Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476580 | GAU44978.1 | 83.526 | 777 | 95 | 7 | 1 | 770 | 1 | 751 | 0.0 | 1256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476580 | sp|F4JRR1|COG2_ARATH | 61.518 | 764 | 259 | 9 | 13 | 769 | 19 | 754 | 0.0 | 919 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476580 | A0A2Z6NKF6 | 83.526 | 777 | 95 | 7 | 1 | 770 | 1 | 751 | 0.0 | 1256 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0064800 | Msa0476580 | 0.819908 | 9.072379e-53 | -8.615850e-47 |
| Msa0156130 | Msa0476580 | 0.824294 | 8.724097e-54 | -8.615850e-47 |
| Msa0188900 | Msa0476580 | 0.805146 | 1.537037e-49 | -8.615850e-47 |
| Msa0218370 | Msa0476580 | 0.810502 | 1.116490e-50 | -8.615850e-47 |
| Msa0231370 | Msa0476580 | 0.818711 | 1.699476e-52 | -8.615850e-47 |
| Msa0431290 | Msa0476580 | 0.846092 | 2.698706e-59 | -8.615850e-47 |
| Msa0476580 | Msa0681250 | 0.804273 | 2.338283e-49 | -8.615850e-47 |
| Msa0476580 | Msa0693010 | -0.807126 | 5.887225e-50 | -8.615850e-47 |
| Msa0476580 | Msa0790600 | 0.824695 | 7.021989e-54 | -8.615850e-47 |
| Msa0476580 | Msa0901930 | 0.818190 | 2.230965e-52 | -8.615850e-47 |
| Msa0476580 | Msa0939140 | 0.808749 | 2.657950e-50 | -8.615850e-47 |
| Msa0476580 | Msa1001180 | 0.801122 | 1.045035e-48 | -8.615850e-47 |
| Msa0476580 | Msa1312520 | 0.803704 | 3.070778e-49 | -8.615850e-47 |
| Msa0476580 | Msa1403480 | 0.822613 | 2.156951e-53 | -8.615850e-47 |
| Msa0476580 | Msa1443060 | 0.802117 | 6.533188e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476580 | MtrunA17_Chr4g0057621 | 83.355 | 775 | 100 | 5 | 1 | 769 | 1 | 752 | 0.0 | 1247 |
| Msa0476580 | MtrunA17_Chr3g0136251 | 80.473 | 169 | 12 | 2 | 202 | 370 | 24 | 171 | 3.63e-85 | 268 |
| Msa0476580 | MtrunA17_Chr3g0136241 | 93.525 | 139 | 9 | 0 | 566 | 704 | 1 | 139 | 3.86e-82 | 258 |
| Msa0476580 | MtrunA17_Chr3g0136261 | 96.386 | 83 | 3 | 0 | 1 | 83 | 1 | 83 | 5.84e-50 | 170 |
| Msa0476580 | MtrunA17_Chr3g0136231 | 89.130 | 46 | 5 | 0 | 725 | 770 | 1 | 46 | 5.40e-20 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476580 | AT4G24840.1 | 61.518 | 764 | 259 | 9 | 13 | 769 | 19 | 754 | 0.0 | 919 |
Find 187 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAATGAGTTGGTGATTT+AGG | 0.076058 | 3_3:+80422696 | None:intergenic |
| ATCGATATCACATACCTTTA+AGG | 0.095937 | 3_3:+80418198 | None:intergenic |
| CGTCAATTGCCTTAGGTTTC+AGG | 0.127249 | 3_3:-80419342 | Msa0476580:intron |
| TCTCCTTGCAGCTTCTTTCT+AGG | 0.188026 | 3_3:-80419133 | Msa0476580:intron |
| CAAATCAAGCTTGGAGTTCT+TGG | 0.214006 | 3_3:-80419746 | Msa0476580:CDS |
| ATAATAAGAGTTTGCATCTA+TGG | 0.216112 | 3_3:-80415928 | Msa0476580:exon |
| TGGAGTATTACGTCCCTTAA+AGG | 0.243370 | 3_3:-80418212 | Msa0476580:intron |
| TAGCTTTGACTGTAGTTGTT+AGG | 0.255960 | 3_3:-80421072 | Msa0476580:intron |
| TTCAAGAACTCTGGTCTTCC+AGG | 0.261973 | 3_3:+80419775 | None:intergenic |
| GCAGCTGTTCCTTGATATTC+AGG | 0.267425 | 3_3:-80416193 | Msa0476580:intron |
| CTTACTGATTCAAGGACATT+AGG | 0.281694 | 3_3:+80418574 | None:intergenic |
| AAATAGTTATCAATTAATTA+AGG | 0.283591 | 3_3:-80420217 | Msa0476580:CDS |
| TGGGGAGAAAATCTCATATT+TGG | 0.291174 | 3_3:-80416498 | Msa0476580:CDS |
| TTTACACGTCTTTGACTTCT+TGG | 0.292008 | 3_3:-80419860 | Msa0476580:CDS |
| TTCTCCATATTCTCAATAAA+AGG | 0.292427 | 3_3:+80420480 | None:intergenic |
| GAACTTACAGATACTCAAAT+TGG | 0.296371 | 3_3:-80419039 | Msa0476580:intron |
| GGGAACGAAGGTTGGGAGTT+GGG | 0.304589 | 3_3:+80422760 | None:intergenic |
| TTGCATCCTATGGTTCATTA+TGG | 0.310668 | 3_3:-80415989 | Msa0476580:CDS |
| TTTGTGTATTATATATTTCA+TGG | 0.318463 | 3_3:+80415842 | None:intergenic |
| ATGAATGAGTTGGTGATTTA+GGG | 0.319099 | 3_3:+80422697 | None:intergenic |
| ACATATGGTGATTGCCTAAC+AGG | 0.320806 | 3_3:+80418238 | None:intergenic |
| GAGAATGATCGAAACCGTTT+TGG | 0.323878 | 3_3:+80422929 | None:intergenic |
| GCATTTGGTGCAGAAAATTC+AGG | 0.330790 | 3_3:-80419883 | Msa0476580:intron |
| CCAAGCTTGCATCTACTAAT+AGG | 0.332448 | 3_3:+80420439 | None:intergenic |
| TTAGGGGAGAGGAAGGGTTC+GGG | 0.334672 | 3_3:+80422806 | None:intergenic |
| ACTGTAGTTGTTAGGGTCAA+TGG | 0.344266 | 3_3:-80421064 | Msa0476580:intron |
| TCATCATCAGCTGCGGCTGC+TGG | 0.345549 | 3_3:-80420261 | Msa0476580:CDS |
| TATTCATGATATAAGATGTT+TGG | 0.353453 | 3_3:-80418656 | Msa0476580:CDS |
| TCGATATCACATACCTTTAA+GGG | 0.363255 | 3_3:+80418199 | None:intergenic |
| TATGATTCGGAATCGAAGTT+AGG | 0.364116 | 3_3:+80422788 | None:intergenic |
| GAGTTCTTGGCTTATCTAGA+AGG | 0.365781 | 3_3:-80419733 | Msa0476580:intron |
| TATATAATACACAAATTAGT+TGG | 0.371205 | 3_3:-80415834 | Msa0476580:three_prime_UTR |
| GACATAATTTCTAACAATAA+TGG | 0.371733 | 3_3:-80422894 | Msa0476580:exon |
| TTACTGATTCAAGGACATTA+GGG | 0.375922 | 3_3:+80418575 | None:intergenic |
| GTTAGAAATTATGTCGAGAT+TGG | 0.379816 | 3_3:+80422902 | None:intergenic |
| CAAAGCAGTGGTGGAGTCTC+TGG | 0.381245 | 3_3:-80418497 | Msa0476580:CDS |
| GTTAGGGGAGAGGAAGGGTT+CGG | 0.389283 | 3_3:+80422805 | None:intergenic |
| AGTTCATGAAGCAATGGAAT+TGG | 0.400219 | 3_3:-80419462 | Msa0476580:CDS |
| AAATTTAGCAACAGCAGATC+TGG | 0.402378 | 3_3:+80419507 | None:intergenic |
| TTATTGGATATTTCTTCTGC+TGG | 0.408003 | 3_3:-80420168 | Msa0476580:intron |
| AGACGAGCAGGGGCAAGTTC+AGG | 0.408995 | 3_3:-80416258 | Msa0476580:CDS |
| GCACCGGCACTGGGCGTGGA+TGG | 0.410025 | 3_3:-80418976 | Msa0476580:CDS |
| AGCTTTGACTGTAGTTGTTA+GGG | 0.410934 | 3_3:-80421071 | Msa0476580:intron |
| TAAAGGTTCAAAGGATTTCA+AGG | 0.412758 | 3_3:+80418525 | None:intergenic |
| TGCTCTGCCTTACTGATTCA+AGG | 0.414153 | 3_3:+80418566 | None:intergenic |
| ACCTCTTCTCCGACCCTCTC+TGG | 0.414416 | 3_3:-80422835 | Msa0476580:CDS |
| AGAAAAGTTCGTTGAGCAAT+GGG | 0.415511 | 3_3:-80421616 | Msa0476580:CDS |
| TTGGGACATTGCTTTGTAGA+TGG | 0.416385 | 3_3:-80420420 | Msa0476580:CDS |
| CTAATAAGCCTCTACCTGTT+AGG | 0.417673 | 3_3:-80418252 | Msa0476580:CDS |
| TAGCAAAGAGAACCTCTCTA+AGG | 0.419095 | 3_3:+80419827 | None:intergenic |
| ATTGTGTTCTGCTTATCTGC+TGG | 0.421008 | 3_3:+80415954 | None:intergenic |
| CCCTAGCGCAGAGAGATTAC+AGG | 0.427469 | 3_3:+80416028 | None:intergenic |
| GCTGCTGGATCATCTGAGGA+TGG | 0.430629 | 3_3:-80420246 | Msa0476580:CDS |
| ACAAGCACCGGCACTGGGCG+TGG | 0.439906 | 3_3:-80418980 | Msa0476580:CDS |
| GCAGGTGGAGAAACTAATAA+AGG | 0.442254 | 3_3:-80421690 | Msa0476580:intron |
| GTGTGGAAGGGAACGAAGGT+TGG | 0.442817 | 3_3:+80422752 | None:intergenic |
| GGGATAATCTTCTGCATCAA+TGG | 0.451323 | 3_3:+80420291 | None:intergenic |
| AGGGAACGAAGGTTGGGAGT+TGG | 0.452499 | 3_3:+80422759 | None:intergenic |
| TTACTTACAACACGTGGTTC+AGG | 0.453410 | 3_3:-80418614 | Msa0476580:CDS |
| TCTCTCTGCGCTAGGGGTTG+AGG | 0.454562 | 3_3:-80416021 | Msa0476580:CDS |
| TTGAGAACGGAGAGTGTGGA+AGG | 0.457996 | 3_3:+80422739 | None:intergenic |
| GAATTGCCAGTGAGATGAAC+CGG | 0.462260 | 3_3:-80421529 | Msa0476580:CDS |
| CTTAGGTTTCAGGAAATAGC+AGG | 0.463103 | 3_3:-80419332 | Msa0476580:intron |
| TGTGGAAGGGAACGAAGGTT+GGG | 0.466110 | 3_3:+80422753 | None:intergenic |
| AACCTCTCTAAGGATTGAAT+TGG | 0.466396 | 3_3:+80419837 | None:intergenic |
| ATGATTCGGAATCGAAGTTA+GGG | 0.466454 | 3_3:+80422789 | None:intergenic |
| CCCGTTCAAAATTTAGATCC+TGG | 0.468135 | 3_3:-80419272 | Msa0476580:CDS |
| AAACCTAGTTCAATGTAGAC+TGG | 0.470116 | 3_3:+80422988 | None:intergenic |
| TGCTTCCGCTAGAGAGACTT+TGG | 0.471083 | 3_3:-80422492 | Msa0476580:CDS |
| GCCTGTAATCTCTCTGCGCT+AGG | 0.471729 | 3_3:-80416029 | Msa0476580:CDS |
| ACCACTGCTTTGATGACTAA+AGG | 0.473079 | 3_3:+80418508 | None:intergenic |
| TTCGTTTCATCTTGTTTCCA+AGG | 0.475250 | 3_3:-80422456 | Msa0476580:intron |
| AGAGACTCAAAGCATGCTGC+TGG | 0.477659 | 3_3:-80421555 | Msa0476580:CDS |
| CCTATTAGTAGATGCAAGCT+TGG | 0.478333 | 3_3:-80420439 | Msa0476580:CDS |
| ATCCCATCCACGCCCAGTGC+CGG | 0.479639 | 3_3:+80418973 | None:intergenic |
| TCTTGATAATTTGCTTCGCC+AGG | 0.482279 | 3_3:+80419254 | None:intergenic |
| ATAGACTCCGACTGGTCAAA+TGG | 0.486421 | 3_3:-80421656 | Msa0476580:CDS |
| TGTCTCTCAGCTCGACAAGC+GGG | 0.488601 | 3_3:+80422591 | None:intergenic |
| AGGCAATCACCATATGTTGC+TGG | 0.491749 | 3_3:-80418232 | Msa0476580:CDS |
| GCAGTCAATATTGCATCCTA+TGG | 0.492855 | 3_3:-80415999 | Msa0476580:CDS |
| CCTGTAATCTCTCTGCGCTA+GGG | 0.493651 | 3_3:-80416028 | Msa0476580:CDS |
| CATAACACAAGCACCGGCAC+TGG | 0.493980 | 3_3:-80418986 | Msa0476580:CDS |
| CACCGGCACTGGGCGTGGAT+GGG | 0.495300 | 3_3:-80418975 | Msa0476580:CDS |
| TTTGATGACTAAAGGTTCAA+AGG | 0.495401 | 3_3:+80418516 | None:intergenic |
| TTGTAGATGGTCTAAAACAC+CGG | 0.495701 | 3_3:-80420407 | Msa0476580:CDS |
| ACTGTGCAACATGTCGAGAA+TGG | 0.496287 | 3_3:-80421590 | Msa0476580:CDS |
| CAGAGTGCGAAAGTCTAGAA+AGG | 0.498468 | 3_3:-80421037 | Msa0476580:CDS |
| CACTCCCTCAACATCCAAAA+CGG | 0.500946 | 3_3:-80422943 | Msa0476580:five_prime_UTR |
| CTGTGCAACATGTCGAGAAT+GGG | 0.501153 | 3_3:-80421589 | Msa0476580:CDS |
| AAAACAAAGTGTAACTCTGT+TGG | 0.501400 | 3_3:-80419222 | Msa0476580:CDS |
| CGTAATACTCCAGCAACATA+TGG | 0.505695 | 3_3:+80418223 | None:intergenic |
| ATTCTATGTTACACATGCAA+AGG | 0.505855 | 3_3:-80421501 | Msa0476580:intron |
| TGGAGAGTTTGAGATTGTGC+TGG | 0.507140 | 3_3:-80419202 | Msa0476580:CDS |
| CAGAGTTCACTGAGACGAGC+AGG | 0.510853 | 3_3:-80416270 | Msa0476580:CDS |
| TCATGATATAAGATGTTTGG+AGG | 0.514413 | 3_3:-80418653 | Msa0476580:CDS |
| TTCCCAGTCTACATTGAACT+AGG | 0.515411 | 3_3:-80422991 | Msa0476580:five_prime_UTR |
| CTGCTGGATCATCTGAGGAT+GGG | 0.515950 | 3_3:-80420245 | Msa0476580:CDS |
| GAGTTGGGAGATGTATGATT+CGG | 0.518789 | 3_3:+80422775 | None:intergenic |
| CCAGGACTTGAGACAGATGA+AGG | 0.520985 | 3_3:-80418299 | Msa0476580:intron |
| ATCGAAGTTAGGGGAGAGGA+AGG | 0.523013 | 3_3:+80422799 | None:intergenic |
| GTTGGTGATTTAGGGATGAA+AGG | 0.523643 | 3_3:+80422705 | None:intergenic |
| GGTTCTCTTTGCTATTCAGA+AGG | 0.526000 | 3_3:-80419818 | Msa0476580:CDS |
| GGAATTTGTCGGAACAAGAA+AGG | 0.527333 | 3_3:+80419162 | None:intergenic |
| GGTAGTTGTTGAGTTGAGAA+CGG | 0.529631 | 3_3:+80422726 | None:intergenic |
| CCATATTCTCAATAAAAGGC+AGG | 0.533344 | 3_3:+80420484 | None:intergenic |
| ACCAGAGAGGGTCGGAGAAG+AGG | 0.533965 | 3_3:+80422834 | None:intergenic |
| GTCGAGAATGGGACAAGTCT+CGG | 0.536569 | 3_3:-80421578 | Msa0476580:CDS |
| TGTAAATTGCAGTTGCATCC+CGG | 0.537246 | 3_3:+80420388 | None:intergenic |
| GGAGAGGCGAAGGAATTTGT+CGG | 0.538155 | 3_3:+80419151 | None:intergenic |
| CTAATGTCCTTGAATCAGTA+AGG | 0.539249 | 3_3:-80418573 | Msa0476580:CDS |
| GAGAAAAGTTCGTTGAGCAA+TGG | 0.540915 | 3_3:-80421617 | Msa0476580:CDS |
| CTATTAGTAGATGCAAGCTT+GGG | 0.542829 | 3_3:-80420438 | Msa0476580:CDS |
| GGTCTGTGATGCGCTAGTAT+AGG | 0.543844 | 3_3:+80422866 | None:intergenic |
| TGAGTTGAGAACGGAGAGTG+TGG | 0.544851 | 3_3:+80422735 | None:intergenic |
| ATTCCATTGCTTCATGAACT+CGG | 0.547173 | 3_3:+80419465 | None:intergenic |
| AAATGGAGATGTGAATTTGT+CGG | 0.550788 | 3_3:-80421639 | Msa0476580:CDS |
| CACATCTCCATTTGACCAGT+CGG | 0.552640 | 3_3:+80421649 | None:intergenic |
| GAAGCTGCAAGGAGAGGCGA+AGG | 0.554994 | 3_3:+80419141 | None:intergenic |
| ATCCACATCAACAATGTTAG+CGG | 0.556712 | 3_3:+80422637 | None:intergenic |
| CTTCCAGGAGAAAATGCACC+TGG | 0.557252 | 3_3:+80419790 | None:intergenic |
| CGGAATCGAAGTTAGGGGAG+AGG | 0.558059 | 3_3:+80422795 | None:intergenic |
| GTTCTCTTTGCTATTCAGAA+GGG | 0.558787 | 3_3:-80419817 | Msa0476580:CDS |
| TTGGTTACGAGTAGTCAAGA+AGG | 0.561008 | 3_3:-80416320 | Msa0476580:intron |
| AACCTAGTTCAATGTAGACT+GGG | 0.565317 | 3_3:+80422989 | None:intergenic |
| AGGTTGATTGCTTTCTTGTG+TGG | 0.565689 | 3_3:-80415889 | Msa0476580:three_prime_UTR |
| TTATTGAGAATATGGAGAAG+AGG | 0.569360 | 3_3:-80420476 | Msa0476580:CDS |
| GGCCAATTCAATCCTTAGAG+AGG | 0.570620 | 3_3:-80419839 | Msa0476580:CDS |
| GACCAGTCGGAGTCTATACT+AGG | 0.574201 | 3_3:+80421662 | None:intergenic |
| GGTGATTGCCTAACAGGTAG+AGG | 0.576101 | 3_3:+80418244 | None:intergenic |
| ATAACACAAGCACCGGCACT+GGG | 0.577289 | 3_3:-80418985 | Msa0476580:CDS |
| AGAGTGCGAAAGTCTAGAAA+GGG | 0.581125 | 3_3:-80421036 | Msa0476580:CDS |
| TCATGCCTACCTGAATATCA+AGG | 0.583005 | 3_3:+80416184 | None:intergenic |
| CAGGACTTGAGACAGATGAA+GGG | 0.586371 | 3_3:-80418298 | Msa0476580:CDS |
| GTCGGAGAAGAGGTTCGTGG+TGG | 0.589026 | 3_3:+80422844 | None:intergenic |
| TGCCTAGTATAGACTCCGAC+TGG | 0.595569 | 3_3:-80421664 | Msa0476580:CDS |
| TCGGAGAAGAGGTTCGTGGT+GGG | 0.596064 | 3_3:+80422845 | None:intergenic |
| ACACTGCCATAATGAACCAT+AGG | 0.598998 | 3_3:+80415983 | None:intergenic |
| AAGAGTCATAACACAAGCAC+CGG | 0.599229 | 3_3:-80418992 | Msa0476580:CDS |
| TACCGCTAACATTGTTGATG+TGG | 0.601688 | 3_3:-80422639 | Msa0476580:CDS |
| GCTATTCAGAAGGGAAAACC+AGG | 0.602778 | 3_3:-80419808 | Msa0476580:CDS |
| ACCTTTAGTCATCAAAGCAG+TGG | 0.602878 | 3_3:-80418509 | Msa0476580:CDS |
| AGAGTTCACTGAGACGAGCA+GGG | 0.603353 | 3_3:-80416269 | Msa0476580:CDS |
| CTGTAATCTCTCTGCGCTAG+GGG | 0.606581 | 3_3:-80416027 | Msa0476580:CDS |
| TGCGGCTGCTGGATCATCTG+AGG | 0.607010 | 3_3:-80420250 | Msa0476580:CDS |
| ATACCGAGTTCATGAAGCAA+TGG | 0.612967 | 3_3:-80419468 | Msa0476580:CDS |
| GATGTTTCAGATGTCATAGA+TGG | 0.615823 | 3_3:-80418953 | Msa0476580:CDS |
| ATGGAGTAGATGCGGCATGT+AGG | 0.616473 | 3_3:-80415909 | Msa0476580:three_prime_UTR |
| ACATGGGTCATCATCAGCTG+CGG | 0.618549 | 3_3:-80420268 | Msa0476580:CDS |
| TAGAAAGAAGCTGCAAGGAG+AGG | 0.618992 | 3_3:+80419135 | None:intergenic |
| AGGGTCGGAGAAGAGGTTCG+TGG | 0.623171 | 3_3:+80422841 | None:intergenic |
| GGGTTTGAACCAGAGAGGGT+CGG | 0.628996 | 3_3:+80422826 | None:intergenic |
| ATGCAGAAGATTATCCCACA+TGG | 0.629081 | 3_3:-80420285 | Msa0476580:CDS |
| TACTGATTCAAGGACATTAG+GGG | 0.630300 | 3_3:+80418576 | None:intergenic |
| GTCTCTCAGCTCGACAAGCG+GGG | 0.631381 | 3_3:+80422592 | None:intergenic |
| TGTCATCTGTACTGACTGCA+TGG | 0.631708 | 3_3:-80419015 | Msa0476580:CDS |
| GGATTCTTACCACAGTAACA+AGG | 0.633120 | 3_3:+80416399 | None:intergenic |
| AGCTGCCGACCTTGTTACTG+TGG | 0.636303 | 3_3:-80416408 | Msa0476580:intron |
| AGCAGTGGTGGAGTCTCTGG+TGG | 0.638337 | 3_3:-80418494 | Msa0476580:CDS |
| AGGACTTGAGACAGATGAAG+GGG | 0.638861 | 3_3:-80418297 | Msa0476580:CDS |
| CAGCTGCATACGCATTCTGT+CGG | 0.640101 | 3_3:+80416209 | None:intergenic |
| TGTAGATGGTCTAAAACACC+GGG | 0.640649 | 3_3:-80420406 | Msa0476580:CDS |
| TGTTTGGAGGATCATGTTCG+TGG | 0.641392 | 3_3:-80418640 | Msa0476580:CDS |
| TTGTCTCTCAGCTCGACAAG+CGG | 0.644020 | 3_3:+80422590 | None:intergenic |
| GTTCGGGTTTGAACCAGAGA+GGG | 0.644202 | 3_3:+80422822 | None:intergenic |
| TGACCTAGAAAGAAGCTGCA+AGG | 0.644476 | 3_3:+80419130 | None:intergenic |
| TTAGGTTTCAGGAAATAGCA+GGG | 0.645940 | 3_3:-80419331 | Msa0476580:intron |
| TAATCTCAGTTGCAGCACAA+AGG | 0.648567 | 3_3:+80416450 | None:intergenic |
| TGGTTCATTATGGCAGTGTG+TGG | 0.649208 | 3_3:-80415979 | Msa0476580:CDS |
| TGAGAACGGAGAGTGTGGAA+GGG | 0.655240 | 3_3:+80422740 | None:intergenic |
| TGGTGATTACTTACAACACG+TGG | 0.655831 | 3_3:-80418620 | Msa0476580:CDS |
| ATAATTTCTAACAATAATGG+CGG | 0.658953 | 3_3:-80422891 | Msa0476580:exon |
| TTTAGTCATCAAAGCAGTGG+TGG | 0.660509 | 3_3:-80418506 | Msa0476580:CDS |
| GATTGATAAGATGAATGAGT+TGG | 0.664025 | 3_3:+80422687 | None:intergenic |
| GAGTTCACTGAGACGAGCAG+GGG | 0.668180 | 3_3:-80416268 | Msa0476580:CDS |
| TTGCATCTATGGAGTAGATG+CGG | 0.670743 | 3_3:-80415917 | Msa0476580:three_prime_UTR |
| TCGAAGTTAGGGGAGAGGAA+GGG | 0.673297 | 3_3:+80422800 | None:intergenic |
| TGCAGAAGATTATCCCACAT+GGG | 0.676518 | 3_3:-80420284 | Msa0476580:CDS |
| GGTTCGGGTTTGAACCAGAG+AGG | 0.679460 | 3_3:+80422821 | None:intergenic |
| AAGCTCCAAAGTCTCTCTAG+CGG | 0.680122 | 3_3:+80422487 | None:intergenic |
| TGTTGATGTGGATGACGCTG+TGG | 0.682456 | 3_3:-80422627 | Msa0476580:CDS |
| GAGAGTGTGGAAGGGAACGA+AGG | 0.683301 | 3_3:+80422748 | None:intergenic |
| TTAGCAACAGCAGATCTGGA+CGG | 0.689389 | 3_3:+80419511 | None:intergenic |
| TGATTCGGAATCGAAGTTAG+GGG | 0.691586 | 3_3:+80422790 | None:intergenic |
| TCTTACCACAGTAACAAGGT+CGG | 0.691696 | 3_3:+80416403 | None:intergenic |
| CAGCTGATGATGACCCATGT+GGG | 0.694446 | 3_3:+80420271 | None:intergenic |
| GAAAAGTTCGTTGAGCAATG+GGG | 0.695654 | 3_3:-80421615 | Msa0476580:CDS |
| GCAGCTGATGATGACCCATG+TGG | 0.752023 | 3_3:+80420270 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATTATAATAAATAAAA+AGG | - | chr3_3:80417975-80417994 | Msa0476580:intron | 0.0% |
| !! | TTTATTATAATAAATAAAAA+GGG | - | chr3_3:80417976-80417995 | Msa0476580:intron | 0.0% |
| !!! | AACAAATTTTATAAATTAGT+TGG | - | chr3_3:80417318-80417337 | Msa0476580:intron | 10.0% |
| !! | TTTATTCAATAAATAATCAA+AGG | + | chr3_3:80417772-80417791 | None:intergenic | 10.0% |
| !! | AAATAGTTATCAATTAATTA+AGG | - | chr3_3:80418515-80418534 | Msa0476580:CDS | 10.0% |
| !! | ATAATTTATTACTAATATAG+GGG | + | chr3_3:80420808-80420827 | None:intergenic | 10.0% |
| !! | AAATTATTTATTGAATAACA+AGG | - | chr3_3:80421338-80421357 | Msa0476580:intron | 10.0% |
| !! | AATTATTTATTGAATAACAA+GGG | - | chr3_3:80421339-80421358 | Msa0476580:intron | 10.0% |
| !!! | TAATTTTTCTCTTTAAAAAA+AGG | - | chr3_3:80421422-80421441 | Msa0476580:intron | 10.0% |
| !!! | AGTTTTTTTTTTTTTTTTGA+AGG | - | chr3_3:80422951-80422970 | Msa0476580:five_prime_UTR | 10.0% |
| !!! | TTCTTTTTTTTTTTGATAGA+AGG | - | chr3_3:80416718-80416737 | Msa0476580:intron | 15.0% |
| !! | GATTATTTATTGAATAAACT+TGG | - | chr3_3:80417774-80417793 | Msa0476580:intron | 15.0% |
| !! | CTTTAGATATGTAAATATAA+TGG | + | chr3_3:80418825-80418844 | None:intergenic | 15.0% |
| !!! | ATATTTACATATCTAAAGTT+TGG | - | chr3_3:80418827-80418846 | Msa0476580:intron | 15.0% |
| !!! | AGAAAATTGTTATTTTATCA+TGG | + | chr3_3:80419976-80419995 | None:intergenic | 15.0% |
| !! | ACAATGTTTATTCATTAAAT+TGG | - | chr3_3:80420289-80420308 | Msa0476580:CDS | 15.0% |
| !! | TAATTTATTACTAATATAGG+GGG | + | chr3_3:80420807-80420826 | None:intergenic | 15.0% |
| !!! | AAATGCTTTTAGTTAAATTT+TGG | - | chr3_3:80421199-80421218 | Msa0476580:intron | 15.0% |
| !! | ATTATTTATTGAATAACAAG+GGG | - | chr3_3:80421340-80421359 | Msa0476580:intron | 15.0% |
| !!! | AATTTTATTTCTAATATAGG+AGG | + | chr3_3:80421887-80421906 | None:intergenic | 15.0% |
| !!! | ATACATAAGTCAAATTTTTT+GGG | + | chr3_3:80422144-80422163 | None:intergenic | 15.0% |
| !!! | TATACATAAGTCAAATTTTT+TGG | + | chr3_3:80422145-80422164 | None:intergenic | 15.0% |
| !! | AAAAAATCATTTCAAAATCA+AGG | + | chr3_3:80422606-80422625 | None:intergenic | 15.0% |
| !! | TTTGTGTATTATATATTTCA+TGG | + | chr3_3:80422893-80422912 | None:intergenic | 15.0% |
| !! | TATATAATACACAAATTAGT+TGG | - | chr3_3:80422898-80422917 | Msa0476580:five_prime_UTR | 15.0% |
| !!! | TTTTTTTTTTTTTTGAAGGA+AGG | - | chr3_3:80422955-80422974 | Msa0476580:five_prime_UTR | 15.0% |
| !! | GACATAATTTCTAACAATAA+TGG | - | chr3_3:80415838-80415857 | Msa0476580:three_prime_UTR | 20.0% |
| !! | ATAATTTCTAACAATAATGG+CGG | - | chr3_3:80415841-80415860 | Msa0476580:three_prime_UTR | 20.0% |
| !!! | CCTACAATTAATTTTTAGAT+TGG | + | chr3_3:80416495-80416514 | None:intergenic | 20.0% |
| !! | CCAATCTAAAAATTAATTGT+AGG | - | chr3_3:80416492-80416511 | Msa0476580:CDS | 20.0% |
| !!! | TTTTTTTTTTTGATAGAAGG+AGG | - | chr3_3:80416721-80416740 | Msa0476580:intron | 20.0% |
| !!! | TTATTATCGTGTTGTTTTTT+AGG | - | chr3_3:80416765-80416784 | Msa0476580:intron | 20.0% |
| !! | GTTATCTTAAAAAAAGGTTT+AGG | - | chr3_3:80416854-80416873 | Msa0476580:intron | 20.0% |
| !!! | GTTGTTGTTTATTTCAATAA+AGG | - | chr3_3:80416880-80416899 | Msa0476580:intron | 20.0% |
| !!! | TTTTCAGAATGCTAATTAAT+CGG | + | chr3_3:80417471-80417490 | None:intergenic | 20.0% |
| !! | TCTGAAAAGAAAAAAAATGA+AGG | - | chr3_3:80417483-80417502 | Msa0476580:intron | 20.0% |
| !!! | TAAAGACTGCAAATTTTTAT+TGG | - | chr3_3:80418548-80418567 | Msa0476580:CDS | 20.0% |
| !!! | TTTTTATGAAGTTCTGTTTA+CGG | - | chr3_3:80419929-80419948 | Msa0476580:intron | 20.0% |
| !! | ATTGTCAGATATGTAAAATA+AGG | - | chr3_3:80420006-80420025 | Msa0476580:intron | 20.0% |
| !! | TATTCATGATATAAGATGTT+TGG | - | chr3_3:80420076-80420095 | Msa0476580:intron | 20.0% |
| !! | AAATGAATATATGAACAAGT+TGG | + | chr3_3:80420401-80420420 | None:intergenic | 20.0% |
| !! | TTAGCTGTATTTAAAGAAAA+TGG | - | chr3_3:80420613-80420632 | Msa0476580:intron | 20.0% |
| !! | TAGCTGTATTTAAAGAAAAT+GGG | - | chr3_3:80420614-80420633 | Msa0476580:intron | 20.0% |
| !! | ACAAAATGTCTCTTAAATAA+AGG | + | chr3_3:80420759-80420778 | None:intergenic | 20.0% |
| !! | TTAATGACTTTCATTGTATT+GGG | + | chr3_3:80420852-80420871 | None:intergenic | 20.0% |
| !! | ATTAATGACTTTCATTGTAT+TGG | + | chr3_3:80420853-80420872 | None:intergenic | 20.0% |
| !!! | AGGCATTAAAATTTTATTGT+TGG | - | chr3_3:80421238-80421257 | Msa0476580:intron | 20.0% |
| !!! | GGCATTAAAATTTTATTGTT+GGG | - | chr3_3:80421239-80421258 | Msa0476580:intron | 20.0% |
| !!! | TTTCTCTTTAAAAAAAGGAT+CGG | - | chr3_3:80421427-80421446 | Msa0476580:intron | 20.0% |
| !! | TAATTCCAGTAAAAAAACTA+GGG | + | chr3_3:80421602-80421621 | None:intergenic | 20.0% |
| !! | TTAATTCCAGTAAAAAAACT+AGG | + | chr3_3:80421603-80421622 | None:intergenic | 20.0% |
| !! | ACAAAATGTCTCTTATATAA+AGG | + | chr3_3:80421839-80421858 | None:intergenic | 20.0% |
| !! | CAATAATTCAGTATGTATAT+TGG | - | chr3_3:80422190-80422209 | Msa0476580:intron | 20.0% |
| !!! | CTGATGAAATTTTTATCTTT+TGG | - | chr3_3:80422364-80422383 | Msa0476580:intron | 20.0% |
| ! | AATGTAAAGTGATTTATGCT+TGG | - | chr3_3:80416434-80416453 | Msa0476580:CDS | 25.0% |
| ! | AAACATACACTTAATGTTCT+CGG | + | chr3_3:80416579-80416598 | None:intergenic | 25.0% |
| !!! | TAACCTGTTTAGTTTTAGTT+AGG | - | chr3_3:80416789-80416808 | Msa0476580:intron | 25.0% |
| !!! | AACCTGTTTAGTTTTAGTTA+GGG | - | chr3_3:80416790-80416809 | Msa0476580:intron | 25.0% |
| ! | TCGGATGTTATCTTAAAAAA+AGG | - | chr3_3:80416848-80416867 | Msa0476580:intron | 25.0% |
| ! | TCTTAAAAAAAGGTTTAGGT+TGG | - | chr3_3:80416858-80416877 | Msa0476580:intron | 25.0% |
| !!! | ATAAAGGTTTCTAAAACTGA+AGG | - | chr3_3:80416896-80416915 | Msa0476580:intron | 25.0% |
| !! | TGTTTGATGACAATTATTTC+TGG | - | chr3_3:80416957-80416976 | Msa0476580:intron | 25.0% |
| !! | TATTTTGTAGGCTATGTATT+GGG | - | chr3_3:80417410-80417429 | Msa0476580:intron | 25.0% |
| !!! | CTATGTATTGGGTATTTTTT+GGG | - | chr3_3:80417421-80417440 | Msa0476580:intron | 25.0% |
| ! | AAAAAATGAAGGAAACTGAA+AGG | - | chr3_3:80417494-80417513 | Msa0476580:intron | 25.0% |
| ! | AAAAATGAAGGAAACTGAAA+GGG | - | chr3_3:80417495-80417514 | Msa0476580:intron | 25.0% |
| !! | GTAGAAACAAAATGACATTT+TGG | - | chr3_3:80417878-80417897 | Msa0476580:intron | 25.0% |
| !!! | AAACAAAATGACATTTTGGT+AGG | - | chr3_3:80417882-80417901 | Msa0476580:intron | 25.0% |
| !!! | AACAAAATGACATTTTGGTA+GGG | - | chr3_3:80417883-80417902 | Msa0476580:intron | 25.0% |
| ! | TCTTTCACTAAAAATGGTAA+AGG | + | chr3_3:80417950-80417969 | None:intergenic | 25.0% |
| ! | TTCTCCATATTCTCAATAAA+AGG | + | chr3_3:80418255-80418274 | None:intergenic | 25.0% |
| !! | AAAAGTTTCTTCTGCATTTT+TGG | + | chr3_3:80418403-80418422 | None:intergenic | 25.0% |
| !!! | TTACTTTTTCTTACCACTTT+AGG | - | chr3_3:80418596-80418615 | Msa0476580:CDS | 25.0% |
| !!! | TTGTAATTTTTCAAGAACTC+TGG | + | chr3_3:80418969-80418988 | None:intergenic | 25.0% |
| ! | GAAAAATTACAAATCAAGCT+TGG | - | chr3_3:80418977-80418996 | Msa0476580:CDS | 25.0% |
| ! | CAAAATTGTTTGACACATTA+AGG | + | chr3_3:80419096-80419115 | None:intergenic | 25.0% |
| ! | TACCTGAATTATTAGTGATA+TGG | - | chr3_3:80419358-80419377 | Msa0476580:intron | 25.0% |
| ! | ATCCATATCACTAATAATTC+AGG | + | chr3_3:80419363-80419382 | None:intergenic | 25.0% |
| ! | TATCTGTAAGTTCAAAAAAG+AGG | + | chr3_3:80419686-80419705 | None:intergenic | 25.0% |
| ! | TGCATAGAAAAACAAAGTAA+AGG | + | chr3_3:80419827-80419846 | None:intergenic | 25.0% |
| !! | ACGGATTTGGTATTAAAAAA+TGG | - | chr3_3:80419948-80419967 | Msa0476580:intron | 25.0% |
| ! | ATGATTTCACGTTATGATTT+AGG | + | chr3_3:80420048-80420067 | None:intergenic | 25.0% |
| !! | AATATATGAACAAGTTGGAA+GGG | + | chr3_3:80420396-80420415 | None:intergenic | 25.0% |
| ! | TCATTTGTACAAAATAATCC+AGG | - | chr3_3:80420415-80420434 | Msa0476580:CDS | 25.0% |
| ! | TGTATTTAAAGAAAATGGGA+TGG | - | chr3_3:80420618-80420637 | Msa0476580:intron | 25.0% |
| ! | AGAGAAAGCTTCAATATAAA+TGG | - | chr3_3:80420684-80420703 | Msa0476580:intron | 25.0% |
| ! | TAATGACTTTCATTGTATTG+GGG | + | chr3_3:80420851-80420870 | None:intergenic | 25.0% |
| ! | TTAAATACCCCAAACATAAA+TGG | - | chr3_3:80420980-80420999 | Msa0476580:intron | 25.0% |
| !! | ATTCAAATATTTTGCGAATC+AGG | + | chr3_3:80421074-80421093 | None:intergenic | 25.0% |
| !! | AATGCCAAAATTGTTTTCAA+CGG | + | chr3_3:80421111-80421130 | None:intergenic | 25.0% |
| !!! | TTCTTACTCCATTTTTCTTT+GGG | + | chr3_3:80421148-80421167 | None:intergenic | 25.0% |
| !!! | ATTCTTACTCCATTTTTCTT+TGG | + | chr3_3:80421149-80421168 | None:intergenic | 25.0% |
| ! | AAAATGGAGTAAGAATCTAA+AGG | - | chr3_3:80421153-80421172 | Msa0476580:intron | 25.0% |
| ! | AAATGGAGTAAGAATCTAAA+GGG | - | chr3_3:80421154-80421173 | Msa0476580:intron | 25.0% |
| !!! | TTAACTAAAAGCATTTGTGT+GGG | + | chr3_3:80421195-80421214 | None:intergenic | 25.0% |
| !!! | TTTAACTAAAAGCATTTGTG+TGG | + | chr3_3:80421196-80421215 | None:intergenic | 25.0% |
| !!! | TGCTTTTAGTTAAATTTTGG+TGG | - | chr3_3:80421202-80421221 | Msa0476580:intron | 25.0% |
| !!! | AAATTTTGGTGGTAAATTCT+TGG | - | chr3_3:80421213-80421232 | Msa0476580:intron | 25.0% |
| ! | TAAATGCAGACAATTAAATG+TGG | + | chr3_3:80421284-80421303 | None:intergenic | 25.0% |
| !!! | GGTATTTTAGGAATATAAAG+TGG | - | chr3_3:80421361-80421380 | Msa0476580:intron | 25.0% |
| ! | AATAACTACTTTGATGTACT+TGG | - | chr3_3:80421385-80421404 | Msa0476580:intron | 25.0% |
| !!! | AATAAAAACTGAAAGTGTCT+TGG | + | chr3_3:80421496-80421515 | None:intergenic | 25.0% |
| !!! | TTAATCCCTAGTTTTTTTAC+TGG | - | chr3_3:80421594-80421613 | Msa0476580:CDS | 25.0% |
| !! | GGAATTAAACAACTTTTGTT+AGG | - | chr3_3:80421615-80421634 | Msa0476580:CDS | 25.0% |
| !! | ATTAAACAACTTTTGTTAGG+TGG | - | chr3_3:80421618-80421637 | Msa0476580:CDS | 25.0% |
| !! | TTAAACAACTTTTGTTAGGT+GGG | - | chr3_3:80421619-80421638 | Msa0476580:CDS | 25.0% |
| !!! | TACTCATTATTTTGAACTGT+TGG | - | chr3_3:80421643-80421662 | Msa0476580:CDS | 25.0% |
| ! | TTATATTCACACATAACTTG+AGG | - | chr3_3:80421906-80421925 | Msa0476580:intron | 25.0% |
| ! | TCTACACATGCTATAAAAAA+TGG | - | chr3_3:80422059-80422078 | Msa0476580:intron | 25.0% |
| !!! | TTTGGTTTCCTATTTTAAGA+GGG | + | chr3_3:80422102-80422121 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTCCTATTTTAAG+AGG | + | chr3_3:80422103-80422122 | None:intergenic | 25.0% |
| !!! | ACAAAGGAGTATTTCATTTT+TGG | + | chr3_3:80422269-80422288 | None:intergenic | 25.0% |
| ! | AAAATTTCATCAGTGTAGTT+TGG | + | chr3_3:80422357-80422376 | None:intergenic | 25.0% |
| !!! | TGATAATGCTTGAGAAATTT+TGG | - | chr3_3:80422393-80422412 | Msa0476580:intron | 25.0% |
| ! | ATAATAAGAGTTTGCATCTA+TGG | - | chr3_3:80422804-80422823 | Msa0476580:CDS | 25.0% |
| GTTAGAAATTATGTCGAGAT+TGG | + | chr3_3:80415833-80415852 | None:intergenic | 30.0% | |
| !! | ATGAATGAGTTGGTGATTTA+GGG | + | chr3_3:80416038-80416057 | None:intergenic | 30.0% |
| GATTGATAAGATGAATGAGT+TGG | + | chr3_3:80416048-80416067 | None:intergenic | 30.0% | |
| !!! | TCGCTTTTTGCTATTAAGAA+TGG | - | chr3_3:80416196-80416215 | Msa0476580:CDS | 30.0% |
| CAAGTTAGAATCAATTCTAG+AGG | - | chr3_3:80416539-80416558 | Msa0476580:intron | 30.0% | |
| GAGAACATTAAGTGTATGTT+TGG | - | chr3_3:80416578-80416597 | Msa0476580:intron | 30.0% | |
| ! | CGTAATTGATTCTATAAGTG+TGG | - | chr3_3:80416619-80416638 | Msa0476580:intron | 30.0% |
| ! | TTTTGCCTCCAAAATTGATT+CGG | - | chr3_3:80416682-80416701 | Msa0476580:intron | 30.0% |
| AACCCTAACTAAAACTAAAC+AGG | + | chr3_3:80416795-80416814 | None:intergenic | 30.0% | |
| ! | TTTAGTTTCATTCCATTGCT+AGG | - | chr3_3:80416813-80416832 | Msa0476580:intron | 30.0% |
| !! | ATTATTTCTGGCGTTGATTT+CGG | - | chr3_3:80416969-80416988 | Msa0476580:intron | 30.0% |
| CAAGATTCATTCAAAATTGC+AGG | - | chr3_3:80417024-80417043 | Msa0476580:intron | 30.0% | |
| AAATGGAGATGTGAATTTGT+CGG | - | chr3_3:80417093-80417112 | Msa0476580:intron | 30.0% | |
| !! | GTGTAACATAGAATTTTAGC+CGG | + | chr3_3:80417225-80417244 | None:intergenic | 30.0% |
| ATTCTATGTTACACATGCAA+AGG | - | chr3_3:80417231-80417250 | Msa0476580:intron | 30.0% | |
| ! | TGTGTTTGTGTGTTTTATAC+TGG | - | chr3_3:80417279-80417298 | Msa0476580:intron | 30.0% |
| ! | CTATTTTGTAGGCTATGTAT+TGG | - | chr3_3:80417409-80417428 | Msa0476580:intron | 30.0% |
| !!! | GCTATGTATTGGGTATTTTT+TGG | - | chr3_3:80417420-80417439 | Msa0476580:intron | 30.0% |
| TCGTATAAATTACCTGAACA+TGG | + | chr3_3:80417542-80417561 | None:intergenic | 30.0% | |
| TTGATCATAGTGAAAAAACC+TGG | + | chr3_3:80417806-80417825 | None:intergenic | 30.0% | |
| TCTACGTCTTTCACTAAAAA+TGG | + | chr3_3:80417956-80417975 | None:intergenic | 30.0% | |
| GAATGTTACCCATTAATTCT+TGG | + | chr3_3:80418056-80418075 | None:intergenic | 30.0% | |
| TTATTGAGAATATGGAGAAG+AGG | - | chr3_3:80418256-80418275 | Msa0476580:CDS | 30.0% | |
| !!! | TGCATTTTTGGTGTTATCAA+TGG | + | chr3_3:80418391-80418410 | None:intergenic | 30.0% |
| TTATTGGATATTTCTTCTGC+TGG | - | chr3_3:80418564-80418583 | Msa0476580:CDS | 30.0% | |
| TGGTAAGAAAAAGTAAGATG+AGG | + | chr3_3:80418592-80418611 | None:intergenic | 30.0% | |
| ! | TTTCTTACCACTTTAGGTTT+AGG | - | chr3_3:80418602-80418621 | Msa0476580:CDS | 30.0% |
| ATGACAGATTAAAGCTCATA+TGG | + | chr3_3:80418630-80418649 | None:intergenic | 30.0% | |
| TTTAATCTGTCATACTGGAT+TGG | - | chr3_3:80418637-80418656 | Msa0476580:CDS | 30.0% | |
| !! | CTAACTTTTAAAGACCAAGA+AGG | + | chr3_3:80418704-80418723 | None:intergenic | 30.0% |
| ! | CATATCTAAAGTTTGGCATT+TGG | - | chr3_3:80418834-80418853 | Msa0476580:intron | 30.0% |
| ! | GAAAAGTAAGATTAGCTGAA+AGG | + | chr3_3:80419039-80419058 | None:intergenic | 30.0% |
| CAGAAAGAATGAAGAAAATG+TGG | - | chr3_3:80419070-80419089 | Msa0476580:intron | 30.0% | |
| ! | ATGTCATTTAATTCCATGCA+AGG | - | chr3_3:80419191-80419210 | Msa0476580:CDS | 30.0% |
| !!! | TTAGAGAGTATTTTGCTTTG+AGG | - | chr3_3:80419297-80419316 | Msa0476580:CDS | 30.0% |
| AAAACAAAGTGTAACTCTGT+TGG | - | chr3_3:80419510-80419529 | Msa0476580:CDS | 30.0% | |
| TGTAAGTTCAAAAAAGAGGT+TGG | + | chr3_3:80419682-80419701 | None:intergenic | 30.0% | |
| GAACTTACAGATACTCAAAT+TGG | - | chr3_3:80419693-80419712 | Msa0476580:intron | 30.0% | |
| CACGTTATGATTTAGGTAAT+AGG | + | chr3_3:80420041-80420060 | None:intergenic | 30.0% | |
| CATAACGTGAAATCATTTGT+AGG | - | chr3_3:80420052-80420071 | Msa0476580:intron | 30.0% | |
| TCATGATATAAGATGTTTGG+AGG | - | chr3_3:80420079-80420098 | Msa0476580:intron | 30.0% | |
| !! | TTACTGATTCAAGGACATTA+GGG | + | chr3_3:80420160-80420179 | None:intergenic | 30.0% |
| TAAAGGTTCAAAGGATTTCA+AGG | + | chr3_3:80420210-80420229 | None:intergenic | 30.0% | |
| ! | TTTGATGACTAAAGGTTCAA+AGG | + | chr3_3:80420219-80420238 | None:intergenic | 30.0% |
| ! | GAATATATGAACAAGTTGGA+AGG | + | chr3_3:80420397-80420416 | None:intergenic | 30.0% |
| TCGATATCACATACCTTTAA+GGG | + | chr3_3:80420536-80420555 | None:intergenic | 30.0% | |
| ATCGATATCACATACCTTTA+AGG | + | chr3_3:80420537-80420556 | None:intergenic | 30.0% | |
| ! | GTGATATCGATCAAGTTTTA+TGG | - | chr3_3:80420546-80420565 | Msa0476580:intron | 30.0% |
| ACCATGAAAAGAAGTAATCA+GGG | + | chr3_3:80420587-80420606 | None:intergenic | 30.0% | |
| AACCATGAAAAGAAGTAATC+AGG | + | chr3_3:80420588-80420607 | None:intergenic | 30.0% | |
| ! | TTACTTCTTTTCATGGTTAC+TGG | - | chr3_3:80420590-80420609 | Msa0476580:intron | 30.0% |
| GCTTCAATATAAATGGTGAT+TGG | - | chr3_3:80420691-80420710 | Msa0476580:intron | 30.0% | |
| AGAGACATTCTTCATATACA+TGG | + | chr3_3:80420961-80420980 | None:intergenic | 30.0% | |
| ! | TTTGCCGTTGAAAACAATTT+TGG | - | chr3_3:80421104-80421123 | Msa0476580:intron | 30.0% |
| ATACTCAACCCAAAGAAAAA+TGG | - | chr3_3:80421137-80421156 | Msa0476580:intron | 30.0% | |
| AATGGAGTAAGAATCTAAAG+GGG | - | chr3_3:80421155-80421174 | Msa0476580:intron | 30.0% | |
| !!! | TGAATAACAAGGGGTATTTT+AGG | - | chr3_3:80421349-80421368 | Msa0476580:intron | 30.0% |
| ! | TCTTTAAAAAAAGGATCGGA+GGG | - | chr3_3:80421431-80421450 | Msa0476580:intron | 30.0% |
| TTACTCAATTAGTTGTGTCA+AGG | + | chr3_3:80421472-80421491 | None:intergenic | 30.0% | |
| TGTTTCTCATTGTCAGAAAA+AGG | - | chr3_3:80421515-80421534 | Msa0476580:CDS | 30.0% | |
| AAAATACAGTAGTCAGTTCA+TGG | + | chr3_3:80421557-80421576 | None:intergenic | 30.0% | |
| TGAACATGTAATAATCCTGT+CGG | + | chr3_3:80421673-80421692 | None:intergenic | 30.0% | |
| AATAACTCCTCTTTCTTTCT+GGG | + | chr3_3:80421734-80421753 | None:intergenic | 30.0% | |
| !! | TGAGGAACTGAGTTTATTTT+TGG | - | chr3_3:80421812-80421831 | Msa0476580:intron | 30.0% |
| TTCTAATATAGGAGGATTGA+AGG | + | chr3_3:80421879-80421898 | None:intergenic | 30.0% | |
| AGATTGAATCCAATCTGATA+TGG | - | chr3_3:80421988-80422007 | Msa0476580:intron | 30.0% | |
| !! | CAAGAAGAGTGTTCAAAATT+GGG | + | chr3_3:80422032-80422051 | None:intergenic | 30.0% |
| !! | ACAAGAAGAGTGTTCAAAAT+TGG | + | chr3_3:80422033-80422052 | None:intergenic | 30.0% |
| ATCGAATTCCCTCTTAAAAT+AGG | - | chr3_3:80422091-80422110 | Msa0476580:intron | 30.0% | |
| !!! | CATAAGTCAAATTTTTTGGG+AGG | + | chr3_3:80422141-80422160 | None:intergenic | 30.0% |
| !!! | AGTTGGCTTTTACACAAATT+AGG | - | chr3_3:80422915-80422934 | Msa0476580:five_prime_UTR | 30.0% |
| AACCTAGTTCAATGTAGACT+GGG | + | chr3_3:80415746-80415765 | None:intergenic | 35.0% | |
| AAACCTAGTTCAATGTAGAC+TGG | + | chr3_3:80415747-80415766 | None:intergenic | 35.0% | |
| ! | ATGATTCGGAATCGAAGTTA+GGG | + | chr3_3:80415946-80415965 | None:intergenic | 35.0% |
| ! | TATGATTCGGAATCGAAGTT+AGG | + | chr3_3:80415947-80415966 | None:intergenic | 35.0% |
| !! | GATGAATGAGTTGGTGATTT+AGG | + | chr3_3:80416039-80416058 | None:intergenic | 35.0% |
| ATCCACATCAACAATGTTAG+CGG | + | chr3_3:80416098-80416117 | None:intergenic | 35.0% | |
| ! | TTCGTTTCATCTTGTTTCCA+AGG | - | chr3_3:80416276-80416295 | Msa0476580:CDS | 35.0% |
| ! | ATACACCTCCGAATCAATTT+TGG | + | chr3_3:80416693-80416712 | None:intergenic | 35.0% |
| TTCATTCCATTGCTAGGTTT+AGG | - | chr3_3:80416819-80416838 | Msa0476580:intron | 35.0% | |
| GATTCATTCAAAATTGCAGG+TGG | - | chr3_3:80417027-80417046 | Msa0476580:intron | 35.0% | |
| AGAAAAGTTCGTTGAGCAAT+GGG | - | chr3_3:80417116-80417135 | Msa0476580:intron | 35.0% | |
| TCAGAATGCTAATTAATCGG+TGG | + | chr3_3:80417468-80417487 | None:intergenic | 35.0% | |
| ACAAAAAGATAGCCATGTTC+AGG | - | chr3_3:80417527-80417546 | Msa0476580:intron | 35.0% | |
| TGAACACAGACAGTAGATTA+AGG | + | chr3_3:80417625-80417644 | None:intergenic | 35.0% | |
| !! | TAGCTTTGACTGTAGTTGTT+AGG | - | chr3_3:80417660-80417679 | Msa0476580:intron | 35.0% |
| ! | AGCTTTGACTGTAGTTGTTA+GGG | - | chr3_3:80417661-80417680 | Msa0476580:intron | 35.0% |
| CATGTTGGTATCTCTTTGTT+TGG | - | chr3_3:80417740-80417759 | Msa0476580:intron | 35.0% | |
| TCATAGTGAAAAAACCTGGT+CGG | + | chr3_3:80417802-80417821 | None:intergenic | 35.0% | |
| ! | AAATGGTAAAGGTTCGCTTT+TGG | + | chr3_3:80417939-80417958 | None:intergenic | 35.0% |
| TTCTTGGAGTGCATCTAATA+TGG | + | chr3_3:80418040-80418059 | None:intergenic | 35.0% | |
| AGATGCACTCCAAGAATTAA+TGG | - | chr3_3:80418044-80418063 | Msa0476580:intron | 35.0% | |
| GATGCACTCCAAGAATTAAT+GGG | - | chr3_3:80418045-80418064 | Msa0476580:intron | 35.0% | |
| CATTCACAGTGTTAGATTGT+CGG | - | chr3_3:80418071-80418090 | Msa0476580:intron | 35.0% | |
| ! | ACTTCAAGGCATCTAATACT+TGG | + | chr3_3:80418115-80418134 | None:intergenic | 35.0% |
| TTAACACCAGCAAAACTTCA+AGG | + | chr3_3:80418129-80418148 | None:intergenic | 35.0% | |
| CCATATTCTCAATAAAAGGC+AGG | + | chr3_3:80418251-80418270 | None:intergenic | 35.0% | |
| ! | CCTGCCTTTTATTGAGAATA+TGG | - | chr3_3:80418248-80418267 | Msa0476580:CDS | 35.0% |
| CTATTAGTAGATGCAAGCTT+GGG | - | chr3_3:80418294-80418313 | Msa0476580:CDS | 35.0% | |
| ! | TTGTAGATGGTCTAAAACAC+CGG | - | chr3_3:80418325-80418344 | Msa0476580:intron | 35.0% |
| TATGGATCCTAAACCTAAAG+TGG | + | chr3_3:80418612-80418631 | None:intergenic | 35.0% | |
| ! | TGAGCTTTAATCTGTCATAC+TGG | - | chr3_3:80418632-80418651 | Msa0476580:CDS | 35.0% |
| TTAAAGACCAAGAAGGACTA+AGG | + | chr3_3:80418697-80418716 | None:intergenic | 35.0% | |
| CCATCTTTCACATACATGTA+CGG | - | chr3_3:80418735-80418754 | Msa0476580:intron | 35.0% | |
| ! | TTTACACGTCTTTGACTTCT+TGG | - | chr3_3:80418872-80418891 | Msa0476580:intron | 35.0% |
| ! | AACCTCTCTAAGGATTGAAT+TGG | + | chr3_3:80418898-80418917 | None:intergenic | 35.0% |
| !! | GTTCTCTTTGCTATTCAGAA+GGG | - | chr3_3:80418915-80418934 | Msa0476580:intron | 35.0% |
| TTCATTCTTTCTGTTGCTCA+AGG | + | chr3_3:80419063-80419082 | None:intergenic | 35.0% | |
| AAATTTAGCAACAGCAGATC+TGG | + | chr3_3:80419228-80419247 | None:intergenic | 35.0% | |
| ATTCCATTGCTTCATGAACT+CGG | + | chr3_3:80419270-80419289 | None:intergenic | 35.0% | |
| AGTTCATGAAGCAATGGAAT+TGG | - | chr3_3:80419270-80419289 | Msa0476580:CDS | 35.0% | |
| ! | GGTGATTCTGATCTTTAAGA+TGG | - | chr3_3:80419318-80419337 | Msa0476580:CDS | 35.0% |
| TTAGGTTTCAGGAAATAGCA+GGG | - | chr3_3:80419401-80419420 | Msa0476580:intron | 35.0% | |
| ! | CAGGATCTAAATTTTGAACG+GGG | + | chr3_3:80419462-80419481 | None:intergenic | 35.0% |
| ! | CCAGGATCTAAATTTTGAAC+GGG | + | chr3_3:80419463-80419482 | None:intergenic | 35.0% |
| ! | GCCAGGATCTAAATTTTGAA+CGG | + | chr3_3:80419464-80419483 | None:intergenic | 35.0% |
| ! | CTTCTTTCTAGGTCAGTTTT+AGG | - | chr3_3:80419610-80419629 | Msa0476580:intron | 35.0% |
| GATGTTTCAGATGTCATAGA+TGG | - | chr3_3:80419779-80419798 | Msa0476580:CDS | 35.0% | |
| TGAAGTTCTGTTTACGGATT+TGG | - | chr3_3:80419935-80419954 | Msa0476580:intron | 35.0% | |
| !! | TACTGATTCAAGGACATTAG+GGG | + | chr3_3:80420159-80420178 | None:intergenic | 35.0% |
| !! | CTTACTGATTCAAGGACATT+AGG | + | chr3_3:80420161-80420180 | None:intergenic | 35.0% |
| CTAATGTCCTTGAATCAGTA+AGG | - | chr3_3:80420159-80420178 | Msa0476580:intron | 35.0% | |
| TTGGTTGCATTATTCAGATC+TGG | - | chr3_3:80420308-80420327 | Msa0476580:CDS | 35.0% | |
| ! | ACCCTGATTACTTCTTTTCA+TGG | - | chr3_3:80420583-80420602 | Msa0476580:intron | 35.0% |
| ATGGGATGGTGATATATTTC+TGG | - | chr3_3:80420632-80420651 | Msa0476580:intron | 35.0% | |
| TACTAATATAGGGGGATTGA+AGG | + | chr3_3:80420799-80420818 | None:intergenic | 35.0% | |
| TCCTACTCCATTTATGTTTG+GGG | + | chr3_3:80420990-80421009 | None:intergenic | 35.0% | |
| CTCCTACTCCATTTATGTTT+GGG | + | chr3_3:80420991-80421010 | None:intergenic | 35.0% | |
| ! | CTCTTTAAAAAAAGGATCGG+AGG | - | chr3_3:80421430-80421449 | Msa0476580:intron | 35.0% |
| ATTTCAACCCAGAAAGAAAG+AGG | - | chr3_3:80421724-80421743 | Msa0476580:intron | 35.0% | |
| CAATAACTCCTCTTTCTTTC+TGG | + | chr3_3:80421735-80421754 | None:intergenic | 35.0% | |
| AACTACACTCATGCAAATTG+AGG | - | chr3_3:80421794-80421813 | Msa0476580:intron | 35.0% | |
| TTGAATCCAATCTGATATGG+TGG | - | chr3_3:80421991-80422010 | Msa0476580:intron | 35.0% | |
| TGAATCCAATCTGATATGGT+GGG | - | chr3_3:80421992-80422011 | Msa0476580:intron | 35.0% | |
| ! | TATGTATATTGGTGACATGC+AGG | - | chr3_3:80422201-80422220 | Msa0476580:intron | 35.0% |
| TGGGGAGAAAATCTCATATT+TGG | - | chr3_3:80422234-80422253 | Msa0476580:intron | 35.0% | |
| AGAAAGAATTCACAGTTTGC+AGG | + | chr3_3:80422640-80422659 | None:intergenic | 35.0% | |
| TTGCATCCTATGGTTCATTA+TGG | - | chr3_3:80422743-80422762 | Msa0476580:CDS | 35.0% | |
| !! | GAAACCGTTTTGGATGTTGA+GGG | + | chr3_3:80415796-80415815 | None:intergenic | 40.0% |
| ! | GAGAATGATCGAAACCGTTT+TGG | + | chr3_3:80415806-80415825 | None:intergenic | 40.0% |
| ! | TGATTCGGAATCGAAGTTAG+GGG | + | chr3_3:80415945-80415964 | None:intergenic | 40.0% |
| GAGTTGGGAGATGTATGATT+CGG | + | chr3_3:80415960-80415979 | None:intergenic | 40.0% | |
| !! | GGTAGTTGTTGAGTTGAGAA+CGG | + | chr3_3:80416009-80416028 | None:intergenic | 40.0% |
| !! | GTTGGTGATTTAGGGATGAA+AGG | + | chr3_3:80416030-80416049 | None:intergenic | 40.0% |
| TACCGCTAACATTGTTGATG+TGG | - | chr3_3:80416093-80416112 | Msa0476580:intron | 40.0% | |
| !! | GATGAAAGCATTGTGTACCT+TGG | + | chr3_3:80416296-80416315 | None:intergenic | 40.0% |
| ! | ATGTTTGGTTCCTCTTCTAG+AGG | - | chr3_3:80416593-80416612 | Msa0476580:intron | 40.0% |
| ! | TGTTTGGTTCCTCTTCTAGA+GGG | - | chr3_3:80416594-80416613 | Msa0476580:intron | 40.0% |
| ! | AGGAGGTGTATCTGTTTAGT+AGG | - | chr3_3:80416738-80416757 | Msa0476580:intron | 40.0% |
| CCTAAACCTAAACCTAGCAA+TGG | + | chr3_3:80416828-80416847 | None:intergenic | 40.0% | |
| ! | CCATTGCTAGGTTTAGGTTT+AGG | - | chr3_3:80416825-80416844 | Msa0476580:intron | 40.0% |
| ! | TGCTAGGTTTAGGTTTAGGT+CGG | - | chr3_3:80416829-80416848 | Msa0476580:intron | 40.0% |
| GAAGGAACTCTTTCATCTTC+TGG | - | chr3_3:80416914-80416933 | Msa0476580:intron | 40.0% | |
| GCAGGTGGAGAAACTAATAA+AGG | - | chr3_3:80417042-80417061 | Msa0476580:intron | 40.0% | |
| GAGAAAAGTTCGTTGAGCAA+TGG | - | chr3_3:80417115-80417134 | Msa0476580:intron | 40.0% | |
| GAAAAGTTCGTTGAGCAATG+GGG | - | chr3_3:80417117-80417136 | Msa0476580:intron | 40.0% | |
| ! | TGAACTTGTTTGCTGAAGCT+TGG | - | chr3_3:80417368-80417387 | Msa0476580:intron | 40.0% |
| CCTACAAAATAGTGTACCCT+TGG | + | chr3_3:80417401-80417420 | None:intergenic | 40.0% | |
| !! | CCAAGGGTACACTATTTTGT+AGG | - | chr3_3:80417398-80417417 | Msa0476580:intron | 40.0% |
| TATACTTAACCAGTCGCTGA+AGG | - | chr3_3:80417598-80417617 | Msa0476580:intron | 40.0% | |
| ACTGTAGTTGTTAGGGTCAA+TGG | - | chr3_3:80417668-80417687 | Msa0476580:intron | 40.0% | |
| AGAGTGCGAAAGTCTAGAAA+GGG | - | chr3_3:80417696-80417715 | Msa0476580:intron | 40.0% | |
| ! | GTTGGTATCTCTTTGTTTGG+AGG | - | chr3_3:80417743-80417762 | Msa0476580:intron | 40.0% |
| TTGGTAGGGTTTGTCTAACA+TGG | - | chr3_3:80417897-80417916 | Msa0476580:intron | 40.0% | |
| !! | TTCGCTTTTGGACCATCTTT+GGG | + | chr3_3:80417927-80417946 | None:intergenic | 40.0% |
| ! | TAGATGCCTTGAAGTTTTGC+TGG | - | chr3_3:80418120-80418139 | Msa0476580:intron | 40.0% |
| ATAAAAGGCAGGTTCTGTAC+TGG | + | chr3_3:80418240-80418259 | None:intergenic | 40.0% | |
| CCAAGCTTGCATCTACTAAT+AGG | + | chr3_3:80418296-80418315 | None:intergenic | 40.0% | |
| CCTATTAGTAGATGCAAGCT+TGG | - | chr3_3:80418293-80418312 | Msa0476580:CDS | 40.0% | |
| TTGGGACATTGCTTTGTAGA+TGG | - | chr3_3:80418312-80418331 | Msa0476580:intron | 40.0% | |
| ! | TGTAGATGGTCTAAAACACC+GGG | - | chr3_3:80418326-80418345 | Msa0476580:intron | 40.0% |
| TGTAAATTGCAGTTGCATCC+CGG | + | chr3_3:80418347-80418366 | None:intergenic | 40.0% | |
| GGGATAATCTTCTGCATCAA+TGG | + | chr3_3:80418444-80418463 | None:intergenic | 40.0% | |
| ATGCAGAAGATTATCCCACA+TGG | - | chr3_3:80418447-80418466 | Msa0476580:intron | 40.0% | |
| TGCAGAAGATTATCCCACAT+GGG | - | chr3_3:80418448-80418467 | Msa0476580:intron | 40.0% | |
| CCGTACATGTATGTGAAAGA+TGG | + | chr3_3:80418738-80418757 | None:intergenic | 40.0% | |
| ! | ACATACATGTACGGTTAGCT+AGG | - | chr3_3:80418744-80418763 | Msa0476580:intron | 40.0% |
| ! | ACGGTTAGCTAGGTCATTTA+TGG | - | chr3_3:80418754-80418773 | Msa0476580:intron | 40.0% |
| GTCATTTATGGTCATGCTTG+TGG | - | chr3_3:80418766-80418785 | Msa0476580:intron | 40.0% | |
| !! | GCATTTGGTGCAGAAAATTC+AGG | - | chr3_3:80418849-80418868 | Msa0476580:intron | 40.0% |
| TAGCAAAGAGAACCTCTCTA+AGG | + | chr3_3:80418908-80418927 | None:intergenic | 40.0% | |
| !! | GGTTCTCTTTGCTATTCAGA+AGG | - | chr3_3:80418914-80418933 | Msa0476580:intron | 40.0% |
| CAAATCAAGCTTGGAGTTCT+TGG | - | chr3_3:80418986-80419005 | Msa0476580:CDS | 40.0% | |
| GAGTTCTTGGCTTATCTAGA+AGG | - | chr3_3:80418999-80419018 | Msa0476580:CDS | 40.0% | |
| ATACCGAGTTCATGAAGCAA+TGG | - | chr3_3:80419264-80419283 | Msa0476580:CDS | 40.0% | |
| CTCATATCGTCAATTGCCTT+AGG | - | chr3_3:80419383-80419402 | Msa0476580:intron | 40.0% | |
| !! | CTGCTATTTCCTGAAACCTA+AGG | + | chr3_3:80419402-80419421 | None:intergenic | 40.0% |
| CTTAGGTTTCAGGAAATAGC+AGG | - | chr3_3:80419400-80419419 | Msa0476580:intron | 40.0% | |
| ! | TCTAAATTTTGAACGGGGAC+AGG | + | chr3_3:80419457-80419476 | None:intergenic | 40.0% |
| CCCGTTCAAAATTTAGATCC+TGG | - | chr3_3:80419460-80419479 | Msa0476580:CDS | 40.0% | |
| !! | TCTTGATAATTTGCTTCGCC+AGG | + | chr3_3:80419481-80419500 | None:intergenic | 40.0% |
| GGAATTTGTCGGAACAAGAA+AGG | + | chr3_3:80419573-80419592 | None:intergenic | 40.0% | |
| !!! | CTTTCTAGGTCAGTTTTAGG+TGG | - | chr3_3:80419613-80419632 | Msa0476580:intron | 40.0% |
| AAGAGTCATAACACAAGCAC+CGG | - | chr3_3:80419740-80419759 | Msa0476580:CDS | 40.0% | |
| AGTCTTCAACACACAGATGT+GGG | + | chr3_3:80419869-80419888 | None:intergenic | 40.0% | |
| AAGTCTTCAACACACAGATG+TGG | + | chr3_3:80419870-80419889 | None:intergenic | 40.0% | |
| TGGTGATTACTTACAACACG+TGG | - | chr3_3:80420112-80420131 | Msa0476580:intron | 40.0% | |
| TTACTTACAACACGTGGTTC+AGG | - | chr3_3:80420118-80420137 | Msa0476580:intron | 40.0% | |
| ACCTTTAGTCATCAAAGCAG+TGG | - | chr3_3:80420223-80420242 | Msa0476580:CDS | 40.0% | |
| ! | ACCACTGCTTTGATGACTAA+AGG | + | chr3_3:80420227-80420246 | None:intergenic | 40.0% |
| TTTAGTCATCAAAGCAGTGG+TGG | - | chr3_3:80420226-80420245 | Msa0476580:CDS | 40.0% | |
| ! | AACAAGTTGGAAGGGAAATG+GGG | + | chr3_3:80420388-80420407 | None:intergenic | 40.0% |
| ! | GAACAAGTTGGAAGGGAAAT+GGG | + | chr3_3:80420389-80420408 | None:intergenic | 40.0% |
| ! | TGAACAAGTTGGAAGGGAAA+TGG | + | chr3_3:80420390-80420409 | None:intergenic | 40.0% |
| CTAATAAGCCTCTACCTGTT+AGG | - | chr3_3:80420480-80420499 | Msa0476580:CDS | 40.0% | |
| ACATATGGTGATTGCCTAAC+AGG | + | chr3_3:80420497-80420516 | None:intergenic | 40.0% | |
| CGTAATACTCCAGCAACATA+TGG | + | chr3_3:80420512-80420531 | None:intergenic | 40.0% | |
| ! | TGGAGTATTACGTCCCTTAA+AGG | - | chr3_3:80420520-80420539 | Msa0476580:intron | 40.0% |
| ! | AAGGTATTCACCGATAACCA+TGG | - | chr3_3:80420923-80420942 | Msa0476580:intron | 40.0% |
| AGGTATTCACCGATAACCAT+GGG | - | chr3_3:80420924-80420943 | Msa0476580:intron | 40.0% | |
| TTAAACCGTCCCATGGTTAT+CGG | + | chr3_3:80420936-80420955 | None:intergenic | 40.0% | |
| ACCCCAAACATAAATGGAGT+AGG | - | chr3_3:80420986-80421005 | Msa0476580:intron | 40.0% | |
| GCTCCTACTCCATTTATGTT+TGG | + | chr3_3:80420992-80421011 | None:intergenic | 40.0% | |
| ATAAATGGAGTAGGAGCTAG+AGG | - | chr3_3:80420995-80421014 | Msa0476580:intron | 40.0% | |
| TAAATGGAGTAGGAGCTAGA+GGG | - | chr3_3:80420996-80421015 | Msa0476580:intron | 40.0% | |
| GGATGTCTTTCCTTTGCATT+TGG | - | chr3_3:80421040-80421059 | Msa0476580:CDS | 40.0% | |
| TGTCTTTCCTTTGCATTTGG+TGG | - | chr3_3:80421043-80421062 | Msa0476580:CDS | 40.0% | |
| ! | GGATTTTCCACCAAATGCAA+AGG | + | chr3_3:80421053-80421072 | None:intergenic | 40.0% |
| ! | TTGGTGGTAAATTCTTGGCA+AGG | - | chr3_3:80421218-80421237 | Msa0476580:intron | 40.0% |
| ! | TCTTTCTGGGTTGAAATGTG+AGG | + | chr3_3:80421721-80421740 | None:intergenic | 40.0% |
| !! | GTGCTTAGCTTGTTAGTTAG+AGG | - | chr3_3:80421760-80421779 | Msa0476580:intron | 40.0% |
| !!! | GTGCTTAGCTTTTGAGTTAG+AGG | - | chr3_3:80421945-80421964 | Msa0476580:intron | 40.0% |
| ! | GGTTCGTCATCTTGATCTTT+TGG | + | chr3_3:80422120-80422139 | None:intergenic | 40.0% |
| TAATCTCAGTTGCAGCACAA+AGG | + | chr3_3:80422285-80422304 | None:intergenic | 40.0% | |
| TCTTACCACAGTAACAAGGT+CGG | + | chr3_3:80422332-80422351 | None:intergenic | 40.0% | |
| GGATTCTTACCACAGTAACA+AGG | + | chr3_3:80422336-80422355 | None:intergenic | 40.0% | |
| TTGGTTACGAGTAGTCAAGA+AGG | - | chr3_3:80422412-80422431 | Msa0476580:intron | 40.0% | |
| CTGTTCCTTGATATTCAGGT+AGG | - | chr3_3:80422543-80422562 | Msa0476580:CDS | 40.0% | |
| TCATGCCTACCTGAATATCA+AGG | + | chr3_3:80422551-80422570 | None:intergenic | 40.0% | |
| GCAGTCAATATTGCATCCTA+TGG | - | chr3_3:80422733-80422752 | Msa0476580:CDS | 40.0% | |
| ACACTGCCATAATGAACCAT+AGG | + | chr3_3:80422752-80422771 | None:intergenic | 40.0% | |
| ATTGTGTTCTGCTTATCTGC+TGG | + | chr3_3:80422781-80422800 | None:intergenic | 40.0% | |
| TTGCATCTATGGAGTAGATG+CGG | - | chr3_3:80422815-80422834 | Msa0476580:CDS | 40.0% | |
| ! | AGGTTGATTGCTTTCTTGTG+TGG | - | chr3_3:80422843-80422862 | Msa0476580:CDS | 40.0% |
| CACTCCCTCAACATCCAAAA+CGG | - | chr3_3:80415789-80415808 | Msa0476580:intron | 45.0% | |
| !! | CGAAACCGTTTTGGATGTTG+AGG | + | chr3_3:80415797-80415816 | None:intergenic | 45.0% |
| AAGCTCCAAAGTCTCTCTAG+CGG | + | chr3_3:80416248-80416267 | None:intergenic | 45.0% | |
| ! | GTTTGGTTCCTCTTCTAGAG+GGG | - | chr3_3:80416595-80416614 | Msa0476580:intron | 45.0% |
| ! | AATTACGACCCCTCTAGAAG+AGG | + | chr3_3:80416606-80416625 | None:intergenic | 45.0% |
| !! | TGCCTCCAAAATTGATTCGG+AGG | - | chr3_3:80416685-80416704 | Msa0476580:intron | 45.0% |
| ! | CACCTCCGAATCAATTTTGG+AGG | + | chr3_3:80416690-80416709 | None:intergenic | 45.0% |
| !! | GCGTTGATTTCGGAAACCTT+CGG | - | chr3_3:80416979-80416998 | Msa0476580:intron | 45.0% |
| !! | CGTTGATTTCGGAAACCTTC+GGG | - | chr3_3:80416980-80416999 | Msa0476580:intron | 45.0% |
| ! | GTTGATTTCGGAAACCTTCG+GGG | - | chr3_3:80416981-80417000 | Msa0476580:intron | 45.0% |
| ! | ATAGACTCCGACTGGTCAAA+TGG | - | chr3_3:80417076-80417095 | Msa0476580:intron | 45.0% |
| CACATCTCCATTTGACCAGT+CGG | + | chr3_3:80417086-80417105 | None:intergenic | 45.0% | |
| ACTGTGCAACATGTCGAGAA+TGG | - | chr3_3:80417142-80417161 | Msa0476580:intron | 45.0% | |
| CTGTGCAACATGTCGAGAAT+GGG | - | chr3_3:80417143-80417162 | Msa0476580:intron | 45.0% | |
| GAATTGCCAGTGAGATGAAC+CGG | - | chr3_3:80417203-80417222 | Msa0476580:intron | 45.0% | |
| !! | TTTTAGCCGGTTCATCTCAC+TGG | + | chr3_3:80417212-80417231 | None:intergenic | 45.0% |
| CTACTGTCTGTGTTCACTGT+TGG | - | chr3_3:80417629-80417648 | Msa0476580:intron | 45.0% | |
| CAGAGTGCGAAAGTCTAGAA+AGG | - | chr3_3:80417695-80417714 | Msa0476580:intron | 45.0% | |
| AGGGAACTATTGTGTGTGTG+TGG | - | chr3_3:80417715-80417734 | Msa0476580:intron | 45.0% | |
| TGTGTGTGTGTGGTTCATGT+TGG | - | chr3_3:80417725-80417744 | Msa0476580:intron | 45.0% | |
| GAATAAACTTGGAACCGACC+AGG | - | chr3_3:80417785-80417804 | Msa0476580:intron | 45.0% | |
| TAACATGGACCTCCCAAAGA+TGG | - | chr3_3:80417912-80417931 | Msa0476580:intron | 45.0% | |
| !! | GTTCGCTTTTGGACCATCTT+TGG | + | chr3_3:80417928-80417947 | None:intergenic | 45.0% |
| AGAAGGACTAAGGAATGCCT+CGG | + | chr3_3:80418687-80418706 | None:intergenic | 45.0% | |
| AGGCATTCCTTAGTCCTTCT+TGG | - | chr3_3:80418687-80418706 | Msa0476580:intron | 45.0% | |
| GGCCAATTCAATCCTTAGAG+AGG | - | chr3_3:80418893-80418912 | Msa0476580:intron | 45.0% | |
| GCTATTCAGAAGGGAAAACC+AGG | - | chr3_3:80418924-80418943 | Msa0476580:intron | 45.0% | |
| ! | AAACCAGGTGCATTTTCTCC+TGG | - | chr3_3:80418939-80418958 | Msa0476580:intron | 45.0% |
| ! | TTCAAGAACTCTGGTCTTCC+AGG | + | chr3_3:80418960-80418979 | None:intergenic | 45.0% |
| TTAGCAACAGCAGATCTGGA+CGG | + | chr3_3:80419224-80419243 | None:intergenic | 45.0% | |
| CGTCAATTGCCTTAGGTTTC+AGG | - | chr3_3:80419390-80419409 | Msa0476580:intron | 45.0% | |
| ! | TGGAGAGTTTGAGATTGTGC+TGG | - | chr3_3:80419530-80419549 | Msa0476580:intron | 45.0% |
| TAGAAAGAAGCTGCAAGGAG+AGG | + | chr3_3:80419600-80419619 | None:intergenic | 45.0% | |
| TCTCCTTGCAGCTTCTTTCT+AGG | - | chr3_3:80419599-80419618 | Msa0476580:intron | 45.0% | |
| TGACCTAGAAAGAAGCTGCA+AGG | + | chr3_3:80419605-80419624 | None:intergenic | 45.0% | |
| !! | TGTCATCTGTACTGACTGCA+TGG | - | chr3_3:80419717-80419736 | Msa0476580:intron | 45.0% |
| TGTTTGGAGGATCATGTTCG+TGG | - | chr3_3:80420092-80420111 | Msa0476580:intron | 45.0% | |
| !! | TGCTCTGCCTTACTGATTCA+AGG | + | chr3_3:80420169-80420188 | None:intergenic | 45.0% |
| TCTGGTGGAAAAATCAGTCG+AGG | - | chr3_3:80420253-80420272 | Msa0476580:CDS | 45.0% | |
| GTGGAAAAATCAGTCGAGGT+AGG | - | chr3_3:80420257-80420276 | Msa0476580:CDS | 45.0% | |
| ! | ACAAGTTGGAAGGGAAATGG+GGG | + | chr3_3:80420387-80420406 | None:intergenic | 45.0% |
| CAGGACTTGAGACAGATGAA+GGG | - | chr3_3:80420434-80420453 | Msa0476580:CDS | 45.0% | |
| AGGACTTGAGACAGATGAAG+GGG | - | chr3_3:80420435-80420454 | Msa0476580:CDS | 45.0% | |
| AGGCAATCACCATATGTTGC+TGG | - | chr3_3:80420500-80420519 | Msa0476580:intron | 45.0% | |
| !!! | TTTTTTGTGCCTCGTGCATG+GGG | + | chr3_3:80420905-80420924 | None:intergenic | 45.0% |
| !!! | CTTTTTTGTGCCTCGTGCAT+GGG | + | chr3_3:80420906-80420925 | None:intergenic | 45.0% |
| ATTCACCGATAACCATGGGA+CGG | - | chr3_3:80420928-80420947 | Msa0476580:intron | 45.0% | |
| AAATGGAGTAGGAGCTAGAG+GGG | - | chr3_3:80420997-80421016 | Msa0476580:intron | 45.0% | |
| GGCAGTCGATATGCAATCTA+CGG | - | chr3_3:80421018-80421037 | Msa0476580:intron | 45.0% | |
| GCAGTCGATATGCAATCTAC+GGG | - | chr3_3:80421019-80421038 | Msa0476580:intron | 45.0% | |
| !! | TAGCTTGTTAGTTAGAGGCC+AGG | - | chr3_3:80421765-80421784 | Msa0476580:intron | 45.0% |
| !! | AGCTTGTTAGTTAGAGGCCA+GGG | - | chr3_3:80421766-80421785 | Msa0476580:intron | 45.0% |
| !!! | TAGCTTTTGAGTTAGAGGCC+AGG | - | chr3_3:80421950-80421969 | Msa0476580:intron | 45.0% |
| !!! | AGCTTTTGAGTTAGAGGCCA+GGG | - | chr3_3:80421951-80421970 | Msa0476580:intron | 45.0% |
| ! | ATCCAATCTGATATGGTGGG+TGG | - | chr3_3:80421995-80422014 | Msa0476580:intron | 45.0% |
| GCAGCTGTTCCTTGATATTC+AGG | - | chr3_3:80422539-80422558 | Msa0476580:CDS | 45.0% | |
| CACATGCAACATGCAAGACA+TGG | - | chr3_3:80422577-80422596 | Msa0476580:CDS | 45.0% | |
| AGAGATTACAGGCATACTCC+TGG | + | chr3_3:80422696-80422715 | None:intergenic | 45.0% | |
| TGGTTCATTATGGCAGTGTG+TGG | - | chr3_3:80422753-80422772 | Msa0476580:CDS | 45.0% | |
| !! | TTATTATAATAAATAAAAAG+GGG | - | chr3_3:80417977-80417996 | Msa0476580:intron | 5.0% |
| !! | TATAATTTATTACTAATATA+GGG | + | chr3_3:80420809-80420828 | None:intergenic | 5.0% |
| !! | ATATAATTTATTACTAATAT+AGG | + | chr3_3:80420810-80420829 | None:intergenic | 5.0% |
| !!! | ATAAATTTTATTTCTAATAT+AGG | + | chr3_3:80421890-80421909 | None:intergenic | 5.0% |
| GGTCTGTGATGCGCTAGTAT+AGG | + | chr3_3:80415869-80415888 | None:intergenic | 50.0% | |
| ! | GTTCGGGTTTGAACCAGAGA+GGG | + | chr3_3:80415913-80415932 | None:intergenic | 50.0% |
| TCGAAGTTAGGGGAGAGGAA+GGG | + | chr3_3:80415935-80415954 | None:intergenic | 50.0% | |
| ATCGAAGTTAGGGGAGAGGA+AGG | + | chr3_3:80415936-80415955 | None:intergenic | 50.0% | |
| TGTGGAAGGGAACGAAGGTT+GGG | + | chr3_3:80415982-80416001 | None:intergenic | 50.0% | |
| ! | TGAGAACGGAGAGTGTGGAA+GGG | + | chr3_3:80415995-80416014 | None:intergenic | 50.0% |
| ! | TTGAGAACGGAGAGTGTGGA+AGG | + | chr3_3:80415996-80416015 | None:intergenic | 50.0% |
| ! | TGAGTTGAGAACGGAGAGTG+TGG | + | chr3_3:80416000-80416019 | None:intergenic | 50.0% |
| TGTTGATGTGGATGACGCTG+TGG | - | chr3_3:80416105-80416124 | Msa0476580:intron | 50.0% | |
| TTGTCTCTCAGCTCGACAAG+CGG | + | chr3_3:80416145-80416164 | None:intergenic | 50.0% | |
| TGCTTCCGCTAGAGAGACTT+TGG | - | chr3_3:80416240-80416259 | Msa0476580:CDS | 50.0% | |
| AACCTTCGGGGTGAGATGAA+AGG | - | chr3_3:80416993-80417012 | Msa0476580:intron | 50.0% | |
| TGCCTAGTATAGACTCCGAC+TGG | - | chr3_3:80417068-80417087 | Msa0476580:intron | 50.0% | |
| GACCAGTCGGAGTCTATACT+AGG | + | chr3_3:80417073-80417092 | None:intergenic | 50.0% | |
| GTCGAGAATGGGACAAGTCT+CGG | - | chr3_3:80417154-80417173 | Msa0476580:intron | 50.0% | |
| AGAGACTCAAAGCATGCTGC+TGG | - | chr3_3:80417177-80417196 | Msa0476580:intron | 50.0% | |
| ! | GTTTGCTGAAGCTTGGTGAG+AGG | - | chr3_3:80417375-80417394 | Msa0476580:intron | 50.0% |
| GATTAAGGACCTTCAGCGAC+TGG | + | chr3_3:80417610-80417629 | None:intergenic | 50.0% | |
| ! | GCTTTTGGACCATCTTTGGG+AGG | + | chr3_3:80417924-80417943 | None:intergenic | 50.0% |
| ! | CAGCTGATGATGACCCATGT+GGG | + | chr3_3:80418464-80418483 | None:intergenic | 50.0% |
| ACATGGGTCATCATCAGCTG+CGG | - | chr3_3:80418464-80418483 | Msa0476580:intron | 50.0% | |
| CTGCTGGATCATCTGAGGAT+GGG | - | chr3_3:80418487-80418506 | Msa0476580:CDS | 50.0% | |
| CTTCCAGGAGAAAATGCACC+TGG | + | chr3_3:80418945-80418964 | None:intergenic | 50.0% | |
| ! | ATTTTGAACGGGGACAGGAC+TGG | + | chr3_3:80419452-80419471 | None:intergenic | 50.0% |
| GGAGAGGCGAAGGAATTTGT+CGG | + | chr3_3:80419584-80419603 | None:intergenic | 50.0% | |
| !! | ATAACACAAGCACCGGCACT+GGG | - | chr3_3:80419747-80419766 | Msa0476580:CDS | 50.0% |
| AAGTTGGAAGGGAAATGGGG+GGG | + | chr3_3:80420385-80420404 | None:intergenic | 50.0% | |
| ! | CAAGTTGGAAGGGAAATGGG+GGG | + | chr3_3:80420386-80420405 | None:intergenic | 50.0% |
| CCTTCATCTGTCTCAAGTCC+TGG | + | chr3_3:80420436-80420455 | None:intergenic | 50.0% | |
| CCAGGACTTGAGACAGATGA+AGG | - | chr3_3:80420433-80420452 | Msa0476580:CDS | 50.0% | |
| GGTGATTGCCTAACAGGTAG+AGG | + | chr3_3:80420491-80420510 | None:intergenic | 50.0% | |
| ATGGGGATGAGTGGGGAAAA+AGG | + | chr3_3:80420888-80420907 | None:intergenic | 50.0% | |
| !!! | CCTTTTTTGTGCCTCGTGCA+TGG | + | chr3_3:80420907-80420926 | None:intergenic | 50.0% |
| CCATGCACGAGGCACAAAAA+AGG | - | chr3_3:80420904-80420923 | Msa0476580:intron | 50.0% | |
| CATGGCATTAAACCGTCCCA+TGG | + | chr3_3:80420943-80420962 | None:intergenic | 50.0% | |
| TGAACTGTTGGAAGTCCGAC+AGG | - | chr3_3:80421655-80421674 | Msa0476580:CDS | 50.0% | |
| TCACTGCTTCTGTGAGCCAT+TGG | - | chr3_3:80421695-80421714 | Msa0476580:intron | 50.0% | |
| GGGTTGAAATGTGAGGCCAA+TGG | + | chr3_3:80421714-80421733 | None:intergenic | 50.0% | |
| TTGTTAGTTAGAGGCCAGGG+TGG | - | chr3_3:80421769-80421788 | Msa0476580:intron | 50.0% | |
| TGTTAGTTAGAGGCCAGGGT+GGG | - | chr3_3:80421770-80421789 | Msa0476580:intron | 50.0% | |
| ATGAGTGTAGTTTCCCACCC+TGG | + | chr3_3:80421786-80421805 | None:intergenic | 50.0% | |
| TCTGCATGAGTGTAGTTCCC+TGG | + | chr3_3:80421971-80421990 | None:intergenic | 50.0% | |
| TGCCACCCACCATATCAGAT+TGG | + | chr3_3:80422000-80422019 | None:intergenic | 50.0% | |
| ! | TGGTGACATGCAGGCGTTTT+TGG | - | chr3_3:80422210-80422229 | Msa0476580:intron | 50.0% |
| ! | GGTGACATGCAGGCGTTTTT+GGG | - | chr3_3:80422211-80422230 | Msa0476580:intron | 50.0% |
| !!! | ACATGCAGGCGTTTTTGGGT+GGG | - | chr3_3:80422215-80422234 | Msa0476580:intron | 50.0% |
| AGAGTTCACTGAGACGAGCA+GGG | - | chr3_3:80422463-80422482 | Msa0476580:CDS | 50.0% | |
| CAGCTGCATACGCATTCTGT+CGG | + | chr3_3:80422526-80422545 | None:intergenic | 50.0% | |
| GGTGACAATACGCAAGATGG+AGG | + | chr3_3:80422675-80422694 | None:intergenic | 50.0% | |
| CCTGGTGACAATACGCAAGA+TGG | + | chr3_3:80422678-80422697 | None:intergenic | 50.0% | |
| CCATCTTGCGTATTGTCACC+AGG | - | chr3_3:80422675-80422694 | Msa0476580:CDS | 50.0% | |
| CCTGTAATCTCTCTGCGCTA+GGG | - | chr3_3:80422704-80422723 | Msa0476580:CDS | 50.0% | |
| CTGTAATCTCTCTGCGCTAG+GGG | - | chr3_3:80422705-80422724 | Msa0476580:CDS | 50.0% | |
| ATGGAGTAGATGCGGCATGT+AGG | - | chr3_3:80422823-80422842 | Msa0476580:CDS | 50.0% | |
| TCGGAGAAGAGGTTCGTGGT+GGG | + | chr3_3:80415890-80415909 | None:intergenic | 55.0% | |
| GGGTTTGAACCAGAGAGGGT+CGG | + | chr3_3:80415909-80415928 | None:intergenic | 55.0% | |
| ! | GGTTCGGGTTTGAACCAGAG+AGG | + | chr3_3:80415914-80415933 | None:intergenic | 55.0% |
| TTAGGGGAGAGGAAGGGTTC+GGG | + | chr3_3:80415929-80415948 | None:intergenic | 55.0% | |
| GTTAGGGGAGAGGAAGGGTT+CGG | + | chr3_3:80415930-80415949 | None:intergenic | 55.0% | |
| CGGAATCGAAGTTAGGGGAG+AGG | + | chr3_3:80415940-80415959 | None:intergenic | 55.0% | |
| GGGAACGAAGGTTGGGAGTT+GGG | + | chr3_3:80415975-80415994 | None:intergenic | 55.0% | |
| AGGGAACGAAGGTTGGGAGT+TGG | + | chr3_3:80415976-80415995 | None:intergenic | 55.0% | |
| GTGTGGAAGGGAACGAAGGT+TGG | + | chr3_3:80415983-80416002 | None:intergenic | 55.0% | |
| ! | GAGAGTGTGGAAGGGAACGA+AGG | + | chr3_3:80415987-80416006 | None:intergenic | 55.0% |
| TGTCTCTCAGCTCGACAAGC+GGG | + | chr3_3:80416144-80416163 | None:intergenic | 55.0% | |
| TGCCTTTCATCTCACCCCGA+AGG | + | chr3_3:80416998-80417017 | None:intergenic | 55.0% | |
| ! | CGGGGTGAGATGAAAGGCAT+TGG | - | chr3_3:80416999-80417018 | Msa0476580:intron | 55.0% |
| ! | TGAAGCTTGGTGAGAGGCCA+AGG | - | chr3_3:80417381-80417400 | Msa0476580:intron | 55.0% |
| ! | GAAGCTTGGTGAGAGGCCAA+GGG | - | chr3_3:80417382-80417401 | Msa0476580:intron | 55.0% |
| ! | GCAGCTGATGATGACCCATG+TGG | + | chr3_3:80418465-80418484 | None:intergenic | 55.0% |
| GCTGCTGGATCATCTGAGGA+TGG | - | chr3_3:80418486-80418505 | Msa0476580:CDS | 55.0% | |
| AAGGAATGCCTCGGCAAGGA+CGG | + | chr3_3:80418678-80418697 | None:intergenic | 55.0% | |
| GACTAAGGAATGCCTCGGCA+AGG | + | chr3_3:80418682-80418701 | None:intergenic | 55.0% | |
| !! | CATAACACAAGCACCGGCAC+TGG | - | chr3_3:80419746-80419765 | Msa0476580:CDS | 55.0% |
| ! | CAAAGCAGTGGTGGAGTCTC+TGG | - | chr3_3:80420235-80420254 | Msa0476580:CDS | 55.0% |
| !! | GACATGCAGGCGTTTTTGGG+TGG | - | chr3_3:80422214-80422233 | Msa0476580:intron | 55.0% |
| !!! | CATGCAGGCGTTTTTGGGTG+GGG | - | chr3_3:80422216-80422235 | Msa0476580:intron | 55.0% |
| AGCTGCCGACCTTGTTACTG+TGG | - | chr3_3:80422324-80422343 | Msa0476580:intron | 55.0% | |
| CAGAGTTCACTGAGACGAGC+AGG | - | chr3_3:80422462-80422481 | Msa0476580:CDS | 55.0% | |
| GAGTTCACTGAGACGAGCAG+GGG | - | chr3_3:80422464-80422483 | Msa0476580:CDS | 55.0% | |
| GCCTGTAATCTCTCTGCGCT+AGG | - | chr3_3:80422703-80422722 | Msa0476580:CDS | 55.0% | |
| CCCTAGCGCAGAGAGATTAC+AGG | + | chr3_3:80422707-80422726 | None:intergenic | 55.0% | |
| GTCGGAGAAGAGGTTCGTGG+TGG | + | chr3_3:80415891-80415910 | None:intergenic | 60.0% | |
| AGGGTCGGAGAAGAGGTTCG+TGG | + | chr3_3:80415894-80415913 | None:intergenic | 60.0% | |
| ACCTCTTCTCCGACCCTCTC+TGG | - | chr3_3:80415897-80415916 | Msa0476580:three_prime_UTR | 60.0% | |
| ACCAGAGAGGGTCGGAGAAG+AGG | + | chr3_3:80415901-80415920 | None:intergenic | 60.0% | |
| GTCTCTCAGCTCGACAAGCG+GGG | + | chr3_3:80416143-80416162 | None:intergenic | 60.0% | |
| TCATCATCAGCTGCGGCTGC+TGG | - | chr3_3:80418471-80418490 | Msa0476580:intron | 60.0% | |
| TGCGGCTGCTGGATCATCTG+AGG | - | chr3_3:80418482-80418501 | Msa0476580:CDS | 60.0% | |
| AACCATGTCCGTCCTTGCCG+AGG | - | chr3_3:80418667-80418686 | Msa0476580:intron | 60.0% | |
| GAAGCTGCAAGGAGAGGCGA+AGG | + | chr3_3:80419594-80419613 | None:intergenic | 60.0% | |
| ! | AGCAGTGGTGGAGTCTCTGG+TGG | - | chr3_3:80420238-80420257 | Msa0476580:CDS | 60.0% |
| CTCGTGCATGGGGATGAGTG+GGG | + | chr3_3:80420895-80420914 | None:intergenic | 60.0% | |
| CCTCGTGCATGGGGATGAGT+GGG | + | chr3_3:80420896-80420915 | None:intergenic | 60.0% | |
| AGACGAGCAGGGGCAAGTTC+AGG | - | chr3_3:80422474-80422493 | Msa0476580:CDS | 60.0% | |
| TCTCTCTGCGCTAGGGGTTG+AGG | - | chr3_3:80422711-80422730 | Msa0476580:CDS | 60.0% | |
| TGCCTCGGCAAGGACGGACA+TGG | + | chr3_3:80418672-80418691 | None:intergenic | 65.0% | |
| GGACGGACAGCAGCCTTGCA+TGG | + | chr3_3:80419207-80419226 | None:intergenic | 65.0% | |
| ATCCCATCCACGCCCAGTGC+CGG | + | chr3_3:80419762-80419781 | None:intergenic | 65.0% | |
| CCCACTCATCCCCATGCACG+AGG | - | chr3_3:80420893-80420912 | Msa0476580:intron | 65.0% | |
| GCCTCGTGCATGGGGATGAG+TGG | + | chr3_3:80420897-80420916 | None:intergenic | 65.0% | |
| !! | ACAAGCACCGGCACTGGGCG+TGG | - | chr3_3:80419752-80419771 | Msa0476580:CDS | 70.0% |
| ! | CACCGGCACTGGGCGTGGAT+GGG | - | chr3_3:80419757-80419776 | Msa0476580:CDS | 70.0% |
| ! | GCACCGGCACTGGGCGTGGA+TGG | - | chr3_3:80419756-80419775 | Msa0476580:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 80415743 | 80423011 | 80415743 | ID=Msa0476580;Name=Msa0476580 |
| chr3_3 | mRNA | 80415743 | 80423011 | 80415743 | ID=Msa0476580-mRNA-1;Parent=Msa0476580;Name=Msa0476580-mRNA-1;_AED=0.17;_eAED=0.17;_QI=114|0.84|0.92|0.92|0.92|0.92|14|181|770 |
| chr3_3 | exon | 80415743 | 80415781 | 80415743 | ID=Msa0476580-mRNA-1:exon:22045;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80415805 | 80416057 | 80415805 | ID=Msa0476580-mRNA-1:exon:22044;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80416194 | 80416328 | 80416194 | ID=Msa0476580-mRNA-1:exon:22043;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80416409 | 80416531 | 80416409 | ID=Msa0476580-mRNA-1:exon:22042;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80418213 | 80418317 | 80418213 | ID=Msa0476580-mRNA-1:exon:22041;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80418480 | 80418680 | 80418480 | ID=Msa0476580-mRNA-1:exon:22040;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80418943 | 80419051 | 80418943 | ID=Msa0476580-mRNA-1:exon:22039;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80419134 | 80419349 | 80419134 | ID=Msa0476580-mRNA-1:exon:22038;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80419436 | 80419541 | 80419436 | ID=Msa0476580-mRNA-1:exon:22037;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80419734 | 80419892 | 80419734 | ID=Msa0476580-mRNA-1:exon:22036;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80420169 | 80420513 | 80420169 | ID=Msa0476580-mRNA-1:exon:22035;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80421025 | 80421079 | 80421025 | ID=Msa0476580-mRNA-1:exon:22034;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80421502 | 80421708 | 80421502 | ID=Msa0476580-mRNA-1:exon:22033;Parent=Msa0476580-mRNA-1 |
| chr3_3 | exon | 80422457 | 80423011 | 80422457 | ID=Msa0476580-mRNA-1:exon:22032;Parent=Msa0476580-mRNA-1 |
| chr3_3 | five_prime_UTR | 80422898 | 80423011 | 80422898 | ID=Msa0476580-mRNA-1:five_prime_utr;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80422457 | 80422897 | 80422457 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80421502 | 80421708 | 80421502 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80421025 | 80421079 | 80421025 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80420169 | 80420513 | 80420169 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80419734 | 80419892 | 80419734 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80419436 | 80419541 | 80419436 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80419134 | 80419349 | 80419134 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80418943 | 80419051 | 80418943 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80418480 | 80418680 | 80418480 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80418213 | 80418317 | 80418213 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80416409 | 80416531 | 80416409 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80416194 | 80416328 | 80416194 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | CDS | 80415947 | 80416057 | 80415947 | ID=Msa0476580-mRNA-1:cds;Parent=Msa0476580-mRNA-1 |
| chr3_3 | three_prime_UTR | 80415805 | 80415946 | 80415805 | ID=Msa0476580-mRNA-1:three_prime_utr;Parent=Msa0476580-mRNA-1 |
| chr3_3 | three_prime_UTR | 80415743 | 80415781 | 80415743 | ID=Msa0476580-mRNA-1:three_prime_utr;Parent=Msa0476580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
