Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0431290 | GAU44978.1 | 81.658 | 796 | 94 | 7 | 1 | 789 | 1 | 751 | 0.0 | 1257 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0431290 | sp|F4JRR1|COG2_ARATH | 60.281 | 783 | 257 | 9 | 13 | 788 | 19 | 754 | 0.0 | 919 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0431290 | A0A2Z6NKF6 | 81.658 | 796 | 94 | 7 | 1 | 789 | 1 | 751 | 0.0 | 1257 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0431290 | Msa0476580 | 0.846092 | 2.698706e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0431290 | MtrunA17_Chr4g0057621 | 81.486 | 794 | 99 | 5 | 1 | 788 | 1 | 752 | 0.0 | 1248 |
| Msa0431290 | MtrunA17_Chr3g0136251 | 72.340 | 188 | 12 | 2 | 202 | 389 | 24 | 171 | 2.38e-82 | 261 |
| Msa0431290 | MtrunA17_Chr3g0136241 | 90.278 | 144 | 14 | 0 | 585 | 728 | 1 | 144 | 4.66e-82 | 258 |
| Msa0431290 | MtrunA17_Chr3g0136261 | 95.181 | 83 | 4 | 0 | 1 | 83 | 1 | 83 | 4.82e-49 | 167 |
| Msa0431290 | MtrunA17_Chr3g0136231 | 89.130 | 46 | 5 | 0 | 744 | 789 | 1 | 46 | 4.17e-20 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0431290 | AT4G24840.1 | 60.281 | 783 | 257 | 9 | 13 | 788 | 19 | 754 | 0.0 | 919 |
Find 190 sgRNAs with CRISPR-Local
Find 582 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAATGAGTTGGTGATTT+AGG | 0.076058 | 3_2:-83349761 | None:intergenic |
| ATCGATATCACATACCTTTA+AGG | 0.095937 | 3_2:-83354267 | None:intergenic |
| CGTCAATTGCCTTAGGTTTC+AGG | 0.127249 | 3_2:+83353124 | Msa0431290:intron |
| TCTCCTTGCAGCTTCTTTCT+AGG | 0.188026 | 3_2:+83353333 | Msa0431290:CDS |
| CAAATCAAGCTTGGAGTTCT+TGG | 0.214006 | 3_2:+83352720 | Msa0431290:CDS |
| ATAATAAGAGTTTGCATCTA+TGG | 0.216112 | 3_2:+83357633 | Msa0431290:exon |
| TGGAGTATTACGTCCCTTAA+AGG | 0.243370 | 3_2:+83354253 | Msa0431290:CDS |
| GCAGCTGTTCCTTGATATTC+AGG | 0.252906 | 3_2:+83357381 | Msa0431290:CDS |
| TAGCTTTGACTGTAGTTGTT+AGG | 0.255960 | 3_2:+83351401 | Msa0431290:CDS |
| TTCAAGAACTCTGGTCTTCC+AGG | 0.261973 | 3_2:-83352691 | None:intergenic |
| TGCTTCAAACCATTCTTAAT+AGG | 0.274030 | 3_2:-83349930 | None:intergenic |
| CTTACTGATTCAAGGACATT+AGG | 0.281694 | 3_2:-83353892 | None:intergenic |
| AAATAGTTATCAATTAATTA+AGG | 0.283591 | 3_2:+83352249 | Msa0431290:CDS |
| TGGGGAGAAAATCTCATATT+TGG | 0.291174 | 3_2:+83357076 | Msa0431290:CDS |
| TTTACACGTCTTTGACTTCT+TGG | 0.292008 | 3_2:+83352606 | Msa0431290:CDS |
| TTCTCCATATTCTCAATAAA+AGG | 0.292427 | 3_2:-83351986 | None:intergenic |
| GAACTTACAGATACTCAAAT+TGG | 0.296371 | 3_2:+83353427 | Msa0431290:intron |
| TTTGTGTATTATAGATTTCA+TGG | 0.296490 | 3_2:-83357719 | None:intergenic |
| GGGAACGAAGGTTGGGAGTT+GGG | 0.310636 | 3_2:-83349697 | None:intergenic |
| TTGCATCCTATGGTTCATTA+TGG | 0.310668 | 3_2:+83357572 | Msa0431290:CDS |
| ATGAATGAGTTGGTGATTTA+GGG | 0.319099 | 3_2:-83349760 | None:intergenic |
| ACATATGGTGATTGCCTAAC+AGG | 0.320806 | 3_2:-83354227 | None:intergenic |
| GAGAATGATCGAAACCGTTT+TGG | 0.323878 | 3_2:-83349528 | None:intergenic |
| GCATTTGGTGCAGAAAATTC+AGG | 0.330790 | 3_2:+83352583 | Msa0431290:intron |
| CCAAGCTTGCATCTACTAAT+AGG | 0.332448 | 3_2:-83352027 | None:intergenic |
| TTAGGGGAGAGGAAGGGTTC+GGG | 0.334672 | 3_2:-83349651 | None:intergenic |
| ACTGTAGTTGTTAGGGTCAA+TGG | 0.344266 | 3_2:+83351409 | Msa0431290:CDS |
| TCATCATCAGCTGCGGCTGC+TGG | 0.345549 | 3_2:+83352205 | Msa0431290:CDS |
| TATTCATGATATAAGATGTT+TGG | 0.353453 | 3_2:+83353810 | Msa0431290:CDS |
| TCGATATCACATACCTTTAA+GGG | 0.363255 | 3_2:-83354266 | None:intergenic |
| TATGATTCGGAATCGAAGTT+AGG | 0.364116 | 3_2:-83349669 | None:intergenic |
| GAGTTCTTGGCTTATCTAGA+AGG | 0.365781 | 3_2:+83352733 | Msa0431290:CDS |
| GACATAATTTCTAACAATAA+TGG | 0.371733 | 3_2:+83349563 | Msa0431290:exon |
| TTACTGATTCAAGGACATTA+GGG | 0.375922 | 3_2:-83353891 | None:intergenic |
| GTTAGAAATTATGTCGAGAT+TGG | 0.379816 | 3_2:-83349555 | None:intergenic |
| CAAAGCAGTGGTGGAGTCTC+TGG | 0.381245 | 3_2:+83353969 | Msa0431290:CDS |
| TGAACACAGACAGTAGATTA+AGG | 0.388033 | 3_2:-83351363 | None:intergenic |
| GTTAGGGGAGAGGAAGGGTT+CGG | 0.389283 | 3_2:-83349652 | None:intergenic |
| AGACGAGCAGGGGCAAGTTC+AGG | 0.389736 | 3_2:+83357316 | Msa0431290:CDS |
| TCTATAATACACAAATTAGT+TGG | 0.397224 | 3_2:+83357727 | Msa0431290:three_prime_UTR |
| AGTTCATGAAGCAATGGAAT+TGG | 0.400219 | 3_2:+83353004 | Msa0431290:CDS |
| AAATTTAGCAACAGCAGATC+TGG | 0.402378 | 3_2:-83352959 | None:intergenic |
| GCACCGGCACTGGGCGTGGA+TGG | 0.410025 | 3_2:+83353490 | Msa0431290:CDS |
| AGCTTTGACTGTAGTTGTTA+GGG | 0.410934 | 3_2:+83351402 | Msa0431290:CDS |
| TAAAGGTTCAAAGGATTTCA+AGG | 0.412758 | 3_2:-83353941 | None:intergenic |
| TGCTCTGCCTTACTGATTCA+AGG | 0.414153 | 3_2:-83353900 | None:intergenic |
| ACCTCTTCTCCGACCCTCTC+TGG | 0.414416 | 3_2:+83349622 | Msa0431290:CDS |
| AGAAAAGTTCGTTGAGCAAT+GGG | 0.415511 | 3_2:+83350857 | Msa0431290:CDS |
| TTGGGACATTGCTTTGTAGA+TGG | 0.416385 | 3_2:+83352046 | Msa0431290:CDS |
| GTGTGGAGGGGAACGAAGGT+TGG | 0.416819 | 3_2:-83349705 | None:intergenic |
| CTAATAAGCCTCTACCTGTT+AGG | 0.417673 | 3_2:+83354213 | Msa0431290:CDS |
| TAGCAAAGAGAACCTCTCTA+AGG | 0.419095 | 3_2:-83352639 | None:intergenic |
| ATTGTGTTCTGCTTATCTGC+TGG | 0.421008 | 3_2:-83357607 | None:intergenic |
| TTATTGGATATTTCTTCAGC+TGG | 0.426378 | 3_2:+83352298 | Msa0431290:CDS |
| CCCTAGCGCAGAGAGATTAC+AGG | 0.427469 | 3_2:-83357533 | None:intergenic |
| GCTGCTGGATCATCTGAGGA+TGG | 0.430629 | 3_2:+83352220 | Msa0431290:CDS |
| TGTGGAGGGGAACGAAGGTT+GGG | 0.433496 | 3_2:-83349704 | None:intergenic |
| ACAAGCACCGGCACTGGGCG+TGG | 0.439906 | 3_2:+83353486 | Msa0431290:CDS |
| GCAGGTGGAGAAACTAATAA+AGG | 0.442254 | 3_2:+83350783 | Msa0431290:intron |
| GGGGAACGAAGGTTGGGAGT+TGG | 0.446452 | 3_2:-83349698 | None:intergenic |
| GGGATAATCTTCTGCATCAA+TGG | 0.451323 | 3_2:-83352175 | None:intergenic |
| TTACTTACAACACGTGGTTC+AGG | 0.453410 | 3_2:+83353852 | Msa0431290:CDS |
| TCTCTCTGCGCTAGGGGTTG+AGG | 0.454562 | 3_2:+83357540 | Msa0431290:CDS |
| CTACTGTCTGTGTTCACTGT+TGG | 0.457386 | 3_2:+83351370 | Msa0431290:CDS |
| GAATTGCCAGTGAGATGAAC+CGG | 0.462260 | 3_2:+83350944 | Msa0431290:CDS |
| CTTAGGTTTCAGGAAATAGC+AGG | 0.463103 | 3_2:+83353134 | Msa0431290:intron |
| AACCTCTCTAAGGATTGAAT+TGG | 0.466396 | 3_2:-83352629 | None:intergenic |
| ATGATTCGGAATCGAAGTTA+GGG | 0.466454 | 3_2:-83349668 | None:intergenic |
| CCCGTTCAAAATTTAGATCC+TGG | 0.468135 | 3_2:+83353194 | Msa0431290:CDS |
| AAACCTAGTTCAATGTAGAC+TGG | 0.470116 | 3_2:-83349472 | None:intergenic |
| TGCTTCCGCTAGAGAGACTT+TGG | 0.471083 | 3_2:+83349965 | Msa0431290:CDS |
| GCCTGTAATCTCTCTGCGCT+AGG | 0.471729 | 3_2:+83357532 | Msa0431290:CDS |
| ACCACTGCTTTGATGACTAA+AGG | 0.473079 | 3_2:-83353958 | None:intergenic |
| TTCGTTTCATCTTGTTTCCA+AGG | 0.475250 | 3_2:+83350001 | Msa0431290:CDS |
| AGAGACTCAAAGCATGCTGC+TGG | 0.477659 | 3_2:+83350918 | Msa0431290:CDS |
| CCTATTAGTAGATGCAAGCT+TGG | 0.478333 | 3_2:+83352027 | Msa0431290:CDS |
| TCTCTCTCAGCTCGACAAGC+GGG | 0.478607 | 3_2:-83349866 | None:intergenic |
| ATCCCATCCACGCCCAGTGC+CGG | 0.479639 | 3_2:-83353493 | None:intergenic |
| TCTTGATAATTTGCTTCGCC+AGG | 0.482279 | 3_2:-83353212 | None:intergenic |
| ATAGACTCCGACTGGTCAAA+TGG | 0.486421 | 3_2:+83350817 | Msa0431290:CDS |
| AGGCAATCACCATATGTTGC+TGG | 0.491749 | 3_2:+83354233 | Msa0431290:CDS |
| GCAGTCAATATTGCATCCTA+TGG | 0.492855 | 3_2:+83357562 | Msa0431290:CDS |
| CCTGTAATCTCTCTGCGCTA+GGG | 0.493651 | 3_2:+83357533 | Msa0431290:CDS |
| CATAACACAAGCACCGGCAC+TGG | 0.493980 | 3_2:+83353480 | Msa0431290:CDS |
| CACCGGCACTGGGCGTGGAT+GGG | 0.495300 | 3_2:+83353491 | Msa0431290:CDS |
| TTTGATGACTAAAGGTTCAA+AGG | 0.495401 | 3_2:-83353950 | None:intergenic |
| TTGTAGATGGTCTAAAACAC+CGG | 0.495701 | 3_2:+83352059 | Msa0431290:CDS |
| ACTGTGCAACATGTCGAGAA+TGG | 0.496287 | 3_2:+83350883 | Msa0431290:CDS |
| CACTCCCTCAACATCCAAAA+CGG | 0.500946 | 3_2:+83349514 | Msa0431290:five_prime_UTR |
| CTGTGCAACATGTCGAGAAT+GGG | 0.501153 | 3_2:+83350884 | Msa0431290:CDS |
| AAAACAAAGTGTAACTCTGT+TGG | 0.501400 | 3_2:+83353244 | Msa0431290:CDS |
| CGTAATACTCCAGCAACATA+TGG | 0.505695 | 3_2:-83354242 | None:intergenic |
| ATTCTATGTTACACATGCAA+AGG | 0.505855 | 3_2:+83350972 | Msa0431290:CDS |
| TGGAGAGTTTGAGATTGTGC+TGG | 0.507140 | 3_2:+83353264 | Msa0431290:CDS |
| CAGAGTTCACAGAGACGAGC+AGG | 0.510853 | 3_2:+83357304 | Msa0431290:CDS |
| TCATGATATAAGATGTTTGG+AGG | 0.514413 | 3_2:+83353813 | Msa0431290:CDS |
| TTCCCAGTCTACATTGAACT+AGG | 0.515411 | 3_2:+83349469 | None:intergenic |
| CTGCTGGATCATCTGAGGAT+GGG | 0.515950 | 3_2:+83352221 | Msa0431290:CDS |
| GAGTTGGGAGATGTATGATT+CGG | 0.518789 | 3_2:-83349682 | None:intergenic |
| CCAGGACTTGAGACAGATGA+AGG | 0.520985 | 3_2:+83354166 | Msa0431290:intron |
| ATCGAAGTTAGGGGAGAGGA+AGG | 0.523013 | 3_2:-83349658 | None:intergenic |
| GGTCTGTGATGCGCTAGAAT+AGG | 0.523549 | 3_2:-83349591 | None:intergenic |
| GTTGGTGATTTAGGGATGAA+AGG | 0.523643 | 3_2:-83349752 | None:intergenic |
| GGTTCTCTTTGCTATTCAGA+AGG | 0.526000 | 3_2:+83352648 | Msa0431290:CDS |
| GGAATTTGTCGGAACAAGAA+AGG | 0.527333 | 3_2:-83353304 | None:intergenic |
| TGGACTGCGAAAGTCTAGAA+AGG | 0.531517 | 3_2:+83351429 | Msa0431290:CDS |
| CCATATTCTCAATAAAAGGC+AGG | 0.533344 | 3_2:-83351982 | None:intergenic |
| ACCAGAGAGGGTCGGAGAAG+AGG | 0.533965 | 3_2:-83349623 | None:intergenic |
| GTCGAGAATGGGACAAGTCT+CGG | 0.536569 | 3_2:+83350895 | Msa0431290:CDS |
| TGTAAATTGCAGTTGCATCC+CGG | 0.537246 | 3_2:-83352078 | None:intergenic |
| GGAGAGGCGAAGGAATTTGT+CGG | 0.538155 | 3_2:-83353315 | None:intergenic |
| CTAATGTCCTTGAATCAGTA+AGG | 0.539249 | 3_2:+83353893 | Msa0431290:CDS |
| GAGAAAAGTTCGTTGAGCAA+TGG | 0.540915 | 3_2:+83350856 | Msa0431290:CDS |
| CTATTAGTAGATGCAAGCTT+GGG | 0.542829 | 3_2:+83352028 | Msa0431290:CDS |
| ATCAACATCAACAATGTTAG+CGG | 0.546955 | 3_2:-83349820 | None:intergenic |
| ATTCCATTGCTTCATGAACT+CGG | 0.547173 | 3_2:-83353001 | None:intergenic |
| AAATGGAGATGTGAATTTGT+CGG | 0.550788 | 3_2:+83350834 | Msa0431290:CDS |
| CACATCTCCATTTGACCAGT+CGG | 0.552640 | 3_2:-83350824 | None:intergenic |
| GAAGCTGCAAGGAGAGGCGA+AGG | 0.554994 | 3_2:-83353325 | None:intergenic |
| CTTCCAGGAGAAAATGCACC+TGG | 0.557252 | 3_2:-83352676 | None:intergenic |
| CGGAATCGAAGTTAGGGGAG+AGG | 0.558059 | 3_2:-83349662 | None:intergenic |
| GTTCTCTTTGCTATTCAGAA+GGG | 0.558787 | 3_2:+83352649 | Msa0431290:CDS |
| TTGGTTACGAGTAGTCAAGA+AGG | 0.561008 | 3_2:+83357254 | Msa0431290:intron |
| AACCTAGTTCAATGTAGACT+GGG | 0.565317 | 3_2:-83349471 | None:intergenic |
| AGGTTGATTGCTTTCTTGTG+TGG | 0.565689 | 3_2:+83357672 | Msa0431290:three_prime_UTR |
| TTATTGAGAATATGGAGAAG+AGG | 0.569360 | 3_2:+83351990 | Msa0431290:CDS |
| GGACTGCGAAAGTCTAGAAA+GGG | 0.569836 | 3_2:+83351430 | Msa0431290:CDS |
| GGCCAATTCAATCCTTAGAG+AGG | 0.570620 | 3_2:+83352627 | Msa0431290:CDS |
| TGAGTTGTGAACGGAGAGTG+TGG | 0.573335 | 3_2:-83349722 | None:intergenic |
| GACCAGTCGGAGTCTATACT+AGG | 0.574201 | 3_2:-83350811 | None:intergenic |
| GGTGATTGCCTAACAGGTAG+AGG | 0.576101 | 3_2:-83354221 | None:intergenic |
| TTGTGAACGGAGAGTGTGGA+GGG | 0.576787 | 3_2:-83349718 | None:intergenic |
| ATAACACAAGCACCGGCACT+GGG | 0.577289 | 3_2:+83353481 | Msa0431290:CDS |
| TCATGCCTACCTGAATATCA+AGG | 0.583005 | 3_2:-83357390 | None:intergenic |
| CAGGACTTGAGACAGATGAA+GGG | 0.586371 | 3_2:+83354167 | Msa0431290:intron |
| TATACTTAACCAGTCGCTGA+AGG | 0.587793 | 3_2:+83351339 | Msa0431290:intron |
| GTCGGAGAAGAGGTTCGTGG+TGG | 0.589026 | 3_2:-83349613 | None:intergenic |
| TTCTCTCTCAGCTCGACAAG+CGG | 0.593386 | 3_2:-83349867 | None:intergenic |
| TGCCTAGTATAGACTCCGAC+TGG | 0.595569 | 3_2:+83350809 | Msa0431290:CDS |
| TCGGAGAAGAGGTTCGTGGT+GGG | 0.596064 | 3_2:-83349612 | None:intergenic |
| ACACTGCCATAATGAACCAT+AGG | 0.598998 | 3_2:-83357578 | None:intergenic |
| AGCTGCCGACTTTGTTACTG+TGG | 0.599051 | 3_2:+83357166 | Msa0431290:CDS |
| AAGAGTCATAACACAAGCAC+CGG | 0.599229 | 3_2:+83353474 | Msa0431290:CDS |
| GCTATTCAGAAGGGAAAACC+AGG | 0.602778 | 3_2:+83352658 | Msa0431290:CDS |
| ACCTTTAGTCATCAAAGCAG+TGG | 0.602878 | 3_2:+83353957 | Msa0431290:CDS |
| CTGTAATCTCTCTGCGCTAG+GGG | 0.606581 | 3_2:+83357534 | Msa0431290:CDS |
| TGCGGCTGCTGGATCATCTG+AGG | 0.607010 | 3_2:+83352216 | Msa0431290:CDS |
| GGTAGTTGTTGAGTTGTGAA+CGG | 0.611307 | 3_2:-83349731 | None:intergenic |
| ATACCGAGTTCATGAAGCAA+TGG | 0.612967 | 3_2:+83352998 | Msa0431290:CDS |
| GATGTTTCAGATGTCATAGA+TGG | 0.615823 | 3_2:+83353513 | Msa0431290:CDS |
| ATGGAGTAGATGCGGCATGT+AGG | 0.616473 | 3_2:+83357652 | Msa0431290:three_prime_UTR |
| ACATGGGTCATCATCAGCTG+CGG | 0.618549 | 3_2:+83352198 | Msa0431290:CDS |
| CTCTCTCAGCTCGACAAGCG+GGG | 0.618939 | 3_2:-83349865 | None:intergenic |
| TAGAAAGAAGCTGCAAGGAG+AGG | 0.618992 | 3_2:-83353331 | None:intergenic |
| AGAGTTCACAGAGACGAGCA+GGG | 0.619770 | 3_2:+83357305 | Msa0431290:CDS |
| CAGCTGCATATGCATTCTGT+CGG | 0.619780 | 3_2:-83357365 | None:intergenic |
| AGGGTCGGAGAAGAGGTTCG+TGG | 0.623171 | 3_2:-83349616 | None:intergenic |
| GGGTTTGAACCAGAGAGGGT+CGG | 0.628996 | 3_2:-83349631 | None:intergenic |
| ATGCAGAAGATTATCCCACA+TGG | 0.629081 | 3_2:+83352181 | Msa0431290:CDS |
| TACTGATTCAAGGACATTAG+GGG | 0.630300 | 3_2:-83353890 | None:intergenic |
| TGTCATCTGTACTGACTGCA+TGG | 0.631708 | 3_2:+83353451 | Msa0431290:CDS |
| GAGTTCACAGAGACGAGCAG+GGG | 0.634656 | 3_2:+83357306 | Msa0431290:CDS |
| AGCAGTGGTGGAGTCTCTGG+TGG | 0.638337 | 3_2:+83353972 | Msa0431290:CDS |
| AGGACTTGAGACAGATGAAG+GGG | 0.638861 | 3_2:+83354168 | Msa0431290:intron |
| TGTAGATGGTCTAAAACACC+GGG | 0.640649 | 3_2:+83352060 | Msa0431290:CDS |
| TGTTTGGAGGATCATGTTCG+TGG | 0.641392 | 3_2:+83353826 | Msa0431290:CDS |
| GTTCGGGTTTGAACCAGAGA+GGG | 0.644202 | 3_2:-83349635 | None:intergenic |
| TGACCTAGAAAGAAGCTGCA+AGG | 0.644476 | 3_2:-83353336 | None:intergenic |
| TTAGGTTTCAGGAAATAGCA+GGG | 0.645940 | 3_2:+83353135 | Msa0431290:intron |
| TAATCTCAGTTGCAGCACAA+AGG | 0.648567 | 3_2:-83357124 | None:intergenic |
| TGGTTCATTATGGCAGTGTG+TGG | 0.649208 | 3_2:+83357582 | Msa0431290:CDS |
| TGGTGATTACTTACAACACG+TGG | 0.655831 | 3_2:+83353846 | Msa0431290:CDS |
| ATAATTTCTAACAATAATGG+CGG | 0.658953 | 3_2:+83349566 | Msa0431290:exon |
| TTTAGTCATCAAAGCAGTGG+TGG | 0.660509 | 3_2:+83353960 | Msa0431290:CDS |
| GTTGTGAACGGAGAGTGTGG+AGG | 0.662447 | 3_2:-83349719 | None:intergenic |
| GAGAGTGTGGAGGGGAACGA+AGG | 0.663162 | 3_2:-83349709 | None:intergenic |
| GATTGATAAGATGAATGAGT+TGG | 0.664025 | 3_2:-83349770 | None:intergenic |
| TGTGAACGGAGAGTGTGGAG+GGG | 0.664267 | 3_2:-83349717 | None:intergenic |
| TTGCATCTATGGAGTAGATG+CGG | 0.670743 | 3_2:+83357644 | Msa0431290:three_prime_UTR |
| TCGAAGTTAGGGGAGAGGAA+GGG | 0.673297 | 3_2:-83349657 | None:intergenic |
| TGCAGAAGATTATCCCACAT+GGG | 0.676518 | 3_2:+83352182 | Msa0431290:CDS |
| TCTTACCACAGTAACAAAGT+CGG | 0.678088 | 3_2:-83357171 | None:intergenic |
| GGTTCGGGTTTGAACCAGAG+AGG | 0.679460 | 3_2:-83349636 | None:intergenic |
| AAGCTCCAAAGTCTCTCTAG+CGG | 0.680122 | 3_2:-83349970 | None:intergenic |
| TTAGCAACAGCAGATCTGGA+CGG | 0.689389 | 3_2:-83352955 | None:intergenic |
| TGATTCGGAATCGAAGTTAG+GGG | 0.691586 | 3_2:-83349667 | None:intergenic |
| CAGCTGATGATGACCCATGT+GGG | 0.694446 | 3_2:-83352195 | None:intergenic |
| GAAAAGTTCGTTGAGCAATG+GGG | 0.695654 | 3_2:+83350858 | Msa0431290:CDS |
| TGTTGATGTTGATGACGCTG+TGG | 0.698993 | 3_2:+83349830 | Msa0431290:CDS |
| GCAGCTGATGATGACCCATG+TGG | 0.752023 | 3_2:-83352196 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATTATAATAAATAAAA+AGG | + | chr3_2:83351709-83351728 | Msa0431290:intron | 0.0% |
| !! | TTTATTATAATAAATAAAAA+GGG | + | chr3_2:83351710-83351729 | Msa0431290:intron | 0.0% |
| !!! | TATTTGTTTTCTTTTTTTTT+TGG | + | chr3_2:83350451-83350470 | Msa0431290:intron | 10.0% |
| !!! | AACAAATTTTATAAATTAGT+TGG | + | chr3_2:83351059-83351078 | Msa0431290:intron | 10.0% |
| !! | TTTATTCAATAAATAATCAA+AGG | - | chr3_2:83351506-83351525 | None:intergenic | 10.0% |
| !! | AAATAGTTATCAATTAATTA+AGG | + | chr3_2:83352249-83352268 | Msa0431290:CDS | 10.0% |
| !! | ATAATTTATTACTAATATAG+GGG | - | chr3_2:83354541-83354560 | None:intergenic | 10.0% |
| !!! | AACTTTTTTTTTTATTAAGA+TGG | + | chr3_2:83355056-83355075 | Msa0431290:intron | 10.0% |
| !! | TGTTAATAAATTATTTGATT+GGG | - | chr3_2:83355135-83355154 | None:intergenic | 10.0% |
| !! | TTGTTAATAAATTATTTGAT+TGG | - | chr3_2:83355136-83355155 | None:intergenic | 10.0% |
| !! | TGTTAATAAATTATTTGATT+GGG | - | chr3_2:83355135-83355154 | None:intergenic | 10.0% |
| !! | TTGTTAATAAATTATTTGAT+TGG | - | chr3_2:83355136-83355155 | None:intergenic | 10.0% |
| !! | AAATTATTTATTGAATAACA+AGG | + | chr3_2:83356180-83356199 | Msa0431290:intron | 10.0% |
| !! | AATTATTTATTGAATAACAA+GGG | + | chr3_2:83356181-83356200 | Msa0431290:intron | 10.0% |
| !!! | TAATTTTTCTCTTTAAAAAA+AGG | + | chr3_2:83356264-83356283 | Msa0431290:intron | 10.0% |
| !!! | AATAGTTTTTTTTTTTTTGA+AGG | + | chr3_2:83357777-83357796 | Msa0431290:intron | 10.0% |
| !! | GATTATTTATTGAATAAACT+TGG | + | chr3_2:83351508-83351527 | Msa0431290:intron | 15.0% |
| !! | CTTTAGATATGTAAATATAA+TGG | - | chr3_2:83352559-83352578 | None:intergenic | 15.0% |
| !!! | ATATTTACATATCTAAAGTT+TGG | + | chr3_2:83352561-83352580 | Msa0431290:intron | 15.0% |
| !!! | AGAAAATTGTTATTTTATCA+TGG | - | chr3_2:83353710-83353729 | None:intergenic | 15.0% |
| !! | ACAATGTTTATTCATTAAAT+TGG | + | chr3_2:83354023-83354042 | Msa0431290:intron | 15.0% |
| !! | TAATTTATTACTAATATAGG+GGG | - | chr3_2:83354540-83354559 | None:intergenic | 15.0% |
| !! | TAAAATAAATAGAGATATGT+TGG | + | chr3_2:83354981-83355000 | Msa0431290:intron | 15.0% |
| !! | GCAAAAAAATAATTAATGTA+TGG | + | chr3_2:83355003-83355022 | Msa0431290:intron | 15.0% |
| !!! | TGATTTTTTTACTATAATCA+TGG | - | chr3_2:83355349-83355368 | None:intergenic | 15.0% |
| !!! | TTTAAAAACAAAATGTTTTC+TGG | + | chr3_2:83355410-83355429 | Msa0431290:intron | 15.0% |
| !! | ATCATCTTATTATGATTTAT+GGG | - | chr3_2:83355442-83355461 | None:intergenic | 15.0% |
| !! | TATCATCTTATTATGATTTA+TGG | - | chr3_2:83355443-83355462 | None:intergenic | 15.0% |
| !!! | TGCAAAAAATATAAGATTTT+AGG | + | chr3_2:83355697-83355716 | Msa0431290:intron | 15.0% |
| !!! | AAATGCTTTTAGTTAAATTT+TGG | + | chr3_2:83356041-83356060 | Msa0431290:intron | 15.0% |
| !! | ATTATTTATTGAATAACAAG+GGG | + | chr3_2:83356182-83356201 | Msa0431290:intron | 15.0% |
| !!! | AATTTTATTTCTAATATAGG+AGG | - | chr3_2:83356729-83356748 | None:intergenic | 15.0% |
| !!! | ATACATAAGTCAAATTTTTT+GGG | - | chr3_2:83356986-83357005 | None:intergenic | 15.0% |
| !!! | TATACATAAGTCAAATTTTT+TGG | - | chr3_2:83356987-83357006 | None:intergenic | 15.0% |
| !! | AAAAAATCATTTCAAAATCA+AGG | - | chr3_2:83357435-83357454 | None:intergenic | 15.0% |
| !! | GACATAATTTCTAACAATAA+TGG | + | chr3_2:83349563-83349582 | Msa0431290:exon | 20.0% |
| !! | ATAATTTCTAACAATAATGG+CGG | + | chr3_2:83349566-83349585 | Msa0431290:exon | 20.0% |
| !!! | CCTACAATTAATTTTTAGAT+TGG | - | chr3_2:83350236-83350255 | None:intergenic | 20.0% |
| !! | CCAATCTAAAAATTAATTGT+AGG | + | chr3_2:83350233-83350252 | Msa0431290:intron | 20.0% |
| !!! | TTCTTTTTTTTTTGGATAGA+AGG | + | chr3_2:83350459-83350478 | Msa0431290:intron | 20.0% |
| !!! | TTATTATCGTGTTGTTTTTT+AGG | + | chr3_2:83350506-83350525 | Msa0431290:intron | 20.0% |
| !! | GTTATCTTAAAAAAAGGTTT+AGG | + | chr3_2:83350595-83350614 | Msa0431290:intron | 20.0% |
| !!! | GTTGTTGTTTATTTCAATAA+AGG | + | chr3_2:83350621-83350640 | Msa0431290:intron | 20.0% |
| !!! | TTTTCAGAATGCTAATTAAT+CGG | - | chr3_2:83351212-83351231 | None:intergenic | 20.0% |
| !! | TCTGAAAAGAAAAAAAATGA+AGG | + | chr3_2:83351224-83351243 | Msa0431290:intron | 20.0% |
| !!! | TAAAGACTGCAAATTTTTAT+TGG | + | chr3_2:83352282-83352301 | Msa0431290:CDS | 20.0% |
| !!! | TTTTTATGAAGTTCTGTTTA+CGG | + | chr3_2:83353663-83353682 | Msa0431290:intron | 20.0% |
| !! | ATTGTCAGATATGTAAAATA+AGG | + | chr3_2:83353740-83353759 | Msa0431290:intron | 20.0% |
| !! | TATTCATGATATAAGATGTT+TGG | + | chr3_2:83353810-83353829 | Msa0431290:CDS | 20.0% |
| !! | AAATGAAAATATGAACAAGT+TGG | - | chr3_2:83354134-83354153 | None:intergenic | 20.0% |
| !! | TTAGCTGTATTTAAAGAAAA+TGG | + | chr3_2:83354346-83354365 | Msa0431290:intron | 20.0% |
| !! | TAGCTGTATTTAAAGAAAAT+GGG | + | chr3_2:83354347-83354366 | Msa0431290:intron | 20.0% |
| !! | ACAAAATGTCTCTTAAATAA+AGG | - | chr3_2:83354492-83354511 | None:intergenic | 20.0% |
| !! | ACAATTAATGTACAAAAACT+TGG | - | chr3_2:83354780-83354799 | None:intergenic | 20.0% |
| !!! | ATGGACAAAAAATTTAAAGT+TGG | - | chr3_2:83355330-83355349 | None:intergenic | 20.0% |
| !!! | TTTTTTCCAGTTTTTTTTCT+TGG | + | chr3_2:83355612-83355631 | Msa0431290:intron | 20.0% |
| !!! | AGGCATTAAAATTTTATTGT+TGG | + | chr3_2:83356080-83356099 | Msa0431290:intron | 20.0% |
| !!! | GGCATTAAAATTTTATTGTT+GGG | + | chr3_2:83356081-83356100 | Msa0431290:intron | 20.0% |
| !!! | TTTCTCTTTAAAAAAAGGAT+CGG | + | chr3_2:83356269-83356288 | Msa0431290:intron | 20.0% |
| !! | TAATTCCAGTAAAAAAACTA+GGG | - | chr3_2:83356444-83356463 | None:intergenic | 20.0% |
| !! | TTAATTCCAGTAAAAAAACT+AGG | - | chr3_2:83356445-83356464 | None:intergenic | 20.0% |
| !! | ACAAAATGTCTCTTATATAA+AGG | - | chr3_2:83356681-83356700 | None:intergenic | 20.0% |
| !! | CAATAATTCAGTATGTATAT+TGG | + | chr3_2:83357032-83357051 | Msa0431290:intron | 20.0% |
| !!! | CTGATGAAATTTTTATCTTT+TGG | + | chr3_2:83357206-83357225 | Msa0431290:intron | 20.0% |
| !! | TTTGTGTATTATAGATTTCA+TGG | - | chr3_2:83357722-83357741 | None:intergenic | 20.0% |
| !! | TCTATAATACACAAATTAGT+TGG | + | chr3_2:83357727-83357746 | Msa0431290:three_prime_UTR | 20.0% |
| !!! | GTTTTTTTTTTTTTGAAGGA+AGG | + | chr3_2:83357781-83357800 | Msa0431290:intron | 20.0% |
| ! | AATGTAAAGTGATTTATGCT+TGG | + | chr3_2:83350175-83350194 | Msa0431290:intron | 25.0% |
| ! | AAACATACACTTAATGTTCT+CGG | - | chr3_2:83350320-83350339 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTGGATAGAAGG+AGG | + | chr3_2:83350462-83350481 | Msa0431290:intron | 25.0% |
| !!! | TAACCTGTTTAGTTTTAGTT+AGG | + | chr3_2:83350530-83350549 | Msa0431290:intron | 25.0% |
| !!! | AACCTGTTTAGTTTTAGTTA+GGG | + | chr3_2:83350531-83350550 | Msa0431290:intron | 25.0% |
| ! | TCGGATGTTATCTTAAAAAA+AGG | + | chr3_2:83350589-83350608 | Msa0431290:intron | 25.0% |
| ! | TCTTAAAAAAAGGTTTAGGT+TGG | + | chr3_2:83350599-83350618 | Msa0431290:intron | 25.0% |
| !!! | ATAAAGGTTTCTAAAACTGA+AGG | + | chr3_2:83350637-83350656 | Msa0431290:intron | 25.0% |
| !! | TGTTTGATGACAATTATTTC+TGG | + | chr3_2:83350698-83350717 | Msa0431290:intron | 25.0% |
| !! | TATTTTGTAGGCTATGTATT+GGG | + | chr3_2:83351151-83351170 | Msa0431290:intron | 25.0% |
| !!! | CTATGTATTGGGTATTTTTT+GGG | + | chr3_2:83351162-83351181 | Msa0431290:intron | 25.0% |
| ! | AAAAAATGAAGGAAACTGAA+AGG | + | chr3_2:83351235-83351254 | Msa0431290:intron | 25.0% |
| ! | AAAAATGAAGGAAACTGAAA+GGG | + | chr3_2:83351236-83351255 | Msa0431290:intron | 25.0% |
| !! | GTAGAAACAAAATGACATTT+TGG | + | chr3_2:83351612-83351631 | Msa0431290:intron | 25.0% |
| !!! | AAACAAAATGACATTTTGGT+AGG | + | chr3_2:83351616-83351635 | Msa0431290:intron | 25.0% |
| !!! | AACAAAATGACATTTTGGTA+GGG | + | chr3_2:83351617-83351636 | Msa0431290:intron | 25.0% |
| ! | TCTTTCACTAAAAATGGTAA+AGG | - | chr3_2:83351684-83351703 | None:intergenic | 25.0% |
| ! | TTCTCCATATTCTCAATAAA+AGG | - | chr3_2:83351989-83352008 | None:intergenic | 25.0% |
| !! | AAAAGTTTCTTCTGCATTTT+TGG | - | chr3_2:83352137-83352156 | None:intergenic | 25.0% |
| !!! | TTACTTTTTCTTACCACTTT+AGG | + | chr3_2:83352330-83352349 | Msa0431290:intron | 25.0% |
| !!! | TTGTAATTTTTCAAGAACTC+TGG | - | chr3_2:83352703-83352722 | None:intergenic | 25.0% |
| ! | GAAAAATTACAAATCAAGCT+TGG | + | chr3_2:83352711-83352730 | Msa0431290:CDS | 25.0% |
| ! | CAAAATTGTTTGACACATTA+AGG | - | chr3_2:83352830-83352849 | None:intergenic | 25.0% |
| ! | TACCTGAATTATTAGTGATA+TGG | + | chr3_2:83353092-83353111 | Msa0431290:intron | 25.0% |
| ! | ATCCATATCACTAATAATTC+AGG | - | chr3_2:83353097-83353116 | None:intergenic | 25.0% |
| ! | TATCTGTAAGTTCAAAAAAG+AGG | - | chr3_2:83353420-83353439 | None:intergenic | 25.0% |
| ! | TGCATAGAAAAACAAAGTAA+AGG | - | chr3_2:83353561-83353580 | None:intergenic | 25.0% |
| !! | ACGGATTTGGTATTAAAAAA+TGG | + | chr3_2:83353682-83353701 | Msa0431290:intron | 25.0% |
| ! | ATGATTTCACGTTATGATTT+AGG | - | chr3_2:83353782-83353801 | None:intergenic | 25.0% |
| !! | AAAATATGAACAAGTTGGAA+GGG | - | chr3_2:83354129-83354148 | None:intergenic | 25.0% |
| ! | TCATTTGTACAAAATAATCC+AGG | + | chr3_2:83354148-83354167 | Msa0431290:intron | 25.0% |
| ! | TGTATTTAAAGAAAATGGGA+TGG | + | chr3_2:83354351-83354370 | Msa0431290:intron | 25.0% |
| ! | TTAATGACTCTCATTGTATT+GGG | - | chr3_2:83354585-83354604 | None:intergenic | 25.0% |
| ! | ATTAATGACTCTCATTGTAT+TGG | - | chr3_2:83354586-83354605 | None:intergenic | 25.0% |
| ! | CTTTCTTAATTGATGTGATT+TGG | - | chr3_2:83354841-83354860 | None:intergenic | 25.0% |
| ! | ATCACATCAATTAAGAAAGT+CGG | + | chr3_2:83354842-83354861 | Msa0431290:intron | 25.0% |
| !! | ACAAAGTGAGTCTTATAAAA+AGG | + | chr3_2:83355030-83355049 | Msa0431290:intron | 25.0% |
| !! | CAAAGTGAGTCTTATAAAAA+GGG | + | chr3_2:83355031-83355050 | Msa0431290:intron | 25.0% |
| !!! | ATTAAGATGGTCTTATAGTT+AGG | + | chr3_2:83355069-83355088 | Msa0431290:intron | 25.0% |
| !!! | TTAAGATGGTCTTATAGTTA+GGG | + | chr3_2:83355070-83355089 | Msa0431290:intron | 25.0% |
| ! | TTAAATATTACTCTTGCTAG+AGG | - | chr3_2:83355395-83355414 | None:intergenic | 25.0% |
| ! | TTATTATGATTTATGGGCTT+GGG | - | chr3_2:83355436-83355455 | None:intergenic | 25.0% |
| ! | GATAGATAACACTAGTTATT+TGG | + | chr3_2:83355459-83355478 | Msa0431290:intron | 25.0% |
| ! | TTAAATACCCCAAACATAAA+TGG | + | chr3_2:83355822-83355841 | Msa0431290:intron | 25.0% |
| !! | ATTCAAATATTTTGCGAATC+AGG | - | chr3_2:83355916-83355935 | None:intergenic | 25.0% |
| !! | AATGCCAAAATTGTTTTCAA+CGG | - | chr3_2:83355953-83355972 | None:intergenic | 25.0% |
| !!! | TTCTTACTCCATTTTTCTTT+GGG | - | chr3_2:83355990-83356009 | None:intergenic | 25.0% |
| !!! | ATTCTTACTCCATTTTTCTT+TGG | - | chr3_2:83355991-83356010 | None:intergenic | 25.0% |
| ! | AAAATGGAGTAAGAATCTAA+AGG | + | chr3_2:83355995-83356014 | Msa0431290:intron | 25.0% |
| ! | AAATGGAGTAAGAATCTAAA+GGG | + | chr3_2:83355996-83356015 | Msa0431290:intron | 25.0% |
| !!! | TTAACTAAAAGCATTTGTGT+GGG | - | chr3_2:83356037-83356056 | None:intergenic | 25.0% |
| !!! | TTTAACTAAAAGCATTTGTG+TGG | - | chr3_2:83356038-83356057 | None:intergenic | 25.0% |
| !!! | TGCTTTTAGTTAAATTTTGG+TGG | + | chr3_2:83356044-83356063 | Msa0431290:intron | 25.0% |
| !!! | AAATTTTGGTGGTAAATTCT+TGG | + | chr3_2:83356055-83356074 | Msa0431290:intron | 25.0% |
| !!! | GGTATTTTAGGAATATAAAG+TGG | + | chr3_2:83356203-83356222 | Msa0431290:intron | 25.0% |
| ! | AATAACTACTTTGATGTACT+TGG | + | chr3_2:83356227-83356246 | Msa0431290:intron | 25.0% |
| !!! | AATAAAAACTGAAAGTGTCT+TGG | - | chr3_2:83356338-83356357 | None:intergenic | 25.0% |
| !!! | TTAATCCCTAGTTTTTTTAC+TGG | + | chr3_2:83356436-83356455 | Msa0431290:intron | 25.0% |
| !! | GGAATTAAACAACTTTTGTT+AGG | + | chr3_2:83356457-83356476 | Msa0431290:intron | 25.0% |
| !! | ATTAAACAACTTTTGTTAGG+TGG | + | chr3_2:83356460-83356479 | Msa0431290:intron | 25.0% |
| !! | TTAAACAACTTTTGTTAGGT+GGG | + | chr3_2:83356461-83356480 | Msa0431290:intron | 25.0% |
| !!! | TACTCATTATTTTGAACTGT+TGG | + | chr3_2:83356485-83356504 | Msa0431290:intron | 25.0% |
| ! | AATAACTCTTCTTTCTTTCT+GGG | - | chr3_2:83356576-83356595 | None:intergenic | 25.0% |
| ! | TTATATTCACACATAACTTG+AGG | + | chr3_2:83356748-83356767 | Msa0431290:intron | 25.0% |
| ! | TCTACACATGCTATAAAAAA+TGG | + | chr3_2:83356901-83356920 | Msa0431290:intron | 25.0% |
| !!! | TTTGGTTTCCTATTTTAAGA+GGG | - | chr3_2:83356944-83356963 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTCCTATTTTAAG+AGG | - | chr3_2:83356945-83356964 | None:intergenic | 25.0% |
| !!! | ACAAAGGAGTATTTCATTTT+TGG | - | chr3_2:83357111-83357130 | None:intergenic | 25.0% |
| ! | AAAATTTCATCAGTGTAGTT+TGG | - | chr3_2:83357199-83357218 | None:intergenic | 25.0% |
| !!! | TGATAATGCTTGAGAAATTT+TGG | + | chr3_2:83357235-83357254 | Msa0431290:intron | 25.0% |
| ! | ATAATAAGAGTTTGCATCTA+TGG | + | chr3_2:83357633-83357652 | Msa0431290:exon | 25.0% |
| GTTAGAAATTATGTCGAGAT+TGG | - | chr3_2:83349558-83349577 | None:intergenic | 30.0% | |
| !! | ATGAATGAGTTGGTGATTTA+GGG | - | chr3_2:83349763-83349782 | None:intergenic | 30.0% |
| GATTGATAAGATGAATGAGT+TGG | - | chr3_2:83349773-83349792 | None:intergenic | 30.0% | |
| ATCAACATCAACAATGTTAG+CGG | - | chr3_2:83349823-83349842 | None:intergenic | 30.0% | |
| !!! | TCGCTTTTTCCTATTAAGAA+TGG | + | chr3_2:83349921-83349940 | Msa0431290:CDS | 30.0% |
| TGCTTCAAACCATTCTTAAT+AGG | - | chr3_2:83349933-83349952 | None:intergenic | 30.0% | |
| AAATTGTGTAAAGCTGATGT+TGG | + | chr3_2:83350138-83350157 | Msa0431290:intron | 30.0% | |
| CAAGTTAGAATCAATTCTAG+AGG | + | chr3_2:83350280-83350299 | Msa0431290:intron | 30.0% | |
| GAGAACATTAAGTGTATGTT+TGG | + | chr3_2:83350319-83350338 | Msa0431290:intron | 30.0% | |
| ! | CGTAATTGATTCTATAAGTG+TGG | + | chr3_2:83350360-83350379 | Msa0431290:intron | 30.0% |
| ! | TTTTGCCTCCAAAATTGATT+CGG | + | chr3_2:83350423-83350442 | Msa0431290:intron | 30.0% |
| AACCCTAACTAAAACTAAAC+AGG | - | chr3_2:83350536-83350555 | None:intergenic | 30.0% | |
| ! | TTTAGTTTCATTCCATTGCT+AGG | + | chr3_2:83350554-83350573 | Msa0431290:intron | 30.0% |
| !! | ATTATTTCTGGCGTTGATTT+CGG | + | chr3_2:83350710-83350729 | Msa0431290:intron | 30.0% |
| CAAGATTCATTCAAAATTGC+AGG | + | chr3_2:83350765-83350784 | Msa0431290:intron | 30.0% | |
| AAATGGAGATGTGAATTTGT+CGG | + | chr3_2:83350834-83350853 | Msa0431290:CDS | 30.0% | |
| !! | GTGTAACATAGAATTTTAGC+CGG | - | chr3_2:83350966-83350985 | None:intergenic | 30.0% |
| ATTCTATGTTACACATGCAA+AGG | + | chr3_2:83350972-83350991 | Msa0431290:CDS | 30.0% | |
| ! | TGTGTTTGTGTGTTTTATAC+TGG | + | chr3_2:83351020-83351039 | Msa0431290:intron | 30.0% |
| ! | CTATTTTGTAGGCTATGTAT+TGG | + | chr3_2:83351150-83351169 | Msa0431290:intron | 30.0% |
| !!! | GCTATGTATTGGGTATTTTT+TGG | + | chr3_2:83351161-83351180 | Msa0431290:intron | 30.0% |
| TCGTATAAATTACCTGAACA+TGG | - | chr3_2:83351283-83351302 | None:intergenic | 30.0% | |
| TTGATCATAGTGAAAAAACC+TGG | - | chr3_2:83351540-83351559 | None:intergenic | 30.0% | |
| TCTACGTCTTTCACTAAAAA+TGG | - | chr3_2:83351690-83351709 | None:intergenic | 30.0% | |
| GAATGTTACCCATTAATTCT+TGG | - | chr3_2:83351790-83351809 | None:intergenic | 30.0% | |
| TTATTGAGAATATGGAGAAG+AGG | + | chr3_2:83351990-83352009 | Msa0431290:CDS | 30.0% | |
| !!! | TGCATTTTTGGTGTTATCAA+TGG | - | chr3_2:83352125-83352144 | None:intergenic | 30.0% |
| TTATTGGATATTTCTTCAGC+TGG | + | chr3_2:83352298-83352317 | Msa0431290:CDS | 30.0% | |
| TGGTAAGAAAAAGTAAGATG+AGG | - | chr3_2:83352326-83352345 | None:intergenic | 30.0% | |
| ! | TTTCTTACCACTTTAGGTTT+AGG | + | chr3_2:83352336-83352355 | Msa0431290:intron | 30.0% |
| ATGACAGATTAAAGCTCATA+TGG | - | chr3_2:83352364-83352383 | None:intergenic | 30.0% | |
| TTTAATCTGTCATACTGGAT+TGG | + | chr3_2:83352371-83352390 | Msa0431290:intron | 30.0% | |
| !! | CTAACTTTTAAAGACCAAGA+AGG | - | chr3_2:83352438-83352457 | None:intergenic | 30.0% |
| ! | CATATCTAAAGTTTGGCATT+TGG | + | chr3_2:83352568-83352587 | Msa0431290:intron | 30.0% |
| ! | GAAAAGTAAGATTAGCTGAA+AGG | - | chr3_2:83352773-83352792 | None:intergenic | 30.0% |
| CAGAAAGAATGAAGAAAATG+TGG | + | chr3_2:83352804-83352823 | Msa0431290:intron | 30.0% | |
| ! | ATGTCATTTAATTCCATGCA+AGG | + | chr3_2:83352925-83352944 | Msa0431290:intron | 30.0% |
| !!! | TTAGAGAGTATTTTGCTTTG+AGG | + | chr3_2:83353031-83353050 | Msa0431290:CDS | 30.0% |
| AAAACAAAGTGTAACTCTGT+TGG | + | chr3_2:83353244-83353263 | Msa0431290:CDS | 30.0% | |
| TGTAAGTTCAAAAAAGAGGT+TGG | - | chr3_2:83353416-83353435 | None:intergenic | 30.0% | |
| GAACTTACAGATACTCAAAT+TGG | + | chr3_2:83353427-83353446 | Msa0431290:intron | 30.0% | |
| CACGTTATGATTTAGGTAAT+AGG | - | chr3_2:83353775-83353794 | None:intergenic | 30.0% | |
| CATAACGTGAAATCATTTGT+AGG | + | chr3_2:83353786-83353805 | Msa0431290:intron | 30.0% | |
| TCATGATATAAGATGTTTGG+AGG | + | chr3_2:83353813-83353832 | Msa0431290:CDS | 30.0% | |
| !! | TTACTGATTCAAGGACATTA+GGG | - | chr3_2:83353894-83353913 | None:intergenic | 30.0% |
| TAAAGGTTCAAAGGATTTCA+AGG | - | chr3_2:83353944-83353963 | None:intergenic | 30.0% | |
| ! | TTTGATGACTAAAGGTTCAA+AGG | - | chr3_2:83353953-83353972 | None:intergenic | 30.0% |
| ! | GAAAATATGAACAAGTTGGA+AGG | - | chr3_2:83354130-83354149 | None:intergenic | 30.0% |
| TCGATATCACATACCTTTAA+GGG | - | chr3_2:83354269-83354288 | None:intergenic | 30.0% | |
| ATCGATATCACATACCTTTA+AGG | - | chr3_2:83354270-83354289 | None:intergenic | 30.0% | |
| ! | GTGATATCGATCAAGTTTTA+TGG | + | chr3_2:83354279-83354298 | Msa0431290:intron | 30.0% |
| ACCATGAAAAGAAGTAATCA+GGG | - | chr3_2:83354320-83354339 | None:intergenic | 30.0% | |
| AACCATGAAAAGAAGTAATC+AGG | - | chr3_2:83354321-83354340 | None:intergenic | 30.0% | |
| ! | TTACTTCTTTTCATGGTTAC+TGG | + | chr3_2:83354323-83354342 | Msa0431290:intron | 30.0% |
| AGAGAAAGCTTCAATATTCA+TGG | + | chr3_2:83354417-83354436 | Msa0431290:intron | 30.0% | |
| TAATGACTCTCATTGTATTG+GGG | - | chr3_2:83354584-83354603 | None:intergenic | 30.0% | |
| TGAGTCCATGCATATATAAA+TGG | + | chr3_2:83355258-83355277 | Msa0431290:intron | 30.0% | |
| CTTATTATGATTTATGGGCT+TGG | - | chr3_2:83355437-83355456 | None:intergenic | 30.0% | |
| AAAGGATGAGAAATGAAACA+AGG | - | chr3_2:83355540-83355559 | None:intergenic | 30.0% | |
| CACAAACCAAGAAAAAAAAC+TGG | - | chr3_2:83355621-83355640 | None:intergenic | 30.0% | |
| GAGCAAATTTGAAAAATCCA+GGG | + | chr3_2:83355719-83355738 | Msa0431290:intron | 30.0% | |
| AGAGACATTCTTCATATACA+TGG | - | chr3_2:83355803-83355822 | None:intergenic | 30.0% | |
| ! | TTTGCCGTTGAAAACAATTT+TGG | + | chr3_2:83355946-83355965 | Msa0431290:intron | 30.0% |
| ATACTCAACCCAAAGAAAAA+TGG | + | chr3_2:83355979-83355998 | Msa0431290:intron | 30.0% | |
| AATGGAGTAAGAATCTAAAG+GGG | + | chr3_2:83355997-83356016 | Msa0431290:intron | 30.0% | |
| TAAATGCAGACAATTAAACG+TGG | - | chr3_2:83356126-83356145 | None:intergenic | 30.0% | |
| !!! | TGAATAACAAGGGGTATTTT+AGG | + | chr3_2:83356191-83356210 | Msa0431290:intron | 30.0% |
| ! | TCTTTAAAAAAAGGATCGGA+GGG | + | chr3_2:83356273-83356292 | Msa0431290:intron | 30.0% |
| TTACTCAATTAGTTGTGTCA+AGG | - | chr3_2:83356314-83356333 | None:intergenic | 30.0% | |
| TGTTTCTCATTGTCAGAAAA+AGG | + | chr3_2:83356357-83356376 | Msa0431290:intron | 30.0% | |
| AAAATACAGTAGTCAGTTCA+TGG | - | chr3_2:83356399-83356418 | None:intergenic | 30.0% | |
| TGAACATGTAATAATCCTGT+CGG | - | chr3_2:83356515-83356534 | None:intergenic | 30.0% | |
| CAATAACTCTTCTTTCTTTC+TGG | - | chr3_2:83356577-83356596 | None:intergenic | 30.0% | |
| !! | TGAGGAACTGAGTTTATTTT+TGG | + | chr3_2:83356654-83356673 | Msa0431290:intron | 30.0% |
| TTCTAATATAGGAGGATTGA+AGG | - | chr3_2:83356721-83356740 | None:intergenic | 30.0% | |
| AGATTGAATCCAATCTGATA+TGG | + | chr3_2:83356830-83356849 | Msa0431290:intron | 30.0% | |
| !! | CAAGAAGAGTGTTCAAAATT+GGG | - | chr3_2:83356874-83356893 | None:intergenic | 30.0% |
| !! | ACAAGAAGAGTGTTCAAAAT+TGG | - | chr3_2:83356875-83356894 | None:intergenic | 30.0% |
| ATCGAATTCCCTCTTAAAAT+AGG | + | chr3_2:83356933-83356952 | Msa0431290:intron | 30.0% | |
| !!! | CATAAGTCAAATTTTTTGGG+AGG | - | chr3_2:83356983-83357002 | None:intergenic | 30.0% |
| !!! | AGTTGGCTTTTACACAAATT+AGG | + | chr3_2:83357744-83357763 | Msa0431290:three_prime_UTR | 30.0% |
| AACCTAGTTCAATGTAGACT+GGG | - | chr3_2:83349474-83349493 | None:intergenic | 35.0% | |
| AAACCTAGTTCAATGTAGAC+TGG | - | chr3_2:83349475-83349494 | None:intergenic | 35.0% | |
| ! | ATGATTCGGAATCGAAGTTA+GGG | - | chr3_2:83349671-83349690 | None:intergenic | 35.0% |
| ! | TATGATTCGGAATCGAAGTT+AGG | - | chr3_2:83349672-83349691 | None:intergenic | 35.0% |
| !! | GATGAATGAGTTGGTGATTT+AGG | - | chr3_2:83349764-83349783 | None:intergenic | 35.0% |
| ! | TTCGTTTCATCTTGTTTCCA+AGG | + | chr3_2:83350001-83350020 | Msa0431290:CDS | 35.0% |
| ! | ATACACCTCCGAATCAATTT+TGG | - | chr3_2:83350434-83350453 | None:intergenic | 35.0% |
| TTCATTCCATTGCTAGGTTT+AGG | + | chr3_2:83350560-83350579 | Msa0431290:intron | 35.0% | |
| GATTCATTCAAAATTGCAGG+TGG | + | chr3_2:83350768-83350787 | Msa0431290:intron | 35.0% | |
| AGAAAAGTTCGTTGAGCAAT+GGG | + | chr3_2:83350857-83350876 | Msa0431290:CDS | 35.0% | |
| TCAGAATGCTAATTAATCGG+TGG | - | chr3_2:83351209-83351228 | None:intergenic | 35.0% | |
| ACAAAAAGATAGCCATGTTC+AGG | + | chr3_2:83351268-83351287 | Msa0431290:intron | 35.0% | |
| TGAACACAGACAGTAGATTA+AGG | - | chr3_2:83351366-83351385 | None:intergenic | 35.0% | |
| !! | TAGCTTTGACTGTAGTTGTT+AGG | + | chr3_2:83351401-83351420 | Msa0431290:CDS | 35.0% |
| ! | AGCTTTGACTGTAGTTGTTA+GGG | + | chr3_2:83351402-83351421 | Msa0431290:CDS | 35.0% |
| CATGTTGGTATCTCTTTGTT+TGG | + | chr3_2:83351474-83351493 | Msa0431290:intron | 35.0% | |
| TCATAGTGAAAAAACCTGGT+CGG | - | chr3_2:83351536-83351555 | None:intergenic | 35.0% | |
| ! | AAATGGTAAAGGTTCGCTTT+TGG | - | chr3_2:83351673-83351692 | None:intergenic | 35.0% |
| TTCTTGGAGTGCATCTAATA+TGG | - | chr3_2:83351774-83351793 | None:intergenic | 35.0% | |
| AGATGCACTCCAAGAATTAA+TGG | + | chr3_2:83351778-83351797 | Msa0431290:intron | 35.0% | |
| GATGCACTCCAAGAATTAAT+GGG | + | chr3_2:83351779-83351798 | Msa0431290:intron | 35.0% | |
| CATTCACAGTGTTAGATTGT+CGG | + | chr3_2:83351805-83351824 | Msa0431290:intron | 35.0% | |
| ! | ACTTCAAGGCATCTAATACT+TGG | - | chr3_2:83351849-83351868 | None:intergenic | 35.0% |
| TTAACACCAGCAAAACTTCA+AGG | - | chr3_2:83351863-83351882 | None:intergenic | 35.0% | |
| CCATATTCTCAATAAAAGGC+AGG | - | chr3_2:83351985-83352004 | None:intergenic | 35.0% | |
| ! | CCTGCCTTTTATTGAGAATA+TGG | + | chr3_2:83351982-83352001 | Msa0431290:CDS | 35.0% |
| CTATTAGTAGATGCAAGCTT+GGG | + | chr3_2:83352028-83352047 | Msa0431290:CDS | 35.0% | |
| ! | TTGTAGATGGTCTAAAACAC+CGG | + | chr3_2:83352059-83352078 | Msa0431290:CDS | 35.0% |
| TATGGATCCTAAACCTAAAG+TGG | - | chr3_2:83352346-83352365 | None:intergenic | 35.0% | |
| ! | TGAGCTTTAATCTGTCATAC+TGG | + | chr3_2:83352366-83352385 | Msa0431290:intron | 35.0% |
| TTAAAGACCAAGAAGGACTA+AGG | - | chr3_2:83352431-83352450 | None:intergenic | 35.0% | |
| CCATCTTTCACATACATGTA+CGG | + | chr3_2:83352469-83352488 | Msa0431290:intron | 35.0% | |
| ! | TTTACACGTCTTTGACTTCT+TGG | + | chr3_2:83352606-83352625 | Msa0431290:CDS | 35.0% |
| ! | AACCTCTCTAAGGATTGAAT+TGG | - | chr3_2:83352632-83352651 | None:intergenic | 35.0% |
| !! | GTTCTCTTTGCTATTCAGAA+GGG | + | chr3_2:83352649-83352668 | Msa0431290:CDS | 35.0% |
| TTCATTCTTTCTGTTGCTCA+AGG | - | chr3_2:83352797-83352816 | None:intergenic | 35.0% | |
| AAATTTAGCAACAGCAGATC+TGG | - | chr3_2:83352962-83352981 | None:intergenic | 35.0% | |
| ATTCCATTGCTTCATGAACT+CGG | - | chr3_2:83353004-83353023 | None:intergenic | 35.0% | |
| AGTTCATGAAGCAATGGAAT+TGG | + | chr3_2:83353004-83353023 | Msa0431290:CDS | 35.0% | |
| ! | GGTGATTCTGATCTTTAAGA+TGG | + | chr3_2:83353052-83353071 | Msa0431290:intron | 35.0% |
| TTAGGTTTCAGGAAATAGCA+GGG | + | chr3_2:83353135-83353154 | Msa0431290:intron | 35.0% | |
| ! | CAGGATCTAAATTTTGAACG+GGG | - | chr3_2:83353196-83353215 | None:intergenic | 35.0% |
| ! | CCAGGATCTAAATTTTGAAC+GGG | - | chr3_2:83353197-83353216 | None:intergenic | 35.0% |
| ! | GCCAGGATCTAAATTTTGAA+CGG | - | chr3_2:83353198-83353217 | None:intergenic | 35.0% |
| ! | CTTCTTTCTAGGTCAGTTTT+AGG | + | chr3_2:83353344-83353363 | Msa0431290:intron | 35.0% |
| GATGTTTCAGATGTCATAGA+TGG | + | chr3_2:83353513-83353532 | Msa0431290:CDS | 35.0% | |
| TGAAGTTCTGTTTACGGATT+TGG | + | chr3_2:83353669-83353688 | Msa0431290:intron | 35.0% | |
| !! | TACTGATTCAAGGACATTAG+GGG | - | chr3_2:83353893-83353912 | None:intergenic | 35.0% |
| !! | CTTACTGATTCAAGGACATT+AGG | - | chr3_2:83353895-83353914 | None:intergenic | 35.0% |
| CTAATGTCCTTGAATCAGTA+AGG | + | chr3_2:83353893-83353912 | Msa0431290:CDS | 35.0% | |
| TTGGTTGCATTATTCAGATC+TGG | + | chr3_2:83354042-83354061 | Msa0431290:intron | 35.0% | |
| ! | ACCCTGATTACTTCTTTTCA+TGG | + | chr3_2:83354316-83354335 | Msa0431290:intron | 35.0% |
| ATGGGATGGTGATATATTTC+TGG | + | chr3_2:83354365-83354384 | Msa0431290:intron | 35.0% | |
| GCTTCAATATTCATGGTGAT+TGG | + | chr3_2:83354424-83354443 | Msa0431290:intron | 35.0% | |
| TACTAATATAGGGGGATTGA+AGG | - | chr3_2:83354532-83354551 | None:intergenic | 35.0% | |
| ACATCAATTAAGAAAGTCGG+TGG | + | chr3_2:83354845-83354864 | Msa0431290:intron | 35.0% | |
| ! | AGGTGCAAAAGGAAATTTTC+AGG | + | chr3_2:83355664-83355683 | Msa0431290:intron | 35.0% |
| ! | GGTGCAAAAGGAAATTTTCA+GGG | + | chr3_2:83355665-83355684 | Msa0431290:intron | 35.0% |
| GGAGCAAATTTGAAAAATCC+AGG | + | chr3_2:83355718-83355737 | Msa0431290:intron | 35.0% | |
| TCCTACTCCATTTATGTTTG+GGG | - | chr3_2:83355832-83355851 | None:intergenic | 35.0% | |
| CTCCTACTCCATTTATGTTT+GGG | - | chr3_2:83355833-83355852 | None:intergenic | 35.0% | |
| ! | CTCTTTAAAAAAAGGATCGG+AGG | + | chr3_2:83356272-83356291 | Msa0431290:intron | 35.0% |
| AACTACACTCATGCAAATTG+AGG | + | chr3_2:83356636-83356655 | Msa0431290:intron | 35.0% | |
| TTGAATCCAATCTGATATGG+TGG | + | chr3_2:83356833-83356852 | Msa0431290:intron | 35.0% | |
| TGAATCCAATCTGATATGGT+GGG | + | chr3_2:83356834-83356853 | Msa0431290:intron | 35.0% | |
| ! | TATGTATATTGGTGACATGC+AGG | + | chr3_2:83357043-83357062 | Msa0431290:intron | 35.0% |
| TGGGGAGAAAATCTCATATT+TGG | + | chr3_2:83357076-83357095 | Msa0431290:CDS | 35.0% | |
| TCTTACCACAGTAACAAAGT+CGG | - | chr3_2:83357174-83357193 | None:intergenic | 35.0% | |
| AGAAAGAATTCACAGTTTGC+AGG | - | chr3_2:83357469-83357488 | None:intergenic | 35.0% | |
| TTGCATCCTATGGTTCATTA+TGG | + | chr3_2:83357572-83357591 | Msa0431290:CDS | 35.0% | |
| !! | GAAACCGTTTTGGATGTTGA+GGG | - | chr3_2:83349521-83349540 | None:intergenic | 40.0% |
| ! | GAGAATGATCGAAACCGTTT+TGG | - | chr3_2:83349531-83349550 | None:intergenic | 40.0% |
| ! | TGATTCGGAATCGAAGTTAG+GGG | - | chr3_2:83349670-83349689 | None:intergenic | 40.0% |
| GAGTTGGGAGATGTATGATT+CGG | - | chr3_2:83349685-83349704 | None:intergenic | 40.0% | |
| ! | GGTAGTTGTTGAGTTGTGAA+CGG | - | chr3_2:83349734-83349753 | None:intergenic | 40.0% |
| !! | GTTGGTGATTTAGGGATGAA+AGG | - | chr3_2:83349755-83349774 | None:intergenic | 40.0% |
| !! | GATGAAAGCATTGTGTACCT+TGG | - | chr3_2:83350021-83350040 | None:intergenic | 40.0% |
| ! | ATGTTTGGTTCCTCTTCTAG+AGG | + | chr3_2:83350334-83350353 | Msa0431290:intron | 40.0% |
| ! | TGTTTGGTTCCTCTTCTAGA+GGG | + | chr3_2:83350335-83350354 | Msa0431290:intron | 40.0% |
| ! | AGGAGGTGTATCTGTTTAGT+AGG | + | chr3_2:83350479-83350498 | Msa0431290:intron | 40.0% |
| CCTAAACCTAAACCTAGCAA+TGG | - | chr3_2:83350569-83350588 | None:intergenic | 40.0% | |
| ! | CCATTGCTAGGTTTAGGTTT+AGG | + | chr3_2:83350566-83350585 | Msa0431290:intron | 40.0% |
| ! | TGCTAGGTTTAGGTTTAGGT+CGG | + | chr3_2:83350570-83350589 | Msa0431290:intron | 40.0% |
| GAAGGAACTCTTTCATCTTC+TGG | + | chr3_2:83350655-83350674 | Msa0431290:intron | 40.0% | |
| GCAGGTGGAGAAACTAATAA+AGG | + | chr3_2:83350783-83350802 | Msa0431290:intron | 40.0% | |
| GAGAAAAGTTCGTTGAGCAA+TGG | + | chr3_2:83350856-83350875 | Msa0431290:CDS | 40.0% | |
| GAAAAGTTCGTTGAGCAATG+GGG | + | chr3_2:83350858-83350877 | Msa0431290:CDS | 40.0% | |
| ! | TGAACTTGTTTGCTGAAGCT+TGG | + | chr3_2:83351109-83351128 | Msa0431290:intron | 40.0% |
| CCTACAAAATAGTGTACCCT+TGG | - | chr3_2:83351142-83351161 | None:intergenic | 40.0% | |
| !! | CCAAGGGTACACTATTTTGT+AGG | + | chr3_2:83351139-83351158 | Msa0431290:intron | 40.0% |
| TATACTTAACCAGTCGCTGA+AGG | + | chr3_2:83351339-83351358 | Msa0431290:intron | 40.0% | |
| ACTGTAGTTGTTAGGGTCAA+TGG | + | chr3_2:83351409-83351428 | Msa0431290:CDS | 40.0% | |
| ! | GTTGGTATCTCTTTGTTTGG+AGG | + | chr3_2:83351477-83351496 | Msa0431290:intron | 40.0% |
| TTGGTAGGGTTTGTCTAACA+TGG | + | chr3_2:83351631-83351650 | Msa0431290:intron | 40.0% | |
| !! | TTCGCTTTTGGACCATCTTT+GGG | - | chr3_2:83351661-83351680 | None:intergenic | 40.0% |
| ! | TAGATGCCTTGAAGTTTTGC+TGG | + | chr3_2:83351854-83351873 | Msa0431290:intron | 40.0% |
| ATAAAAGGCAGGTTCTGTAC+TGG | - | chr3_2:83351974-83351993 | None:intergenic | 40.0% | |
| CCAAGCTTGCATCTACTAAT+AGG | - | chr3_2:83352030-83352049 | None:intergenic | 40.0% | |
| CCTATTAGTAGATGCAAGCT+TGG | + | chr3_2:83352027-83352046 | Msa0431290:CDS | 40.0% | |
| TTGGGACATTGCTTTGTAGA+TGG | + | chr3_2:83352046-83352065 | Msa0431290:CDS | 40.0% | |
| ! | TGTAGATGGTCTAAAACACC+GGG | + | chr3_2:83352060-83352079 | Msa0431290:CDS | 40.0% |
| TGTAAATTGCAGTTGCATCC+CGG | - | chr3_2:83352081-83352100 | None:intergenic | 40.0% | |
| GGGATAATCTTCTGCATCAA+TGG | - | chr3_2:83352178-83352197 | None:intergenic | 40.0% | |
| ATGCAGAAGATTATCCCACA+TGG | + | chr3_2:83352181-83352200 | Msa0431290:CDS | 40.0% | |
| TGCAGAAGATTATCCCACAT+GGG | + | chr3_2:83352182-83352201 | Msa0431290:CDS | 40.0% | |
| CCGTACATGTATGTGAAAGA+TGG | - | chr3_2:83352472-83352491 | None:intergenic | 40.0% | |
| ! | ACATACATGTACGGTTAGCT+AGG | + | chr3_2:83352478-83352497 | Msa0431290:intron | 40.0% |
| ! | ACGGTTAGCTAGGTCATTTA+TGG | + | chr3_2:83352488-83352507 | Msa0431290:intron | 40.0% |
| GTCATTTATGGTCATGCTTG+TGG | + | chr3_2:83352500-83352519 | Msa0431290:intron | 40.0% | |
| !! | GCATTTGGTGCAGAAAATTC+AGG | + | chr3_2:83352583-83352602 | Msa0431290:intron | 40.0% |
| TAGCAAAGAGAACCTCTCTA+AGG | - | chr3_2:83352642-83352661 | None:intergenic | 40.0% | |
| !! | GGTTCTCTTTGCTATTCAGA+AGG | + | chr3_2:83352648-83352667 | Msa0431290:CDS | 40.0% |
| CAAATCAAGCTTGGAGTTCT+TGG | + | chr3_2:83352720-83352739 | Msa0431290:CDS | 40.0% | |
| GAGTTCTTGGCTTATCTAGA+AGG | + | chr3_2:83352733-83352752 | Msa0431290:CDS | 40.0% | |
| ATACCGAGTTCATGAAGCAA+TGG | + | chr3_2:83352998-83353017 | Msa0431290:CDS | 40.0% | |
| CTCATATCGTCAATTGCCTT+AGG | + | chr3_2:83353117-83353136 | Msa0431290:intron | 40.0% | |
| !! | CTGCTATTTCCTGAAACCTA+AGG | - | chr3_2:83353136-83353155 | None:intergenic | 40.0% |
| CTTAGGTTTCAGGAAATAGC+AGG | + | chr3_2:83353134-83353153 | Msa0431290:intron | 40.0% | |
| ! | TCTAAATTTTGAACGGGGAC+AGG | - | chr3_2:83353191-83353210 | None:intergenic | 40.0% |
| CCCGTTCAAAATTTAGATCC+TGG | + | chr3_2:83353194-83353213 | Msa0431290:CDS | 40.0% | |
| !! | TCTTGATAATTTGCTTCGCC+AGG | - | chr3_2:83353215-83353234 | None:intergenic | 40.0% |
| GGAATTTGTCGGAACAAGAA+AGG | - | chr3_2:83353307-83353326 | None:intergenic | 40.0% | |
| !!! | CTTTCTAGGTCAGTTTTAGG+TGG | + | chr3_2:83353347-83353366 | Msa0431290:intron | 40.0% |
| AAGAGTCATAACACAAGCAC+CGG | + | chr3_2:83353474-83353493 | Msa0431290:CDS | 40.0% | |
| AGTCTTCAACACACAGATGT+GGG | - | chr3_2:83353603-83353622 | None:intergenic | 40.0% | |
| AAGTCTTCAACACACAGATG+TGG | - | chr3_2:83353604-83353623 | None:intergenic | 40.0% | |
| TGGTGATTACTTACAACACG+TGG | + | chr3_2:83353846-83353865 | Msa0431290:CDS | 40.0% | |
| TTACTTACAACACGTGGTTC+AGG | + | chr3_2:83353852-83353871 | Msa0431290:CDS | 40.0% | |
| ACCTTTAGTCATCAAAGCAG+TGG | + | chr3_2:83353957-83353976 | Msa0431290:CDS | 40.0% | |
| ! | ACCACTGCTTTGATGACTAA+AGG | - | chr3_2:83353961-83353980 | None:intergenic | 40.0% |
| TTTAGTCATCAAAGCAGTGG+TGG | + | chr3_2:83353960-83353979 | Msa0431290:CDS | 40.0% | |
| ! | AACAAGTTGGAAGGGAAATG+GGG | - | chr3_2:83354121-83354140 | None:intergenic | 40.0% |
| ! | GAACAAGTTGGAAGGGAAAT+GGG | - | chr3_2:83354122-83354141 | None:intergenic | 40.0% |
| ! | TGAACAAGTTGGAAGGGAAA+TGG | - | chr3_2:83354123-83354142 | None:intergenic | 40.0% |
| CTAATAAGCCTCTACCTGTT+AGG | + | chr3_2:83354213-83354232 | Msa0431290:CDS | 40.0% | |
| ACATATGGTGATTGCCTAAC+AGG | - | chr3_2:83354230-83354249 | None:intergenic | 40.0% | |
| CGTAATACTCCAGCAACATA+TGG | - | chr3_2:83354245-83354264 | None:intergenic | 40.0% | |
| ! | TGGAGTATTACGTCCCTTAA+AGG | + | chr3_2:83354253-83354272 | Msa0431290:CDS | 40.0% |
| ! | AAGGTATTCACCGATAACCA+TGG | + | chr3_2:83354656-83354675 | Msa0431290:intron | 40.0% |
| AGGTATTCACCGATAACCAT+GGG | + | chr3_2:83354657-83354676 | Msa0431290:intron | 40.0% | |
| ! | GGTCTTATAGTTAGGGACAA+TGG | + | chr3_2:83355077-83355096 | Msa0431290:intron | 40.0% |
| GCACGCCATTTATATATGCA+TGG | - | chr3_2:83355266-83355285 | None:intergenic | 40.0% | |
| CATATATAAATGGCGTGCAG+TGG | + | chr3_2:83355268-83355287 | Msa0431290:intron | 40.0% | |
| CAAGGAAGAAGATGAAACAG+TGG | - | chr3_2:83355522-83355541 | None:intergenic | 40.0% | |
| GGATAGAGCAAAGTGGAAAA+AGG | - | chr3_2:83355558-83355577 | None:intergenic | 40.0% | |
| AAGAACAGGATAGAGCAAAG+TGG | - | chr3_2:83355565-83355584 | None:intergenic | 40.0% | |
| ACCCCAAACATAAATGGAGT+AGG | + | chr3_2:83355828-83355847 | Msa0431290:intron | 40.0% | |
| GCTCCTACTCCATTTATGTT+TGG | - | chr3_2:83355834-83355853 | None:intergenic | 40.0% | |
| ATAAATGGAGTAGGAGCTAG+AGG | + | chr3_2:83355837-83355856 | Msa0431290:intron | 40.0% | |
| TAAATGGAGTAGGAGCTAGA+GGG | + | chr3_2:83355838-83355857 | Msa0431290:intron | 40.0% | |
| GGATGTCTTTCCTTTGCATT+TGG | + | chr3_2:83355882-83355901 | Msa0431290:intron | 40.0% | |
| TGTCTTTCCTTTGCATTTGG+TGG | + | chr3_2:83355885-83355904 | Msa0431290:intron | 40.0% | |
| ! | GGATTTTCCACCAAATGCAA+AGG | - | chr3_2:83355895-83355914 | None:intergenic | 40.0% |
| ! | TTGGTGGTAAATTCTTGGCA+AGG | + | chr3_2:83356060-83356079 | Msa0431290:intron | 40.0% |
| ! | TCTTTCTGGGTTGAAATGTG+AGG | - | chr3_2:83356563-83356582 | None:intergenic | 40.0% |
| !! | GTGCTTAGCTTGTTAGTTAG+AGG | + | chr3_2:83356602-83356621 | Msa0431290:intron | 40.0% |
| !!! | GTGCTTAGCTTTTGAGTTAG+AGG | + | chr3_2:83356787-83356806 | Msa0431290:intron | 40.0% |
| ! | GGTTCGTCATCTTGATCTTT+TGG | - | chr3_2:83356962-83356981 | None:intergenic | 40.0% |
| TAATCTCAGTTGCAGCACAA+AGG | - | chr3_2:83357127-83357146 | None:intergenic | 40.0% | |
| TTGGTTACGAGTAGTCAAGA+AGG | + | chr3_2:83357254-83357273 | Msa0431290:intron | 40.0% | |
| CTGTTCCTTGATATTCAGGT+AGG | + | chr3_2:83357385-83357404 | Msa0431290:intron | 40.0% | |
| TCATGCCTACCTGAATATCA+AGG | - | chr3_2:83357393-83357412 | None:intergenic | 40.0% | |
| GCAGTCAATATTGCATCCTA+TGG | + | chr3_2:83357562-83357581 | Msa0431290:CDS | 40.0% | |
| ACACTGCCATAATGAACCAT+AGG | - | chr3_2:83357581-83357600 | None:intergenic | 40.0% | |
| ATTGTGTTCTGCTTATCTGC+TGG | - | chr3_2:83357610-83357629 | None:intergenic | 40.0% | |
| TTGCATCTATGGAGTAGATG+CGG | + | chr3_2:83357644-83357663 | Msa0431290:three_prime_UTR | 40.0% | |
| ! | AGGTTGATTGCTTTCTTGTG+TGG | + | chr3_2:83357672-83357691 | Msa0431290:three_prime_UTR | 40.0% |
| CACTCCCTCAACATCCAAAA+CGG | + | chr3_2:83349514-83349533 | Msa0431290:five_prime_UTR | 45.0% | |
| !! | CGAAACCGTTTTGGATGTTG+AGG | - | chr3_2:83349522-83349541 | None:intergenic | 45.0% |
| !! | TGTTGATGTTGATGACGCTG+TGG | + | chr3_2:83349830-83349849 | Msa0431290:CDS | 45.0% |
| AAGCTCCAAAGTCTCTCTAG+CGG | - | chr3_2:83349973-83349992 | None:intergenic | 45.0% | |
| ! | GTTTGGTTCCTCTTCTAGAG+GGG | + | chr3_2:83350336-83350355 | Msa0431290:intron | 45.0% |
| ! | AATTACGACCCCTCTAGAAG+AGG | - | chr3_2:83350347-83350366 | None:intergenic | 45.0% |
| !! | TGCCTCCAAAATTGATTCGG+AGG | + | chr3_2:83350426-83350445 | Msa0431290:intron | 45.0% |
| ! | CACCTCCGAATCAATTTTGG+AGG | - | chr3_2:83350431-83350450 | None:intergenic | 45.0% |
| !! | GCGTTGATTTCGGAAACCTT+CGG | + | chr3_2:83350720-83350739 | Msa0431290:intron | 45.0% |
| !! | CGTTGATTTCGGAAACCTTC+GGG | + | chr3_2:83350721-83350740 | Msa0431290:intron | 45.0% |
| ! | GTTGATTTCGGAAACCTTCG+GGG | + | chr3_2:83350722-83350741 | Msa0431290:intron | 45.0% |
| ! | ATAGACTCCGACTGGTCAAA+TGG | + | chr3_2:83350817-83350836 | Msa0431290:CDS | 45.0% |
| CACATCTCCATTTGACCAGT+CGG | - | chr3_2:83350827-83350846 | None:intergenic | 45.0% | |
| ACTGTGCAACATGTCGAGAA+TGG | + | chr3_2:83350883-83350902 | Msa0431290:CDS | 45.0% | |
| CTGTGCAACATGTCGAGAAT+GGG | + | chr3_2:83350884-83350903 | Msa0431290:CDS | 45.0% | |
| GAATTGCCAGTGAGATGAAC+CGG | + | chr3_2:83350944-83350963 | Msa0431290:CDS | 45.0% | |
| !! | TTTTAGCCGGTTCATCTCAC+TGG | - | chr3_2:83350953-83350972 | None:intergenic | 45.0% |
| CTACTGTCTGTGTTCACTGT+TGG | + | chr3_2:83351370-83351389 | Msa0431290:CDS | 45.0% | |
| TGGACTGCGAAAGTCTAGAA+AGG | + | chr3_2:83351429-83351448 | Msa0431290:CDS | 45.0% | |
| GGACTGCGAAAGTCTAGAAA+GGG | + | chr3_2:83351430-83351449 | Msa0431290:CDS | 45.0% | |
| AGGGAACTATTGTGTGTGTG+TGG | + | chr3_2:83351449-83351468 | Msa0431290:intron | 45.0% | |
| TGTGTGTGTGTGGTTCATGT+TGG | + | chr3_2:83351459-83351478 | Msa0431290:intron | 45.0% | |
| GAATAAACTTGGAACCGACC+AGG | + | chr3_2:83351519-83351538 | Msa0431290:intron | 45.0% | |
| TAACATGGACCTCCCAAAGA+TGG | + | chr3_2:83351646-83351665 | Msa0431290:intron | 45.0% | |
| !! | GTTCGCTTTTGGACCATCTT+TGG | - | chr3_2:83351662-83351681 | None:intergenic | 45.0% |
| AGAAGGACTAAGGAATGCCT+CGG | - | chr3_2:83352421-83352440 | None:intergenic | 45.0% | |
| AGGCATTCCTTAGTCCTTCT+TGG | + | chr3_2:83352421-83352440 | Msa0431290:intron | 45.0% | |
| GGCCAATTCAATCCTTAGAG+AGG | + | chr3_2:83352627-83352646 | Msa0431290:CDS | 45.0% | |
| GCTATTCAGAAGGGAAAACC+AGG | + | chr3_2:83352658-83352677 | Msa0431290:CDS | 45.0% | |
| ! | AAACCAGGTGCATTTTCTCC+TGG | + | chr3_2:83352673-83352692 | Msa0431290:CDS | 45.0% |
| ! | TTCAAGAACTCTGGTCTTCC+AGG | - | chr3_2:83352694-83352713 | None:intergenic | 45.0% |
| TTAGCAACAGCAGATCTGGA+CGG | - | chr3_2:83352958-83352977 | None:intergenic | 45.0% | |
| CGTCAATTGCCTTAGGTTTC+AGG | + | chr3_2:83353124-83353143 | Msa0431290:intron | 45.0% | |
| ! | TGGAGAGTTTGAGATTGTGC+TGG | + | chr3_2:83353264-83353283 | Msa0431290:CDS | 45.0% |
| TAGAAAGAAGCTGCAAGGAG+AGG | - | chr3_2:83353334-83353353 | None:intergenic | 45.0% | |
| TCTCCTTGCAGCTTCTTTCT+AGG | + | chr3_2:83353333-83353352 | Msa0431290:CDS | 45.0% | |
| TGACCTAGAAAGAAGCTGCA+AGG | - | chr3_2:83353339-83353358 | None:intergenic | 45.0% | |
| !! | TGTCATCTGTACTGACTGCA+TGG | + | chr3_2:83353451-83353470 | Msa0431290:CDS | 45.0% |
| TGTTTGGAGGATCATGTTCG+TGG | + | chr3_2:83353826-83353845 | Msa0431290:CDS | 45.0% | |
| !! | TGCTCTGCCTTACTGATTCA+AGG | - | chr3_2:83353903-83353922 | None:intergenic | 45.0% |
| TCTGGTGGAAAAATCAGTCG+AGG | + | chr3_2:83353987-83354006 | Msa0431290:CDS | 45.0% | |
| GTGGAAAAATCAGTCGAGGT+AGG | + | chr3_2:83353991-83354010 | Msa0431290:intron | 45.0% | |
| ! | ACAAGTTGGAAGGGAAATGG+GGG | - | chr3_2:83354120-83354139 | None:intergenic | 45.0% |
| CAGGACTTGAGACAGATGAA+GGG | + | chr3_2:83354167-83354186 | Msa0431290:intron | 45.0% | |
| AGGACTTGAGACAGATGAAG+GGG | + | chr3_2:83354168-83354187 | Msa0431290:intron | 45.0% | |
| AGGCAATCACCATATGTTGC+TGG | + | chr3_2:83354233-83354252 | Msa0431290:CDS | 45.0% | |
| !!! | TTTTTTGTGCCTCGTGCATG+GGG | - | chr3_2:83354638-83354657 | None:intergenic | 45.0% |
| !!! | CTTTTTTGTGCCTCGTGCAT+GGG | - | chr3_2:83354639-83354658 | None:intergenic | 45.0% |
| AATTTGCACCCCCTTACCTA+GGG | - | chr3_2:83354703-83354722 | None:intergenic | 45.0% | |
| AAATTTGCACCCCCTTACCT+AGG | - | chr3_2:83354704-83354723 | None:intergenic | 45.0% | |
| GGAAGAAGATGAAACAGTGG+CGG | - | chr3_2:83355519-83355538 | None:intergenic | 45.0% | |
| GTGTCGCACAATAGAAGAAC+AGG | - | chr3_2:83355579-83355598 | None:intergenic | 45.0% | |
| ! | TGGTTTGTGAGAGCAAGAGT+TGG | + | chr3_2:83355632-83355651 | Msa0431290:intron | 45.0% |
| TTGAAAAATCCAGGGTGTGC+AGG | + | chr3_2:83355727-83355746 | Msa0431290:intron | 45.0% | |
| AAATGGAGTAGGAGCTAGAG+GGG | + | chr3_2:83355839-83355858 | Msa0431290:intron | 45.0% | |
| GGCAGTCGATATGCAATCTA+CGG | + | chr3_2:83355860-83355879 | Msa0431290:intron | 45.0% | |
| GCAGTCGATATGCAATCTAC+GGG | + | chr3_2:83355861-83355880 | Msa0431290:intron | 45.0% | |
| !! | TAGCTTGTTAGTTAGAGGCC+AGG | + | chr3_2:83356607-83356626 | Msa0431290:intron | 45.0% |
| !! | AGCTTGTTAGTTAGAGGCCA+GGG | + | chr3_2:83356608-83356627 | Msa0431290:intron | 45.0% |
| !!! | TAGCTTTTGAGTTAGAGGCC+AGG | + | chr3_2:83356792-83356811 | Msa0431290:intron | 45.0% |
| !!! | AGCTTTTGAGTTAGAGGCCA+GGG | + | chr3_2:83356793-83356812 | Msa0431290:intron | 45.0% |
| ! | ATCCAATCTGATATGGTGGG+TGG | + | chr3_2:83356837-83356856 | Msa0431290:intron | 45.0% |
| CAGCTGCATATGCATTCTGT+CGG | - | chr3_2:83357368-83357387 | None:intergenic | 45.0% | |
| GCAGCTGTTCCTTGATATTC+AGG | + | chr3_2:83357381-83357400 | Msa0431290:CDS | 45.0% | |
| GGCATGATACTTGCAAGACA+TGG | + | chr3_2:83357406-83357425 | Msa0431290:intron | 45.0% | |
| AGAGATTACAGGCATACTCC+TGG | - | chr3_2:83357525-83357544 | None:intergenic | 45.0% | |
| TGGTTCATTATGGCAGTGTG+TGG | + | chr3_2:83357582-83357601 | Msa0431290:CDS | 45.0% | |
| !! | TTATTATAATAAATAAAAAG+GGG | + | chr3_2:83351711-83351730 | Msa0431290:intron | 5.0% |
| !! | TATAATTTATTACTAATATA+GGG | - | chr3_2:83354542-83354561 | None:intergenic | 5.0% |
| !! | ATATAATTTATTACTAATAT+AGG | - | chr3_2:83354543-83354562 | None:intergenic | 5.0% |
| !!! | ATAAATTTTATTTCTAATAT+AGG | - | chr3_2:83356732-83356751 | None:intergenic | 5.0% |
| GGTCTGTGATGCGCTAGAAT+AGG | - | chr3_2:83349594-83349613 | None:intergenic | 50.0% | |
| ! | GTTCGGGTTTGAACCAGAGA+GGG | - | chr3_2:83349638-83349657 | None:intergenic | 50.0% |
| TCGAAGTTAGGGGAGAGGAA+GGG | - | chr3_2:83349660-83349679 | None:intergenic | 50.0% | |
| ATCGAAGTTAGGGGAGAGGA+AGG | - | chr3_2:83349661-83349680 | None:intergenic | 50.0% | |
| ! | TTGTGAACGGAGAGTGTGGA+GGG | - | chr3_2:83349721-83349740 | None:intergenic | 50.0% |
| TGAGTTGTGAACGGAGAGTG+TGG | - | chr3_2:83349725-83349744 | None:intergenic | 50.0% | |
| TTCTCTCTCAGCTCGACAAG+CGG | - | chr3_2:83349870-83349889 | None:intergenic | 50.0% | |
| TGCTTCCGCTAGAGAGACTT+TGG | + | chr3_2:83349965-83349984 | Msa0431290:CDS | 50.0% | |
| AACCTTCGGGGTGAGATGAA+AGG | + | chr3_2:83350734-83350753 | Msa0431290:intron | 50.0% | |
| TGCCTAGTATAGACTCCGAC+TGG | + | chr3_2:83350809-83350828 | Msa0431290:CDS | 50.0% | |
| GACCAGTCGGAGTCTATACT+AGG | - | chr3_2:83350814-83350833 | None:intergenic | 50.0% | |
| GTCGAGAATGGGACAAGTCT+CGG | + | chr3_2:83350895-83350914 | Msa0431290:CDS | 50.0% | |
| AGAGACTCAAAGCATGCTGC+TGG | + | chr3_2:83350918-83350937 | Msa0431290:CDS | 50.0% | |
| ! | GTTTGCTGAAGCTTGGTGAG+AGG | + | chr3_2:83351116-83351135 | Msa0431290:intron | 50.0% |
| GATTAAGGACCTTCAGCGAC+TGG | - | chr3_2:83351351-83351370 | None:intergenic | 50.0% | |
| ! | GCTTTTGGACCATCTTTGGG+AGG | - | chr3_2:83351658-83351677 | None:intergenic | 50.0% |
| ! | CAGCTGATGATGACCCATGT+GGG | - | chr3_2:83352198-83352217 | None:intergenic | 50.0% |
| ACATGGGTCATCATCAGCTG+CGG | + | chr3_2:83352198-83352217 | Msa0431290:CDS | 50.0% | |
| CTGCTGGATCATCTGAGGAT+GGG | + | chr3_2:83352221-83352240 | Msa0431290:CDS | 50.0% | |
| CTTCCAGGAGAAAATGCACC+TGG | - | chr3_2:83352679-83352698 | None:intergenic | 50.0% | |
| ! | ATTTTGAACGGGGACAGGAC+TGG | - | chr3_2:83353186-83353205 | None:intergenic | 50.0% |
| GGAGAGGCGAAGGAATTTGT+CGG | - | chr3_2:83353318-83353337 | None:intergenic | 50.0% | |
| !! | ATAACACAAGCACCGGCACT+GGG | + | chr3_2:83353481-83353500 | Msa0431290:CDS | 50.0% |
| ! | CAAGTTGGAAGGGAAATGGG+GGG | - | chr3_2:83354119-83354138 | None:intergenic | 50.0% |
| CCTTCATCTGTCTCAAGTCC+TGG | - | chr3_2:83354169-83354188 | None:intergenic | 50.0% | |
| CCAGGACTTGAGACAGATGA+AGG | + | chr3_2:83354166-83354185 | Msa0431290:intron | 50.0% | |
| GGTGATTGCCTAACAGGTAG+AGG | - | chr3_2:83354224-83354243 | None:intergenic | 50.0% | |
| ATGGGGATGAGTGGGGAAAA+GGG | - | chr3_2:83354621-83354640 | None:intergenic | 50.0% | |
| !!! | CCTTTTTTGTGCCTCGTGCA+TGG | - | chr3_2:83354640-83354659 | None:intergenic | 50.0% |
| CCATGCACGAGGCACAAAAA+AGG | + | chr3_2:83354637-83354656 | Msa0431290:intron | 50.0% | |
| GTATCCAGGACCCTAGGTAA+GGG | + | chr3_2:83354690-83354709 | Msa0431290:intron | 50.0% | |
| TATCCAGGACCCTAGGTAAG+GGG | + | chr3_2:83354691-83354710 | Msa0431290:intron | 50.0% | |
| ! | GCAAGAGTTGGTCAGATCAG+AGG | + | chr3_2:83355644-83355663 | Msa0431290:intron | 50.0% |
| ! | GGTCAGATCAGAGGTGCAAA+AGG | + | chr3_2:83355653-83355672 | Msa0431290:intron | 50.0% |
| GCGGATCTACACTTGGTTGA+GGG | - | chr3_2:83355759-83355778 | None:intergenic | 50.0% | |
| GCATTAAACCGTCCCATCAG+GGG | - | chr3_2:83355781-83355800 | None:intergenic | 50.0% | |
| GGCATTAAACCGTCCCATCA+GGG | - | chr3_2:83355782-83355801 | None:intergenic | 50.0% | |
| TGGCATTAAACCGTCCCATC+AGG | - | chr3_2:83355783-83355802 | None:intergenic | 50.0% | |
| TGAACTGTTGGAAGTCCGAC+AGG | + | chr3_2:83356497-83356516 | Msa0431290:intron | 50.0% | |
| TCACTGCTTCTGTGAGCCAT+TGG | + | chr3_2:83356537-83356556 | Msa0431290:intron | 50.0% | |
| GGGTTGAAATGTGAGGCCAA+TGG | - | chr3_2:83356556-83356575 | None:intergenic | 50.0% | |
| TTGTTAGTTAGAGGCCAGGG+TGG | + | chr3_2:83356611-83356630 | Msa0431290:intron | 50.0% | |
| TGTTAGTTAGAGGCCAGGGT+GGG | + | chr3_2:83356612-83356631 | Msa0431290:intron | 50.0% | |
| ATGAGTGTAGTTTCCCACCC+TGG | - | chr3_2:83356628-83356647 | None:intergenic | 50.0% | |
| TCTGCATGAGTGTAGTTCCC+TGG | - | chr3_2:83356813-83356832 | None:intergenic | 50.0% | |
| TGCCACCCACCATATCAGAT+TGG | - | chr3_2:83356842-83356861 | None:intergenic | 50.0% | |
| ! | TGGTGACATGCAGGCGTTTT+TGG | + | chr3_2:83357052-83357071 | Msa0431290:intron | 50.0% |
| ! | GGTGACATGCAGGCGTTTTT+GGG | + | chr3_2:83357053-83357072 | Msa0431290:intron | 50.0% |
| !!! | ACATGCAGGCGTTTTTGGGT+GGG | + | chr3_2:83357057-83357076 | Msa0431290:intron | 50.0% |
| !! | AGCTGCCGACTTTGTTACTG+TGG | + | chr3_2:83357166-83357185 | Msa0431290:CDS | 50.0% |
| AGAGTTCACAGAGACGAGCA+GGG | + | chr3_2:83357305-83357324 | Msa0431290:CDS | 50.0% | |
| GGTGACAATACGCAAGATGG+AGG | - | chr3_2:83357504-83357523 | None:intergenic | 50.0% | |
| CCTGGTGACAATACGCAAGA+TGG | - | chr3_2:83357507-83357526 | None:intergenic | 50.0% | |
| CCATCTTGCGTATTGTCACC+AGG | + | chr3_2:83357504-83357523 | Msa0431290:intron | 50.0% | |
| CCTGTAATCTCTCTGCGCTA+GGG | + | chr3_2:83357533-83357552 | Msa0431290:CDS | 50.0% | |
| CTGTAATCTCTCTGCGCTAG+GGG | + | chr3_2:83357534-83357553 | Msa0431290:CDS | 50.0% | |
| ATGGAGTAGATGCGGCATGT+AGG | + | chr3_2:83357652-83357671 | Msa0431290:three_prime_UTR | 50.0% | |
| TCGGAGAAGAGGTTCGTGGT+GGG | - | chr3_2:83349615-83349634 | None:intergenic | 55.0% | |
| GGGTTTGAACCAGAGAGGGT+CGG | - | chr3_2:83349634-83349653 | None:intergenic | 55.0% | |
| ! | GGTTCGGGTTTGAACCAGAG+AGG | - | chr3_2:83349639-83349658 | None:intergenic | 55.0% |
| TTAGGGGAGAGGAAGGGTTC+GGG | - | chr3_2:83349654-83349673 | None:intergenic | 55.0% | |
| GTTAGGGGAGAGGAAGGGTT+CGG | - | chr3_2:83349655-83349674 | None:intergenic | 55.0% | |
| CGGAATCGAAGTTAGGGGAG+AGG | - | chr3_2:83349665-83349684 | None:intergenic | 55.0% | |
| GGGAACGAAGGTTGGGAGTT+GGG | - | chr3_2:83349700-83349719 | None:intergenic | 55.0% | |
| TGTGGAGGGGAACGAAGGTT+GGG | - | chr3_2:83349707-83349726 | None:intergenic | 55.0% | |
| ! | TGTGAACGGAGAGTGTGGAG+GGG | - | chr3_2:83349720-83349739 | None:intergenic | 55.0% |
| ! | GTTGTGAACGGAGAGTGTGG+AGG | - | chr3_2:83349722-83349741 | None:intergenic | 55.0% |
| TCTCTCTCAGCTCGACAAGC+GGG | - | chr3_2:83349869-83349888 | None:intergenic | 55.0% | |
| TGCCTTTCATCTCACCCCGA+AGG | - | chr3_2:83350739-83350758 | None:intergenic | 55.0% | |
| ! | CGGGGTGAGATGAAAGGCAT+TGG | + | chr3_2:83350740-83350759 | Msa0431290:intron | 55.0% |
| ! | TGAAGCTTGGTGAGAGGCCA+AGG | + | chr3_2:83351122-83351141 | Msa0431290:intron | 55.0% |
| ! | GAAGCTTGGTGAGAGGCCAA+GGG | + | chr3_2:83351123-83351142 | Msa0431290:intron | 55.0% |
| ! | GCAGCTGATGATGACCCATG+TGG | - | chr3_2:83352199-83352218 | None:intergenic | 55.0% |
| GCTGCTGGATCATCTGAGGA+TGG | + | chr3_2:83352220-83352239 | Msa0431290:CDS | 55.0% | |
| AAGGAATGCCTCGGCAAGGA+CGG | - | chr3_2:83352412-83352431 | None:intergenic | 55.0% | |
| GACTAAGGAATGCCTCGGCA+AGG | - | chr3_2:83352416-83352435 | None:intergenic | 55.0% | |
| !! | CATAACACAAGCACCGGCAC+TGG | + | chr3_2:83353480-83353499 | Msa0431290:CDS | 55.0% |
| ! | CAAAGCAGTGGTGGAGTCTC+TGG | + | chr3_2:83353969-83353988 | Msa0431290:CDS | 55.0% |
| CATGGGGATGAGTGGGGAAA+AGG | - | chr3_2:83354622-83354641 | None:intergenic | 55.0% | |
| CCACTGCGTCCCATGGTTAT+CGG | - | chr3_2:83354669-83354688 | None:intergenic | 55.0% | |
| CGTATCCAGGACCCTAGGTA+AGG | + | chr3_2:83354689-83354708 | Msa0431290:intron | 55.0% | |
| ATCCAGGACCCTAGGTAAGG+GGG | + | chr3_2:83354692-83354711 | Msa0431290:intron | 55.0% | |
| GGCGGATCTACACTTGGTTG+AGG | - | chr3_2:83355760-83355779 | None:intergenic | 55.0% | |
| ATCAGGGGCGGATCTACACT+TGG | - | chr3_2:83355766-83355785 | None:intergenic | 55.0% | |
| AAGTGTAGATCCGCCCCTGA+TGG | + | chr3_2:83355765-83355784 | Msa0431290:intron | 55.0% | |
| AGTGTAGATCCGCCCCTGAT+GGG | + | chr3_2:83355766-83355785 | Msa0431290:intron | 55.0% | |
| TTAAACCGTCCCATCAGGGG+CGG | - | chr3_2:83355778-83355797 | None:intergenic | 55.0% | |
| !! | GACATGCAGGCGTTTTTGGG+TGG | + | chr3_2:83357056-83357075 | Msa0431290:intron | 55.0% |
| !!! | CATGCAGGCGTTTTTGGGTG+GGG | + | chr3_2:83357058-83357077 | Msa0431290:intron | 55.0% |
| CAGAGTTCACAGAGACGAGC+AGG | + | chr3_2:83357304-83357323 | Msa0431290:CDS | 55.0% | |
| GAGTTCACAGAGACGAGCAG+GGG | + | chr3_2:83357306-83357325 | Msa0431290:CDS | 55.0% | |
| GCCTGTAATCTCTCTGCGCT+AGG | + | chr3_2:83357532-83357551 | Msa0431290:CDS | 55.0% | |
| CCCTAGCGCAGAGAGATTAC+AGG | - | chr3_2:83357536-83357555 | None:intergenic | 55.0% | |
| GTCGGAGAAGAGGTTCGTGG+TGG | - | chr3_2:83349616-83349635 | None:intergenic | 60.0% | |
| AGGGTCGGAGAAGAGGTTCG+TGG | - | chr3_2:83349619-83349638 | None:intergenic | 60.0% | |
| ACCTCTTCTCCGACCCTCTC+TGG | + | chr3_2:83349622-83349641 | Msa0431290:CDS | 60.0% | |
| ACCAGAGAGGGTCGGAGAAG+AGG | - | chr3_2:83349626-83349645 | None:intergenic | 60.0% | |
| GGGGAACGAAGGTTGGGAGT+TGG | - | chr3_2:83349701-83349720 | None:intergenic | 60.0% | |
| GTGTGGAGGGGAACGAAGGT+TGG | - | chr3_2:83349708-83349727 | None:intergenic | 60.0% | |
| ! | GAGAGTGTGGAGGGGAACGA+AGG | - | chr3_2:83349712-83349731 | None:intergenic | 60.0% |
| CTCTCTCAGCTCGACAAGCG+GGG | - | chr3_2:83349868-83349887 | None:intergenic | 60.0% | |
| TCATCATCAGCTGCGGCTGC+TGG | + | chr3_2:83352205-83352224 | Msa0431290:CDS | 60.0% | |
| TGCGGCTGCTGGATCATCTG+AGG | + | chr3_2:83352216-83352235 | Msa0431290:CDS | 60.0% | |
| AACCATGTCCGTCCTTGCCG+AGG | + | chr3_2:83352401-83352420 | Msa0431290:intron | 60.0% | |
| ! | GGACGGACAGTAGCCTTGCA+TGG | - | chr3_2:83352941-83352960 | None:intergenic | 60.0% |
| GAAGCTGCAAGGAGAGGCGA+AGG | - | chr3_2:83353328-83353347 | None:intergenic | 60.0% | |
| ! | AGCAGTGGTGGAGTCTCTGG+TGG | + | chr3_2:83353972-83353991 | Msa0431290:CDS | 60.0% |
| CTCGTGCATGGGGATGAGTG+GGG | - | chr3_2:83354628-83354647 | None:intergenic | 60.0% | |
| CCTCGTGCATGGGGATGAGT+GGG | - | chr3_2:83354629-83354648 | None:intergenic | 60.0% | |
| CCGATAACCATGGGACGCAG+TGG | + | chr3_2:83354666-83354685 | Msa0431290:intron | 60.0% | |
| AGTGGCGTATCCAGGACCCT+AGG | + | chr3_2:83354684-83354703 | Msa0431290:intron | 60.0% | |
| TAGATCCGCCCCTGATGGGA+CGG | + | chr3_2:83355770-83355789 | Msa0431290:intron | 60.0% | |
| AGACGAGCAGGGGCAAGTTC+AGG | + | chr3_2:83357316-83357335 | Msa0431290:CDS | 60.0% | |
| TCTCTCTGCGCTAGGGGTTG+AGG | + | chr3_2:83357540-83357559 | Msa0431290:CDS | 60.0% | |
| TGCCTCGGCAAGGACGGACA+TGG | - | chr3_2:83352406-83352425 | None:intergenic | 65.0% | |
| ATCCCATCCACGCCCAGTGC+CGG | - | chr3_2:83353496-83353515 | None:intergenic | 65.0% | |
| CCCACTCATCCCCATGCACG+AGG | + | chr3_2:83354626-83354645 | Msa0431290:intron | 65.0% | |
| GCCTCGTGCATGGGGATGAG+TGG | - | chr3_2:83354630-83354649 | None:intergenic | 65.0% | |
| GGATACGCCACTGCGTCCCA+TGG | - | chr3_2:83354676-83354695 | None:intergenic | 65.0% | |
| TGGGACGCAGTGGCGTATCC+AGG | + | chr3_2:83354676-83354695 | Msa0431290:intron | 65.0% | |
| CACCCCCTTACCTAGGGTCC+TGG | - | chr3_2:83354697-83354716 | None:intergenic | 65.0% | |
| !! | ACAAGCACCGGCACTGGGCG+TGG | + | chr3_2:83353486-83353505 | Msa0431290:CDS | 70.0% |
| ! | CACCGGCACTGGGCGTGGAT+GGG | + | chr3_2:83353491-83353510 | Msa0431290:CDS | 70.0% |
| GGGTGTGCACCTGCACACCC+TGG | - | chr3_2:83355739-83355758 | None:intergenic | 70.0% | |
| ! | GCACCGGCACTGGGCGTGGA+TGG | + | chr3_2:83353490-83353509 | Msa0431290:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 83349471 | 83357837 | 83349471 | ID=Msa0431290;Name=Msa0431290 |
| chr3_2 | mRNA | 83349471 | 83357837 | 83349471 | ID=Msa0431290-mRNA-1;Parent=Msa0431290;Name=Msa0431290-mRNA-1;_AED=0.18;_eAED=0.18;_QI=111|0.84|0.92|0.92|0.92|0.92|14|181|789 |
| chr3_2 | exon | 83349471 | 83350022 | 83349471 | ID=Msa0431290-mRNA-1:exon:23234;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83350787 | 83350993 | 83350787 | ID=Msa0431290-mRNA-1:exon:23235;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83351352 | 83351463 | 83351352 | ID=Msa0431290-mRNA-1:exon:23236;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83351975 | 83352319 | 83351975 | ID=Msa0431290-mRNA-1:exon:23237;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83352596 | 83352754 | 83352596 | ID=Msa0431290-mRNA-1:exon:23238;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83352947 | 83353052 | 83352947 | ID=Msa0431290-mRNA-1:exon:23239;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83353139 | 83353354 | 83353139 | ID=Msa0431290-mRNA-1:exon:23240;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83353437 | 83353545 | 83353437 | ID=Msa0431290-mRNA-1:exon:23241;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83353808 | 83354008 | 83353808 | ID=Msa0431290-mRNA-1:exon:23242;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83354170 | 83354274 | 83354170 | ID=Msa0431290-mRNA-1:exon:23243;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83357065 | 83357187 | 83357065 | ID=Msa0431290-mRNA-1:exon:23244;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83357268 | 83357402 | 83357268 | ID=Msa0431290-mRNA-1:exon:23245;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83357526 | 83357778 | 83357526 | ID=Msa0431290-mRNA-1:exon:23246;Parent=Msa0431290-mRNA-1 |
| chr3_2 | exon | 83357799 | 83357837 | 83357799 | ID=Msa0431290-mRNA-1:exon:23247;Parent=Msa0431290-mRNA-1 |
| chr3_2 | five_prime_UTR | 83349471 | 83349581 | 83349471 | ID=Msa0431290-mRNA-1:five_prime_utr;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83349582 | 83350022 | 83349582 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83350787 | 83350993 | 83350787 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83351352 | 83351463 | 83351352 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83351975 | 83352319 | 83351975 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83352596 | 83352754 | 83352596 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83352947 | 83353052 | 83352947 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83353139 | 83353354 | 83353139 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83353437 | 83353545 | 83353437 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83353808 | 83354008 | 83353808 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83354170 | 83354274 | 83354170 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83357065 | 83357187 | 83357065 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83357268 | 83357402 | 83357268 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | CDS | 83357526 | 83357636 | 83357526 | ID=Msa0431290-mRNA-1:cds;Parent=Msa0431290-mRNA-1 |
| chr3_2 | three_prime_UTR | 83357637 | 83357778 | 83357637 | ID=Msa0431290-mRNA-1:three_prime_utr;Parent=Msa0431290-mRNA-1 |
| chr3_2 | three_prime_UTR | 83357799 | 83357837 | 83357799 | ID=Msa0431290-mRNA-1:three_prime_utr;Parent=Msa0431290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
