3_2:82449067-82449086 | Msa0430570:CDS | 35.0% | |
| ! | TGCTTGCTAGATTCATTGTT+TGG | - | chr3_2:82449141-82449160 | Msa0430570:CDS | 35.0% |
| TATGATCAAATACTTGCCCA+GGG | + | chr3_2:82449179-82449198 | None:intergenic | 35.0% | |
| ATATGATCAAATACTTGCCC+AGG | + | chr3_2:82449180-82449199 | None:intergenic | 35.0% | |
| !! | GTATAAACCAGTTGAGTTGA+AGG | - | chr3_2:82449327-82449346 | Msa0430570:intron | 35.0% |
| TGATCTGTATATGTCAAGAC+GGG | - | chr3_2:82449369-82449388 | Msa0430570:CDS | 35.0% | |
| AACAGATCACTTGGTAAATG+AGG | + | chr3_2:82449544-82449563 | None:intergenic | 35.0% | |
| !!! | CATGTGATTTTGGGTTTCGT+TGG | + | chr3_2:82447712-82447731 | None:intergenic | 40.0% |
| CATGAATAAACGTGTCGTGT+TGG | - | chr3_2:82447728-82447747 | Msa0430570:intron | 40.0% | |
| !! | CTGGAGCATCAAAGTTTTCA+TGG | + | chr3_2:82447833-82447852 | None:intergenic | 40.0% |
| TAACTATCTTCGATCCATGG+AGG | - | chr3_2:82447869-82447888 | Msa0430570:CDS | 40.0% | |
| GATCCATGGAGGTAATCTTA+TGG | - | chr3_2:82447880-82447899 | Msa0430570:CDS | 40.0% | |
| GACAAAGAGAAGACCAATGA+AGG | - | chr3_2:82447994-82448013 | Msa0430570:intron | 40.0% | |
| GAAGCTTGACCCTATTGATA+GGG | + | chr3_2:82448168-82448187 | None:intergenic | 40.0% | |
| TGAAGCTTGACCCTATTGAT+AGG | + | chr3_2:82448169-82448188 | None:intergenic | 40.0% | |
| TAGGGTCAAGCTTCAATTGT+TGG | - | chr3_2:82448174-82448193 | Msa0430570:CDS | 40.0% | |
| AGGGTCAAGCTTCAATTGTT+GGG | - | chr3_2:82448175-82448194 | Msa0430570:CDS | 40.0% | |
| ATAATTCTTCGACATGGGGT+GGG | + | chr3_2:82448341-82448360 | None:intergenic | 40.0% | |
| GTTTGGGTGCCTTAATAGTT+TGG | - | chr3_2:82448476-82448495 | Msa0430570:CDS | 40.0% | |
| AGAGAGATCAACCCCTAAAA+AGG | - | chr3_2:82448544-82448563 | Msa0430570:intron | 40.0% | |
| GACTGCCCATATCATTATCT+AGG | + | chr3_2:82448741-82448760 | None:intergenic | 40.0% | |
| TGTAGTTTCTGTGATACAGG+AGG | - | chr3_2:82448873-82448892 | Msa0430570:CDS | 40.0% | |
| !! | GACATTTCGAAAGCGTTGTT+AGG | - | chr3_2:82448963-82448982 | Msa0430570:intron | 40.0% |
| TGTGAGATTCTTGCCTTCTT+TGG | - | chr3_2:82449100-82449119 | Msa0430570:CDS | 40.0% | |
| ! | ATACCCAGAGTATTCTTGCA+GGG | + | chr3_2:82449311-82449330 | None:intergenic | 40.0% |
| ! | TATACCCAGAGTATTCTTGC+AGG | + | chr3_2:82449312-82449331 | None:intergenic | 40.0% |
| TGTATATGTCAAGACGGGAA+GGG | - | chr3_2:82449374-82449393 | Msa0430570:CDS | 40.0% | |
| ! | AAGGGTCATTTGAAGCTACT+CGG | - | chr3_2:82449392-82449411 | Msa0430570:CDS | 40.0% |
| GGAGAAATACAAGCAGTACA+AGG | - | chr3_2:82449414-82449433 | Msa0430570:CDS | 40.0% | |
| TTGGTAAATGAGGAGGTGAA+GGG | + | chr3_2:82449534-82449553 | None:intergenic | 40.0% | |
| AGATCACTTGGTAAATGAGG+AGG | + | chr3_2:82449541-82449560 | None:intergenic | 40.0% | |
| !!! | CATGTGATTTTGGGTTTCGT+TGG | + | chr3_2:82447712-82447731 | None:intergenic | 40.0% |
| CATGAATAAACGTGTCGTGT+TGG | - | chr3_2:82447728-82447747 | Msa0430570:intron | 40.0% | |
| !! | CTGGAGCATCAAAGTTTTCA+TGG | + | chr3_2:82447833-82447852 | None:intergenic | 40.0% |
| TAACTATCTTCGATCCATGG+AGG | - | chr3_2:82447869-82447888 | Msa0430570:CDS | 40.0% | |
| GATCCATGGAGGTAATCTTA+TGG | - | chr3_2:82447880-82447899 | Msa0430570:CDS | 40.0% | |
| GACAAAGAGAAGACCAATGA+AGG | - | chr3_2:82447994-82448013 | Msa0430570:intron | 40.0% | |
| GAAGCTTGACCCTATTGATA+GGG | + | chr3_2:82448168-82448187 | None:intergenic | 40.0% | |
| TGAAGCTTGACCCTATTGAT+AGG | + | chr3_2:82448169-82448188 | None:intergenic | 40.0% | |
| TAGGGTCAAGCTTCAATTGT+TGG | - | chr3_2:82448174-82448193 | Msa0430570:CDS | 40.0% | |
| AGGGTCAAGCTTCAATTGTT+GGG | - | chr3_2:82448175-82448194 | Msa0430570:CDS | 40.0% | |
| ATAATTCTTCGACATGGGGT+GGG | + | chr3_2:82448341-82448360 | None:intergenic | 40.0% | |
| GTTTGGGTGCCTTAATAGTT+TGG | - | chr3_2:82448476-82448495 | Msa0430570:CDS | 40.0% | |
| AGAGAGATCAACCCCTAAAA+AGG | - | chr3_2:82448544-82448563 | Msa0430570:intron | 40.0% | |
| GACTGCCCATATCATTATCT+AGG | + | chr3_2:82448741-82448760 | None:intergenic | 40.0% | |
| TGTAGTTTCTGTGATACAGG+AGG | - | chr3_2:82448873-82448892 | Msa0430570:CDS | 40.0% | |
| !! | GACATTTCGAAAGCGTTGTT+AGG | - | chr3_2:82448963-82448982 | Msa0430570:intron | 40.0% |
| TGTGAGATTCTTGCCTTCTT+TGG | - | chr3_2:82449100-82449119 | Msa0430570:CDS | 40.0% | |
| ! | ATACCCAGAGTATTCTTGCA+GGG | + | chr3_2:82449311-82449330 | None:intergenic | 40.0% |
| ! | TATACCCAGAGTATTCTTGC+AGG | + | chr3_2:82449312-82449331 | None:intergenic | 40.0% |
| TGTATATGTCAAGACGGGAA+GGG | - | chr3_2:82449374-82449393 | Msa0430570:CDS | 40.0% | |
| ! | AAGGGTCATTTGAAGCTACT+CGG | - | chr3_2:82449392-82449411 | Msa0430570:CDS | 40.0% |
| GGAGAAATACAAGCAGTACA+AGG | - | chr3_2:82449414-82449433 | Msa0430570:CDS | 40.0% | |
| TTGGTAAATGAGGAGGTGAA+GGG | + | chr3_2:82449534-82449553 | None:intergenic | 40.0% | |
| AGATCACTTGGTAAATGAGG+AGG | + | chr3_2:82449541-82449560 | None:intergenic | 40.0% | |
| GACCCATAAGATTACCTCCA+TGG | + | chr3_2:82447886-82447905 | None:intergenic | 45.0% | |
| GGCTTACGATGCAATGTACA+TGG | + | chr3_2:82448209-82448228 | None:intergenic | 45.0% | |
| CATAATTCTTCGACATGGGG+TGG | + | chr3_2:82448342-82448361 | None:intergenic | 45.0% | |
| TTGGTCTCAGTAGTTGCGTT+TGG | - | chr3_2:82448587-82448606 | Msa0430570:intron | 45.0% | |
| TGGTCTCAGTAGTTGCGTTT+GGG | - | chr3_2:82448588-82448607 | Msa0430570:intron | 45.0% | |
| GAGATTCTTGCCTTCTTTGG+TGG | - | chr3_2:82449103-82449122 | Msa0430570:CDS | 45.0% | |
| TTTGGCCCAAAACTTATCCC+TGG | - | chr3_2:82449159-82449178 | Msa0430570:CDS | 45.0% | |
| TTGGCCCAAAACTTATCCCT+GGG | - | chr3_2:82449160-82449179 | Msa0430570:CDS | 45.0% | |
| ! | CTTGCCCAGGGATAAGTTTT+GGG | + | chr3_2:82449167-82449186 | None:intergenic | 45.0% |
| ! | ACTTGCCCAGGGATAAGTTT+TGG | + | chr3_2:82449168-82449187 | None:intergenic | 45.0% |
| ACGCATTCCTTCAACTCAAC+TGG | + | chr3_2:82449337-82449356 | None:intergenic | 45.0% | |
| CTGTATATGTCAAGACGGGA+AGG | - | chr3_2:82449373-82449392 | Msa0430570:CDS | 45.0% | |
| ! | AGGGTCATTTGAAGCTACTC+GGG | - | chr3_2:82449393-82449412 | Msa0430570:CDS | 45.0% |
| CTTGGTAAATGAGGAGGTGA+AGG | + | chr3_2:82449535-82449554 | None:intergenic | 45.0% | |
| GACCCATAAGATTACCTCCA+TGG | + | chr3_2:82447886-82447905 | None:intergenic | 45.0% | |
| GGCTTACGATGCAATGTACA+TGG | + | chr3_2:82448209-82448228 | None:intergenic | 45.0% | |
| CATAATTCTTCGACATGGGG+TGG | + | chr3_2:82448342-82448361 | None:intergenic | 45.0% | |
| TTGGTCTCAGTAGTTGCGTT+TGG | - | chr3_2:82448587-82448606 | Msa0430570:intron | 45.0% | |
| TGGTCTCAGTAGTTGCGTTT+GGG | - | chr3_2:82448588-82448607 | Msa0430570:intron | 45.0% | |
| GAGATTCTTGCCTTCTTTGG+TGG | - | chr3_2:82449103-82449122 | Msa0430570:CDS | 45.0% | |
| TTTGGCCCAAAACTTATCCC+TGG | - | chr3_2:82449159-82449178 | Msa0430570:CDS | 45.0% | |
| TTGGCCCAAAACTTATCCCT+GGG | - | chr3_2:82449160-82449179 | Msa0430570:CDS | 45.0% | |
| ! | CTTGCCCAGGGATAAGTTTT+GGG | + | chr3_2:82449167-82449186 | None:intergenic | 45.0% |
| ! | ACTTGCCCAGGGATAAGTTT+TGG | + | chr3_2:82449168-82449187 | None:intergenic | 45.0% |
| ACGCATTCCTTCAACTCAAC+TGG | + | chr3_2:82449337-82449356 | None:intergenic | 45.0% | |
| CTGTATATGTCAAGACGGGA+AGG | - | chr3_2:82449373-82449392 | Msa0430570:CDS | 45.0% | |
| ! | AGGGTCATTTGAAGCTACTC+GGG | - | chr3_2:82449393-82449412 | Msa0430570:CDS | 45.0% |
| CTTGGTAAATGAGGAGGTGA+AGG | + | chr3_2:82449535-82449554 | None:intergenic | 45.0% | |
| TTGAGACTCGCTCTGCAAAG+AGG | - | chr3_2:82447682-82447701 | Msa0430570:CDS | 50.0% | |
| GGTGCCTTAATAGTTTGGGC+AGG | - | chr3_2:82448481-82448500 | Msa0430570:CDS | 50.0% | |
| GGTCTCAGTAGTTGCGTTTG+GGG | - | chr3_2:82448589-82448608 | Msa0430570:intron | 50.0% | |
| TCAGCCCTGCAAGAATACTC+TGG | - | chr3_2:82449304-82449323 | Msa0430570:intron | 50.0% | |
| CAGCCCTGCAAGAATACTCT+GGG | - | chr3_2:82449305-82449324 | Msa0430570:intron | 50.0% | |
| GTAAATGAGGAGGTGAAGGG+AGG | + | chr3_2:82449531-82449550 | None:intergenic | 50.0% | |
| TTGAGACTCGCTCTGCAAAG+AGG | - | chr3_2:82447682-82447701 | Msa0430570:CDS | 50.0% | |
| GGTGCCTTAATAGTTTGGGC+AGG | - | chr3_2:82448481-82448500 | Msa0430570:CDS | 50.0% | |
| GGTCTCAGTAGTTGCGTTTG+GGG | - | chr3_2:82448589-82448608 | Msa0430570:intron | 50.0% | |
| TCAGCCCTGCAAGAATACTC+TGG | - | chr3_2:82449304-82449323 | Msa0430570:intron | 50.0% | |
| CAGCCCTGCAAGAATACTCT+GGG | - | chr3_2:82449305-82449324 | Msa0430570:intron | 50.0% | |
| GTAAATGAGGAGGTGAAGGG+AGG | + | chr3_2:82449531-82449550 | None:intergenic | 50.0% | |
| ATCGACGCAGCCACCAAAGA+AGG | + | chr3_2:82449116-82449135 | None:intergenic | 55.0% | |
| ATCGACGCAGCCACCAAAGA+AGG | + | chr3_2:82449116-82449135 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 82447678 | 82449567 | 82447678 | ID=Msa0430570;Name=Msa0430570 |
| chr3_2 | mRNA | 82447678 | 82449567 | 82447678 | ID=Msa0430570-mRNA-1;Parent=Msa0430570;Name=Msa0430570-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|7|0|311 |
| chr3_2 | exon | 82449355 | 82449567 | 82449355 | ID=Msa0430570-mRNA-1:exon:22890;Parent=Msa0430570-mRNA-1 |
| chr3_2 | exon | 82449024 | 82449256 | 82449024 | ID=Msa0430570-mRNA-1:exon:22889;Parent=Msa0430570-mRNA-1 |
| chr3_2 | exon | 82448850 | 82448925 | 82448850 | ID=Msa0430570-mRNA-1:exon:22888;Parent=Msa0430570-mRNA-1 |
| chr3_2 | exon | 82448444 | 82448539 | 82448444 | ID=Msa0430570-mRNA-1:exon:22887;Parent=Msa0430570-mRNA-1 |
| chr3_2 | exon | 82448088 | 82448213 | 82448088 | ID=Msa0430570-mRNA-1:exon:22886;Parent=Msa0430570-mRNA-1 |
| chr3_2 | exon | 82447810 | 82447944 | 82447810 | ID=Msa0430570-mRNA-1:exon:22885;Parent=Msa0430570-mRNA-1 |
| chr3_2 | exon | 82447678 | 82447734 | 82447678 | ID=Msa0430570-mRNA-1:exon:22884;Parent=Msa0430570-mRNA-1 |
| chr3_2 | CDS | 82449355 | 82449567 | 82449355 | ID=Msa0430570-mRNA-1:cds;Parent=Msa0430570-mRNA-1 |
| chr3_2 | CDS | 82449024 | 82449256 | 82449024 | ID=Msa0430570-mRNA-1:cds;Parent=Msa0430570-mRNA-1 |
| chr3_2 | CDS | 82448850 | 82448925 | 82448850 | ID=Msa0430570-mRNA-1:cds;Parent=Msa0430570-mRNA-1 |
| chr3_2 | CDS | 82448444 | 82448539 | 82448444 | ID=Msa0430570-mRNA-1:cds;Parent=Msa0430570-mRNA-1 |
| chr3_2 | CDS | 82448088 | 82448213 | 82448088 | ID=Msa0430570-mRNA-1:cds;Parent=Msa0430570-mRNA-1 |
| chr3_2 | CDS | 82447810 | 82447944 | 82447810 | ID=Msa0430570-mRNA-1:cds;Parent=Msa0430570-mRNA-1 |
| chr3_2 | CDS | 82447678 | 82447734 | 82447678 | ID=Msa0430570-mRNA-1:cds;Parent=Msa0430570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
