Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0432830 | XP_003603464.1 | 95.913 | 416 | 14 | 2 | 1 | 413 | 1 | 416 | 0.0 | 800 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0432830 | sp|Q84MB2|TIF8_ARATH | 39.409 | 406 | 150 | 15 | 26 | 408 | 27 | 359 | 2.63e-50 | 176 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0432830 | G7JBP9 | 95.913 | 416 | 14 | 2 | 1 | 413 | 1 | 416 | 0.0 | 800 |
Gene ID | Type | Classification |
---|---|---|
Msa0432830 | TF | Tify |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0432830 | Msa1450170 | 0.993169 | 6.548226e-198 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0432830 | MtrunA17_Chr3g0138401 | 95.913 | 416 | 14 | 2 | 1 | 413 | 1 | 416 | 0.0 | 800 |
Msa0432830 | MtrunA17_Chr4g0005121 | 91.429 | 70 | 5 | 1 | 1 | 70 | 1 | 69 | 5.44e-30 | 110 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0432830 | AT4G32570.1 | 39.409 | 406 | 150 | 15 | 26 | 408 | 27 | 359 | 2.67e-51 | 176 |
Msa0432830 | AT4G32570.2 | 40.717 | 307 | 97 | 9 | 26 | 315 | 27 | 265 | 9.30e-50 | 172 |
Find 148 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAATTCTGATTCCTCATTTA+TGG | 0.101310 | 3_2:-85065547 | Msa0432830:CDS |
CTAAGATTGATGCGAATAAA+TGG | 0.197424 | 3_2:-85065224 | Msa0432830:CDS |
TCTTATTTCTGATTATTTAT+TGG | 0.205262 | 3_2:-85062032 | Msa0432830:three_prime_UTR |
ATCAGTAGCAGCGGTGTTTA+TGG | 0.205391 | 3_2:+85065011 | None:intergenic |
CTTATTTCTGATTATTTATT+GGG | 0.217535 | 3_2:-85062031 | Msa0432830:three_prime_UTR |
TCCACCTCCGAAACCGTTTC+TGG | 0.230412 | 3_2:-85066243 | Msa0432830:intron |
ATTATATTAGTTAGAGGTTT+TGG | 0.247280 | 3_2:+85064952 | None:intergenic |
AATTCTGATTCCTCATTTAT+GGG | 0.297898 | 3_2:-85065546 | Msa0432830:CDS |
GTTTATGGAACTTAAAATTC+CGG | 0.306770 | 3_2:+85065026 | None:intergenic |
TGTAATCAATTCAATTCAAT+TGG | 0.308257 | 3_2:+85066707 | None:intergenic |
TCTAAACCAGTCACCGTATC+AGG | 0.314944 | 3_2:-85061852 | Msa0432830:three_prime_UTR |
ACCAGCTTTGCAGTAGATTT+CGG | 0.332699 | 3_2:+85062833 | None:intergenic |
CATAGTGGAGAAAATGAAAC+AGG | 0.343306 | 3_2:-85062794 | Msa0432830:CDS |
GATTCTATTATATTAGTTAG+AGG | 0.379814 | 3_2:+85064946 | None:intergenic |
GACCATTTGAAAGGCATCTC+TGG | 0.380703 | 3_2:+85065518 | None:intergenic |
TCTCTCCTCCAGACGCATTT+CGG | 0.381595 | 3_2:+85065340 | None:intergenic |
GATGTTATAATGGCTTTGGC+TGG | 0.382975 | 3_2:-85062890 | Msa0432830:CDS |
CAGAAATAAGAGAAAGCTCT+TGG | 0.383667 | 3_2:+85062044 | None:intergenic |
TTCCACCGACGTTAGGTTAC+CGG | 0.385652 | 3_2:-85066313 | Msa0432830:CDS |
TTTATGGAACTTAAAATTCC+GGG | 0.391734 | 3_2:+85065027 | None:intergenic |
CTCGAGGGAGTTCCATTCTA+TGG | 0.400380 | 3_2:-85065630 | Msa0432830:CDS |
AACTAACTTCAAACAAGCTT+AGG | 0.400478 | 3_2:-85065122 | Msa0432830:CDS |
TGCTAAAGATACTAGAAATC+CGG | 0.405348 | 3_2:-85062162 | Msa0432830:CDS |
GGAGAAAGGGCCACGAGCAC+CGG | 0.406027 | 3_2:+85066266 | None:intergenic |
GTAATCAATTCAATTCAATT+GGG | 0.412543 | 3_2:+85066708 | None:intergenic |
TAAGCTTGTTTGAAGTTAGT+TGG | 0.412879 | 3_2:+85065124 | None:intergenic |
CATGGGAAGTTGTCTGCTAC+TGG | 0.416162 | 3_2:-85062737 | Msa0432830:CDS |
GCCACGAGCACCGGCGGAGG+AGG | 0.420220 | 3_2:+85066275 | None:intergenic |
GTGCTTACCAGAAACGGTTT+CGG | 0.424015 | 3_2:+85066236 | None:intergenic |
CGCGGAGGATGCTGCATGGA+AGG | 0.427118 | 3_2:+85065174 | None:intergenic |
AGCTATGCAGCAGAGTGAAA+TGG | 0.429562 | 3_2:-85066456 | Msa0432830:five_prime_UTR |
ATCTGGCGGCTGGCAGGTGT+TGG | 0.436258 | 3_2:+85064779 | None:intergenic |
CTGGGTCAAATGGTGGATCT+TGG | 0.437897 | 3_2:-85062871 | Msa0432830:CDS |
GGCAGATGTTATAATGGCTT+TGG | 0.438099 | 3_2:-85062894 | Msa0432830:CDS |
TGATGATGTCCACCAACATA+AGG | 0.439728 | 3_2:-85064723 | Msa0432830:intron |
GAAGTTAGTTGGTGTGCAAA+AGG | 0.439875 | 3_2:+85065135 | None:intergenic |
CAGGTCCTCCGAAATGCGTC+TGG | 0.445569 | 3_2:-85065348 | Msa0432830:CDS |
TCACTTCTTGGGCCATAGAA+TGG | 0.448253 | 3_2:+85065618 | None:intergenic |
CGCATCAATCTTAGTGTTGG+CGG | 0.457246 | 3_2:+85065233 | None:intergenic |
TCAAAACTCACATTTGATGA+AGG | 0.458213 | 3_2:-85065484 | Msa0432830:intron |
GGAGTAGATACACGGTCAAC+AGG | 0.460556 | 3_2:+85062692 | None:intergenic |
ATAGTCATCTGGCGGCTGGC+AGG | 0.466446 | 3_2:+85064773 | None:intergenic |
TATCAATTTGGTAGAAAAGC+AGG | 0.466579 | 3_2:-85065664 | Msa0432830:intron |
ACCAGAAACGGTTTCGGAGG+TGG | 0.466600 | 3_2:+85066242 | None:intergenic |
GCATTCCCACAAGAGCTTCA+TGG | 0.467087 | 3_2:-85062755 | Msa0432830:CDS |
ATGAGAAAATTTGACAAAAG+AGG | 0.468526 | 3_2:+85062002 | None:intergenic |
TATGCAGGCAGATGTTATAA+TGG | 0.469314 | 3_2:-85062900 | Msa0432830:intron |
CATTCCCACAAGAGCTTCAT+GGG | 0.469855 | 3_2:-85062754 | Msa0432830:CDS |
CTCCAGAGATGCCTTTCAAA+TGG | 0.470651 | 3_2:-85065520 | Msa0432830:CDS |
AAGCTTAGGGATACCATTGC+CGG | 0.471593 | 3_2:-85065108 | Msa0432830:CDS |
TAAGATTGATGCGAATAAAT+GGG | 0.473687 | 3_2:-85065223 | Msa0432830:CDS |
ACCGAAATCTACTGCAAAGC+TGG | 0.475875 | 3_2:-85062834 | Msa0432830:CDS |
GTTTCGGAGGTGGAGGAGAA+AGG | 0.476240 | 3_2:+85066252 | None:intergenic |
GACCGTGTATCTACTCCAAC+CGG | 0.477444 | 3_2:-85062686 | Msa0432830:intron |
AGGGCCACGAGCACCGGCGG+AGG | 0.478100 | 3_2:+85066272 | None:intergenic |
ATGGCTTTGGCTGGGTCAAA+TGG | 0.478398 | 3_2:-85062881 | Msa0432830:CDS |
CTGATACTTCCACCGACGTT+AGG | 0.478726 | 3_2:-85066320 | Msa0432830:CDS |
GCTATGCAGCAGAGTGAAAT+GGG | 0.481963 | 3_2:-85066455 | Msa0432830:five_prime_UTR |
CTGGAGGAGAGAGATCTAGA+AGG | 0.484867 | 3_2:-85065329 | Msa0432830:CDS |
GCCTCCTCCGCCGGTGCTCG+TGG | 0.487582 | 3_2:-85066276 | Msa0432830:CDS |
ATCAATGGCGGTGCTGAGAA+TGG | 0.489429 | 3_2:-85066430 | Msa0432830:exon |
GGATCTGCTGCTTGAACCGC+CGG | 0.490647 | 3_2:+85062143 | None:intergenic |
TCAGCATCAGCCTCCTCCGC+CGG | 0.490900 | 3_2:-85066285 | Msa0432830:CDS |
AGAAATAAGAGAAAGCTCTT+GGG | 0.490918 | 3_2:+85062045 | None:intergenic |
GCTGATGAAGGATCTAGAAC+TGG | 0.491143 | 3_2:-85065060 | Msa0432830:CDS |
AACTTCCCATGAAGCTCTTG+TGG | 0.491396 | 3_2:+85062749 | None:intergenic |
CTCCATAAAAGATAGTCATC+TGG | 0.496051 | 3_2:+85064762 | None:intergenic |
ACTAACTTCAAACAAGCTTA+GGG | 0.496585 | 3_2:-85065121 | Msa0432830:CDS |
GAAAATCATGGAGGAAGTGT+TGG | 0.496873 | 3_2:+85066358 | None:intergenic |
TTTCGGAGGTGGAGGAGAAA+GGG | 0.497327 | 3_2:+85066253 | None:intergenic |
GAGATAAGTAACAGACTAGT+GGG | 0.497646 | 3_2:-85065582 | Msa0432830:CDS |
ACTTCCCATGAAGCTCTTGT+GGG | 0.498210 | 3_2:+85062750 | None:intergenic |
TTAATAGTGCTTACCAGAAA+CGG | 0.500267 | 3_2:+85066230 | None:intergenic |
ATTCGCATCAATCTTAGTGT+TGG | 0.504337 | 3_2:+85065230 | None:intergenic |
GCAGGCTGAGAGATAAATGA+AGG | 0.506389 | 3_2:+85065084 | None:intergenic |
AATGACGACGAAGTGTTACT+TGG | 0.506870 | 3_2:-85065303 | Msa0432830:CDS |
AGAAGCTGCTTGACCTGATA+CGG | 0.507457 | 3_2:+85061839 | None:intergenic |
AGTAACACTTCGTCGTCATT+AGG | 0.511001 | 3_2:+85065306 | None:intergenic |
GAAAGGGCCACGAGCACCGG+CGG | 0.511791 | 3_2:+85066269 | None:intergenic |
AAAATCATGGAGGAAGTGTT+GGG | 0.513221 | 3_2:+85066359 | None:intergenic |
GGATCTAGAACTGGAATCAA+AGG | 0.514477 | 3_2:-85065051 | Msa0432830:CDS |
GAGGCTGATGCTGATGCCTC+CGG | 0.517085 | 3_2:+85066294 | None:intergenic |
TCTCAGCCTGCCGCTGATGA+AGG | 0.519106 | 3_2:-85065072 | Msa0432830:CDS |
GCATCAATCTTAGTGTTGGC+GGG | 0.522950 | 3_2:+85065234 | None:intergenic |
CTAGATCCTTCATCAGCGGC+AGG | 0.525101 | 3_2:+85065066 | None:intergenic |
CGATCTATTCTCATGAATGC+TGG | 0.527762 | 3_2:-85065198 | Msa0432830:CDS |
AAGAGTAGGATGATTGTGTA+AGG | 0.529874 | 3_2:-85061938 | Msa0432830:three_prime_UTR |
GCTTGACCTGATACGGTGAC+TGG | 0.533300 | 3_2:+85061846 | None:intergenic |
GGCAGTTCTAGCCGTGCCGT+TGG | 0.541164 | 3_2:-85062716 | Msa0432830:CDS |
ATGTTATAATGGCTTTGGCT+GGG | 0.543215 | 3_2:-85062889 | Msa0432830:CDS |
AATATCTGAGAACTAGAAGA+TGG | 0.544323 | 3_2:+85065264 | None:intergenic |
AAAGATAGTCATCTGGCGGC+TGG | 0.544851 | 3_2:+85064769 | None:intergenic |
GCATTGAACAGCAGTCAACA+TGG | 0.551557 | 3_2:-85064803 | Msa0432830:intron |
CTGAGAGATAAATGAAGGGC+CGG | 0.554107 | 3_2:+85065089 | None:intergenic |
GCTTCATGCCGAGAAAATCA+TGG | 0.554318 | 3_2:+85066346 | None:intergenic |
GATAAATGAAGGGCCGGCAA+TGG | 0.555598 | 3_2:+85065095 | None:intergenic |
ATTTCATCTGTGGTGTTGCT+CGG | 0.555835 | 3_2:-85064985 | Msa0432830:CDS |
GCGGAGGATGCTGCATGGAA+GGG | 0.560490 | 3_2:+85065175 | None:intergenic |
ATAGTTAGAATCAGAACGAT+AGG | 0.566772 | 3_2:-85061778 | Msa0432830:three_prime_UTR |
AGAACTGGAATCAAAGGCCC+CGG | 0.567203 | 3_2:-85065045 | Msa0432830:CDS |
TAATCAATTCAATTCAATTG+GGG | 0.572167 | 3_2:+85066709 | None:intergenic |
AGAGTGAAATGGGTAATCAA+TGG | 0.572299 | 3_2:-85066445 | Msa0432830:exon |
AGAAACGGTTTCGGAGGTGG+AGG | 0.574883 | 3_2:+85066245 | None:intergenic |
AATGATAGTAACTTGCATAG+TGG | 0.579416 | 3_2:-85062809 | Msa0432830:CDS |
TCTGGAGGAACCCATAAATG+AGG | 0.581916 | 3_2:+85065536 | None:intergenic |
TCCACGCGGAGGATGCTGCA+TGG | 0.586678 | 3_2:+85065170 | None:intergenic |
GAGGTCAGACCTTATGTTGG+TGG | 0.592305 | 3_2:+85064714 | None:intergenic |
GCTTTGGCTGGGTCAAATGG+TGG | 0.593671 | 3_2:-85062878 | Msa0432830:CDS |
GGTCAACAGGTCCAACGGCA+CGG | 0.599017 | 3_2:+85062705 | None:intergenic |
GGAATCAGGGACCATTTGAA+AGG | 0.601761 | 3_2:+85065509 | None:intergenic |
TACACGGTCAACAGGTCCAA+CGG | 0.603243 | 3_2:+85062700 | None:intergenic |
CTCCTCCAGACGCATTTCGG+AGG | 0.605747 | 3_2:+85065343 | None:intergenic |
CCGGTTGTAGGGGTACATCA+AGG | 0.607519 | 3_2:-85062194 | Msa0432830:intron |
AACGTCGGTGGAAGTATCAG+TGG | 0.609086 | 3_2:+85066323 | None:intergenic |
GTCCTCCGAAATGCGTCTGG+AGG | 0.623376 | 3_2:-85065345 | Msa0432830:CDS |
ATTATGTGGGAAACAAGAGT+AGG | 0.623513 | 3_2:-85061952 | Msa0432830:three_prime_UTR |
TGAGATAAGTAACAGACTAG+TGG | 0.631355 | 3_2:-85065583 | Msa0432830:CDS |
CTTACCAGAAACGGTTTCGG+AGG | 0.633124 | 3_2:+85066239 | None:intergenic |
ATGCAGCATCCTCCGCGTGG+AGG | 0.635328 | 3_2:-85065168 | Msa0432830:CDS |
TACTGATAAAATTTCATCTG+TGG | 0.635799 | 3_2:-85064995 | Msa0432830:CDS |
CATTTGAAAGGCATCTCTGG+AGG | 0.646720 | 3_2:+85065521 | None:intergenic |
CACCGACGTTAGGTTACCGG+AGG | 0.647418 | 3_2:-85066310 | Msa0432830:CDS |
CAGGTATCGAATCATCTCGA+GGG | 0.650968 | 3_2:-85065645 | Msa0432830:CDS |
TACGAGGTCAGACCTTATGT+TGG | 0.651133 | 3_2:+85064711 | None:intergenic |
AGTTCTAGATCCTTCATCAG+CGG | 0.651396 | 3_2:+85065062 | None:intergenic |
CATTGAACAGCAGTCAACAT+GGG | 0.652838 | 3_2:-85064802 | Msa0432830:intron |
GTAAGAGGAAAAGCTGACAA+AGG | 0.654301 | 3_2:-85066733 | None:intergenic |
CTCCGGTAACCTAACGTCGG+TGG | 0.654776 | 3_2:+85066311 | None:intergenic |
ACGTCGGTGGAAGTATCAGT+GGG | 0.655076 | 3_2:+85066324 | None:intergenic |
GCAGGTATCGAATCATCTCG+AGG | 0.661921 | 3_2:-85065646 | Msa0432830:CDS |
TTATGGAACTTAAAATTCCG+GGG | 0.662736 | 3_2:+85065028 | None:intergenic |
TCAATCTTAGTGTTGGCGGG+AGG | 0.664926 | 3_2:+85065237 | None:intergenic |
CATAAAAGATAGTCATCTGG+CGG | 0.666315 | 3_2:+85064765 | None:intergenic |
GTTGTTAGAAAATGTAGTTG+TGG | 0.667971 | 3_2:+85066569 | None:intergenic |
TCCATGCAGCATCCTCCGCG+TGG | 0.673722 | 3_2:-85065171 | Msa0432830:CDS |
CAGGCTGAGAGATAAATGAA+GGG | 0.676282 | 3_2:+85065085 | None:intergenic |
GTCAACTGTCCTCCACGCGG+AGG | 0.679890 | 3_2:+85065159 | None:intergenic |
TCATCTGTGGTGTTGCTCGG+TGG | 0.681028 | 3_2:-85064982 | Msa0432830:CDS |
AACAGGGTTAGTGAGTAATG+TGG | 0.689431 | 3_2:-85062777 | Msa0432830:CDS |
GTGAAATGGGTAATCAATGG+CGG | 0.690764 | 3_2:-85066442 | Msa0432830:exon |
TACCGGTTGGAGTAGATACA+CGG | 0.691538 | 3_2:+85062684 | None:intergenic |
TGCCTCCGGTAACCTAACGT+CGG | 0.705158 | 3_2:+85066308 | None:intergenic |
ATAAGATAGATTTACCTTGG+GGG | 0.712059 | 3_2:+85064916 | None:intergenic |
TAAAGATACTAGAAATCCGG+CGG | 0.716386 | 3_2:-85062159 | Msa0432830:CDS |
ATAGTGGAGAAAATGAAACA+GGG | 0.722474 | 3_2:-85062793 | Msa0432830:CDS |
AGATAAGTAACAGACTAGTG+GGG | 0.741446 | 3_2:-85065581 | Msa0432830:CDS |
GGAGTCAACTGTCCTCCACG+CGG | 0.758189 | 3_2:+85065156 | None:intergenic |
TCATGCCGAGAAAATCATGG+AGG | 0.774525 | 3_2:+85066349 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAAAAAAAAAAAAAAAATTG+AGG | + | chr3_2:85062381-85062400 | None:intergenic | 10.0% |
!!! | ATATAATGATATGAATTTTT+AGG | - | chr3_2:85062639-85062658 | Msa0432830:intron | 10.0% |
!! | ATCTATGAATTTAAAAAATT+CGG | - | chr3_2:85063832-85063851 | Msa0432830:intron | 10.0% |
!!! | CTTTTTCTATTAAATATTAT+AGG | + | chr3_2:85064039-85064058 | None:intergenic | 10.0% |
!!! | AAATGATTTTAATGAAAAAT+TGG | + | chr3_2:85065343-85065362 | None:intergenic | 10.0% |
!!! | ATTTTTCATTAAAATCATTT+AGG | - | chr3_2:85065343-85065362 | Msa0432830:CDS | 10.0% |
!!! | TTTTTCATTAAAATCATTTA+GGG | - | chr3_2:85065344-85065363 | Msa0432830:CDS | 10.0% |
!! | AATAAAAAAAATCAAACAAG+GGG | + | chr3_2:85062288-85062307 | None:intergenic | 15.0% |
!! | CAATAAAAAAAATCAAACAA+GGG | + | chr3_2:85062289-85062308 | None:intergenic | 15.0% |
!! | TCAATAAAAAAAATCAAACA+AGG | + | chr3_2:85062290-85062309 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTTTTGTGTCTA+TGG | - | chr3_2:85062387-85062406 | Msa0432830:intron | 15.0% |
!!! | TTTTTTATACTGAATGTATT+TGG | - | chr3_2:85064172-85064191 | Msa0432830:intron | 15.0% |
!!! | AAATTCTCTAAAAAAATGTT+TGG | - | chr3_2:85064333-85064352 | Msa0432830:intron | 15.0% |
!! | TACATGTTAAAAAATCTATT+GGG | + | chr3_2:85064956-85064975 | None:intergenic | 15.0% |
!! | ATACATGTTAAAAAATCTAT+TGG | + | chr3_2:85064957-85064976 | None:intergenic | 15.0% |
!! | AAAGATCAAAGAAAATAAAT+AGG | + | chr3_2:85065392-85065411 | None:intergenic | 15.0% |
!!! | CTGTTTAATTTTTTATTATC+CGG | - | chr3_2:85066247-85066266 | Msa0432830:CDS | 15.0% |
!!! | TTTTTATGTTCATATTCAAT+GGG | - | chr3_2:85066389-85066408 | Msa0432830:CDS | 15.0% |
!!! | TCTTATTTCTGATTATTTAT+TGG | - | chr3_2:85066428-85066447 | Msa0432830:CDS | 15.0% |
!!! | CTTATTTCTGATTATTTATT+GGG | - | chr3_2:85066429-85066448 | Msa0432830:CDS | 15.0% |
!! | TTGAAAAAAAAAGATTATGT+GGG | - | chr3_2:85066495-85066514 | Msa0432830:five_prime_UTR | 15.0% |
!!! | GCAATATAAAATGTTTTTTA+CGG | + | chr3_2:85066584-85066603 | None:intergenic | 15.0% |
!!! | AGAATGAATATAACAATTTT+TGG | - | chr3_2:85066707-85066726 | Msa0432830:five_prime_UTR | 15.0% |
!!! | ACAATTTTTGGTTTAAAAAA+TGG | - | chr3_2:85066719-85066738 | Msa0432830:five_prime_UTR | 15.0% |
!! | TAATCAATTCAATTCAATTG+GGG | + | chr3_2:85061754-85061773 | None:intergenic | 20.0% |
!! | GTAATCAATTCAATTCAATT+GGG | + | chr3_2:85061755-85061774 | None:intergenic | 20.0% |
!! | TGTAATCAATTCAATTCAAT+TGG | + | chr3_2:85061756-85061775 | None:intergenic | 20.0% |
!! | ATAAAAAAAATCAAACAAGG+GGG | + | chr3_2:85062287-85062306 | None:intergenic | 20.0% |
!!! | CTTTATTTTGATTTGTAGTA+TGG | - | chr3_2:85062483-85062502 | Msa0432830:intron | 20.0% |
!!! | AAAGTTTTGTGTTCAAAAAA+TGG | + | chr3_2:85062587-85062606 | None:intergenic | 20.0% |
!!! | GTTTCTATGTTTTCTTTAAA+TGG | - | chr3_2:85062754-85062773 | Msa0432830:CDS | 20.0% |
!!! | ATTATATTAGTTAGAGGTTT+TGG | + | chr3_2:85063511-85063530 | None:intergenic | 20.0% |
!! | GATTCTATTATATTAGTTAG+AGG | + | chr3_2:85063517-85063536 | None:intergenic | 20.0% |
!! | ATATAAGATAGATTTACCTT+GGG | + | chr3_2:85063549-85063568 | None:intergenic | 20.0% |
!! | TATATAAGATAGATTTACCT+TGG | + | chr3_2:85063550-85063569 | None:intergenic | 20.0% |
!! | AGTGAAAATAAATAGAATCA+AGG | + | chr3_2:85063590-85063609 | None:intergenic | 20.0% |
!!! | TTCTTCATCTTATTTTTTCT+AGG | - | chr3_2:85064256-85064275 | Msa0432830:intron | 20.0% |
!! | AAATACTTATACAAATGACT+AGG | + | chr3_2:85064770-85064789 | None:intergenic | 20.0% |
!! | TAGTCATTTGTATAAGTATT+TGG | - | chr3_2:85064769-85064788 | Msa0432830:CDS | 20.0% |
!! | TAGACTTGATGTATAAATAT+TGG | - | chr3_2:85065189-85065208 | Msa0432830:CDS | 20.0% |
!! | TTCTAAATTCATCAGAATAT+TGG | - | chr3_2:85066105-85066124 | Msa0432830:intron | 20.0% |
!!! | GTTTTTATGTTCATATTCAA+TGG | - | chr3_2:85066388-85066407 | Msa0432830:CDS | 20.0% |
!!! | CACATAATCTTTTTTTTTCA+AGG | + | chr3_2:85066496-85066515 | None:intergenic | 20.0% |
!! | CTTGAAAAAAAAAGATTATG+TGG | - | chr3_2:85066494-85066513 | Msa0432830:five_prime_UTR | 20.0% |
!!! | TTTTTTTGTGTCTATGGATT+TGG | - | chr3_2:85062393-85062412 | Msa0432830:intron | 25.0% |
!! | CAAATTTATGGTCATGATTT+TGG | - | chr3_2:85062459-85062478 | Msa0432830:intron | 25.0% |
! | GATTTGATTATTTGTTTCCA+TGG | - | chr3_2:85062511-85062530 | Msa0432830:intron | 25.0% |
! | CTCACTTTAAATTATTTCCA+TGG | + | chr3_2:85062531-85062550 | None:intergenic | 25.0% |
!! | TTGTCTGATTTTTCTTTTCT+TGG | - | chr3_2:85062676-85062695 | Msa0432830:intron | 25.0% |
!! | TTTTCTACCAAATTGATAAG+GGG | + | chr3_2:85062794-85062813 | None:intergenic | 25.0% |
!! | CTTTTCTACCAAATTGATAA+GGG | + | chr3_2:85062795-85062814 | None:intergenic | 25.0% |
! | TAATTCTGATTCCTCATTTA+TGG | - | chr3_2:85062913-85062932 | Msa0432830:intron | 25.0% |
! | AATTCTGATTCCTCATTTAT+GGG | - | chr3_2:85062914-85062933 | Msa0432830:intron | 25.0% |
!!! | CAAAAGTGTTTTTCTTCTTT+TGG | + | chr3_2:85063049-85063068 | None:intergenic | 25.0% |
! | TAAGATTGATGCGAATAAAT+GGG | - | chr3_2:85063237-85063256 | Msa0432830:intron | 25.0% |
! | TTTATGGAACTTAAAATTCC+GGG | + | chr3_2:85063436-85063455 | None:intergenic | 25.0% |
! | GTTTATGGAACTTAAAATTC+CGG | + | chr3_2:85063437-85063456 | None:intergenic | 25.0% |
! | TACTGATAAAATTTCATCTG+TGG | - | chr3_2:85063465-85063484 | Msa0432830:intron | 25.0% |
! | TATAAGATAGATTTACCTTG+GGG | + | chr3_2:85063548-85063567 | None:intergenic | 25.0% |
! | TTACTGCATTTAGTGAAATT+AGG | - | chr3_2:85063793-85063812 | Msa0432830:intron | 25.0% |
! | CATAGATACAAACTAATTTC+AGG | + | chr3_2:85063819-85063838 | None:intergenic | 25.0% |
! | CAGTTAAATTTAAACTCATC+AGG | - | chr3_2:85063901-85063920 | Msa0432830:intron | 25.0% |
! | AGCTTAAGCAAATGTATTAT+TGG | + | chr3_2:85064074-85064093 | None:intergenic | 25.0% |
! | TAATACATTTGCTTAAGCTT+TGG | - | chr3_2:85064075-85064094 | Msa0432830:intron | 25.0% |
! | AATACATTTGCTTAAGCTTT+GGG | - | chr3_2:85064076-85064095 | Msa0432830:intron | 25.0% |
! | TATTTGGATGATAGTTTCTA+TGG | - | chr3_2:85064188-85064207 | Msa0432830:intron | 25.0% |
! | TAGTATATAAAGTCAGCTTA+GGG | - | chr3_2:85064229-85064248 | Msa0432830:intron | 25.0% |
! | GACTTAAAAATTAACAGAGT+TGG | - | chr3_2:85064494-85064513 | Msa0432830:intron | 25.0% |
!! | CATTGCATTTAAGTTACATT+TGG | - | chr3_2:85064717-85064736 | Msa0432830:intron | 25.0% |
! | ATAAGCTGAAAACAACTTAT+AGG | + | chr3_2:85064823-85064842 | None:intergenic | 25.0% |
! | GAATATTCTGATTTCTAAGT+GGG | - | chr3_2:85064999-85065018 | Msa0432830:CDS | 25.0% |
! | AATATTCTGATTTCTAAGTG+GGG | - | chr3_2:85065000-85065019 | Msa0432830:CDS | 25.0% |
!!! | TCTTTCTCGTTTTATTGAAA+TGG | + | chr3_2:85065072-85065091 | None:intergenic | 25.0% |
!! | TTTTTAATCAAAATCCAGTG+AGG | - | chr3_2:85065237-85065256 | Msa0432830:CDS | 25.0% |
! | GTATTATCATACCTTCAAAT+TGG | - | chr3_2:85065849-85065868 | Msa0432830:intron | 25.0% |
!! | TGATTGTTCAAAGCTAATTT+TGG | + | chr3_2:85065998-85066017 | None:intergenic | 25.0% |
! | AATCAAGAAAATATTCGAGT+TGG | + | chr3_2:85066161-85066180 | None:intergenic | 25.0% |
!!! | ATTTTTTATTATCCGGTTGT+AGG | - | chr3_2:85066254-85066273 | Msa0432830:CDS | 25.0% |
!!! | TTTTTTATTATCCGGTTGTA+GGG | - | chr3_2:85066255-85066274 | Msa0432830:CDS | 25.0% |
! | ATGAGAAAATTTGACAAAAG+AGG | + | chr3_2:85066461-85066480 | None:intergenic | 25.0% |
!! | CTGTTGTTGGTTGATTTTAA+TGG | + | chr3_2:85061865-85061884 | None:intergenic | 30.0% |
GTTGTTAGAAAATGTAGTTG+TGG | + | chr3_2:85061894-85061913 | None:intergenic | 30.0% | |
TTTCAGAGTGAAAAAGCAAA+AGG | + | chr3_2:85061929-85061948 | None:intergenic | 30.0% | |
TTAATAGTGCTTACCAGAAA+CGG | + | chr3_2:85062233-85062252 | None:intergenic | 30.0% | |
TGGAAAGTAAAGAACTTTAG+TGG | + | chr3_2:85062325-85062344 | None:intergenic | 30.0% | |
!! | TTGGTTTGTTTCAAGTTAGT+TGG | - | chr3_2:85062412-85062431 | Msa0432830:intron | 30.0% |
TCTTGGTTTCTTACTTATTC+TGG | - | chr3_2:85062693-85062712 | Msa0432830:CDS | 30.0% | |
! | TGTTTTTCCCCTTATCAATT+TGG | - | chr3_2:85062784-85062803 | Msa0432830:CDS | 30.0% |
! | GCTTTTCTACCAAATTGATA+AGG | + | chr3_2:85062796-85062815 | None:intergenic | 30.0% |
TATCAATTTGGTAGAAAAGC+AGG | - | chr3_2:85062796-85062815 | Msa0432830:CDS | 30.0% | |
!!! | CATCAAATGTGAGTTTTGAA+AGG | + | chr3_2:85062975-85062994 | None:intergenic | 30.0% |
TCAAAACTCACATTTGATGA+AGG | - | chr3_2:85062976-85062995 | Msa0432830:intron | 30.0% | |
!! | CTTTTGGCTATTGAATATGT+TGG | + | chr3_2:85063033-85063052 | None:intergenic | 30.0% |
AATATCTGAGAACTAGAAGA+TGG | + | chr3_2:85063199-85063218 | None:intergenic | 30.0% | |
CTAAGATTGATGCGAATAAA+TGG | - | chr3_2:85063236-85063255 | Msa0432830:intron | 30.0% | |
! | TAAGCTTGTTTGAAGTTAGT+TGG | + | chr3_2:85063339-85063358 | None:intergenic | 30.0% |
AACTAACTTCAAACAAGCTT+AGG | - | chr3_2:85063338-85063357 | Msa0432830:intron | 30.0% | |
ACTAACTTCAAACAAGCTTA+GGG | - | chr3_2:85063339-85063358 | Msa0432830:intron | 30.0% | |
TTATGGAACTTAAAATTCCG+GGG | + | chr3_2:85063435-85063454 | None:intergenic | 30.0% | |
! | TGAAATTTTATCAGTAGCAG+CGG | + | chr3_2:85063461-85063480 | None:intergenic | 30.0% |
ATAAGATAGATTTACCTTGG+GGG | + | chr3_2:85063547-85063566 | None:intergenic | 30.0% | |
! | TTAATCGACGTTATGCATTT+TGG | - | chr3_2:85063635-85063654 | Msa0432830:intron | 30.0% |
AATGATCCTTAAATCAACCA+CGG | + | chr3_2:85063870-85063889 | None:intergenic | 30.0% | |
CGACTATCAATACCATATTT+CGG | + | chr3_2:85063933-85063952 | None:intergenic | 30.0% | |
!! | CGAAATATGGTATTGATAGT+CGG | - | chr3_2:85063931-85063950 | Msa0432830:intron | 30.0% |
! | AAACAGTCTTTTTCTCTTAC+TGG | - | chr3_2:85064122-85064141 | Msa0432830:intron | 30.0% |
CTAGTATATAAAGTCAGCTT+AGG | - | chr3_2:85064228-85064247 | Msa0432830:intron | 30.0% | |
TGAAAACTTCCAAATTTCAG+CGG | + | chr3_2:85064313-85064332 | None:intergenic | 30.0% | |
CGAATCCATCAAGAAATTTA+AGG | - | chr3_2:85064469-85064488 | Msa0432830:intron | 30.0% | |
CTACTATAAGACTAGAGTTT+GGG | + | chr3_2:85064915-85064934 | None:intergenic | 30.0% | |
ACTACTATAAGACTAGAGTT+TGG | + | chr3_2:85064916-85064935 | None:intergenic | 30.0% | |
GGAATATTCTGATTTCTAAG+TGG | - | chr3_2:85064998-85065017 | Msa0432830:CDS | 30.0% | |
! | TGTTGCTTGATATTGCTTAT+TGG | - | chr3_2:85065124-85065143 | Msa0432830:CDS | 30.0% |
!! | TAGGGCAAACTCATTTTTAT+AGG | - | chr3_2:85065362-85065381 | Msa0432830:intron | 30.0% |
!! | TCTTTGTCTAGTTCTTGTAA+TGG | - | chr3_2:85065411-85065430 | Msa0432830:intron | 30.0% |
! | AATGATAGTAACTTGCATAG+TGG | - | chr3_2:85065651-85065670 | Msa0432830:CDS | 30.0% |
! | ATAGTGGAGAAAATGAAACA+GGG | - | chr3_2:85065667-85065686 | Msa0432830:intron | 30.0% |
GCATACTACATAGTTTGATT+TGG | - | chr3_2:85065807-85065826 | Msa0432830:intron | 30.0% | |
AAGAAAAGGATGACACAAAA+AGG | + | chr3_2:85066067-85066086 | None:intergenic | 30.0% | |
TCTGATGAATTTAGAAAGCA+AGG | + | chr3_2:85066101-85066120 | None:intergenic | 30.0% | |
!! | AGAAAATATTCGAGTTGGTT+CGG | + | chr3_2:85066156-85066175 | None:intergenic | 30.0% |
AGAAGACGAGAAATTTCATA+TGG | + | chr3_2:85066200-85066219 | None:intergenic | 30.0% | |
! | TTTTTATTATCCGGTTGTAG+GGG | - | chr3_2:85066256-85066275 | Msa0432830:CDS | 30.0% |
TGCTAAAGATACTAGAAATC+CGG | - | chr3_2:85066298-85066317 | Msa0432830:CDS | 30.0% | |
AGAAATAAGAGAAAGCTCTT+GGG | + | chr3_2:85066418-85066437 | None:intergenic | 30.0% | |
ATAGTTAGAATCAGAACGAT+AGG | - | chr3_2:85066682-85066701 | Msa0432830:five_prime_UTR | 30.0% | |
AGAGTGAAATGGGTAATCAA+TGG | - | chr3_2:85062015-85062034 | Msa0432830:three_prime_UTR | 35.0% | |
ACAACAACAACAACATCAGT+GGG | - | chr3_2:85062077-85062096 | Msa0432830:three_prime_UTR | 35.0% | |
!! | AAAATCATGGAGGAAGTGTT+GGG | + | chr3_2:85062104-85062123 | None:intergenic | 35.0% |
!!! | TCCATTTTTTCTTCTCTCAG+TGG | - | chr3_2:85062341-85062360 | Msa0432830:intron | 35.0% |
!!! | CCATTTTTTCTTCTCTCAGT+GGG | - | chr3_2:85062342-85062361 | Msa0432830:intron | 35.0% |
ACCATAAATTTGCATACCAG+GGG | + | chr3_2:85062451-85062470 | None:intergenic | 35.0% | |
GACCATAAATTTGCATACCA+GGG | + | chr3_2:85062452-85062471 | None:intergenic | 35.0% | |
TGACCATAAATTTGCATACC+AGG | + | chr3_2:85062453-85062472 | None:intergenic | 35.0% | |
TCATGTGAATGTTTGTGCAT+TGG | - | chr3_2:85062613-85062632 | Msa0432830:intron | 35.0% | |
CATGTGAATGTTTGTGCATT+GGG | - | chr3_2:85062614-85062633 | Msa0432830:intron | 35.0% | |
TGCCAGAAAAATCACTTCTT+GGG | + | chr3_2:85062856-85062875 | None:intergenic | 35.0% | |
TGAGATAAGTAACAGACTAG+TGG | - | chr3_2:85062877-85062896 | Msa0432830:CDS | 35.0% | |
GAGATAAGTAACAGACTAGT+GGG | - | chr3_2:85062878-85062897 | Msa0432830:CDS | 35.0% | |
AGATAAGTAACAGACTAGTG+GGG | - | chr3_2:85062879-85062898 | Msa0432830:CDS | 35.0% | |
!!! | GTGAGTTTTGAAAGGAATCA+GGG | + | chr3_2:85062967-85062986 | None:intergenic | 35.0% |
!!! | TGTGAGTTTTGAAAGGAATC+AGG | + | chr3_2:85062968-85062987 | None:intergenic | 35.0% |
TTGGCTATTGAATATGTTGG+AGG | + | chr3_2:85063030-85063049 | None:intergenic | 35.0% | |
ATTCGCATCAATCTTAGTGT+TGG | + | chr3_2:85063233-85063252 | None:intergenic | 35.0% | |
! | TATTTTCACTCCCTTTACGT+TGG | - | chr3_2:85063600-85063619 | Msa0432830:intron | 35.0% |
CATAAAAGATAGTCATCTGG+CGG | + | chr3_2:85063698-85063717 | None:intergenic | 35.0% | |
CTCCATAAAAGATAGTCATC+TGG | + | chr3_2:85063701-85063720 | None:intergenic | 35.0% | |
! | CAGATGACTATCTTTTATGG+AGG | - | chr3_2:85063699-85063718 | Msa0432830:intron | 35.0% |
TATGACACGTTAAGAATACG+AGG | + | chr3_2:85063768-85063787 | None:intergenic | 35.0% | |
! | ACAGCAACATAAGTGTTGTA+CGG | + | chr3_2:85063966-85063985 | None:intergenic | 35.0% |
AAAACTTCCAAATTTCAGCG+GGG | + | chr3_2:85064311-85064330 | None:intergenic | 35.0% | |
GAAAACTTCCAAATTTCAGC+GGG | + | chr3_2:85064312-85064331 | None:intergenic | 35.0% | |
GTCAGCCTTAAATTTCTTGA+TGG | + | chr3_2:85064477-85064496 | None:intergenic | 35.0% | |
TGCAACCTATGTTGTATTGA+AGG | - | chr3_2:85064598-85064617 | Msa0432830:intron | 35.0% | |
TTGCTCCTTCAATACAACAT+AGG | + | chr3_2:85064606-85064625 | None:intergenic | 35.0% | |
GGGGTAAAAAAAAACTGTAG+TGG | - | chr3_2:85065019-85065038 | Msa0432830:CDS | 35.0% | |
TTCACAGTTGAAGTGATTGA+TGG | + | chr3_2:85065045-85065064 | None:intergenic | 35.0% | |
CAACTGATGATCAACACTTT+CGG | + | chr3_2:85065152-85065171 | None:intergenic | 35.0% | |
TCAAGTCTAACAGTAACACT+CGG | + | chr3_2:85065178-85065197 | None:intergenic | 35.0% | |
ACAATTTAACTGATCCTCAC+TGG | + | chr3_2:85065254-85065273 | None:intergenic | 35.0% | |
! | TCCTAAATTCTGACTTGAGT+TGG | - | chr3_2:85065278-85065297 | Msa0432830:CDS | 35.0% |
ATGGATCAATCAATGCCTTT+GGG | - | chr3_2:85065305-85065324 | Msa0432830:CDS | 35.0% | |
! | TGGTTTTTGATAAAGCCCAA+AGG | + | chr3_2:85065323-85065342 | None:intergenic | 35.0% |
TCTTCACATGTCATAACAGA+AGG | - | chr3_2:85065475-85065494 | Msa0432830:intron | 35.0% | |
TATGCAGGCAGATGTTATAA+TGG | - | chr3_2:85065560-85065579 | Msa0432830:CDS | 35.0% | |
!! | ATGTTATAATGGCTTTGGCT+GGG | - | chr3_2:85065571-85065590 | Msa0432830:CDS | 35.0% |
! | CATAGTGGAGAAAATGAAAC+AGG | - | chr3_2:85065666-85065685 | Msa0432830:intron | 35.0% |
CAAACTATGTAGTATGCTTG+AGG | + | chr3_2:85065804-85065823 | None:intergenic | 35.0% | |
TTCAATCACTGCCAATTTGA+AGG | + | chr3_2:85065863-85065882 | None:intergenic | 35.0% | |
! | ATACTGCAGGCGATATTTTT+GGG | + | chr3_2:85065905-85065924 | None:intergenic | 35.0% |
GTTGTCCGATCTCATATTAA+CGG | + | chr3_2:85065960-85065979 | None:intergenic | 35.0% | |
AAGGATGACACAAAAAGGAT+CGG | + | chr3_2:85066062-85066081 | None:intergenic | 35.0% | |
AGGCATGTAAGGTAAAGAAA+AGG | + | chr3_2:85066081-85066100 | None:intergenic | 35.0% | |
TTTAGAAAGCAAGGCATGTA+AGG | + | chr3_2:85066092-85066111 | None:intergenic | 35.0% | |
!! | GAAAATATTCGAGTTGGTTC+GGG | + | chr3_2:85066155-85066174 | None:intergenic | 35.0% |
TAAAGATACTAGAAATCCGG+CGG | - | chr3_2:85066301-85066320 | Msa0432830:CDS | 35.0% | |
CAGAAATAAGAGAAAGCTCT+TGG | + | chr3_2:85066419-85066438 | None:intergenic | 35.0% | |
ATTATGTGGGAAACAAGAGT+AGG | - | chr3_2:85066508-85066527 | Msa0432830:five_prime_UTR | 35.0% | |
AAGAGTAGGATGATTGTGTA+AGG | - | chr3_2:85066522-85066541 | Msa0432830:five_prime_UTR | 35.0% | |
! | GTTGTGGAGTTTTCTGTTGT+TGG | + | chr3_2:85061878-85061897 | None:intergenic | 40.0% |
GTGAAATGGGTAATCAATGG+CGG | - | chr3_2:85062018-85062037 | Msa0432830:three_prime_UTR | 40.0% | |
CACAACAACAACAACATCAG+TGG | - | chr3_2:85062076-85062095 | Msa0432830:three_prime_UTR | 40.0% | |
! | GAAAATCATGGAGGAAGTGT+TGG | + | chr3_2:85062105-85062124 | None:intergenic | 40.0% |
! | CACTTCCTCCATGATTTTCT+CGG | - | chr3_2:85062106-85062125 | Msa0432830:exon | 40.0% |
CCCACTGAGAGAAGAAAAAA+TGG | + | chr3_2:85062345-85062364 | None:intergenic | 40.0% | |
CCATAAATTTGCATACCAGG+GGG | + | chr3_2:85062450-85062469 | None:intergenic | 40.0% | |
GTGCCAGAAAAATCACTTCT+TGG | + | chr3_2:85062857-85062876 | None:intergenic | 40.0% | |
!!! | CTCAAGTCCTGTTTTTGTAC+AGG | - | chr3_2:85063093-85063112 | Msa0432830:intron | 40.0% |
AGTAACACTTCGTCGTCATT+AGG | + | chr3_2:85063157-85063176 | None:intergenic | 40.0% | |
! | AATGACGACGAAGTGTTACT+TGG | - | chr3_2:85063157-85063176 | Msa0432830:intron | 40.0% |
CGATCTATTCTCATGAATGC+TGG | - | chr3_2:85063262-85063281 | Msa0432830:intron | 40.0% | |
! | GAAGTTAGTTGGTGTGCAAA+AGG | + | chr3_2:85063328-85063347 | None:intergenic | 40.0% |
CAGGCTGAGAGATAAATGAA+GGG | + | chr3_2:85063378-85063397 | None:intergenic | 40.0% | |
!! | AGTTCTAGATCCTTCATCAG+CGG | + | chr3_2:85063401-85063420 | None:intergenic | 40.0% |
! | GGATCTAGAACTGGAATCAA+AGG | - | chr3_2:85063409-85063428 | Msa0432830:intron | 40.0% |
!! | ATTTCATCTGTGGTGTTGCT+CGG | - | chr3_2:85063475-85063494 | Msa0432830:intron | 40.0% |
! | TCTCCTTTTGCCAACGTAAA+GGG | + | chr3_2:85063613-85063632 | None:intergenic | 40.0% |
! | TTCTCCTTTTGCCAACGTAA+AGG | + | chr3_2:85063614-85063633 | None:intergenic | 40.0% |
CATTGAACAGCAGTCAACAT+GGG | - | chr3_2:85063658-85063677 | Msa0432830:intron | 40.0% | |
! | CGCCAGATGACTATCTTTTA+TGG | - | chr3_2:85063696-85063715 | Msa0432830:intron | 40.0% |
! | TGATGATGTCCACCAACATA+AGG | - | chr3_2:85063737-85063756 | Msa0432830:intron | 40.0% |
! | GTTCATCCGTGGTTGATTTA+AGG | - | chr3_2:85063861-85063880 | Msa0432830:intron | 40.0% |
ATCAGGTTTCAGCCGAAATA+TGG | - | chr3_2:85063918-85063937 | Msa0432830:intron | 40.0% | |
!! | TGCTGTTTCTACAGCCTATT+TGG | - | chr3_2:85063980-85063999 | Msa0432830:intron | 40.0% |
!! | GCTGTTTCTACAGCCTATTT+GGG | - | chr3_2:85063981-85064000 | Msa0432830:intron | 40.0% |
TGTGCAATGACTACCCAAAT+AGG | + | chr3_2:85063997-85064016 | None:intergenic | 40.0% | |
TGGGTAGTCATTGCACAATA+TGG | - | chr3_2:85064000-85064019 | Msa0432830:intron | 40.0% | |
GTAGTCATTGCACAATATGG+TGG | - | chr3_2:85064003-85064022 | Msa0432830:intron | 40.0% | |
TATGTTTCCCCGCTGAAATT+TGG | - | chr3_2:85064301-85064320 | Msa0432830:intron | 40.0% | |
CTTAGCATCAGCAATGTGTT+TGG | + | chr3_2:85064363-85064382 | None:intergenic | 40.0% | |
CCTGCTTGGTTAAGATTTCA+GGG | + | chr3_2:85064684-85064703 | None:intergenic | 40.0% | |
CCTGAAATCTTAACCAAGCA+GGG | - | chr3_2:85064682-85064701 | Msa0432830:intron | 40.0% | |
GCTGAATGAGAATCAAAGAG+GGG | + | chr3_2:85064893-85064912 | None:intergenic | 40.0% | |
GGCTGAATGAGAATCAAAGA+GGG | + | chr3_2:85064894-85064913 | None:intergenic | 40.0% | |
ACATGTATACCCAAGACAGT+AGG | - | chr3_2:85064969-85064988 | Msa0432830:CDS | 40.0% | |
CATGTATACCCAAGACAGTA+GGG | - | chr3_2:85064970-85064989 | Msa0432830:CDS | 40.0% | |
GCCAACTCAAGTCAGAATTT+AGG | + | chr3_2:85065282-85065301 | None:intergenic | 40.0% | |
CATGGATCAATCAATGCCTT+TGG | - | chr3_2:85065304-85065323 | Msa0432830:CDS | 40.0% | |
! | AAGAGACGCATAGTTTGTCT+TGG | - | chr3_2:85065444-85065463 | Msa0432830:intron | 40.0% |
! | AGAGACGCATAGTTTGTCTT+GGG | - | chr3_2:85065445-85065464 | Msa0432830:intron | 40.0% |
GGCAGATGTTATAATGGCTT+TGG | - | chr3_2:85065566-85065585 | Msa0432830:CDS | 40.0% | |
!! | GATGTTATAATGGCTTTGGC+TGG | - | chr3_2:85065570-85065589 | Msa0432830:CDS | 40.0% |
ACCAGCTTTGCAGTAGATTT+CGG | + | chr3_2:85065630-85065649 | None:intergenic | 40.0% | |
! | AACAGGGTTAGTGAGTAATG+TGG | - | chr3_2:85065683-85065702 | Msa0432830:intron | 40.0% |
GTAGTATGCTTGAGGATTAC+CGG | + | chr3_2:85065796-85065815 | None:intergenic | 40.0% | |
!! | TACTGCAGGCGATATTTTTG+GGG | + | chr3_2:85065904-85065923 | None:intergenic | 40.0% |
! | GATACTGCAGGCGATATTTT+TGG | + | chr3_2:85065906-85065925 | None:intergenic | 40.0% |
TTTACTGCGTCAAACTGTGT+GGG | + | chr3_2:85065928-85065947 | None:intergenic | 40.0% | |
TTTGACGCAGTAAACGATCT+CGG | - | chr3_2:85065934-85065953 | Msa0432830:intron | 40.0% | |
ACAAAAAGGATCGGTGGAAT+TGG | + | chr3_2:85066053-85066072 | None:intergenic | 40.0% | |
AGCTATGCAGCAGAGTGAAA+TGG | - | chr3_2:85062004-85062023 | Msa0432830:three_prime_UTR | 45.0% | |
GCTATGCAGCAGAGTGAAAT+GGG | - | chr3_2:85062005-85062024 | Msa0432830:three_prime_UTR | 45.0% | |
TCATGCCGAGAAAATCATGG+AGG | + | chr3_2:85062114-85062133 | None:intergenic | 45.0% | |
GCTTCATGCCGAGAAAATCA+TGG | + | chr3_2:85062117-85062136 | None:intergenic | 45.0% | |
GTGCTTACCAGAAACGGTTT+CGG | + | chr3_2:85062227-85062246 | None:intergenic | 45.0% | |
CCCCCTGGTATGCAAATTTA+TGG | - | chr3_2:85062447-85062466 | Msa0432830:intron | 45.0% | |
!! | CAGGTATCGAATCATCTCGA+GGG | - | chr3_2:85062815-85062834 | Msa0432830:CDS | 45.0% |
TCACTTCTTGGGCCATAGAA+TGG | + | chr3_2:85062845-85062864 | None:intergenic | 45.0% | |
! | GGCCCAAGAAGTGATTTTTC+TGG | - | chr3_2:85062851-85062870 | Msa0432830:CDS | 45.0% |
TCTGGAGGAACCCATAAATG+AGG | + | chr3_2:85062927-85062946 | None:intergenic | 45.0% | |
!! | CATTTGAAAGGCATCTCTGG+AGG | + | chr3_2:85062942-85062961 | None:intergenic | 45.0% |
CTCCAGAGATGCCTTTCAAA+TGG | - | chr3_2:85062940-85062959 | Msa0432830:intron | 45.0% | |
!! | GACCATTTGAAAGGCATCTC+TGG | + | chr3_2:85062945-85062964 | None:intergenic | 45.0% |
GGAATCAGGGACCATTTGAA+AGG | + | chr3_2:85062954-85062973 | None:intergenic | 45.0% | |
!! | GCATCAATCTTAGTGTTGGC+GGG | + | chr3_2:85063229-85063248 | None:intergenic | 45.0% |
! | CGCATCAATCTTAGTGTTGG+CGG | + | chr3_2:85063230-85063249 | None:intergenic | 45.0% |
AAGCTTAGGGATACCATTGC+CGG | - | chr3_2:85063352-85063371 | Msa0432830:intron | 45.0% | |
CTGAGAGATAAATGAAGGGC+CGG | + | chr3_2:85063374-85063393 | None:intergenic | 45.0% | |
GCAGGCTGAGAGATAAATGA+AGG | + | chr3_2:85063379-85063398 | None:intergenic | 45.0% | |
! | GCTGATGAAGGATCTAGAAC+TGG | - | chr3_2:85063400-85063419 | Msa0432830:intron | 45.0% |
ATCAGTAGCAGCGGTGTTTA+TGG | + | chr3_2:85063452-85063471 | None:intergenic | 45.0% | |
ACTCCCTTTACGTTGGCAAA+AGG | - | chr3_2:85063607-85063626 | Msa0432830:intron | 45.0% | |
GCATTGAACAGCAGTCAACA+TGG | - | chr3_2:85063657-85063676 | Msa0432830:intron | 45.0% | |
TACGAGGTCAGACCTTATGT+TGG | + | chr3_2:85063752-85063771 | None:intergenic | 45.0% | |
!! | TGCTTAAGCTTTGGGTACAC+TGG | - | chr3_2:85064084-85064103 | Msa0432830:intron | 45.0% |
!! | TTAAGCTTTGGGTACACTGG+CGG | - | chr3_2:85064087-85064106 | Msa0432830:intron | 45.0% |
TCGTGTTCGATGCAAAATGC+TGG | + | chr3_2:85064452-85064471 | None:intergenic | 45.0% | |
TGTTAGACATGCACTCAGAG+TGG | - | chr3_2:85064535-85064554 | Msa0432830:intron | 45.0% | |
CGAACAGACAGCTAATCAAC+TGG | + | chr3_2:85064561-85064580 | None:intergenic | 45.0% | |
CTATGCACTCTCAACGAAAG+GGG | + | chr3_2:85064634-85064653 | None:intergenic | 45.0% | |
CCTATGCACTCTCAACGAAA+GGG | + | chr3_2:85064635-85064654 | None:intergenic | 45.0% | |
TCCTATGCACTCTCAACGAA+AGG | + | chr3_2:85064636-85064655 | None:intergenic | 45.0% | |
CCCTGAAATCTTAACCAAGC+AGG | - | chr3_2:85064681-85064700 | Msa0432830:intron | 45.0% | |
CCCTGCTTGGTTAAGATTTC+AGG | + | chr3_2:85064685-85064704 | None:intergenic | 45.0% | |
AGAATCAAAGAGGGGTCTCA+GGG | + | chr3_2:85064885-85064904 | None:intergenic | 45.0% | |
GGGCTGAATGAGAATCAAAG+AGG | + | chr3_2:85064895-85064914 | None:intergenic | 45.0% | |
CAACACATCTCGCATTTCGA+AGG | + | chr3_2:85065109-85065128 | None:intergenic | 45.0% | |
!! | TCTGACTTGAGTTGGCTACA+TGG | - | chr3_2:85065286-85065305 | Msa0432830:CDS | 45.0% |
ACCGAAATCTACTGCAAAGC+TGG | - | chr3_2:85065626-85065645 | Msa0432830:CDS | 45.0% | |
CATTCCCACAAGAGCTTCAT+GGG | - | chr3_2:85065706-85065725 | Msa0432830:intron | 45.0% | |
ACTTCCCATGAAGCTCTTGT+GGG | + | chr3_2:85065713-85065732 | None:intergenic | 45.0% | |
AACTTCCCATGAAGCTCTTG+TGG | + | chr3_2:85065714-85065733 | None:intergenic | 45.0% | |
! | TACCGGTTGGAGTAGATACA+CGG | + | chr3_2:85065779-85065798 | None:intergenic | 45.0% |
TATGCTTGAGGATTACCGGT+TGG | + | chr3_2:85065792-85065811 | None:intergenic | 45.0% | |
GTTTACTGCGTCAAACTGTG+TGG | + | chr3_2:85065929-85065948 | None:intergenic | 45.0% | |
CTCGGCCGTTAATATGAGAT+CGG | - | chr3_2:85065952-85065971 | Msa0432830:intron | 45.0% | |
GATGACACAAAAAGGATCGG+TGG | + | chr3_2:85066059-85066078 | None:intergenic | 45.0% | |
! | GCTCTTTTGTCTTCGGAACT+GGG | + | chr3_2:85066341-85066360 | None:intergenic | 45.0% |
! | TCACTGCGCTCTTTTGTCTT+CGG | + | chr3_2:85066348-85066367 | None:intergenic | 45.0% |
TCTAAACCAGTCACCGTATC+AGG | - | chr3_2:85066608-85066627 | Msa0432830:five_prime_UTR | 45.0% | |
AGAAGCTGCTTGACCTGATA+CGG | + | chr3_2:85066624-85066643 | None:intergenic | 45.0% | |
!! | AAAAAAAAAAAAAAAATTGA+GGG | + | chr3_2:85062380-85062399 | None:intergenic | 5.0% |
AGAGAGAGAGAGAGAGAGAG+AGG | + | chr3_2:85061964-85061983 | None:intergenic | 50.0% | |
! | ATCAATGGCGGTGCTGAGAA+TGG | - | chr3_2:85062030-85062049 | Msa0432830:three_prime_UTR | 50.0% |
!! | ACGTCGGTGGAAGTATCAGT+GGG | + | chr3_2:85062139-85062158 | None:intergenic | 50.0% |
!! | AACGTCGGTGGAAGTATCAG+TGG | + | chr3_2:85062140-85062159 | None:intergenic | 50.0% |
CTGATACTTCCACCGACGTT+AGG | - | chr3_2:85062140-85062159 | Msa0432830:CDS | 50.0% | |
TTCCACCGACGTTAGGTTAC+CGG | - | chr3_2:85062147-85062166 | Msa0432830:CDS | 50.0% | |
TTTCGGAGGTGGAGGAGAAA+GGG | + | chr3_2:85062210-85062229 | None:intergenic | 50.0% | |
CTTACCAGAAACGGTTTCGG+AGG | + | chr3_2:85062224-85062243 | None:intergenic | 50.0% | |
! | TGGAGTTGATTGTTTCCCCC+TGG | - | chr3_2:85062432-85062451 | Msa0432830:intron | 50.0% |
!! | GCAGGTATCGAATCATCTCG+AGG | - | chr3_2:85062814-85062833 | Msa0432830:CDS | 50.0% |
CTCGAGGGAGTTCCATTCTA+TGG | - | chr3_2:85062830-85062849 | Msa0432830:CDS | 50.0% | |
CGGAGGACCTGTACAAAAAC+AGG | + | chr3_2:85063103-85063122 | None:intergenic | 50.0% | |
TCTCTCCTCCAGACGCATTT+CGG | + | chr3_2:85063123-85063142 | None:intergenic | 50.0% | |
CTGGAGGAGAGAGATCTAGA+AGG | - | chr3_2:85063131-85063150 | Msa0432830:intron | 50.0% | |
!! | TCAATCTTAGTGTTGGCGGG+AGG | + | chr3_2:85063226-85063245 | None:intergenic | 50.0% |
GATAAATGAAGGGCCGGCAA+TGG | + | chr3_2:85063368-85063387 | None:intergenic | 50.0% | |
AGAACTGGAATCAAAGGCCC+CGG | - | chr3_2:85063415-85063434 | Msa0432830:intron | 50.0% | |
ATAGATTTACCTTGGGGGCG+TGG | + | chr3_2:85063542-85063561 | None:intergenic | 50.0% | |
AAAGATAGTCATCTGGCGGC+TGG | + | chr3_2:85063694-85063713 | None:intergenic | 50.0% | |
GAGGTCAGACCTTATGTTGG+TGG | + | chr3_2:85063749-85063768 | None:intergenic | 50.0% | |
! | CCCTTTCGTTGAGAGTGCAT+AGG | - | chr3_2:85064632-85064651 | Msa0432830:intron | 50.0% |
GAGAATCAAAGAGGGGTCTC+AGG | + | chr3_2:85064886-85064905 | None:intergenic | 50.0% | |
CATGACAATTGCACGCGCTT+TGG | - | chr3_2:85065535-85065554 | Msa0432830:CDS | 50.0% | |
!! | ATGGCTTTGGCTGGGTCAAA+TGG | - | chr3_2:85065579-85065598 | Msa0432830:CDS | 50.0% |
!! | CTGGGTCAAATGGTGGATCT+TGG | - | chr3_2:85065589-85065608 | Msa0432830:CDS | 50.0% |
GCATTCCCACAAGAGCTTCA+TGG | - | chr3_2:85065705-85065724 | Msa0432830:intron | 50.0% | |
CATGGGAAGTTGTCTGCTAC+TGG | - | chr3_2:85065723-85065742 | Msa0432830:intron | 50.0% | |
TACACGGTCAACAGGTCCAA+CGG | + | chr3_2:85065763-85065782 | None:intergenic | 50.0% | |
GGAGTAGATACACGGTCAAC+AGG | + | chr3_2:85065771-85065790 | None:intergenic | 50.0% | |
GACCGTGTATCTACTCCAAC+CGG | - | chr3_2:85065774-85065793 | Msa0432830:intron | 50.0% | |
CAAACTGTGTGGGATACTGC+AGG | + | chr3_2:85065918-85065937 | None:intergenic | 50.0% | |
!! | TTGGTTCGGGCAAGGTCTAA+AGG | + | chr3_2:85066142-85066161 | None:intergenic | 50.0% |
!! | TATTCGAGTTGGTTCGGGCA+AGG | + | chr3_2:85066150-85066169 | None:intergenic | 50.0% |
CCTTGATGTACCCCTACAAC+CGG | + | chr3_2:85066269-85066288 | None:intergenic | 50.0% | |
! | CGCTCTTTTGTCTTCGGAAC+TGG | + | chr3_2:85066342-85066361 | None:intergenic | 50.0% |
TGCCTCCGGTAACCTAACGT+CGG | + | chr3_2:85062155-85062174 | None:intergenic | 55.0% | |
GTTTCGGAGGTGGAGGAGAA+AGG | + | chr3_2:85062211-85062230 | None:intergenic | 55.0% | |
AGAAACGGTTTCGGAGGTGG+AGG | + | chr3_2:85062218-85062237 | None:intergenic | 55.0% | |
TCCACCTCCGAAACCGTTTC+TGG | - | chr3_2:85062217-85062236 | Msa0432830:intron | 55.0% | |
ACCAGAAACGGTTTCGGAGG+TGG | + | chr3_2:85062221-85062240 | None:intergenic | 55.0% | |
CTAGATCCTTCATCAGCGGC+AGG | + | chr3_2:85063397-85063416 | None:intergenic | 55.0% | |
!! | TCATCTGTGGTGTTGCTCGG+TGG | - | chr3_2:85063478-85063497 | Msa0432830:intron | 55.0% |
TAGAATCATCCACGCCCCCA+AGG | - | chr3_2:85063530-85063549 | Msa0432830:intron | 55.0% | |
TTCGGTCTGCAGTTCATCCG+TGG | - | chr3_2:85063850-85063869 | Msa0432830:intron | 55.0% | |
GCTTGAGTCAAGACCCTGCT+TGG | + | chr3_2:85064698-85064717 | None:intergenic | 55.0% | |
TACCCAAGACAGTAGGGTGC+AGG | - | chr3_2:85064976-85064995 | Msa0432830:CDS | 55.0% | |
ACCCAAGACAGTAGGGTGCA+GGG | - | chr3_2:85064977-85064996 | Msa0432830:CDS | 55.0% | |
TCCCTGCACCCTACTGTCTT+GGG | + | chr3_2:85064981-85065000 | None:intergenic | 55.0% | |
TTCCCTGCACCCTACTGTCT+TGG | + | chr3_2:85064982-85065001 | None:intergenic | 55.0% | |
GCTTTGGCTGGGTCAAATGG+TGG | - | chr3_2:85065582-85065601 | Msa0432830:CDS | 55.0% | |
! | CCGGTTGTAGGGGTACATCA+AGG | - | chr3_2:85066266-85066285 | Msa0432830:CDS | 55.0% |
GCTTGACCTGATACGGTGAC+TGG | + | chr3_2:85066617-85066636 | None:intergenic | 55.0% | |
CTCCGGTAACCTAACGTCGG+TGG | + | chr3_2:85062152-85062171 | None:intergenic | 60.0% | |
CACCGACGTTAGGTTACCGG+AGG | - | chr3_2:85062150-85062169 | Msa0432830:CDS | 60.0% | |
GAGGCTGATGCTGATGCCTC+CGG | + | chr3_2:85062169-85062188 | None:intergenic | 60.0% | |
CAGGTCCTCCGAAATGCGTC+TGG | - | chr3_2:85063112-85063131 | Msa0432830:intron | 60.0% | |
GTCCTCCGAAATGCGTCTGG+AGG | - | chr3_2:85063115-85063134 | Msa0432830:intron | 60.0% | |
CTCCTCCAGACGCATTTCGG+AGG | + | chr3_2:85063120-85063139 | None:intergenic | 60.0% | |
GCGGAGGATGCTGCATGGAA+GGG | + | chr3_2:85063288-85063307 | None:intergenic | 60.0% | |
GGAGTCAACTGTCCTCCACG+CGG | + | chr3_2:85063307-85063326 | None:intergenic | 60.0% | |
TCTCAGCCTGCCGCTGATGA+AGG | - | chr3_2:85063388-85063407 | Msa0432830:intron | 60.0% | |
ATAGTCATCTGGCGGCTGGC+AGG | + | chr3_2:85063690-85063709 | None:intergenic | 60.0% | |
TCAAAGAGGGGTCTCAGGGC+AGG | + | chr3_2:85064881-85064900 | None:intergenic | 60.0% | |
GGTCAACAGGTCCAACGGCA+CGG | + | chr3_2:85065758-85065777 | None:intergenic | 60.0% | |
! | GGATCTGCTGCTTGAACCGC+CGG | + | chr3_2:85066320-85066339 | None:intergenic | 60.0% |
TCAGCATCAGCCTCCTCCGC+CGG | - | chr3_2:85062175-85062194 | Msa0432830:CDS | 65.0% | |
GGAGAAAGGGCCACGAGCAC+CGG | + | chr3_2:85062197-85062216 | None:intergenic | 65.0% | |
CGCGGAGGATGCTGCATGGA+AGG | + | chr3_2:85063289-85063308 | None:intergenic | 65.0% | |
TCCATGCAGCATCCTCCGCG+TGG | - | chr3_2:85063289-85063308 | Msa0432830:intron | 65.0% | |
TCCACGCGGAGGATGCTGCA+TGG | + | chr3_2:85063293-85063312 | None:intergenic | 65.0% | |
ATGCAGCATCCTCCGCGTGG+AGG | - | chr3_2:85063292-85063311 | Msa0432830:intron | 65.0% | |
GTCAACTGTCCTCCACGCGG+AGG | + | chr3_2:85063304-85063323 | None:intergenic | 65.0% | |
ATCTGGCGGCTGGCAGGTGT+TGG | + | chr3_2:85063684-85063703 | None:intergenic | 65.0% | |
GCACGCGCTTTGGCGTATGC+AGG | - | chr3_2:85065545-85065564 | Msa0432830:CDS | 65.0% | |
! | GGCAGTTCTAGCCGTGCCGT+TGG | - | chr3_2:85065744-85065763 | Msa0432830:intron | 65.0% |
!! | GAAAGGGCCACGAGCACCGG+CGG | + | chr3_2:85062194-85062213 | None:intergenic | 70.0% |
! | GCCTCCTCCGCCGGTGCTCG+TGG | - | chr3_2:85062184-85062203 | Msa0432830:CDS | 80.0% |
!!! | GCCACGAGCACCGGCGGAGG+AGG | + | chr3_2:85062188-85062207 | None:intergenic | 80.0% |
!!! | AGGGCCACGAGCACCGGCGG+AGG | + | chr3_2:85062191-85062210 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 85061733 | 85066749 | 85061733 | ID=Msa0432830;Name=Msa0432830 |
chr3_2 | mRNA | 85061733 | 85066749 | 85061733 | ID=Msa0432830-mRNA-1;Parent=Msa0432830;Name=Msa0432830-mRNA-1;_AED=0.21;_eAED=0.21;_QI=301|1|1|1|1|1|6|382|413 |
chr3_2 | exon | 85061733 | 85062206 | 85061733 | ID=Msa0432830-mRNA-1:exon:24211;Parent=Msa0432830-mRNA-1 |
chr3_2 | exon | 85062687 | 85062915 | 85062687 | ID=Msa0432830-mRNA-1:exon:24210;Parent=Msa0432830-mRNA-1 |
chr3_2 | exon | 85064724 | 85064814 | 85064724 | ID=Msa0432830-mRNA-1:exon:24209;Parent=Msa0432830-mRNA-1 |
chr3_2 | exon | 85064931 | 85065367 | 85064931 | ID=Msa0432830-mRNA-1:exon:24208;Parent=Msa0432830-mRNA-1 |
chr3_2 | exon | 85065485 | 85065672 | 85065485 | ID=Msa0432830-mRNA-1:exon:24207;Parent=Msa0432830-mRNA-1 |
chr3_2 | exon | 85066244 | 85066749 | 85066244 | ID=Msa0432830-mRNA-1:exon:24206;Parent=Msa0432830-mRNA-1 |
chr3_2 | five_prime_UTR | 85066449 | 85066749 | 85066449 | ID=Msa0432830-mRNA-1:five_prime_utr;Parent=Msa0432830-mRNA-1 |
chr3_2 | CDS | 85066244 | 85066448 | 85066244 | ID=Msa0432830-mRNA-1:cds;Parent=Msa0432830-mRNA-1 |
chr3_2 | CDS | 85065485 | 85065672 | 85065485 | ID=Msa0432830-mRNA-1:cds;Parent=Msa0432830-mRNA-1 |
chr3_2 | CDS | 85064931 | 85065367 | 85064931 | ID=Msa0432830-mRNA-1:cds;Parent=Msa0432830-mRNA-1 |
chr3_2 | CDS | 85064724 | 85064814 | 85064724 | ID=Msa0432830-mRNA-1:cds;Parent=Msa0432830-mRNA-1 |
chr3_2 | CDS | 85062687 | 85062915 | 85062687 | ID=Msa0432830-mRNA-1:cds;Parent=Msa0432830-mRNA-1 |
chr3_2 | CDS | 85062115 | 85062206 | 85062115 | ID=Msa0432830-mRNA-1:cds;Parent=Msa0432830-mRNA-1 |
chr3_2 | three_prime_UTR | 85061733 | 85062114 | 85061733 | ID=Msa0432830-mRNA-1:three_prime_utr;Parent=Msa0432830-mRNA-1 |
Gene Sequence |
Protein sequence |