AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0432180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0432180 MtrunA17_Chr3g0137101 97.970 542 8 1 1 539 1 542 0.0 1097
Msa0432180 MtrunA17_Chr1g0149841 53.783 489 165 12 6 480 3 444 3.12e-150 440
Msa0432180 MtrunA17_Chr2g0304841 46.507 501 220 10 6 480 16 494 1.36e-127 388
Msa0432180 MtrunA17_Chr1g0149851 52.144 443 154 14 6 410 3 425 3.86e-125 377
Msa0432180 MtrunA17_Chr7g0275891 56.497 354 106 7 5 335 2 330 4.65e-115 344
Msa0432180 MtrunA17_Chr2g0294911 48.767 365 137 8 6 354 27 357 2.20e-101 318
Msa0432180 MtrunA17_Chr4g0067981 57.934 271 85 3 3 260 26 280 1.30e-99 315
Msa0432180 MtrunA17_Chr4g0074411 41.532 496 261 10 2 486 12 489 1.09e-98 311
Msa0432180 MtrunA17_Chr1g0161431 55.369 298 108 5 4 283 7 297 3.22e-98 310
Msa0432180 MtrunA17_Chr7g0275401 53.722 309 114 5 6 312 3 284 9.39e-97 295
Msa0432180 MtrunA17_Chr4g0074401 50.920 326 147 3 8 325 17 337 5.64e-94 298
Msa0432180 MtrunA17_Chr3g0123131 52.961 304 113 5 8 307 13 290 9.89e-92 291
Msa0432180 MtrunA17_Chr8g0376881 56.981 265 95 4 6 262 23 276 2.05e-90 287
Msa0432180 MtrunA17_Chr3g0134461 62.449 245 38 2 1 244 1 192 2.02e-84 260
Msa0432180 MtrunA17_Chr1g0149831 65.152 198 63 3 67 263 1 193 3.32e-76 240
Msa0432180 MtrunA17_Chr3g0134481 83.459 133 22 0 1 133 1 133 2.65e-69 221
Msa0432180 MtrunA17_Chr3g0134481 73.585 53 14 0 194 246 131 183 8.26e-21 90.5
Msa0432180 MtrunA17_Chr4g0074421 57.292 192 76 2 58 249 2 187 2.27e-63 206
Msa0432180 MtrunA17_Chr4g0009851 41.767 249 116 4 3 251 6 225 9.99e-54 184
Msa0432180 MtrunA17_Chr4g0009901 40.000 245 118 3 8 252 10 225 1.08e-48 169
Msa0432180 MtrunA17_Chr4g0009981 40.704 199 90 3 53 251 2 172 9.39e-40 145
Msa0432180 MtrunA17_Chr6g0471041 36.508 252 129 5 1 251 7 228 5.72e-39 147
Msa0432180 MtrunA17_Chr8g0391911 35.019 257 150 5 5 254 6 252 6.63e-35 132
Msa0432180 MtrunA17_Chr8g0350761 28.854 253 163 5 11 247 20 271 1.43e-25 109
Msa0432180 MtrunA17_Chr6g0473731 36.527 167 82 4 88 253 10 153 7.54e-25 107
Msa0432180 MtrunA17_Chr3g0127941 37.302 126 74 2 12 133 56 180 5.17e-23 103
Msa0432180 MtrunA17_Chr6g0456631 34.868 152 95 4 5 154 6 155 1.05e-22 95.1
Msa0432180 MtrunA17_Chr4g0011071 33.537 164 81 3 58 221 39 174 1.24e-22 95.1
Msa0432180 MtrunA17_Chr4g0031961 42.400 125 71 1 139 262 74 198 1.57e-22 98.6
Msa0432180 MtrunA17_Chr8g0383961 35.099 151 98 0 1 151 7 157 3.20e-22 96.3
Msa0432180 MtrunA17_Chr6g0469321 66.667 75 24 1 211 284 70 144 8.09e-22 92.8
Msa0432180 MtrunA17_Chr7g0276361 33.962 159 94 3 1 151 1 156 8.83e-22 99.4
Msa0432180 MtrunA17_Chr1g0181811 37.705 122 73 2 12 130 85 206 1.35e-21 99.0
Msa0432180 MtrunA17_Chr4g0030271 39.344 122 71 1 12 130 89 210 1.50e-21 99.0
Msa0432180 MtrunA17_Chr7g0255711 56.000 75 32 1 183 256 78 152 4.36e-21 94.0
Msa0432180 MtrunA17_Chr4g0009991 36.552 145 63 2 100 244 1 116 3.88e-20 86.3
Msa0432180 MtrunA17_Chr8g0345901 38.333 120 71 1 14 130 38 157 5.03e-20 94.0
Msa0432180 MtrunA17_Chr3g0091641 34.677 124 78 1 12 132 24 147 1.23e-19 92.4
Msa0432180 MtrunA17_Chr4g0061021 33.582 134 84 2 4 132 23 156 4.76e-18 87.4
Msa0432180 MtrunA17_Chr2g0324891 45.455 88 48 0 175 262 141 228 7.40e-18 85.9
Msa0432180 MtrunA17_Chr5g0400241 56.061 66 29 0 188 253 304 369 9.17e-18 86.7
Msa0432180 MtrunA17_Chr5g0400241 37.097 124 74 2 8 130 14 134 1.00e-13 73.9
Msa0432180 MtrunA17_Chr4g0040481 50.685 73 36 0 190 262 153 225 9.45e-18 85.9
Msa0432180 MtrunA17_Chr4g0054981 60.656 61 24 0 193 253 308 368 3.02e-17 84.7
Msa0432180 MtrunA17_Chr4g0054981 33.065 124 79 2 8 130 14 134 3.45e-12 68.9
Msa0432180 MtrunA17_Chr5g0423031 38.000 100 56 3 8 106 10 104 1.62e-14 72.0
Msa0432180 MtrunA17_Chr4g0010001 39.506 81 48 1 8 88 10 89 5.49e-14 67.8
Msa0432180 MtrunA17_Chr5g0402631 39.200 125 64 5 194 315 213 328 7.62e-14 73.2
Msa0432180 MtrunA17_Chr1g0198601 45.679 81 42 2 188 266 204 284 1.22e-13 72.8
Msa0432180 MtrunA17_Chr7g0274471 62.500 56 20 1 193 247 216 271 2.82e-13 72.0
Msa0432180 MtrunA17_Chr1g0190301 56.897 58 24 1 191 247 171 228 7.89e-13 70.1
Msa0432180 MtrunA17_Chr4g0045361 38.318 107 50 3 194 295 273 368 1.23e-12 69.7
Msa0432180 MtrunA17_Chr5g0422621 40.230 87 50 2 182 267 186 271 1.30e-12 69.3
Msa0432180 MtrunA17_Chr7g0261911 53.968 63 28 1 191 252 258 320 2.07e-12 69.3
Msa0432180 MtrunA17_Chr3g0134471 50.000 66 9 1 243 308 4 45 6.77e-12 60.5
Msa0432180 MtrunA17_Chr5g0417521 50.847 59 28 1 191 248 11 69 1.23e-11 66.2
Msa0432180 MtrunA17_Chr4g0062921 48.387 62 31 1 194 254 234 295 3.75e-11 65.5
Msa0432180 MtrunA17_Chr6g0461641 49.153 59 29 1 191 248 38 96 5.31e-11 64.7
Msa0432180 MtrunA17_Chr2g0321461 49.153 59 29 1 191 248 41 99 5.32e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0432180 AT2G25180.1 52.425 433 158 11 6 416 11 417 2.23e-130 393
Msa0432180 AT4G31920.1 54.645 366 105 10 6 352 11 334 2.37e-111 342
Msa0432180 AT3G16857.1 55.755 278 100 5 6 263 31 305 2.66e-95 304
Msa0432180 AT3G16857.2 55.755 278 100 5 6 263 31 305 7.43e-95 303
Msa0432180 AT5G58080.1 49.444 360 152 8 2 346 8 352 4.05e-93 297
Msa0432180 AT2G01760.1 56.154 260 108 3 6 259 5 264 7.66e-87 273
Msa0432180 AT1G67710.1 58.233 249 96 4 9 253 8 252 3.15e-83 268
Msa0432180 AT2G01760.2 50.694 288 108 4 6 259 5 292 9.31e-81 258
Msa0432180 AT3G16857.3 55.274 237 83 5 47 263 2 235 1.48e-75 251
Msa0432180 AT2G01760.3 54.271 199 85 3 67 259 1 199 9.21e-57 192
Msa0432180 AT1G67710.2 58.115 191 72 4 67 253 1 187 2.77e-56 195
Msa0432180 AT5G49240.1 40.586 239 136 2 8 244 38 272 1.22e-52 181
Msa0432180 AT3G62670.1 37.500 272 144 6 2 264 31 285 7.24e-43 158
Msa0432180 AT1G67710.3 53.216 171 72 4 87 253 12 178 8.22e-42 156
Msa0432180 AT1G49190.1 35.156 256 148 6 7 252 29 276 1.14e-40 152
Msa0432180 AT5G07210.2 29.683 347 194 9 10 325 14 341 4.47e-35 139
Msa0432180 AT5G07210.1 29.014 355 194 10 10 325 14 349 1.44e-32 132
Msa0432180 AT2G27070.1 30.576 278 151 8 10 253 14 283 5.29e-29 121
Msa0432180 AT1G49190.2 34.868 152 88 1 7 147 29 180 9.41e-26 112
Msa0432180 AT2G46790.3 40.650 123 68 2 12 130 37 158 1.02e-24 107
Msa0432180 AT2G46790.1 40.650 123 68 2 12 130 37 158 1.20e-24 107
Msa0432180 AT5G24470.1 34.337 166 98 4 6 165 42 202 7.26e-24 105
Msa0432180 AT5G59570.2 55.172 87 36 2 177 260 120 206 3.80e-23 100
Msa0432180 AT5G59570.1 55.172 87 36 2 177 260 120 206 3.80e-23 100
Msa0432180 AT3G46640.2 52.381 84 40 0 179 262 128 211 1.01e-22 99.8
Msa0432180 AT3G46640.1 52.381 84 40 0 179 262 128 211 1.01e-22 99.8
Msa0432180 AT3G46640.3 53.086 81 38 0 179 259 128 208 1.36e-22 99.4
Msa0432180 AT1G68210.1 28.148 270 166 6 12 254 13 281 8.46e-22 100
Msa0432180 AT5G60100.7 37.795 127 75 2 8 130 59 185 1.09e-21 97.8
Msa0432180 AT5G60100.6 37.795 127 75 2 8 130 59 185 1.09e-21 97.8
Msa0432180 AT5G60100.4 37.795 127 75 2 8 130 59 185 1.09e-21 97.8
Msa0432180 AT5G60100.5 37.795 127 75 2 8 130 59 185 1.55e-21 98.2
Msa0432180 AT5G60100.3 37.795 127 75 2 8 130 59 185 1.55e-21 98.2
Msa0432180 AT5G60100.1 37.795 127 75 2 8 130 59 185 1.55e-21 98.2
Msa0432180 AT5G60100.2 37.795 127 75 2 8 130 59 185 3.34e-21 97.4
Msa0432180 AT2G40970.1 60.606 66 26 0 188 253 98 163 8.16e-21 92.4
Msa0432180 AT5G02810.1 38.525 122 72 1 12 130 78 199 1.07e-20 96.7
Msa0432180 AT5G05090.1 65.000 60 21 0 194 253 80 139 1.25e-20 92.4
Msa0432180 AT3G10760.1 65.000 60 21 0 194 253 104 163 1.26e-20 93.6
Msa0432180 AT5G44190.2 59.155 71 29 0 193 263 145 215 3.71e-20 92.4
Msa0432180 AT5G44190.1 59.155 71 29 0 193 263 145 215 4.88e-20 92.8
Msa0432180 AT5G61380.1 34.677 124 78 1 12 132 19 142 4.31e-19 91.3
Msa0432180 AT2G20570.1 40.000 120 64 2 138 253 96 211 1.19e-17 85.9
Msa0432180 AT4G18020.8 41.748 103 53 1 158 253 252 354 2.38e-16 82.4
Msa0432180 AT4G18020.8 34.559 136 80 3 6 134 12 145 1.72e-13 73.2
Msa0432180 AT4G18020.11 41.748 103 53 1 158 253 252 354 2.38e-16 82.4
Msa0432180 AT4G18020.11 34.559 136 80 3 6 134 12 145 1.72e-13 73.2
Msa0432180 AT4G18020.4 41.748 103 53 1 158 253 252 354 2.38e-16 82.4
Msa0432180 AT4G18020.4 34.559 136 80 3 6 134 12 145 1.72e-13 73.2
Msa0432180 AT4G18020.5 41.748 103 53 1 158 253 252 354 2.38e-16 82.4
Msa0432180 AT4G18020.5 34.559 136 80 3 6 134 12 145 1.72e-13 73.2
Msa0432180 AT4G18020.10 41.748 103 53 1 158 253 252 354 2.38e-16 82.4
Msa0432180 AT4G18020.10 34.559 136 80 3 6 134 12 145 1.72e-13 73.2
Msa0432180 AT4G18020.7 41.748 103 53 1 158 253 252 354 2.38e-16 82.4
Msa0432180 AT4G18020.7 34.559 136 80 3 6 134 12 145 1.72e-13 73.2
Msa0432180 AT4G18020.3 41.748 103 53 1 158 253 252 354 2.63e-16 82.4
Msa0432180 AT4G18020.3 34.559 136 80 3 6 134 12 145 2.48e-13 72.8
Msa0432180 AT4G18020.2 41.748 103 53 1 158 253 252 354 2.63e-16 82.4
Msa0432180 AT4G18020.2 34.559 136 80 3 6 134 12 145 2.48e-13 72.8
Msa0432180 AT4G18020.1 41.748 103 53 1 158 253 252 354 2.63e-16 82.4
Msa0432180 AT4G18020.1 34.559 136 80 3 6 134 12 145 2.48e-13 72.8
Msa0432180 AT4G18020.6 41.748 103 53 1 158 253 252 354 2.63e-16 82.4
Msa0432180 AT4G18020.6 34.559 136 80 3 6 134 12 145 2.48e-13 72.8
Msa0432180 AT4G18020.9 41.748 103 53 1 158 253 252 354 2.63e-16 82.4
Msa0432180 AT4G18020.9 34.559 136 80 3 6 134 12 145 2.48e-13 72.8
Msa0432180 AT2G20570.2 61.404 57 22 0 197 253 171 227 5.46e-16 80.9
Msa0432180 AT1G68670.1 31.818 154 90 4 178 330 198 337 6.93e-13 70.5
Msa0432180 AT4G00760.1 28.079 203 121 7 30 212 1 198 1.29e-12 69.7
Msa0432180 AT4G13640.2 42.708 96 39 3 195 279 37 127 2.36e-12 68.2
Msa0432180 AT4G13640.1 42.708 96 39 3 195 279 37 127 2.49e-12 68.2
Msa0432180 AT1G49560.1 38.182 110 61 3 192 295 189 297 6.56e-12 67.4
Msa0432180 AT1G59940.1 32.298 161 95 4 14 161 35 194 9.79e-12 65.5
Msa0432180 AT3G24120.1 42.105 95 39 3 195 278 41 130 1.01e-11 66.2
Msa0432180 AT3G24120.2 42.105 95 39 3 195 278 41 130 1.01e-11 66.6
Msa0432180 AT1G25550.1 51.667 60 28 1 194 252 208 267 1.49e-11 66.2
Msa0432180 AT3G04030.1 50.847 59 28 1 191 248 41 99 2.53e-11 65.9
Msa0432180 AT3G04030.3 50.847 59 28 1 191 248 41 99 2.92e-11 65.9
Msa0432180 AT2G03500.1 46.875 64 33 1 192 254 230 293 3.49e-11 65.9
Msa0432180 AT4G37180.1 49.180 61 30 1 193 252 208 268 4.85e-11 65.1
Msa0432180 AT4G37180.2 49.180 61 30 1 193 252 215 275 5.88e-11 64.7
Msa0432180 AT1G10470.3 32.061 131 77 2 14 132 22 152 6.53e-11 63.2
Msa0432180 AT1G10470.1 32.061 131 77 2 14 132 36 166 7.97e-11 63.2

Find 185 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCATTAGTTTAATGTTTA+AGG 0.058899 3_2:-84338193 Msa0432180:three_prime_UTR
CGTTGATCCGGGAATTTATT+TGG 0.160454 3_2:+84339802 None:intergenic
GCAAGATAAGATGAAATTAT+TGG 0.247006 3_2:-84338502 Msa0432180:three_prime_UTR
TCCAACTTGTCTCATGGTTT+TGG 0.250920 3_2:-84342447 Msa0432180:CDS
TCAAGCGACGTGCCGTTATC+TGG 0.269805 3_2:-84339583 Msa0432180:CDS
ACATTTGGCAGCATGTAATT+AGG 0.295640 3_2:-84340951 Msa0432180:CDS
TATCTTTGTGACAGGAGTTT+TGG 0.297920 3_2:-84338443 Msa0432180:three_prime_UTR
TCCAGCATGCTTCATTTGTA+TGG 0.304531 3_2:+84339231 None:intergenic
ATTCCTTGGGAGTGCATATC+TGG 0.307526 3_2:+84339448 None:intergenic
TATTTGAGAATGGGTGGTTC+TGG 0.310707 3_2:-84340126 Msa0432180:CDS
TTGAAGAGAAAGAATTTGTT+TGG 0.311046 3_2:+84339557 None:intergenic
CGTTAATCAGAATATTCTTC+AGG 0.324708 3_2:-84339923 Msa0432180:CDS
TGAACTTGTGGGACTTGAAA+TGG 0.326717 3_2:-84341223 Msa0432180:CDS
GCTAGTATGGTGGCAGCCTT+AGG 0.331673 3_2:-84340165 Msa0432180:CDS
GCAGAAAATTCAGATGAAAA+TGG 0.333558 3_2:-84340838 Msa0432180:CDS
GTTTCCATATAATTATTTCT+TGG 0.335612 3_2:+84338030 None:intergenic
GTTGATCCGGGAATTTATTT+GGG 0.335841 3_2:+84339803 None:intergenic
TCCCATCCCAAATAAATTCC+CGG 0.335864 3_2:-84339809 Msa0432180:CDS
CCCTTGCAAGCGGGGTATCC+TGG 0.337535 3_2:-84339481 Msa0432180:CDS
AATTGTTTAAATTACGTGAT+TGG 0.348210 3_2:+84339986 None:intergenic
GCAAAACTTGGCCGTTGATC+CGG 0.363698 3_2:+84339790 None:intergenic
AACTCTCTTGCTCCAGTTAA+CGG 0.366243 3_2:-84339316 Msa0432180:three_prime_UTR
AGAAGAAGCCTCGGGTTGTT+TGG 0.367984 3_2:-84340729 Msa0432180:CDS
GCTACCAAGAAATAATTATA+TGG 0.369196 3_2:-84338034 Msa0432180:three_prime_UTR
TAGAGGAGCTAAAGAACATT+TGG 0.372140 3_2:-84340966 Msa0432180:CDS
CTGGAATTTAAGTTGATCAT+TGG 0.373200 3_2:+84339960 None:intergenic
TCCTTCGGGGCTTCTTCAGT+TGG 0.386130 3_2:-84340010 Msa0432180:CDS
CTGAAGAATATTCTGATTAA+CGG 0.389124 3_2:+84339924 None:intergenic
TCTTGGTTCACTGGAATACT+TGG 0.389557 3_2:-84339131 Msa0432180:three_prime_UTR
AACGGTAATTTGCCATTTCA+AGG 0.393348 3_2:-84339397 Msa0432180:CDS
CTGCCACCATACTAGCTTGT+TGG 0.395940 3_2:+84340172 None:intergenic
CGGTCTTCCCATCCTTGAAA+TGG 0.402240 3_2:+84339385 None:intergenic
GAAAGAAAACACGGAGGTAT+AGG 0.402851 3_2:-84339700 Msa0432180:CDS
GCTGAAACCTGTGAGATTAG+AGG 0.402851 3_2:-84340983 Msa0432180:CDS
AACACTCCAACTAGTCTTAA+CGG 0.404206 3_2:-84340045 Msa0432180:CDS
TTCTAATAATCTTGGTTCAC+TGG 0.404941 3_2:-84339140 Msa0432180:three_prime_UTR
ATTCTGATTAACGGGAGTTA+TGG 0.410279 3_2:+84339933 None:intergenic
TAATCTTTCGTTCTGACAGC+AGG 0.411338 3_2:+84338078 None:intergenic
CCTTCGGGGCTTCTTCAGTT+GGG 0.414763 3_2:-84340009 Msa0432180:CDS
CAAGATAAGATGAAATTATT+GGG 0.416183 3_2:-84338501 Msa0432180:three_prime_UTR
ATTTCAGTGTTGTCTGCATA+TGG 0.417968 3_2:-84341057 Msa0432180:intron
CACGCATTCCGATGGGAAAA+CGG 0.428750 3_2:+84342489 None:intergenic
TTGGTAGCAACAATCCCTTC+AGG 0.429338 3_2:+84338049 None:intergenic
GAAAACTCCTAGGACAAAAC+TGG 0.429891 3_2:+84338340 None:intergenic
AAGGTAGGCACGGTGATAAT+TGG 0.437512 3_2:-84339606 Msa0432180:CDS
CGAGGCTTCTTCTGAGCTGA+TGG 0.438400 3_2:+84340739 None:intergenic
AAACACGGAGGTATAGGAAT+AGG 0.439930 3_2:-84339694 Msa0432180:CDS
TGCAAACCAACAAGCTAGTA+TGG 0.442595 3_2:-84340178 Msa0432180:CDS
AGGTGGAGCTAGTTGTTGTC+TGG 0.446742 3_2:+84339275 None:intergenic
AGATCAATCTTATTTGAGAA+TGG 0.446802 3_2:-84340136 Msa0432180:CDS
GAACTAGAGGTGGCAAAACT+TGG 0.447157 3_2:+84339778 None:intergenic
GTTGCTGCTGTTAATCAGTT+AGG 0.449852 3_2:-84340682 Msa0432180:CDS
TGAAGAATATTCTGATTAAC+GGG 0.453613 3_2:+84339925 None:intergenic
GATCAATCTTATTTGAGAAT+GGG 0.453918 3_2:-84340135 Msa0432180:CDS
ATCCGGGAATTTATTTGGGA+TGG 0.454627 3_2:+84339807 None:intergenic
AGCTTAAATCCATCCATGTC+AGG 0.455967 3_2:+84341249 None:intergenic
GGTAAGTAGCATCCTGATTA+CGG 0.456384 3_2:+84339365 None:intergenic
GACTAAGAAAAGAAAGGATC+AGG 0.456770 3_2:-84340809 Msa0432180:CDS
GCTTCTTTGCCCTTGCAAGC+GGG 0.456904 3_2:-84339490 Msa0432180:CDS
GGAGGTATAGGAATAGGATA+TGG 0.457148 3_2:-84339688 Msa0432180:CDS
TGCTGGCTTATGATATTAGC+TGG 0.457220 3_2:+84339169 None:intergenic
GGCTTCTTTGCCCTTGCAAG+CGG 0.465152 3_2:-84339491 Msa0432180:CDS
CAAAACTTGGCCGTTGATCC+GGG 0.465888 3_2:+84339791 None:intergenic
GAAGATGAGGATAAAGAGAA+TGG 0.467439 3_2:-84340778 Msa0432180:CDS
AATTCACCTGAGTATATAAA+CGG 0.467724 3_2:-84339415 Msa0432180:CDS
GAGCTAGTTGTTGTCTGGCC+TGG 0.468240 3_2:+84339280 None:intergenic
GATTATTAGAAAACTTCTGC+TGG 0.476268 3_2:+84339152 None:intergenic
TCCAAAACCATGAGACAAGT+TGG 0.479542 3_2:+84342446 None:intergenic
AATTATCCCACTAGGTGAAA+AGG 0.479567 3_2:+84340077 None:intergenic
ACACTCCAACTAGTCTTAAC+GGG 0.480069 3_2:-84340044 Msa0432180:CDS
CGACGATCCAACTTGTCTCA+TGG 0.481091 3_2:-84342453 Msa0432180:CDS
CCAGCATGCTTCATTTGTAT+GGG 0.481160 3_2:+84339232 None:intergenic
TTTAGCTCCTCTAATCTCAC+AGG 0.481770 3_2:+84340976 None:intergenic
AGGATGGGAAGACCGTAATC+AGG 0.483908 3_2:-84339377 Msa0432180:CDS
TTTAAGCTGCTTGAACTTGT+GGG 0.484142 3_2:-84341234 Msa0432180:CDS
ACCAGGATACCCCGCTTGCA+AGG 0.485505 3_2:+84339480 None:intergenic
AACAGAGAAAAGAGTGGTAA+TGG 0.486289 3_2:+84342572 None:intergenic
TGTTTGAGATACCGAGACTT+GGG 0.488772 3_2:+84339749 None:intergenic
TCCGGGAATTTATTTGGGAT+GGG 0.491640 3_2:+84339808 None:intergenic
CCATGCCCGTTAAGACTAGT+TGG 0.492442 3_2:+84340039 None:intergenic
CAGGGAATGCCAATGTCCAT+AGG 0.498172 3_2:-84339904 Msa0432180:CDS
CCCATACAAATGAAGCATGC+TGG 0.498373 3_2:-84339232 Msa0432180:three_prime_UTR
GTTAATCAGAATATTCTTCA+GGG 0.498546 3_2:-84339922 Msa0432180:CDS
TCCGATGGGAAAACGGTCAC+CGG 0.502454 3_2:+84342496 None:intergenic
TCTTTCTCTATGCTGGATCA+AGG 0.503800 3_2:-84339625 Msa0432180:CDS
ATTGATAATTCCTCCTCTCA+TGG 0.508954 3_2:-84338378 Msa0432180:three_prime_UTR
TTTGTTTGGATTCCAGATAA+CGG 0.510003 3_2:+84339571 None:intergenic
GTAATTTGCCATTTCAAGGA+TGG 0.513037 3_2:-84339393 Msa0432180:CDS
GAAGAAGAAGTCTGATCCAA+AGG 0.514805 3_2:-84340929 Msa0432180:CDS
GACAAAACTACTTCTGATAG+TGG 0.516959 3_2:-84340883 Msa0432180:CDS
GAACGTGGCAAGCCATCTCC+AGG 0.523004 3_2:-84340320 Msa0432180:intron
ATTTAAGCTGCTTGAACTTG+TGG 0.531591 3_2:-84341235 Msa0432180:CDS
ATACTTGGCGAGTTCAATGA+TGG 0.533419 3_2:-84339116 Msa0432180:three_prime_UTR
CTAGTATGGTGGCAGCCTTA+GGG 0.534344 3_2:-84340164 Msa0432180:CDS
TGTTATTGCTTGACTAGTTG+TGG 0.534638 3_2:+84341335 None:intergenic
CTAGTTGTTGTCTGGCCTGG+TGG 0.535200 3_2:+84339283 None:intergenic
CTTCTTTGCCCTTGCAAGCG+GGG 0.537483 3_2:-84339489 Msa0432180:CDS
TGGTAACGAGGGAAATGAAG+TGG 0.537612 3_2:+84342627 None:intergenic
ACTTGACTCTAACTTGACTC+TGG 0.537992 3_2:+84338286 None:intergenic
TAATTTGCCATTTCAAGGAT+GGG 0.541605 3_2:-84339392 Msa0432180:CDS
AAATTACCGTTTATATACTC+AGG 0.541639 3_2:+84339409 None:intergenic
GCCTCGGGTTGTTTGGTCTG+TGG 0.542268 3_2:-84340722 Msa0432180:CDS
GGCAGTGGACTAAGATCCGC+AGG 0.543371 3_2:-84340862 Msa0432180:CDS
TTGTTTGAGATACCGAGACT+TGG 0.548378 3_2:+84339748 None:intergenic
TAACGGGAGTTATGGCTGAC+TGG 0.548521 3_2:+84339941 None:intergenic
ACTACTTCTGATAGTGGCAG+TGG 0.549024 3_2:-84340877 Msa0432180:CDS
CGACGGGGTATCTTTGTGAC+AGG 0.549898 3_2:-84338451 Msa0432180:three_prime_UTR
TGTGCACATCACTGATTACC+AGG 0.551505 3_2:+84341274 None:intergenic
GGTAACGAGGGAAATGAAGT+GGG 0.552250 3_2:+84342628 None:intergenic
CATCAGCTCAGAAGAAGCCT+CGG 0.554303 3_2:-84340738 Msa0432180:CDS
GGCGAGAACACGCATTCCGA+TGG 0.558372 3_2:+84342481 None:intergenic
CCAGGATACCCCGCTTGCAA+GGG 0.561131 3_2:+84339481 None:intergenic
CAAATAAATTCCCGGATCAA+CGG 0.562184 3_2:-84339801 Msa0432180:CDS
AGTCTCGGTATCTCAAACAA+TGG 0.562603 3_2:-84339745 Msa0432180:CDS
CAGATAATCACAGGCACCAT+GGG 0.562735 3_2:+84341005 None:intergenic
GGCGAGTTCAATGATGGGAC+AGG 0.562860 3_2:-84339110 Msa0432180:intron
AAAGATTAAACGTGCCTGAA+GGG 0.564313 3_2:-84338063 Msa0432180:three_prime_UTR
CAATCTTATTTGAGAATGGG+TGG 0.565295 3_2:-84340132 Msa0432180:CDS
GAGGCTTCTTCTGAGCTGAT+GGG 0.565647 3_2:+84340740 None:intergenic
AAAGCTGACTAAGAAAAGAA+AGG 0.566687 3_2:-84340815 Msa0432180:CDS
AGGGAATGCCAATGTCCATA+GGG 0.567298 3_2:-84339903 Msa0432180:CDS
TTGCAAGTGATCAAACCCTA+TGG 0.568247 3_2:+84339888 None:intergenic
TCTCTATGCTGGATCAAGGT+AGG 0.568314 3_2:-84339621 Msa0432180:CDS
TGATCACTTGCAAAACAGCA+AGG 0.568375 3_2:-84339878 Msa0432180:CDS
AGATTGATCTGCACTCCCTA+AGG 0.568615 3_2:+84340149 None:intergenic
GACAACAACTAGCTCCACCT+TGG 0.570450 3_2:-84339272 Msa0432180:three_prime_UTR
AATCTTTCGTTCTGACAGCA+GGG 0.578925 3_2:+84338079 None:intergenic
CTCAAACAATGGCTTGATGT+CGG 0.579465 3_2:-84339734 Msa0432180:CDS
TGTTCCTCCTTCAGATAACA+TGG 0.580834 3_2:-84339512 Msa0432180:CDS
ATCCCACAAAGAAAACTCCT+AGG 0.581413 3_2:+84338330 None:intergenic
ATCAGCTCAGAAGAAGCCTC+GGG 0.581453 3_2:-84340737 Msa0432180:CDS
GAAAGATTAAACGTGCCTGA+AGG 0.583000 3_2:-84338064 Msa0432180:three_prime_UTR
TATGCGATAATTACTCCGAC+GGG 0.584211 3_2:-84338467 Msa0432180:three_prime_UTR
AGATCCCCACTTACTTATGA+CGG 0.584541 3_2:+84341194 None:intergenic
CCAACTAGTCTTAACGGGCA+TGG 0.588692 3_2:-84340039 Msa0432180:CDS
GTTTGAGATACCGAGACTTG+GGG 0.591845 3_2:+84339750 None:intergenic
GCAGATAATCACAGGCACCA+TGG 0.592029 3_2:+84341004 None:intergenic
TGATCAAACCCTATGGACAT+TGG 0.593062 3_2:+84339895 None:intergenic
TGCATATGGTGATACAAAGC+TGG 0.593897 3_2:-84341043 Msa0432180:CDS
GATCCCCACTTACTTATGAC+GGG 0.593976 3_2:+84341195 None:intergenic
AGAAAATTCTGAATGTTGAG+AGG 0.594209 3_2:+84339645 None:intergenic
ATATGCGATAATTACTCCGA+CGG 0.598221 3_2:-84338468 Msa0432180:three_prime_UTR
GTGCACATGCCTGACATGGA+TGG 0.600433 3_2:-84341258 Msa0432180:CDS
TACCACTCAAATGTTACTTG+AGG 0.601641 3_2:-84339346 Msa0432180:exon
CCCAACTGAAGAAGCCCCGA+AGG 0.603189 3_2:+84340009 None:intergenic
AAATAGCATGTGTCCATGAG+AGG 0.605548 3_2:+84338365 None:intergenic
AGATTACCAATTATCCCACT+AGG 0.605896 3_2:+84340069 None:intergenic
AAAGAAGCCATGTTATCTGA+AGG 0.609057 3_2:+84339505 None:intergenic
AGGTTTCAGCAGATAATCAC+AGG 0.609824 3_2:+84340996 None:intergenic
GATCACTTGCAAAACAGCAA+GGG 0.610593 3_2:-84339877 Msa0432180:CDS
TGAGCTGCATTCAGTTAACT+CGG 0.614968 3_2:+84339204 None:intergenic
TGATGTGCACATGCCTGACA+TGG 0.615041 3_2:-84341262 Msa0432180:CDS
TCAGGATGAAGACGAAGATG+AGG 0.615403 3_2:-84340791 Msa0432180:CDS
ACAAGTTGGATCGTCGTCAA+CGG 0.615563 3_2:+84342460 None:intergenic
GCGAGAACACGCATTCCGAT+GGG 0.617268 3_2:+84342482 None:intergenic
GACCGTGGTATTGACATCTA+CGG 0.617438 3_2:+84342414 None:intergenic
ATCCTCAAGTAACATTTGAG+TGG 0.618668 3_2:+84339344 None:intergenic
ATATCTGGCAACGAACCACC+AGG 0.619562 3_2:+84339463 None:intergenic
TTGCCAGATATGCACTCCCA+AGG 0.620552 3_2:-84339451 Msa0432180:CDS
ATGCTGGATCAAGGTAGGCA+CGG 0.622381 3_2:-84339616 Msa0432180:CDS
GATAAGATGAAATTATTGGG+TGG 0.625103 3_2:-84338498 Msa0432180:three_prime_UTR
CCCACTTACTTATGACGGGA+AGG 0.626480 3_2:+84341199 None:intergenic
GAAGCCATGTTATCTGAAGG+AGG 0.632238 3_2:+84339508 None:intergenic
GATACAAAGCTGGTGATGAA+AGG 0.634012 3_2:-84341033 Msa0432180:CDS
ATCTTTCGTTCTGACAGCAG+GGG 0.641270 3_2:+84338080 None:intergenic
AAATATCACAAGGGAGAACG+TGG 0.641409 3_2:-84340335 Msa0432180:CDS
TACTTGGCGAGTTCAATGAT+GGG 0.644216 3_2:-84339115 Msa0432180:three_prime_UTR
TTGCAAGCGGGGTATCCTGG+TGG 0.644472 3_2:-84339478 Msa0432180:CDS
TAGCATGTGTCCATGAGAGG+AGG 0.648867 3_2:+84338368 None:intergenic
TAACAGCAGCAACAAACTTG+CGG 0.664827 3_2:+84340692 None:intergenic
TCCACAGACCAAACAACCCG+AGG 0.670707 3_2:+84340721 None:intergenic
AAACAAAGACAAGTTTGACC+TGG 0.671629 3_2:-84341292 Msa0432180:CDS
CTCCGTAGATGTCAATACCA+CGG 0.676022 3_2:-84342416 Msa0432180:intron
TTTGAGATACCGAGACTTGG+GGG 0.680383 3_2:+84339751 None:intergenic
CAATCTAGAATTCATCAATG+AGG 0.682137 3_2:+84338397 None:intergenic
TGAATGTCGAAAATATCACA+AGG 0.689686 3_2:-84340345 Msa0432180:CDS
GTGATGAAAGGAATTTCCCA+TGG 0.694201 3_2:-84341021 Msa0432180:CDS
ACGCACCCTGAAAGAAAACA+CGG 0.699020 3_2:-84339709 Msa0432180:CDS
CTATGAAACAGAGAAAAGAG+TGG 0.699177 3_2:+84342566 None:intergenic
AAACCAACAAGCTAGTATGG+TGG 0.708833 3_2:-84340175 Msa0432180:CDS
GAATGTCGAAAATATCACAA+GGG 0.725612 3_2:-84340344 Msa0432180:CDS
CTGTCACAAAGATACCCCGT+CGG 0.726754 3_2:+84338452 None:intergenic
ATGCGATAATTACTCCGACG+GGG 0.780483 3_2:-84338466 Msa0432180:three_prime_UTR
AGAGAATGGTAATGACAACG+AGG 0.788270 3_2:-84340764 Msa0432180:CDS
CACCCTGAAAGAAAACACGG+AGG 0.809478 3_2:-84339706 Msa0432180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATTTGAATTTC+TGG + chr3_2:84338424-84338443 None:intergenic 10.0%
!! ATAAAAAAAAACATGTCTTT+AGG - chr3_2:84338433-84338452 Msa0432180:three_prime_UTR 15.0%
!!! ATATATTTCATTTTGTTTAG+TGG - chr3_2:84338868-84338887 Msa0432180:intron 15.0%
!! TCAAAATGAATAAATAGAAA+AGG + chr3_2:84339514-84339533 None:intergenic 15.0%
!!! ATCATATCAAGAATTTTTTT+GGG + chr3_2:84340285-84340304 None:intergenic 15.0%
!! ATTAAAAAATTTAGTATCCA+AGG + chr3_2:84341397-84341416 None:intergenic 15.0%
!!! ACATTTTTTGAATATAATGT+TGG - chr3_2:84341567-84341586 Msa0432180:intron 15.0%
!! TGAAATTTGAAGATTTAAAT+TGG - chr3_2:84341808-84341827 Msa0432180:intron 15.0%
!!! CAATTTTTACAGATTTTATG+TGG - chr3_2:84338634-84338653 Msa0432180:intron 20.0%
!! ATATCTAGTAAAAATATGCT+TGG + chr3_2:84338770-84338789 None:intergenic 20.0%
!!! TATTTTTACTAGATATGTGA+AGG - chr3_2:84338774-84338793 Msa0432180:intron 20.0%
!! ATTAACACCAAAACAAAAAA+TGG + chr3_2:84338924-84338943 None:intergenic 20.0%
!!! TCAAAATGTTTTTGAATATC+TGG - chr3_2:84340090-84340109 Msa0432180:CDS 20.0%
!! ATAATACTCAAATTCAGTAA+TGG + chr3_2:84340229-84340248 None:intergenic 20.0%
!!! CATCATATCAAGAATTTTTT+TGG + chr3_2:84340286-84340305 None:intergenic 20.0%
!! AATTGTTTAAATTACGTGAT+TGG + chr3_2:84340666-84340685 None:intergenic 20.0%
!! ATTAGTAAAAATCATTCCTT+GGG + chr3_2:84341217-84341236 None:intergenic 20.0%
!! AATTAGTAAAAATCATTCCT+TGG + chr3_2:84341218-84341237 None:intergenic 20.0%
!!! TGTATAGTTTTTTTTGCATA+TGG - chr3_2:84341626-84341645 Msa0432180:intron 20.0%
!! AATTTGAAGATTTAAATTGG+TGG - chr3_2:84341811-84341830 Msa0432180:intron 20.0%
!! AAGAACATCAATGAAATATA+TGG + chr3_2:84341864-84341883 None:intergenic 20.0%
!!! AAACATTTGTTTTTCTATCT+TGG - chr3_2:84341953-84341972 Msa0432180:intron 20.0%
!!! CATGTTGTTTTATTTAACTT+AGG - chr3_2:84342009-84342028 Msa0432180:intron 20.0%
!! CAAGATAAGATGAAATTATT+GGG - chr3_2:84342148-84342167 Msa0432180:intron 20.0%
!!! TCTCATTAGTTTAATGTTTA+AGG - chr3_2:84342456-84342475 Msa0432180:CDS 20.0%
!!! GTTTCCATATAATTATTTCT+TGG + chr3_2:84342622-84342641 None:intergenic 20.0%
!!! ATGATTAATTTTGGTAACGA+GGG + chr3_2:84338036-84338055 None:intergenic 25.0%
!!! AATGATTAATTTTGGTAACG+AGG + chr3_2:84338037-84338056 None:intergenic 25.0%
! AACGATATTGTGTAGATATT+TGG - chr3_2:84338493-84338512 Msa0432180:three_prime_UTR 25.0%
!! GGAACTTTTACTAAGAATAA+AGG - chr3_2:84338514-84338533 Msa0432180:intron 25.0%
! ATGAAAAGAGTCATGATTTA+GGG - chr3_2:84338541-84338560 Msa0432180:intron 25.0%
! TGTTTCTTTATACTATCACA+GGG + chr3_2:84338616-84338635 None:intergenic 25.0%
!! TTGTTTCTTTATACTATCAC+AGG + chr3_2:84338617-84338636 None:intergenic 25.0%
! CAAAGACAAGAAAAGAAAAA+TGG + chr3_2:84339124-84339143 None:intergenic 25.0%
! TACTAATCATGAAGAAATAC+AGG + chr3_2:84339180-84339199 None:intergenic 25.0%
!!! AAGTGATACTTATTTCTGAT+TGG - chr3_2:84339279-84339298 Msa0432180:three_prime_UTR 25.0%
!!! AGTGATACTTATTTCTGATT+GGG - chr3_2:84339280-84339299 Msa0432180:three_prime_UTR 25.0%
! AAGAAAAAAATTAACAGCTG+AGG + chr3_2:84339491-84339510 None:intergenic 25.0%
!!! TCATTTTGACTCTTGTTTAT+TGG - chr3_2:84339525-84339544 Msa0432180:CDS 25.0%
! ATAAAAATTGTTTGTGTTGC+AGG + chr3_2:84340018-84340037 None:intergenic 25.0%
!!! CGATGTTTATTTTAAATCCT+AGG - chr3_2:84340115-84340134 Msa0432180:CDS 25.0%
!!! TCATAAGTCATTTTAAACCT+AGG + chr3_2:84340135-84340154 None:intergenic 25.0%
! TAATGGAATACTTTATGACA+TGG + chr3_2:84340212-84340231 None:intergenic 25.0%
! TAAAGAACTAGAAAAATACC+TGG + chr3_2:84340350-84340369 None:intergenic 25.0%
! ATTTCTTTCACTGAATGTTT+CGG - chr3_2:84340394-84340413 Msa0432180:intron 25.0%
!! AGATCAATCTTATTTGAGAA+TGG - chr3_2:84340513-84340532 Msa0432180:intron 25.0%
!! GATCAATCTTATTTGAGAAT+GGG - chr3_2:84340514-84340533 Msa0432180:intron 25.0%
! TGAAGAATATTCTGATTAAC+GGG + chr3_2:84340727-84340746 None:intergenic 25.0%
! CTGAAGAATATTCTGATTAA+CGG + chr3_2:84340728-84340747 None:intergenic 25.0%
! GTTAATCAGAATATTCTTCA+GGG - chr3_2:84340727-84340746 Msa0432180:CDS 25.0%
!! TTGAAGAGAAAGAATTTGTT+TGG + chr3_2:84341095-84341114 None:intergenic 25.0%
! AATTCACCTGAGTATATAAA+CGG - chr3_2:84341234-84341253 Msa0432180:CDS 25.0%
! AAATTACCGTTTATATACTC+AGG + chr3_2:84341243-84341262 None:intergenic 25.0%
! AAAAAATTTAGTATCCAAGG+TGG + chr3_2:84341394-84341413 None:intergenic 25.0%
!! CAGAAGTTTTCTAATAATCT+TGG - chr3_2:84341501-84341520 Msa0432180:intron 25.0%
! TATAATCTAATCAGTATGTG+TGG + chr3_2:84341689-84341708 None:intergenic 25.0%
!!! AATGATTTTAAGTCTTCTCT+CGG + chr3_2:84341775-84341794 None:intergenic 25.0%
!!! TTTGTTTTTCTATCTTGGAT+TGG - chr3_2:84341958-84341977 Msa0432180:intron 25.0%
!! AAGCAAAATATTTAGGACAA+GGG + chr3_2:84342090-84342109 None:intergenic 25.0%
! ACTATGGAAGCAAAATATTT+AGG + chr3_2:84342097-84342116 None:intergenic 25.0%
! AACATGGTATCAAATTACTA+TGG + chr3_2:84342113-84342132 None:intergenic 25.0%
! GCAAGATAAGATGAAATTAT+TGG - chr3_2:84342147-84342166 Msa0432180:intron 25.0%
! GCTACCAAGAAATAATTATA+TGG - chr3_2:84342615-84342634 Msa0432180:five_prime_UTR 25.0%
!! ACTGATTTGTGAGAGAAAAA+TGG - chr3_2:84338124-84338143 Msa0432180:three_prime_UTR 30.0%
!! TCTTTAGGATCAAATCTAAC+TGG - chr3_2:84338448-84338467 Msa0432180:three_prime_UTR 30.0%
!! CTTTAGGATCAAATCTAACT+GGG - chr3_2:84338449-84338468 Msa0432180:three_prime_UTR 30.0%
GATGAAAAGAGTCATGATTT+AGG - chr3_2:84338540-84338559 Msa0432180:intron 30.0%
AAGTCAACACACTATGAATT+TGG + chr3_2:84338576-84338595 None:intergenic 30.0%
ACTTAATTATGTGCTTGCTT+GGG - chr3_2:84338736-84338755 Msa0432180:intron 30.0%
! AAGCAATGAAGCTCTAATTA+CGG + chr3_2:84338805-84338824 None:intergenic 30.0%
!! TTCATTTTGTTTAGTGGCTT+TGG - chr3_2:84338874-84338893 Msa0432180:intron 30.0%
!!! TGGTCAACCATTTTTTGTTT+TGG - chr3_2:84338914-84338933 Msa0432180:intron 30.0%
TTGACTATAACCAAGTGATT+GGG + chr3_2:84339101-84339120 None:intergenic 30.0%
!! TTCACTGTTGCTTTCTTTAT+TGG - chr3_2:84339218-84339237 Msa0432180:three_prime_UTR 30.0%
!! GTGATACTTATTTCTGATTG+GGG - chr3_2:84339281-84339300 Msa0432180:three_prime_UTR 30.0%
GCAGAAAATTCAGATGAAAA+TGG - chr3_2:84339811-84339830 Msa0432180:CDS 30.0%
AAAGCTGACTAAGAAAAGAA+AGG - chr3_2:84339834-84339853 Msa0432180:CDS 30.0%
ATAAAATTCAGTAAAGCTCG+AGG + chr3_2:84340054-84340073 None:intergenic 30.0%
!!! TAATGTTGTTTTACTTGCAG+AGG - chr3_2:84340254-84340273 Msa0432180:intron 30.0%
TGAATGTCGAAAATATCACA+AGG - chr3_2:84340304-84340323 Msa0432180:intron 30.0%
GAATGTCGAAAATATCACAA+GGG - chr3_2:84340305-84340324 Msa0432180:intron 30.0%
GAAACATTCAGTGAAAGAAA+TGG + chr3_2:84340395-84340414 None:intergenic 30.0%
TTTCTTTCACTGAATGTTTC+GGG - chr3_2:84340395-84340414 Msa0432180:intron 30.0%
!! AATGTTTCGGGTTTATGAAA+TGG - chr3_2:84340407-84340426 Msa0432180:intron 30.0%
!! CTGGAATTTAAGTTGATCAT+TGG + chr3_2:84340692-84340711 None:intergenic 30.0%
CGTTAATCAGAATATTCTTC+AGG - chr3_2:84340726-84340745 Msa0432180:CDS 30.0%
! TTGTTTTCACATCAGTATTC+AGG + chr3_2:84340816-84340835 None:intergenic 30.0%
AGAAAATTCTGAATGTTGAG+AGG + chr3_2:84341007-84341026 None:intergenic 30.0%
! AGAATTTTCTTTCTCTATGC+TGG - chr3_2:84341017-84341036 Msa0432180:CDS 30.0%
TTTGTTTGGATTCCAGATAA+CGG + chr3_2:84341081-84341100 None:intergenic 30.0%
! TAATTTGCCATTTCAAGGAT+GGG - chr3_2:84341257-84341276 Msa0432180:CDS 30.0%
GATTATTAGAAAACTTCTGC+TGG + chr3_2:84341500-84341519 None:intergenic 30.0%
TTCTAATAATCTTGGTTCAC+TGG - chr3_2:84341509-84341528 Msa0432180:intron 30.0%
CAAGGAAATAATGTTTGAGA+TGG + chr3_2:84341665-84341684 None:intergenic 30.0%
!! ATGATTTTAAGTCTTCTCTC+GGG + chr3_2:84341774-84341793 None:intergenic 30.0%
TTCATTGATGTTCTTTGTGA+TGG - chr3_2:84341869-84341888 Msa0432180:intron 30.0%
ATCCTATGTGAATGTTCTAA+AGG + chr3_2:84341931-84341950 None:intergenic 30.0%
ACAACATGCTATATACTCAA+CGG + chr3_2:84341997-84342016 None:intergenic 30.0%
! AGCAAAATATTTAGGACAAG+GGG + chr3_2:84342089-84342108 None:intergenic 30.0%
! GAAGCAAAATATTTAGGACA+AGG + chr3_2:84342091-84342110 None:intergenic 30.0%
GATAAGATGAAATTATTGGG+TGG - chr3_2:84342151-84342170 Msa0432180:intron 30.0%
! CAATCTAGAATTCATCAATG+AGG + chr3_2:84342255-84342274 None:intergenic 30.0%
!! TATTTAACCAGTTTTGTCCT+AGG - chr3_2:84342302-84342321 Msa0432180:intron 30.0%
AACAGAGAAAAGAGTGGTAA+TGG + chr3_2:84338080-84338099 None:intergenic 35.0%
CTATGAAACAGAGAAAAGAG+TGG + chr3_2:84338086-84338105 None:intergenic 35.0%
GAGAGAAAAATGGATGATTC+CGG - chr3_2:84338134-84338153 Msa0432180:three_prime_UTR 35.0%
GATCAAATCTAACTGGGAAA+TGG - chr3_2:84338455-84338474 Msa0432180:three_prime_UTR 35.0%
CACTTAATTATGTGCTTGCT+TGG - chr3_2:84338735-84338754 Msa0432180:intron 35.0%
! ATGAGCAACTTTTCCTACTA+CGG + chr3_2:84338840-84338859 None:intergenic 35.0%
TGGACTGAATATGCACTTTA+TGG - chr3_2:84338894-84338913 Msa0432180:intron 35.0%
TGACTAAACTCCGGAATATT+AGG + chr3_2:84338989-84339008 None:intergenic 35.0%
TAATATTCCGGAGTTTAGTC+AGG - chr3_2:84338988-84339007 Msa0432180:intron 35.0%
AATATTCCGGAGTTTAGTCA+GGG - chr3_2:84338989-84339008 Msa0432180:intron 35.0%
GTTGACTATAACCAAGTGAT+TGG + chr3_2:84339102-84339121 None:intergenic 35.0%
! ACTGTTGTTGCTTAGATTTC+AGG - chr3_2:84339152-84339171 Msa0432180:three_prime_UTR 35.0%
! TGTTATTGCTTGACTAGTTG+TGG + chr3_2:84339317-84339336 None:intergenic 35.0%
!!! GTCTTTGTTTTCTCTCAACA+TGG + chr3_2:84339347-84339366 None:intergenic 35.0%
AAACAAAGACAAGTTTGACC+TGG - chr3_2:84339357-84339376 Msa0432180:CDS 35.0%
ATTTAAGCTGCTTGAACTTG+TGG - chr3_2:84339414-84339433 Msa0432180:CDS 35.0%
TTTAAGCTGCTTGAACTTGT+GGG - chr3_2:84339415-84339434 Msa0432180:CDS 35.0%
ATTTCAGTGTTGTCTGCATA+TGG - chr3_2:84339592-84339611 Msa0432180:CDS 35.0%
TAGAGGAGCTAAAGAACATT+TGG - chr3_2:84339683-84339702 Msa0432180:CDS 35.0%
ACATTTGGCAGCATGTAATT+AGG - chr3_2:84339698-84339717 Msa0432180:CDS 35.0%
!!! CTGGTTTTGTTTTTCTCCTT+TGG + chr3_2:84339739-84339758 None:intergenic 35.0%
!!! AGTAGTTTTGTCTGGTTTAC+TGG + chr3_2:84339758-84339777 None:intergenic 35.0%
!!! CTATCAGAAGTAGTTTTGTC+TGG + chr3_2:84339766-84339785 None:intergenic 35.0%
GACAAAACTACTTCTGATAG+TGG - chr3_2:84339766-84339785 Msa0432180:CDS 35.0%
GACTAAGAAAAGAAAGGATC+AGG - chr3_2:84339840-84339859 Msa0432180:CDS 35.0%
GAAGATGAGGATAAAGAGAA+TGG - chr3_2:84339871-84339890 Msa0432180:CDS 35.0%
TTATGATGATAGATGCCACT+TGG - chr3_2:84340149-84340168 Msa0432180:CDS 35.0%
! TATGATGATAGATGCCACTT+GGG - chr3_2:84340150-84340169 Msa0432180:CDS 35.0%
GAAATGAAATTCATCCCAAG+TGG + chr3_2:84340167-84340186 None:intergenic 35.0%
ACTAGAAAAATACCTGGAGA+TGG + chr3_2:84340344-84340363 None:intergenic 35.0%
! CAATCTTATTTGAGAATGGG+TGG - chr3_2:84340517-84340536 Msa0432180:intron 35.0%
AATTATCCCACTAGGTGAAA+AGG + chr3_2:84340575-84340594 None:intergenic 35.0%
! TTTTCACCTAGTGGGATAAT+TGG - chr3_2:84340574-84340593 Msa0432180:intron 35.0%
AGATTACCAATTATCCCACT+AGG + chr3_2:84340583-84340602 None:intergenic 35.0%
!! AACACTCCAACTAGTCTTAA+CGG - chr3_2:84340604-84340623 Msa0432180:intron 35.0%
ATTCTGATTAACGGGAGTTA+TGG + chr3_2:84340719-84340738 None:intergenic 35.0%
GTTGATCCGGGAATTTATTT+GGG + chr3_2:84340849-84340868 None:intergenic 35.0%
CAAATAAATTCCCGGATCAA+CGG - chr3_2:84340848-84340867 Msa0432180:CDS 35.0%
AAAGAAGCCATGTTATCTGA+AGG + chr3_2:84341147-84341166 None:intergenic 35.0%
! AACGGTAATTTGCCATTTCA+AGG - chr3_2:84341252-84341271 Msa0432180:CDS 35.0%
! GTAATTTGCCATTTCAAGGA+TGG - chr3_2:84341256-84341275 Msa0432180:CDS 35.0%
! TACCACTCAAATGTTACTTG+AGG - chr3_2:84341303-84341322 Msa0432180:CDS 35.0%
ATCCTCAAGTAACATTTGAG+TGG + chr3_2:84341308-84341327 None:intergenic 35.0%
TTCCCATAAATGCTTCTGTA+TGG - chr3_2:84341592-84341611 Msa0432180:intron 35.0%
!! AGCCATACAGAAGCATTTAT+GGG + chr3_2:84341597-84341616 None:intergenic 35.0%
!! AAGCCATACAGAAGCATTTA+TGG + chr3_2:84341598-84341617 None:intergenic 35.0%
ACAAATATAACCATGCTGAC+TGG + chr3_2:84341745-84341764 None:intergenic 35.0%
CTAAAGGACATCGAAAGTTA+CGG + chr3_2:84341915-84341934 None:intergenic 35.0%
!! GTCCTTTAGAACATTCACAT+AGG - chr3_2:84341926-84341945 Msa0432180:intron 35.0%
TAAAGTATGCAATGCTCGTT+TGG - chr3_2:84342043-84342062 Msa0432180:intron 35.0%
ATATGCGATAATTACTCCGA+CGG - chr3_2:84342181-84342200 Msa0432180:intron 35.0%
! TATCTTTGTGACAGGAGTTT+TGG - chr3_2:84342206-84342225 Msa0432180:intron 35.0%
! ATTGATAATTCCTCCTCTCA+TGG - chr3_2:84342271-84342290 Msa0432180:intron 35.0%
! CTTGACTCTGGAAAAAGAAA+AGG + chr3_2:84342354-84342373 None:intergenic 35.0%
AAAGATTAAACGTGCCTGAA+GGG - chr3_2:84342586-84342605 Msa0432180:five_prime_UTR 35.0%
! TCCAACTTGTCTCATGGTTT+TGG - chr3_2:84338202-84338221 Msa0432180:three_prime_UTR 40.0%
TCCAAAACCATGAGACAAGT+TGG + chr3_2:84338206-84338225 None:intergenic 40.0%
TCTAACTGGGAAATGGAGTT+AGG - chr3_2:84338462-84338481 Msa0432180:three_prime_UTR 40.0%
! GAGTCATGATTTAGGGTCAA+AGG - chr3_2:84338548-84338567 Msa0432180:intron 40.0%
TAGAGCTTCATTGCTTGTAG+AGG - chr3_2:84338809-84338828 Msa0432180:intron 40.0%
CTAAACTCCGGAATATTAGG+AGG + chr3_2:84338986-84339005 None:intergenic 40.0%
TGATTGGGATCAAGAGGTTA+AGG + chr3_2:84339086-84339105 None:intergenic 40.0%
AGCTTAAATCCATCCATGTC+AGG + chr3_2:84339403-84339422 None:intergenic 40.0%
TGAACTTGTGGGACTTGAAA+TGG - chr3_2:84339426-84339445 Msa0432180:CDS 40.0%
AGATCCCCACTTACTTATGA+CGG + chr3_2:84339458-84339477 None:intergenic 40.0%
TGCATATGGTGATACAAAGC+TGG - chr3_2:84339606-84339625 Msa0432180:CDS 40.0%
! GATACAAAGCTGGTGATGAA+AGG - chr3_2:84339616-84339635 Msa0432180:CDS 40.0%
GTGATGAAAGGAATTTCCCA+TGG - chr3_2:84339628-84339647 Msa0432180:CDS 40.0%
AGGTTTCAGCAGATAATCAC+AGG + chr3_2:84339656-84339675 None:intergenic 40.0%
! TTTAGCTCCTCTAATCTCAC+AGG + chr3_2:84339676-84339695 None:intergenic 40.0%
GAAGAAGAAGTCTGATCCAA+AGG - chr3_2:84339720-84339739 Msa0432180:CDS 40.0%
! ATCTGAATTTTCTGCTCCTG+CGG + chr3_2:84339806-84339825 None:intergenic 40.0%
! AGAGAATGGTAATGACAACG+AGG - chr3_2:84339885-84339904 Msa0432180:CDS 40.0%
TAACAGCAGCAACAAACTTG+CGG + chr3_2:84339960-84339979 None:intergenic 40.0%
GTTGCTGCTGTTAATCAGTT+AGG - chr3_2:84339967-84339986 Msa0432180:CDS 40.0%
AAATATCACAAGGGAGAACG+TGG - chr3_2:84340314-84340333 Msa0432180:intron 40.0%
TGCAAACCAACAAGCTAGTA+TGG - chr3_2:84340471-84340490 Msa0432180:intron 40.0%
AAACCAACAAGCTAGTATGG+TGG - chr3_2:84340474-84340493 Msa0432180:intron 40.0%
TATTTGAGAATGGGTGGTTC+TGG - chr3_2:84340523-84340542 Msa0432180:intron 40.0%
! TTCAGATCCTTTTCACCTAG+TGG - chr3_2:84340565-84340584 Msa0432180:intron 40.0%
! TCAGATCCTTTTCACCTAGT+GGG - chr3_2:84340566-84340585 Msa0432180:intron 40.0%
!! ACACTCCAACTAGTCTTAAC+GGG - chr3_2:84340605-84340624 Msa0432180:intron 40.0%
TGATCAAACCCTATGGACAT+TGG + chr3_2:84340757-84340776 None:intergenic 40.0%
TTGCAAGTGATCAAACCCTA+TGG + chr3_2:84340764-84340783 None:intergenic 40.0%
TGATCACTTGCAAAACAGCA+AGG - chr3_2:84340771-84340790 Msa0432180:CDS 40.0%
GATCACTTGCAAAACAGCAA+GGG - chr3_2:84340772-84340791 Msa0432180:CDS 40.0%
TCCCATCCCAAATAAATTCC+CGG - chr3_2:84340840-84340859 Msa0432180:CDS 40.0%
! TCCGGGAATTTATTTGGGAT+GGG + chr3_2:84340844-84340863 None:intergenic 40.0%
ATCCGGGAATTTATTTGGGA+TGG + chr3_2:84340845-84340864 None:intergenic 40.0%
CGTTGATCCGGGAATTTATT+TGG + chr3_2:84340850-84340869 None:intergenic 40.0%
! TGTTTGAGATACCGAGACTT+GGG + chr3_2:84340903-84340922 None:intergenic 40.0%
! TTGTTTGAGATACCGAGACT+TGG + chr3_2:84340904-84340923 None:intergenic 40.0%
AGTCTCGGTATCTCAAACAA+TGG - chr3_2:84340904-84340923 Msa0432180:intron 40.0%
CTCAAACAATGGCTTGATGT+CGG - chr3_2:84340915-84340934 Msa0432180:CDS 40.0%
! TACCTCCGTGTTTTCTTTCA+GGG + chr3_2:84340948-84340967 None:intergenic 40.0%
! ATACCTCCGTGTTTTCTTTC+AGG + chr3_2:84340949-84340968 None:intergenic 40.0%
! GAAAGAAAACACGGAGGTAT+AGG - chr3_2:84340949-84340968 Msa0432180:CDS 40.0%
! AAACACGGAGGTATAGGAAT+AGG - chr3_2:84340955-84340974 Msa0432180:CDS 40.0%
! GGAGGTATAGGAATAGGATA+TGG - chr3_2:84340961-84340980 Msa0432180:CDS 40.0%
TCTTTCTCTATGCTGGATCA+AGG - chr3_2:84341024-84341043 Msa0432180:CDS 40.0%
TGTTCCTCCTTCAGATAACA+TGG - chr3_2:84341137-84341156 Msa0432180:intron 40.0%
GGTAAGTAGCATCCTGATTA+CGG + chr3_2:84341287-84341306 None:intergenic 40.0%
AACTCTCTTGCTCCAGTTAA+CGG - chr3_2:84341333-84341352 Msa0432180:CDS 40.0%
CCAGCATGCTTCATTTGTAT+GGG + chr3_2:84341420-84341439 None:intergenic 40.0%
TCCAGCATGCTTCATTTGTA+TGG + chr3_2:84341421-84341440 None:intergenic 40.0%
TGAGCTGCATTCAGTTAACT+CGG + chr3_2:84341448-84341467 None:intergenic 40.0%
!! TGCTGGCTTATGATATTAGC+TGG + chr3_2:84341483-84341502 None:intergenic 40.0%
TCTTGGTTCACTGGAATACT+TGG - chr3_2:84341518-84341537 Msa0432180:intron 40.0%
ATACTTGGCGAGTTCAATGA+TGG - chr3_2:84341533-84341552 Msa0432180:intron 40.0%
TACTTGGCGAGTTCAATGAT+GGG - chr3_2:84341534-84341553 Msa0432180:intron 40.0%
CTAATCAGTATGTGTGGTCA+AGG + chr3_2:84341683-84341702 None:intergenic 40.0%
CGAAAGTTACGGTGGTTAAT+TGG + chr3_2:84341904-84341923 None:intergenic 40.0%
ATACCATGTTCATGACATGC+AGG - chr3_2:84342123-84342142 Msa0432180:intron 40.0%
TATGCGATAATTACTCCGAC+GGG - chr3_2:84342182-84342201 Msa0432180:intron 40.0%
AAATAGCATGTGTCCATGAG+AGG + chr3_2:84342287-84342306 None:intergenic 40.0%
GAAAACTCCTAGGACAAAAC+TGG + chr3_2:84342312-84342331 None:intergenic 40.0%
! TGTCCTAGGAGTTTTCTTTG+TGG - chr3_2:84342316-84342335 Msa0432180:intron 40.0%
! GTCCTAGGAGTTTTCTTTGT+GGG - chr3_2:84342317-84342336 Msa0432180:intron 40.0%
ATCCCACAAAGAAAACTCCT+AGG + chr3_2:84342322-84342341 None:intergenic 40.0%
ACTTGACTCTAACTTGACTC+TGG + chr3_2:84342366-84342385 None:intergenic 40.0%
AATCTTTCGTTCTGACAGCA+GGG + chr3_2:84342573-84342592 None:intergenic 40.0%
TAATCTTTCGTTCTGACAGC+AGG + chr3_2:84342574-84342593 None:intergenic 40.0%
GAAAGATTAAACGTGCCTGA+AGG - chr3_2:84342585-84342604 Msa0432180:five_prime_UTR 40.0%
GGTAACGAGGGAAATGAAGT+GGG + chr3_2:84338024-84338043 None:intergenic 45.0%
! TGGTAACGAGGGAAATGAAG+TGG + chr3_2:84338025-84338044 None:intergenic 45.0%
! ACAAGTTGGATCGTCGTCAA+CGG + chr3_2:84338192-84338211 None:intergenic 45.0%
CTCCGTAGATGTCAATACCA+CGG - chr3_2:84338233-84338252 Msa0432180:three_prime_UTR 45.0%
!! GACCGTGGTATTGACATCTA+CGG + chr3_2:84338238-84338257 None:intergenic 45.0%
GTCAATACCACGGTCAGATT+CGG - chr3_2:84338243-84338262 Msa0432180:three_prime_UTR 45.0%
TGTAGAGGTAGTACCGTAGT+AGG - chr3_2:84338824-84338843 Msa0432180:intron 45.0%
TTACCTCCCTGACTAAACTC+CGG + chr3_2:84338998-84339017 None:intergenic 45.0%
GTCAGGGAGGTAATTGAACT+CGG - chr3_2:84339005-84339024 Msa0432180:intron 45.0%
TCAGGGAGGTAATTGAACTC+GGG - chr3_2:84339006-84339025 Msa0432180:intron 45.0%
TCTCTCGAATGATTCCTCCT+AGG - chr3_2:84339054-84339073 Msa0432180:intron 45.0%
CTCTCGAATGATTCCTCCTA+GGG - chr3_2:84339055-84339074 Msa0432180:intron 45.0%
TCTCGAATGATTCCTCCTAG+GGG - chr3_2:84339056-84339075 Msa0432180:intron 45.0%
ACCTCTTGATCCCAATCACT+TGG - chr3_2:84339088-84339107 Msa0432180:intron 45.0%
ACCAAGTGATTGGGATCAAG+AGG + chr3_2:84339092-84339111 None:intergenic 45.0%
! TGTGCACATCACTGATTACC+AGG + chr3_2:84339378-84339397 None:intergenic 45.0%
ACCTTCCCGTCATAAGTAAG+TGG - chr3_2:84339449-84339468 Msa0432180:CDS 45.0%
CCTTCCCGTCATAAGTAAGT+GGG - chr3_2:84339450-84339469 Msa0432180:CDS 45.0%
CTTCCCGTCATAAGTAAGTG+GGG - chr3_2:84339451-84339470 Msa0432180:CDS 45.0%
GATCCCCACTTACTTATGAC+GGG + chr3_2:84339457-84339476 None:intergenic 45.0%
CAGATAATCACAGGCACCAT+GGG + chr3_2:84339647-84339666 None:intergenic 45.0%
GCTGAAACCTGTGAGATTAG+AGG - chr3_2:84339666-84339685 Msa0432180:CDS 45.0%
!! ACTACTTCTGATAGTGGCAG+TGG - chr3_2:84339772-84339791 Msa0432180:CDS 45.0%
TCAGGATGAAGACGAAGATG+AGG - chr3_2:84339858-84339877 Msa0432180:CDS 45.0%
AGATTGATCTGCACTCCCTA+AGG + chr3_2:84340503-84340522 None:intergenic 45.0%
AGGGAATGCCAATGTCCATA+GGG - chr3_2:84340746-84340765 Msa0432180:CDS 45.0%
GAACTAGAGGTGGCAAAACT+TGG + chr3_2:84340874-84340893 None:intergenic 45.0%
! TTTGAGATACCGAGACTTGG+GGG + chr3_2:84340901-84340920 None:intergenic 45.0%
! GTTTGAGATACCGAGACTTG+GGG + chr3_2:84340902-84340921 None:intergenic 45.0%
ACGCACCCTGAAAGAAAACA+CGG - chr3_2:84340940-84340959 Msa0432180:CDS 45.0%
TCTCTATGCTGGATCAAGGT+AGG - chr3_2:84341028-84341047 Msa0432180:CDS 45.0%
AAGGTAGGCACGGTGATAAT+TGG - chr3_2:84341043-84341062 Msa0432180:CDS 45.0%
GAAGCCATGTTATCTGAAGG+AGG + chr3_2:84341144-84341163 None:intergenic 45.0%
! ATTCCTTGGGAGTGCATATC+TGG + chr3_2:84341204-84341223 None:intergenic 45.0%
CCCATACAAATGAAGCATGC+TGG - chr3_2:84341417-84341436 Msa0432180:intron 45.0%
AAGACATACTCCAGTCAGCA+TGG - chr3_2:84341732-84341751 Msa0432180:intron 45.0%
AAGGACATCGAAAGTTACGG+TGG + chr3_2:84341912-84341931 None:intergenic 45.0%
ATGCGATAATTACTCCGACG+GGG - chr3_2:84342183-84342202 Msa0432180:intron 45.0%
ATCTTTCGTTCTGACAGCAG+GGG + chr3_2:84342572-84342591 None:intergenic 45.0%
! TTGGTAGCAACAATCCCTTC+AGG + chr3_2:84342603-84342622 None:intergenic 45.0%
!!! TAAATAAAAATGATTAATTT+TGG + chr3_2:84338045-84338064 None:intergenic 5.0%
CACGCATTCCGATGGGAAAA+CGG + chr3_2:84338163-84338182 None:intergenic 50.0%
CGACGATCCAACTTGTCTCA+TGG - chr3_2:84338196-84338215 Msa0432180:three_prime_UTR 50.0%
ACTAGATCCGAATCTGACCG+TGG + chr3_2:84338253-84338272 None:intergenic 50.0%
TGTTAATCCTCCTGCTCTCG+AGG - chr3_2:84338937-84338956 Msa0432180:intron 50.0%
GTTAATCCTCCTGCTCTCGA+GGG - chr3_2:84338938-84338957 Msa0432180:intron 50.0%
ATTCCGGAGTTTAGTCAGGG+AGG - chr3_2:84338992-84339011 Msa0432180:intron 50.0%
TTCCGCCTGTGAATCAAGCT+CGG - chr3_2:84339029-84339048 Msa0432180:intron 50.0%
AGAACCCGAGCTTGATTCAC+AGG + chr3_2:84339037-84339056 None:intergenic 50.0%
CTCGAATGATTCCTCCTAGG+GGG - chr3_2:84339057-84339076 Msa0432180:intron 50.0%
TCGAATGATTCCTCCTAGGG+GGG - chr3_2:84339058-84339077 Msa0432180:intron 50.0%
TGATGTGCACATGCCTGACA+TGG - chr3_2:84339387-84339406 Msa0432180:CDS 50.0%
! CCCACTTACTTATGACGGGA+AGG + chr3_2:84339453-84339472 None:intergenic 50.0%
GCAGATAATCACAGGCACCA+TGG + chr3_2:84339648-84339667 None:intergenic 50.0%
GAGGCTTCTTCTGAGCTGAT+GGG + chr3_2:84339912-84339931 None:intergenic 50.0%
CATCAGCTCAGAAGAAGCCT+CGG - chr3_2:84339911-84339930 Msa0432180:CDS 50.0%
ATCAGCTCAGAAGAAGCCTC+GGG - chr3_2:84339912-84339931 Msa0432180:CDS 50.0%
! AGAAGAAGCCTCGGGTTGTT+TGG - chr3_2:84339920-84339939 Msa0432180:CDS 50.0%
! CTGCCACCATACTAGCTTGT+TGG + chr3_2:84340480-84340499 None:intergenic 50.0%
CTAGTATGGTGGCAGCCTTA+GGG - chr3_2:84340485-84340504 Msa0432180:intron 50.0%
CCATGCCCGTTAAGACTAGT+TGG + chr3_2:84340613-84340632 None:intergenic 50.0%
!! CCAACTAGTCTTAACGGGCA+TGG - chr3_2:84340610-84340629 Msa0432180:intron 50.0%
! CGGGCATGGATTTTCTCCTT+CGG - chr3_2:84340624-84340643 Msa0432180:intron 50.0%
! GGGCATGGATTTTCTCCTTC+GGG - chr3_2:84340625-84340644 Msa0432180:intron 50.0%
! GGCATGGATTTTCTCCTTCG+GGG - chr3_2:84340626-84340645 Msa0432180:intron 50.0%
TAACGGGAGTTATGGCTGAC+TGG + chr3_2:84340711-84340730 None:intergenic 50.0%
CAGGGAATGCCAATGTCCAT+AGG - chr3_2:84340745-84340764 Msa0432180:CDS 50.0%
CAAAACTTGGCCGTTGATCC+GGG + chr3_2:84340861-84340880 None:intergenic 50.0%
GCAAAACTTGGCCGTTGATC+CGG + chr3_2:84340862-84340881 None:intergenic 50.0%
ACTTGGGGGATGAGAACTAG+AGG + chr3_2:84340887-84340906 None:intergenic 50.0%
AGTTCTCATCCCCCAAGTCT+CGG - chr3_2:84340889-84340908 Msa0432180:intron 50.0%
CACCCTGAAAGAAAACACGG+AGG - chr3_2:84340943-84340962 Msa0432180:CDS 50.0%
ATGCTGGATCAAGGTAGGCA+CGG - chr3_2:84341033-84341052 Msa0432180:CDS 50.0%
ATATCTGGCAACGAACCACC+AGG + chr3_2:84341189-84341208 None:intergenic 50.0%
TTGCCAGATATGCACTCCCA+AGG - chr3_2:84341198-84341217 Msa0432180:intron 50.0%
CGGTCTTCCCATCCTTGAAA+TGG + chr3_2:84341267-84341286 None:intergenic 50.0%
AGGATGGGAAGACCGTAATC+AGG - chr3_2:84341272-84341291 Msa0432180:CDS 50.0%
GGAAAAACGGCACCGTTAAC+TGG + chr3_2:84341348-84341367 None:intergenic 50.0%
TGTCTGGCCTGGTGGAAAAA+CGG + chr3_2:84341361-84341380 None:intergenic 50.0%
AGGTGGAGCTAGTTGTTGTC+TGG + chr3_2:84341377-84341396 None:intergenic 50.0%
GACAACAACTAGCTCCACCT+TGG - chr3_2:84341377-84341396 Msa0432180:intron 50.0%
GCTCCTGCATGTCATGAACA+TGG + chr3_2:84342129-84342148 None:intergenic 50.0%
CTGTCACAAAGATACCCCGT+CGG + chr3_2:84342200-84342219 None:intergenic 50.0%
TAGCATGTGTCCATGAGAGG+AGG + chr3_2:84342284-84342303 None:intergenic 50.0%
! TCCGGTGACCGTTTTCCCAT+CGG - chr3_2:84338152-84338171 Msa0432180:three_prime_UTR 55.0%
TCCGATGGGAAAACGGTCAC+CGG + chr3_2:84338156-84338175 None:intergenic 55.0%
GCGAGAACACGCATTCCGAT+GGG + chr3_2:84338170-84338189 None:intergenic 55.0%
GGGGAGGCCTCCTAATATTC+CGG - chr3_2:84338976-84338995 Msa0432180:intron 55.0%
TCCGCCTGTGAATCAAGCTC+GGG - chr3_2:84339030-84339049 Msa0432180:intron 55.0%
ACCCGAGCTTGATTCACAGG+CGG + chr3_2:84339034-84339053 None:intergenic 55.0%
GTGCACATGCCTGACATGGA+TGG - chr3_2:84339391-84339410 Msa0432180:CDS 55.0%
CGAGGCTTCTTCTGAGCTGA+TGG + chr3_2:84339913-84339932 None:intergenic 55.0%
TCCACAGACCAAACAACCCG+AGG + chr3_2:84339931-84339950 None:intergenic 55.0%
GCTAGTATGGTGGCAGCCTT+AGG - chr3_2:84340484-84340503 Msa0432180:intron 55.0%
TCCTTCGGGGCTTCTTCAGT+TGG - chr3_2:84340639-84340658 Msa0432180:intron 55.0%
CCTTCGGGGCTTCTTCAGTT+GGG - chr3_2:84340640-84340659 Msa0432180:intron 55.0%
TGGGGGATGAGAACTAGAGG+TGG + chr3_2:84340884-84340903 None:intergenic 55.0%
! TCAAGCGACGTGCCGTTATC+TGG - chr3_2:84341066-84341085 Msa0432180:intron 55.0%
GGCTTCTTTGCCCTTGCAAG+CGG - chr3_2:84341158-84341177 Msa0432180:intron 55.0%
GCTTCTTTGCCCTTGCAAGC+GGG - chr3_2:84341159-84341178 Msa0432180:intron 55.0%
CTTCTTTGCCCTTGCAAGCG+GGG - chr3_2:84341160-84341179 Msa0432180:intron 55.0%
!!! AACGGTGCCGTTTTTCCACC+AGG - chr3_2:84341351-84341370 Msa0432180:intron 55.0%
CTAGTTGTTGTCTGGCCTGG+TGG + chr3_2:84341369-84341388 None:intergenic 55.0%
GAGCTAGTTGTTGTCTGGCC+TGG + chr3_2:84341372-84341391 None:intergenic 55.0%
! GGCGAGTTCAATGATGGGAC+AGG - chr3_2:84341539-84341558 Msa0432180:intron 55.0%
! CGACGGGGTATCTTTGTGAC+AGG - chr3_2:84342198-84342217 Msa0432180:intron 55.0%
GGCGAGAACACGCATTCCGA+TGG + chr3_2:84338171-84338190 None:intergenic 60.0%
ATCCTCCTGCTCTCGAGGGA+AGG - chr3_2:84338942-84338961 Msa0432180:intron 60.0%
GAGGGAAGGACCCCTCTCAA+GGG - chr3_2:84338956-84338975 Msa0432180:intron 60.0%
AGGGAAGGACCCCTCTCAAG+GGG - chr3_2:84338957-84338976 Msa0432180:intron 60.0%
TAGGAGGCCTCCCCTTGAGA+GGG + chr3_2:84338970-84338989 None:intergenic 60.0%
TTAGGAGGCCTCCCCTTGAG+AGG + chr3_2:84338971-84338990 None:intergenic 60.0%
AGAGGTTAAGGAGCCCCCCT+AGG + chr3_2:84339074-84339093 None:intergenic 60.0%
!! GGCAGTGGACTAAGATCCGC+AGG - chr3_2:84339787-84339806 Msa0432180:CDS 60.0%
! GCCTCGGGTTGTTTGGTCTG+TGG - chr3_2:84339927-84339946 Msa0432180:CDS 60.0%
GAACGTGGCAAGCCATCTCC+AGG - chr3_2:84340329-84340348 Msa0432180:CDS 60.0%
CCCAACTGAAGAAGCCCCGA+AGG + chr3_2:84340643-84340662 None:intergenic 60.0%
CCAGGATACCCCGCTTGCAA+GGG + chr3_2:84341171-84341190 None:intergenic 60.0%
ACCAGGATACCCCGCTTGCA+AGG + chr3_2:84341172-84341191 None:intergenic 60.0%
! TTGCAAGCGGGGTATCCTGG+TGG - chr3_2:84341171-84341190 Msa0432180:intron 60.0%
GTCCTTCCCTCGAGAGCAGG+AGG + chr3_2:84338947-84338966 None:intergenic 65.0%
CGAGGGAAGGACCCCTCTCA+AGG - chr3_2:84338955-84338974 Msa0432180:intron 65.0%
GAAGGACCCCTCTCAAGGGG+AGG - chr3_2:84338960-84338979 Msa0432180:intron 65.0%
AGGAGGCCTCCCCTTGAGAG+GGG + chr3_2:84338969-84338988 None:intergenic 65.0%
GGTTAAGGAGCCCCCCTAGG+AGG + chr3_2:84339071-84339090 None:intergenic 65.0%
! CCCTTGCAAGCGGGGTATCC+TGG - chr3_2:84341168-84341187 Msa0432180:intron 65.0%
GGGGTCCTTCCCTCGAGAGC+AGG + chr3_2:84338950-84338969 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 84338006 84342665 84338006 ID=Msa0432180;Name=Msa0432180
chr3_2 mRNA 84338006 84342665 84338006 ID=Msa0432180-mRNA-1;Parent=Msa0432180;Name=Msa0432180-mRNA-1;_AED=0.05;_eAED=0.05;_QI=137|0.83|0.71|1|0.83|0.57|7|758|539
chr3_2 exon 84338006 84338526 84338006 ID=Msa0432180-mRNA-1:exon:23847;Parent=Msa0432180-mRNA-1
chr3_2 exon 84339111 84340235 84339111 ID=Msa0432180-mRNA-1:exon:23846;Parent=Msa0432180-mRNA-1
chr3_2 exon 84340321 84340397 84340321 ID=Msa0432180-mRNA-1:exon:23845;Parent=Msa0432180-mRNA-1
chr3_2 exon 84340674 84340904 84340674 ID=Msa0432180-mRNA-1:exon:23844;Parent=Msa0432180-mRNA-1
chr3_2 exon 84340914 84341072 84340914 ID=Msa0432180-mRNA-1:exon:23843;Parent=Msa0432180-mRNA-1
chr3_2 exon 84341208 84341360 84341208 ID=Msa0432180-mRNA-1:exon:23842;Parent=Msa0432180-mRNA-1
chr3_2 exon 84342417 84342665 84342417 ID=Msa0432180-mRNA-1:exon:23841;Parent=Msa0432180-mRNA-1
chr3_2 five_prime_UTR 84342529 84342665 84342529 ID=Msa0432180-mRNA-1:five_prime_utr;Parent=Msa0432180-mRNA-1
chr3_2 CDS 84342417 84342528 84342417 ID=Msa0432180-mRNA-1:cds;Parent=Msa0432180-mRNA-1
chr3_2 CDS 84341208 84341360 84341208 ID=Msa0432180-mRNA-1:cds;Parent=Msa0432180-mRNA-1
chr3_2 CDS 84340914 84341072 84340914 ID=Msa0432180-mRNA-1:cds;Parent=Msa0432180-mRNA-1
chr3_2 CDS 84340674 84340904 84340674 ID=Msa0432180-mRNA-1:cds;Parent=Msa0432180-mRNA-1
chr3_2 CDS 84340321 84340397 84340321 ID=Msa0432180-mRNA-1:cds;Parent=Msa0432180-mRNA-1
chr3_2 CDS 84339348 84340235 84339348 ID=Msa0432180-mRNA-1:cds;Parent=Msa0432180-mRNA-1
chr3_2 three_prime_UTR 84339111 84339347 84339111 ID=Msa0432180-mRNA-1:three_prime_utr;Parent=Msa0432180-mRNA-1
chr3_2 three_prime_UTR 84338006 84338526 84338006 ID=Msa0432180-mRNA-1:three_prime_utr;Parent=Msa0432180-mRNA-1
Gene Sequence

>Msa0432180

ATGGATGATTCCGGTGACCGTTTTCCCATCGGAATGCGTGTTCTCGCCGTTGACGACGATCCAACTTGTCTCATGGTTTTGGAAACTCTTCTCCGTAGATGTCAATACCACGTAACCACAACTAGTCAAGCAATAACAGCGTTGACCATGTTGAGAGAAAACAAAGACAAGTTTGACCTGGTAATCAGTGATGTGCACATGCCTGACATGGATGGATTTAAGCTGCTTGAACTTGTGGGACTTGAAATGGACCTTCCCGTCATAATGTTGTCTGCATATGGTGATACAAAGCTGGTGATGAAAGGAATTTCCCATGGTGCCTGTGATTATCTGCTGAAACCTGTGAGATTAGAGGAGCTAAAGAACATTTGGCAGCATGTAATTAGGAAGAAGAAGTCTGATCCAAAGGAGAAAAACAAAACCAACAAAACTACTTCTGATAGTGGCAGTGGACTAAGATCCGCAGGAGCAGAAAATTCAGATGAAAATGGAAAGCTGACTAAGAAAAGAAAGGATCAGGATGAAGACGAAGATGAGGATAAAGAGAATGGTAATGACAACGAGGACCCATCAGCTCAGAAGAAGCCTCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAAGGCTGTGCCCAAAAAAATTCTTGATATGATGAATGTCGAAAATATCACAAGGGAGAACGTGGCAAGCCATCTCCAGAAGTATAGACTTTATCTGAAAAGAATTAGCTGTGTTGCAAACCAACAAGCTAGTATGGTGGCAGCCTTAGGGAGTGCAGATCAATCTTATTTGAGAATGGGTGGTTCTGGACATTTTCACAATAATGCTTTCAGATCCTTTTCACCTAGTGGGATAATTGGTAATCTGAACACTCCAACTAGTCTTAACGGGCATGGATTTTCTCCTTCGGGGCTTCTTCAGTTGGGCCAATCACGTAATTTAAACAATTCTTCCAATGATCAACTTAAATTCCAGTCAGCCATAACTCCCGTTAATCAGAATATTCTTCAGGGAATGCCAATGTCCATAGGGTTTGATCACTTGCAAAACAGCAAGGGTGTTATCTCTGTTCAAAACCTGAATACTGATGTGAAAACAACTTTTCCCATCCCAAATAAATTCCCGGATCAACGGCCAAGTTTTGCCACCTCTAGTTCTCATCCCCCAAGTCTCGGTATCTCAAACAATGGCTTGATGTCGGATACGCACCCTGAAAGAAAACACGGAGGTATAGGAATAGGATATGGAAGTTCATCTTCTTCAGTAGCCTCTCAACATTCAGAATTTTCTTTCTCTATGCTGGATCAAGGTAGGCACGGTGATAATTGGTCAAGCGACGTGCCGTTATCTGGAATCCAAACAAATTCTTTCTCTTCAAGTGAATGTTTTAGACAGACAGCTGTTCCTCCTTCAGATAACATGGCTTCTTTGCCCTTGCAAGCGGGGTATCCTGGTGGTTCGTTGCCAGATATGCACTCCCAAGGAATGATTTTTACTAATTCACCTGAGTATATAAACGGTAATTTGCCATTTCAAGGATGGGAAGACCGTAATCAGGATGCTACTTACCACTCAAATGTTACTTGA
Protein sequence

>Msa0432180

MDDSGDRFPIGMRVLAVDDDPTCLMVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQHVIRKKKSDPKEKNKTNKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKENGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASHLQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGGSGHFHNNAFRSFSPSGIIGNLNTPTSLNGHGFSPSGLLQLGQSRNLNNSSNDQLKFQSAITPVNQNILQGMPMSIGFDHLQNSKGVISVQNLNTDVKTTFPIPNKFPDQRPSFATSSSHPPSLGISNNGLMSDTHPERKHGGIGIGYGSSSSSVASQHSEFSFSMLDQGRHGDNWSSDVPLSGIQTNSFSSSECFRQTAVPPSDNMASLPLQAGYPGGSLPDMHSQGMIFTNSPEYINGNLPFQGWEDRNQDATYHSNVT*