Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450170 | sp|Q84MB2|TIF8_ARATH | 39.409 | 406 | 150 | 15 | 26 | 408 | 27 | 359 | 2.63e-50 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450170 | G7JBP9 | 95.913 | 416 | 14 | 2 | 1 | 413 | 1 | 416 | 0.0 | 800 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1450170 | TF | Tify |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0432830 | Msa1450170 | 0.993169 | 6.548226e-198 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450170 | MtrunA17_Chr3g0138401 | 95.913 | 416 | 14 | 2 | 1 | 413 | 1 | 416 | 0.0 | 800 |
| Msa1450170 | MtrunA17_Chr4g0005121 | 91.429 | 70 | 5 | 1 | 1 | 70 | 1 | 69 | 5.44e-30 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450170 | AT4G32570.1 | 39.409 | 406 | 150 | 15 | 26 | 408 | 27 | 359 | 2.67e-51 | 176 |
| Msa1450170 | AT4G32570.2 | 40.717 | 307 | 97 | 9 | 26 | 315 | 27 | 265 | 9.30e-50 | 172 |
Find 148 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTCTGATTCCTCATTTA+TGG | 0.101310 | tig0032806:-18264 | Msa1450170:CDS |
| CTAAGATTGATGCGAATAAA+TGG | 0.197424 | tig0032806:-17941 | Msa1450170:CDS |
| TCTTATTTCTGATTATTTAT+TGG | 0.205262 | tig0032806:-14749 | Msa1450170:three_prime_UTR |
| ATCAGTAGCAGCGGTGTTTA+TGG | 0.205391 | tig0032806:+17728 | None:intergenic |
| CTTATTTCTGATTATTTATT+GGG | 0.217535 | tig0032806:-14748 | Msa1450170:three_prime_UTR |
| TCCACCTCCGAAACCGTTTC+TGG | 0.230412 | tig0032806:-18960 | Msa1450170:intron |
| ATTATATTAGTTAGAGGTTT+TGG | 0.247280 | tig0032806:+17669 | None:intergenic |
| AATTCTGATTCCTCATTTAT+GGG | 0.297898 | tig0032806:-18263 | Msa1450170:CDS |
| GTTTATGGAACTTAAAATTC+CGG | 0.306770 | tig0032806:+17743 | None:intergenic |
| TGTAATCAATTCAATTCAAT+TGG | 0.308257 | tig0032806:+19416 | None:intergenic |
| TCTAAACCAGTCACCGTATC+AGG | 0.314944 | tig0032806:-14569 | Msa1450170:three_prime_UTR |
| ACCAGCTTTGCAGTAGATTT+CGG | 0.332699 | tig0032806:+15550 | None:intergenic |
| CATAGTGGAGAAAATGAAAC+AGG | 0.343306 | tig0032806:-15511 | Msa1450170:CDS |
| GATTCTATTATATTAGTTAG+AGG | 0.379814 | tig0032806:+17663 | None:intergenic |
| GACCATTTGAAAGGCATCTC+TGG | 0.380703 | tig0032806:+18235 | None:intergenic |
| TCTCTCCTCCAGACGCATTT+CGG | 0.381595 | tig0032806:+18057 | None:intergenic |
| GATGTTATAATGGCTTTGGC+TGG | 0.382975 | tig0032806:-15607 | Msa1450170:CDS |
| CAGAAATAAGAGAAAGCTCT+TGG | 0.383667 | tig0032806:+14761 | None:intergenic |
| TTCCACCGACGTTAGGTTAC+CGG | 0.385652 | tig0032806:-19030 | Msa1450170:CDS |
| TTTATGGAACTTAAAATTCC+GGG | 0.391734 | tig0032806:+17744 | None:intergenic |
| CTCGAGGGAGTTCCATTCTA+TGG | 0.400380 | tig0032806:-18347 | Msa1450170:CDS |
| AACTAACTTCAAACAAGCTT+AGG | 0.400478 | tig0032806:-17839 | Msa1450170:CDS |
| TGCTAAAGATACTAGAAATC+CGG | 0.405348 | tig0032806:-14879 | Msa1450170:CDS |
| GGAGAAAGGGCCACGAGCAC+CGG | 0.406027 | tig0032806:+18983 | None:intergenic |
| GTAATCAATTCAATTCAATT+GGG | 0.412543 | tig0032806:+19417 | None:intergenic |
| TAAGCTTGTTTGAAGTTAGT+TGG | 0.412879 | tig0032806:+17841 | None:intergenic |
| CATGGGAAGTTGTCTGCTAC+TGG | 0.416162 | tig0032806:-15454 | Msa1450170:CDS |
| GCCACGAGCACCGGCGGAGG+AGG | 0.420220 | tig0032806:+18992 | None:intergenic |
| GTGCTTACCAGAAACGGTTT+CGG | 0.424015 | tig0032806:+18953 | None:intergenic |
| CGCGGAGGATGCTGCATGGA+AGG | 0.427118 | tig0032806:+17891 | None:intergenic |
| AGCTATGCAGCAGAGTGAAA+TGG | 0.429562 | tig0032806:-19173 | Msa1450170:five_prime_UTR |
| ATCTGGCGGCTGGCAGGTGT+TGG | 0.436258 | tig0032806:+17496 | None:intergenic |
| CTGGGTCAAATGGTGGATCT+TGG | 0.437897 | tig0032806:-15588 | Msa1450170:CDS |
| GGCAGATGTTATAATGGCTT+TGG | 0.438099 | tig0032806:-15611 | Msa1450170:CDS |
| TGATGATGTCCACCAACATA+AGG | 0.439728 | tig0032806:-17440 | Msa1450170:intron |
| GAAGTTAGTTGGTGTGCAAA+AGG | 0.439875 | tig0032806:+17852 | None:intergenic |
| CAGGTCCTCCGAAATGCGTC+TGG | 0.445569 | tig0032806:-18065 | Msa1450170:CDS |
| TCACTTCTTGGGCCATAGAA+TGG | 0.448253 | tig0032806:+18335 | None:intergenic |
| CGCATCAATCTTAGTGTTGG+CGG | 0.457246 | tig0032806:+17950 | None:intergenic |
| TCAAAACTCACATTTGATGA+AGG | 0.458213 | tig0032806:-18201 | Msa1450170:intron |
| GGAGTAGATACACGGTCAAC+AGG | 0.460556 | tig0032806:+15409 | None:intergenic |
| ATAGTCATCTGGCGGCTGGC+AGG | 0.466446 | tig0032806:+17490 | None:intergenic |
| TATCAATTTGGTAGAAAAGC+AGG | 0.466579 | tig0032806:-18381 | Msa1450170:intron |
| ACCAGAAACGGTTTCGGAGG+TGG | 0.466600 | tig0032806:+18959 | None:intergenic |
| GCATTCCCACAAGAGCTTCA+TGG | 0.467087 | tig0032806:-15472 | Msa1450170:CDS |
| ATGAGAAAATTTGACAAAAG+AGG | 0.468526 | tig0032806:+14719 | None:intergenic |
| TATGCAGGCAGATGTTATAA+TGG | 0.469314 | tig0032806:-15617 | Msa1450170:intron |
| CATTCCCACAAGAGCTTCAT+GGG | 0.469855 | tig0032806:-15471 | Msa1450170:CDS |
| CTCCAGAGATGCCTTTCAAA+TGG | 0.470651 | tig0032806:-18237 | Msa1450170:CDS |
| AAGCTTAGGGATACCATTGC+CGG | 0.471593 | tig0032806:-17825 | Msa1450170:CDS |
| TAAGATTGATGCGAATAAAT+GGG | 0.473687 | tig0032806:-17940 | Msa1450170:CDS |
| ACCGAAATCTACTGCAAAGC+TGG | 0.475875 | tig0032806:-15551 | Msa1450170:CDS |
| GTTTCGGAGGTGGAGGAGAA+AGG | 0.476240 | tig0032806:+18969 | None:intergenic |
| GACCGTGTATCTACTCCAAC+CGG | 0.477444 | tig0032806:-15403 | Msa1450170:intron |
| AGGGCCACGAGCACCGGCGG+AGG | 0.478100 | tig0032806:+18989 | None:intergenic |
| ATGGCTTTGGCTGGGTCAAA+TGG | 0.478398 | tig0032806:-15598 | Msa1450170:CDS |
| CTGATACTTCCACCGACGTT+AGG | 0.478726 | tig0032806:-19037 | Msa1450170:CDS |
| GCTATGCAGCAGAGTGAAAT+GGG | 0.481963 | tig0032806:-19172 | Msa1450170:five_prime_UTR |
| CTGGAGGAGAGAGATCTAGA+AGG | 0.484867 | tig0032806:-18046 | Msa1450170:CDS |
| GCCTCCTCCGCCGGTGCTCG+TGG | 0.487582 | tig0032806:-18993 | Msa1450170:CDS |
| ATCAATGGCGGTGCTGAGAA+TGG | 0.489429 | tig0032806:-19147 | Msa1450170:exon |
| GGATCTGCTGCTTGAACCGC+CGG | 0.490647 | tig0032806:+14860 | None:intergenic |
| TCAGCATCAGCCTCCTCCGC+CGG | 0.490900 | tig0032806:-19002 | Msa1450170:CDS |
| AGAAATAAGAGAAAGCTCTT+GGG | 0.490918 | tig0032806:+14762 | None:intergenic |
| GCTGATGAAGGATCTAGAAC+TGG | 0.491143 | tig0032806:-17777 | Msa1450170:CDS |
| AACTTCCCATGAAGCTCTTG+TGG | 0.491396 | tig0032806:+15466 | None:intergenic |
| CTCCATAAAAGATAGTCATC+TGG | 0.496051 | tig0032806:+17479 | None:intergenic |
| ACTAACTTCAAACAAGCTTA+GGG | 0.496585 | tig0032806:-17838 | Msa1450170:CDS |
| GAAAATCATGGAGGAAGTGT+TGG | 0.496873 | tig0032806:+19075 | None:intergenic |
| TTTCGGAGGTGGAGGAGAAA+GGG | 0.497327 | tig0032806:+18970 | None:intergenic |
| GAGATAAGTAACAGACTAGT+GGG | 0.497646 | tig0032806:-18299 | Msa1450170:CDS |
| ACTTCCCATGAAGCTCTTGT+GGG | 0.498210 | tig0032806:+15467 | None:intergenic |
| TTAATAGTGCTTACCAGAAA+CGG | 0.500267 | tig0032806:+18947 | None:intergenic |
| ATTCGCATCAATCTTAGTGT+TGG | 0.504337 | tig0032806:+17947 | None:intergenic |
| GCAGGCTGAGAGATAAATGA+AGG | 0.506389 | tig0032806:+17801 | None:intergenic |
| AATGACGACGAAGTGTTACT+TGG | 0.506870 | tig0032806:-18020 | Msa1450170:CDS |
| AGAAGCTGCTTGACCTGATA+CGG | 0.507457 | tig0032806:+14556 | None:intergenic |
| AGTAACACTTCGTCGTCATT+AGG | 0.511001 | tig0032806:+18023 | None:intergenic |
| GAAAGGGCCACGAGCACCGG+CGG | 0.511791 | tig0032806:+18986 | None:intergenic |
| AAAATCATGGAGGAAGTGTT+GGG | 0.513221 | tig0032806:+19076 | None:intergenic |
| GGATCTAGAACTGGAATCAA+AGG | 0.514477 | tig0032806:-17768 | Msa1450170:CDS |
| GAGGCTGATGCTGATGCCTC+CGG | 0.517085 | tig0032806:+19011 | None:intergenic |
| TCTCAGCCTGCCGCTGATGA+AGG | 0.519106 | tig0032806:-17789 | Msa1450170:CDS |
| GCATCAATCTTAGTGTTGGC+GGG | 0.522950 | tig0032806:+17951 | None:intergenic |
| CTAGATCCTTCATCAGCGGC+AGG | 0.525101 | tig0032806:+17783 | None:intergenic |
| CGATCTATTCTCATGAATGC+TGG | 0.527762 | tig0032806:-17915 | Msa1450170:CDS |
| AAGAGTAGGATGATTGTGTA+AGG | 0.529874 | tig0032806:-14655 | Msa1450170:three_prime_UTR |
| GCTTGACCTGATACGGTGAC+TGG | 0.533300 | tig0032806:+14563 | None:intergenic |
| GGCAGTTCTAGCCGTGCCGT+TGG | 0.541164 | tig0032806:-15433 | Msa1450170:CDS |
| ATGTTATAATGGCTTTGGCT+GGG | 0.543215 | tig0032806:-15606 | Msa1450170:CDS |
| AATATCTGAGAACTAGAAGA+TGG | 0.544323 | tig0032806:+17981 | None:intergenic |
| AAAGATAGTCATCTGGCGGC+TGG | 0.544851 | tig0032806:+17486 | None:intergenic |
| GCATTGAACAGCAGTCAACA+TGG | 0.551557 | tig0032806:-17520 | Msa1450170:intron |
| CTGAGAGATAAATGAAGGGC+CGG | 0.554107 | tig0032806:+17806 | None:intergenic |
| GCTTCATGCCGAGAAAATCA+TGG | 0.554318 | tig0032806:+19063 | None:intergenic |
| GATAAATGAAGGGCCGGCAA+TGG | 0.555598 | tig0032806:+17812 | None:intergenic |
| ATTTCATCTGTGGTGTTGCT+CGG | 0.555835 | tig0032806:-17702 | Msa1450170:CDS |
| GCGGAGGATGCTGCATGGAA+GGG | 0.560490 | tig0032806:+17892 | None:intergenic |
| ATAGTTAGAATCAGAACGAT+AGG | 0.566772 | tig0032806:-14495 | Msa1450170:three_prime_UTR |
| AGAACTGGAATCAAAGGCCC+CGG | 0.567203 | tig0032806:-17762 | Msa1450170:CDS |
| TAATCAATTCAATTCAATTG+GGG | 0.572167 | tig0032806:+19418 | None:intergenic |
| AGAGTGAAATGGGTAATCAA+TGG | 0.572299 | tig0032806:-19162 | Msa1450170:exon |
| AGAAACGGTTTCGGAGGTGG+AGG | 0.574883 | tig0032806:+18962 | None:intergenic |
| AATGATAGTAACTTGCATAG+TGG | 0.579416 | tig0032806:-15526 | Msa1450170:CDS |
| TCTGGAGGAACCCATAAATG+AGG | 0.581916 | tig0032806:+18253 | None:intergenic |
| TCCACGCGGAGGATGCTGCA+TGG | 0.586678 | tig0032806:+17887 | None:intergenic |
| GAGGTCAGACCTTATGTTGG+TGG | 0.592305 | tig0032806:+17431 | None:intergenic |
| GCTTTGGCTGGGTCAAATGG+TGG | 0.593671 | tig0032806:-15595 | Msa1450170:CDS |
| GGTCAACAGGTCCAACGGCA+CGG | 0.599017 | tig0032806:+15422 | None:intergenic |
| GGAATCAGGGACCATTTGAA+AGG | 0.601761 | tig0032806:+18226 | None:intergenic |
| TACACGGTCAACAGGTCCAA+CGG | 0.603243 | tig0032806:+15417 | None:intergenic |
| CTCCTCCAGACGCATTTCGG+AGG | 0.605747 | tig0032806:+18060 | None:intergenic |
| CCGGTTGTAGGGGTACATCA+AGG | 0.607519 | tig0032806:-14911 | Msa1450170:intron |
| AACGTCGGTGGAAGTATCAG+TGG | 0.609086 | tig0032806:+19040 | None:intergenic |
| GTCCTCCGAAATGCGTCTGG+AGG | 0.623376 | tig0032806:-18062 | Msa1450170:CDS |
| ATTATGTGGGAAACAAGAGT+AGG | 0.623513 | tig0032806:-14669 | Msa1450170:three_prime_UTR |
| TGAGATAAGTAACAGACTAG+TGG | 0.631355 | tig0032806:-18300 | Msa1450170:CDS |
| CTTACCAGAAACGGTTTCGG+AGG | 0.633124 | tig0032806:+18956 | None:intergenic |
| ATGCAGCATCCTCCGCGTGG+AGG | 0.635328 | tig0032806:-17885 | Msa1450170:CDS |
| TACTGATAAAATTTCATCTG+TGG | 0.635799 | tig0032806:-17712 | Msa1450170:CDS |
| CATTTGAAAGGCATCTCTGG+AGG | 0.646720 | tig0032806:+18238 | None:intergenic |
| CACCGACGTTAGGTTACCGG+AGG | 0.647418 | tig0032806:-19027 | Msa1450170:CDS |
| CAGGTATCGAATCATCTCGA+GGG | 0.650968 | tig0032806:-18362 | Msa1450170:CDS |
| TACGAGGTCAGACCTTATGT+TGG | 0.651133 | tig0032806:+17428 | None:intergenic |
| AGTTCTAGATCCTTCATCAG+CGG | 0.651396 | tig0032806:+17779 | None:intergenic |
| CATTGAACAGCAGTCAACAT+GGG | 0.652838 | tig0032806:-17519 | Msa1450170:intron |
| GTAAGAGGAAAAGCTGACAA+AGG | 0.654301 | tig0032806:-19442 | None:intergenic |
| CTCCGGTAACCTAACGTCGG+TGG | 0.654776 | tig0032806:+19028 | None:intergenic |
| ACGTCGGTGGAAGTATCAGT+GGG | 0.655076 | tig0032806:+19041 | None:intergenic |
| GCAGGTATCGAATCATCTCG+AGG | 0.661921 | tig0032806:-18363 | Msa1450170:CDS |
| TTATGGAACTTAAAATTCCG+GGG | 0.662736 | tig0032806:+17745 | None:intergenic |
| TCAATCTTAGTGTTGGCGGG+AGG | 0.664926 | tig0032806:+17954 | None:intergenic |
| CATAAAAGATAGTCATCTGG+CGG | 0.666315 | tig0032806:+17482 | None:intergenic |
| GTTGTTAGAAAATGTAGTTG+TGG | 0.667971 | tig0032806:+19276 | None:intergenic |
| TCCATGCAGCATCCTCCGCG+TGG | 0.673722 | tig0032806:-17888 | Msa1450170:CDS |
| CAGGCTGAGAGATAAATGAA+GGG | 0.676282 | tig0032806:+17802 | None:intergenic |
| GTCAACTGTCCTCCACGCGG+AGG | 0.679890 | tig0032806:+17876 | None:intergenic |
| TCATCTGTGGTGTTGCTCGG+TGG | 0.681028 | tig0032806:-17699 | Msa1450170:CDS |
| AACAGGGTTAGTGAGTAATG+TGG | 0.689431 | tig0032806:-15494 | Msa1450170:CDS |
| GTGAAATGGGTAATCAATGG+CGG | 0.690764 | tig0032806:-19159 | Msa1450170:exon |
| TACCGGTTGGAGTAGATACA+CGG | 0.691538 | tig0032806:+15401 | None:intergenic |
| TGCCTCCGGTAACCTAACGT+CGG | 0.705158 | tig0032806:+19025 | None:intergenic |
| ATAAGATAGATTTACCTTGG+GGG | 0.712059 | tig0032806:+17633 | None:intergenic |
| TAAAGATACTAGAAATCCGG+CGG | 0.716386 | tig0032806:-14876 | Msa1450170:CDS |
| ATAGTGGAGAAAATGAAACA+GGG | 0.722474 | tig0032806:-15510 | Msa1450170:CDS |
| AGATAAGTAACAGACTAGTG+GGG | 0.741446 | tig0032806:-18298 | Msa1450170:CDS |
| GGAGTCAACTGTCCTCCACG+CGG | 0.758189 | tig0032806:+17873 | None:intergenic |
| TCATGCCGAGAAAATCATGG+AGG | 0.774525 | tig0032806:+19066 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAATAAAAAAATTAAACAA+GGG | + | tig0032806:14998-15017 | None:intergenic | 10.0% |
| !!! | ATATAATGATATGAATTTTT+AGG | - | tig0032806:15348-15367 | Msa1450170:intron | 10.0% |
| !! | ATCTATGAATTTAAAAAATT+CGG | - | tig0032806:16541-16560 | Msa1450170:intron | 10.0% |
| !!! | CTTTTTCTATTAAATATTAT+AGG | + | tig0032806:16748-16767 | None:intergenic | 10.0% |
| !!! | AAATGATTTTAATGAAAAAT+TGG | + | tig0032806:18052-18071 | None:intergenic | 10.0% |
| !!! | ATTTTTCATTAAAATCATTT+AGG | - | tig0032806:18052-18071 | Msa1450170:CDS | 10.0% |
| !!! | TTTTTCATTAAAATCATTTA+GGG | - | tig0032806:18053-18072 | Msa1450170:CDS | 10.0% |
| !! | AATAAAAAAATTAAACAAGG+GGG | + | tig0032806:14996-15015 | None:intergenic | 15.0% |
| !! | CAATAAAAAAATTAAACAAG+GGG | + | tig0032806:14997-15016 | None:intergenic | 15.0% |
| !! | CTCAATAAAAAAATTAAACA+AGG | + | tig0032806:14999-15018 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTGTGTCTA+TGG | - | tig0032806:15096-15115 | Msa1450170:intron | 15.0% |
| !!! | TTTTTTATACTGAATGTATT+TGG | - | tig0032806:16881-16900 | Msa1450170:intron | 15.0% |
| !!! | AAATTCTCTAAAAAAATGTT+TGG | - | tig0032806:17042-17061 | Msa1450170:intron | 15.0% |
| !! | TACATGTTAAAAAATCTATT+GGG | + | tig0032806:17665-17684 | None:intergenic | 15.0% |
| !! | ATACATGTTAAAAAATCTAT+TGG | + | tig0032806:17666-17685 | None:intergenic | 15.0% |
| !! | AAAGATCAAAGAAAATAAAT+AGG | + | tig0032806:18101-18120 | None:intergenic | 15.0% |
| !! | TTCTAAATTCATTAGAATAT+TGG | - | tig0032806:18814-18833 | Msa1450170:intron | 15.0% |
| !!! | CTGTTTAATTTTTTATTATC+CGG | - | tig0032806:18956-18975 | Msa1450170:intron | 15.0% |
| !!! | TTTTTATGTTCATATTCAAT+GGG | - | tig0032806:19098-19117 | Msa1450170:CDS | 15.0% |
| !!! | TCTTATTTCTGATTATTTAT+TGG | - | tig0032806:19137-19156 | Msa1450170:CDS | 15.0% |
| !!! | CTTATTTCTGATTATTTATT+GGG | - | tig0032806:19138-19157 | Msa1450170:CDS | 15.0% |
| !! | TTGAAAAAAAAAGATTATGT+GGG | - | tig0032806:19204-19223 | Msa1450170:five_prime_UTR | 15.0% |
| !!! | GCAATATAAAATGTTTTTTA+CGG | + | tig0032806:19293-19312 | None:intergenic | 15.0% |
| !!! | AGAATGAATATAACAATTTT+TGG | - | tig0032806:19416-19435 | Msa1450170:five_prime_UTR | 15.0% |
| !!! | ACAATTTTTGGTTTAAAAAA+TGG | - | tig0032806:19428-19447 | Msa1450170:five_prime_UTR | 15.0% |
| !! | TAATCAATTCAATTCAATTG+GGG | + | tig0032806:14471-14490 | None:intergenic | 20.0% |
| !! | GTAATCAATTCAATTCAATT+GGG | + | tig0032806:14472-14491 | None:intergenic | 20.0% |
| !! | TGTAATCAATTCAATTCAAT+TGG | + | tig0032806:14473-14492 | None:intergenic | 20.0% |
| !!! | CTTTATTTTGATTTGTAGTA+TGG | - | tig0032806:15192-15211 | Msa1450170:intron | 20.0% |
| !!! | AAAGTTTTGTGTTCAAAAAA+TGG | + | tig0032806:15296-15315 | None:intergenic | 20.0% |
| !!! | GTTTCTATGTTTTCTTTAAA+TGG | - | tig0032806:15463-15482 | Msa1450170:CDS | 20.0% |
| !!! | ATTATATTAGTTAGAGGTTT+TGG | + | tig0032806:16220-16239 | None:intergenic | 20.0% |
| !! | GATTCTATTATATTAGTTAG+AGG | + | tig0032806:16226-16245 | None:intergenic | 20.0% |
| !! | ATATAAGATAGATTTACCTT+GGG | + | tig0032806:16258-16277 | None:intergenic | 20.0% |
| !! | TATATAAGATAGATTTACCT+TGG | + | tig0032806:16259-16278 | None:intergenic | 20.0% |
| !! | AGTGAAAATAAATAGAATCA+AGG | + | tig0032806:16299-16318 | None:intergenic | 20.0% |
| !!! | TTCTTCATCTTATTTTTTCT+AGG | - | tig0032806:16965-16984 | Msa1450170:intron | 20.0% |
| !! | AAATACTTATACAAATGACT+AGG | + | tig0032806:17479-17498 | None:intergenic | 20.0% |
| !! | TAGTCATTTGTATAAGTATT+TGG | - | tig0032806:17478-17497 | Msa1450170:CDS | 20.0% |
| !! | TAGACTTGATGTATAAATAT+TGG | - | tig0032806:17898-17917 | Msa1450170:CDS | 20.0% |
| !!! | GTTTTTATGTTCATATTCAA+TGG | - | tig0032806:19097-19116 | Msa1450170:CDS | 20.0% |
| !!! | CACATAATCTTTTTTTTTCA+AGG | + | tig0032806:19205-19224 | None:intergenic | 20.0% |
| !! | CTTGAAAAAAAAAGATTATG+TGG | - | tig0032806:19203-19222 | Msa1450170:five_prime_UTR | 20.0% |
| !!! | TTTTTTTGTGTCTATGGATT+TGG | - | tig0032806:15102-15121 | Msa1450170:intron | 25.0% |
| !! | CAAATTTATGGTCATGATTT+TGG | - | tig0032806:15168-15187 | Msa1450170:intron | 25.0% |
| ! | GATTTGATTATTTGTTTCCA+TGG | - | tig0032806:15220-15239 | Msa1450170:intron | 25.0% |
| ! | CTCACTTTAAATTATTTCCA+TGG | + | tig0032806:15240-15259 | None:intergenic | 25.0% |
| !! | TTGTCTGATTTTTCTTTTCT+TGG | - | tig0032806:15385-15404 | Msa1450170:intron | 25.0% |
| !! | TTTTCTACCAAATTGATAAG+GGG | + | tig0032806:15503-15522 | None:intergenic | 25.0% |
| !! | CTTTTCTACCAAATTGATAA+GGG | + | tig0032806:15504-15523 | None:intergenic | 25.0% |
| ! | TAATTCTGATTCCTCATTTA+TGG | - | tig0032806:15622-15641 | Msa1450170:intron | 25.0% |
| ! | AATTCTGATTCCTCATTTAT+GGG | - | tig0032806:15623-15642 | Msa1450170:intron | 25.0% |
| !!! | CAAAAGTGTTTTTCTTCTTT+TGG | + | tig0032806:15758-15777 | None:intergenic | 25.0% |
| ! | TAAGATTGATGCGAATAAAT+GGG | - | tig0032806:15946-15965 | Msa1450170:intron | 25.0% |
| ! | TTTATGGAACTTAAAATTCC+GGG | + | tig0032806:16145-16164 | None:intergenic | 25.0% |
| ! | GTTTATGGAACTTAAAATTC+CGG | + | tig0032806:16146-16165 | None:intergenic | 25.0% |
| ! | TACTGATAAAATTTCATCTG+TGG | - | tig0032806:16174-16193 | Msa1450170:intron | 25.0% |
| ! | TATAAGATAGATTTACCTTG+GGG | + | tig0032806:16257-16276 | None:intergenic | 25.0% |
| ! | TTACTGCATTTAGTGAAATT+AGG | - | tig0032806:16502-16521 | Msa1450170:intron | 25.0% |
| ! | CATAGATACAAACTAATTTC+AGG | + | tig0032806:16528-16547 | None:intergenic | 25.0% |
| ! | CAGTTAAATTTAAACTCATC+AGG | - | tig0032806:16610-16629 | Msa1450170:intron | 25.0% |
| ! | AGCTTAAGCAAATGTATTAT+TGG | + | tig0032806:16783-16802 | None:intergenic | 25.0% |
| ! | TAATACATTTGCTTAAGCTT+TGG | - | tig0032806:16784-16803 | Msa1450170:intron | 25.0% |
| ! | AATACATTTGCTTAAGCTTT+GGG | - | tig0032806:16785-16804 | Msa1450170:intron | 25.0% |
| ! | TATTTGGATGATAGTTTCTA+TGG | - | tig0032806:16897-16916 | Msa1450170:intron | 25.0% |
| ! | TAGTATATAAAGTCAGCTTA+GGG | - | tig0032806:16938-16957 | Msa1450170:intron | 25.0% |
| ! | GACTTAAAAATTAACAGAGT+TGG | - | tig0032806:17203-17222 | Msa1450170:intron | 25.0% |
| !! | CATTGCATTTAAGTTACATT+TGG | - | tig0032806:17426-17445 | Msa1450170:intron | 25.0% |
| ! | ATAAGCTGAAAACAACTTAT+AGG | + | tig0032806:17532-17551 | None:intergenic | 25.0% |
| ! | GAATATTCTGATTTCTAAGT+GGG | - | tig0032806:17708-17727 | Msa1450170:CDS | 25.0% |
| ! | AATATTCTGATTTCTAAGTG+GGG | - | tig0032806:17709-17728 | Msa1450170:CDS | 25.0% |
| !!! | TCTTTCTCGTTTTATTGAAA+TGG | + | tig0032806:17781-17800 | None:intergenic | 25.0% |
| !! | TTTTTAATCAAAATCCAGTG+AGG | - | tig0032806:17946-17965 | Msa1450170:CDS | 25.0% |
| ! | GTATTATCATACCTTCAAAT+TGG | - | tig0032806:18558-18577 | Msa1450170:intron | 25.0% |
| !! | TGATTGTTCAAAGCTAATTT+TGG | + | tig0032806:18707-18726 | None:intergenic | 25.0% |
| ! | TCTAATGAATTTAGAAAGCA+AGG | + | tig0032806:18810-18829 | None:intergenic | 25.0% |
| ! | AATCAAGAAAATATTCGAGT+TGG | + | tig0032806:18870-18889 | None:intergenic | 25.0% |
| !!! | ATTTTTTATTATCCGGTTGT+AGG | - | tig0032806:18963-18982 | Msa1450170:CDS | 25.0% |
| !!! | TTTTTTATTATCCGGTTGTA+GGG | - | tig0032806:18964-18983 | Msa1450170:CDS | 25.0% |
| ! | ATGAGAAAATTTGACAAAAG+AGG | + | tig0032806:19170-19189 | None:intergenic | 25.0% |
| !! | CTGTTGTTGGTTGATTTTAA+TGG | + | tig0032806:14584-14603 | None:intergenic | 30.0% |
| GTTGTTAGAAAATGTAGTTG+TGG | + | tig0032806:14613-14632 | None:intergenic | 30.0% | |
| TTTCAGAGTGAAAAAGCAAA+AGG | + | tig0032806:14648-14667 | None:intergenic | 30.0% | |
| TTAATAGTGCTTACCAGAAA+CGG | + | tig0032806:14942-14961 | None:intergenic | 30.0% | |
| TGGAAAGTAAAGAACTTTAG+TGG | + | tig0032806:15033-15052 | None:intergenic | 30.0% | |
| !! | TTGGTTTGTTTCAAGTTAGT+TGG | - | tig0032806:15121-15140 | Msa1450170:intron | 30.0% |
| TCTTGGTTTCTTACTTATTC+TGG | - | tig0032806:15402-15421 | Msa1450170:intron | 30.0% | |
| ! | TGTTTTTCCCCTTATCAATT+TGG | - | tig0032806:15493-15512 | Msa1450170:CDS | 30.0% |
| ! | GCTTTTCTACCAAATTGATA+AGG | + | tig0032806:15505-15524 | None:intergenic | 30.0% |
| TATCAATTTGGTAGAAAAGC+AGG | - | tig0032806:15505-15524 | Msa1450170:CDS | 30.0% | |
| !!! | CATCAAATGTGAGTTTTGAA+AGG | + | tig0032806:15684-15703 | None:intergenic | 30.0% |
| TCAAAACTCACATTTGATGA+AGG | - | tig0032806:15685-15704 | Msa1450170:intron | 30.0% | |
| !! | CTTTTGGCTATTGAATATGT+TGG | + | tig0032806:15742-15761 | None:intergenic | 30.0% |
| AATATCTGAGAACTAGAAGA+TGG | + | tig0032806:15908-15927 | None:intergenic | 30.0% | |
| CTAAGATTGATGCGAATAAA+TGG | - | tig0032806:15945-15964 | Msa1450170:intron | 30.0% | |
| ! | TAAGCTTGTTTGAAGTTAGT+TGG | + | tig0032806:16048-16067 | None:intergenic | 30.0% |
| AACTAACTTCAAACAAGCTT+AGG | - | tig0032806:16047-16066 | Msa1450170:intron | 30.0% | |
| ACTAACTTCAAACAAGCTTA+GGG | - | tig0032806:16048-16067 | Msa1450170:intron | 30.0% | |
| TTATGGAACTTAAAATTCCG+GGG | + | tig0032806:16144-16163 | None:intergenic | 30.0% | |
| ! | TGAAATTTTATCAGTAGCAG+CGG | + | tig0032806:16170-16189 | None:intergenic | 30.0% |
| ATAAGATAGATTTACCTTGG+GGG | + | tig0032806:16256-16275 | None:intergenic | 30.0% | |
| ! | TTAATCGACGTTATGCATTT+TGG | - | tig0032806:16344-16363 | Msa1450170:intron | 30.0% |
| AATGATCCTTAAATCAACCA+CGG | + | tig0032806:16579-16598 | None:intergenic | 30.0% | |
| CGACTATCAATACCATATTT+CGG | + | tig0032806:16642-16661 | None:intergenic | 30.0% | |
| !! | CGAAATATGGTATTGATAGT+CGG | - | tig0032806:16640-16659 | Msa1450170:intron | 30.0% |
| ! | AAACAGTCTTTTTCTCTTAC+TGG | - | tig0032806:16831-16850 | Msa1450170:intron | 30.0% |
| CTAGTATATAAAGTCAGCTT+AGG | - | tig0032806:16937-16956 | Msa1450170:intron | 30.0% | |
| TGAAAACTTCCAAATTTCAG+CGG | + | tig0032806:17022-17041 | None:intergenic | 30.0% | |
| CGAATCCATCAAGAAATTTA+AGG | - | tig0032806:17178-17197 | Msa1450170:intron | 30.0% | |
| CTACTATAAGACTAGAGTTT+GGG | + | tig0032806:17624-17643 | None:intergenic | 30.0% | |
| ACTACTATAAGACTAGAGTT+TGG | + | tig0032806:17625-17644 | None:intergenic | 30.0% | |
| GGAATATTCTGATTTCTAAG+TGG | - | tig0032806:17707-17726 | Msa1450170:CDS | 30.0% | |
| ! | TGTTGCTTGATATTGCTTAT+TGG | - | tig0032806:17833-17852 | Msa1450170:CDS | 30.0% |
| !! | TAGGGCAAACTCATTTTTAT+AGG | - | tig0032806:18071-18090 | Msa1450170:intron | 30.0% |
| !! | TCTTTGTCTAGTTCTTGTAA+TGG | - | tig0032806:18120-18139 | Msa1450170:intron | 30.0% |
| ! | AATGATAGTAACTTGCATAG+TGG | - | tig0032806:18360-18379 | Msa1450170:CDS | 30.0% |
| ! | ATAGTGGAGAAAATGAAACA+GGG | - | tig0032806:18376-18395 | Msa1450170:intron | 30.0% |
| AAGAAAAGGATGACACAAAA+AGG | + | tig0032806:18776-18795 | None:intergenic | 30.0% | |
| !! | AGAAAATATTCGAGTTGGTT+CGG | + | tig0032806:18865-18884 | None:intergenic | 30.0% |
| AGAAGACGAGAAATTTCATA+TGG | + | tig0032806:18909-18928 | None:intergenic | 30.0% | |
| ! | TTTTTATTATCCGGTTGTAG+GGG | - | tig0032806:18965-18984 | Msa1450170:CDS | 30.0% |
| TGCTAAAGATACTAGAAATC+CGG | - | tig0032806:19007-19026 | Msa1450170:CDS | 30.0% | |
| AGAAATAAGAGAAAGCTCTT+GGG | + | tig0032806:19127-19146 | None:intergenic | 30.0% | |
| ATAGTTAGAATCAGAACGAT+AGG | - | tig0032806:19391-19410 | Msa1450170:five_prime_UTR | 30.0% | |
| AGAGTGAAATGGGTAATCAA+TGG | - | tig0032806:14724-14743 | Msa1450170:three_prime_UTR | 35.0% | |
| ACAACAACAACAACATCAGT+GGG | - | tig0032806:14786-14805 | Msa1450170:three_prime_UTR | 35.0% | |
| !! | AAAATCATGGAGGAAGTGTT+GGG | + | tig0032806:14813-14832 | None:intergenic | 35.0% |
| !!! | TCCATTTTTTCTTCTCTCAG+TGG | - | tig0032806:15049-15068 | Msa1450170:intron | 35.0% |
| !!! | CCATTTTTTCTTCTCTCAGT+GGG | - | tig0032806:15050-15069 | Msa1450170:intron | 35.0% |
| ACCATAAATTTGCATACCAG+GGG | + | tig0032806:15160-15179 | None:intergenic | 35.0% | |
| GACCATAAATTTGCATACCA+GGG | + | tig0032806:15161-15180 | None:intergenic | 35.0% | |
| TGACCATAAATTTGCATACC+AGG | + | tig0032806:15162-15181 | None:intergenic | 35.0% | |
| TCATGTGAATGTTTGTGCAT+TGG | - | tig0032806:15322-15341 | Msa1450170:intron | 35.0% | |
| CATGTGAATGTTTGTGCATT+GGG | - | tig0032806:15323-15342 | Msa1450170:intron | 35.0% | |
| TGCCAGAAAAATCACTTCTT+GGG | + | tig0032806:15565-15584 | None:intergenic | 35.0% | |
| TGAGATAAGTAACAGACTAG+TGG | - | tig0032806:15586-15605 | Msa1450170:CDS | 35.0% | |
| GAGATAAGTAACAGACTAGT+GGG | - | tig0032806:15587-15606 | Msa1450170:CDS | 35.0% | |
| AGATAAGTAACAGACTAGTG+GGG | - | tig0032806:15588-15607 | Msa1450170:CDS | 35.0% | |
| !!! | GTGAGTTTTGAAAGGAATCA+GGG | + | tig0032806:15676-15695 | None:intergenic | 35.0% |
| !!! | TGTGAGTTTTGAAAGGAATC+AGG | + | tig0032806:15677-15696 | None:intergenic | 35.0% |
| TTGGCTATTGAATATGTTGG+AGG | + | tig0032806:15739-15758 | None:intergenic | 35.0% | |
| ATTCGCATCAATCTTAGTGT+TGG | + | tig0032806:15942-15961 | None:intergenic | 35.0% | |
| ! | TATTTTCACTCCCTTTACGT+TGG | - | tig0032806:16309-16328 | Msa1450170:intron | 35.0% |
| CATAAAAGATAGTCATCTGG+CGG | + | tig0032806:16407-16426 | None:intergenic | 35.0% | |
| CTCCATAAAAGATAGTCATC+TGG | + | tig0032806:16410-16429 | None:intergenic | 35.0% | |
| ! | CAGATGACTATCTTTTATGG+AGG | - | tig0032806:16408-16427 | Msa1450170:intron | 35.0% |
| TATGACACGTTAAGAATACG+AGG | + | tig0032806:16477-16496 | None:intergenic | 35.0% | |
| ! | ACAGCAACATAAGTGTTGTA+CGG | + | tig0032806:16675-16694 | None:intergenic | 35.0% |
| TGTGCAATGACTATCCAAAT+AGG | + | tig0032806:16706-16725 | None:intergenic | 35.0% | |
| TGGATAGTCATTGCACAATA+TGG | - | tig0032806:16709-16728 | Msa1450170:intron | 35.0% | |
| ATAGTCATTGCACAATATGG+TGG | - | tig0032806:16712-16731 | Msa1450170:intron | 35.0% | |
| AAAACTTCCAAATTTCAGCG+GGG | + | tig0032806:17020-17039 | None:intergenic | 35.0% | |
| GAAAACTTCCAAATTTCAGC+GGG | + | tig0032806:17021-17040 | None:intergenic | 35.0% | |
| GTCAGCCTTAAATTTCTTGA+TGG | + | tig0032806:17186-17205 | None:intergenic | 35.0% | |
| TGCAACCTATGTTGTATTGA+AGG | - | tig0032806:17307-17326 | Msa1450170:intron | 35.0% | |
| TTGCTCCTTCAATACAACAT+AGG | + | tig0032806:17315-17334 | None:intergenic | 35.0% | |
| GGGGTAAAAAAAAACTGTAG+TGG | - | tig0032806:17728-17747 | Msa1450170:CDS | 35.0% | |
| TTCACAGTTGAAGTGATTGA+TGG | + | tig0032806:17754-17773 | None:intergenic | 35.0% | |
| CAACTGATGATCAACACTTT+CGG | + | tig0032806:17861-17880 | None:intergenic | 35.0% | |
| TCAAGTCTAACAGTAACACT+CGG | + | tig0032806:17887-17906 | None:intergenic | 35.0% | |
| ACAATTTAACTGATCCTCAC+TGG | + | tig0032806:17963-17982 | None:intergenic | 35.0% | |
| ! | TCCTAAATTCTGACTTGAGT+TGG | - | tig0032806:17987-18006 | Msa1450170:CDS | 35.0% |
| ATGGATCAATCAATGCCTTT+GGG | - | tig0032806:18014-18033 | Msa1450170:CDS | 35.0% | |
| ! | TGGTTTTTGATAAAGCCCAA+AGG | + | tig0032806:18032-18051 | None:intergenic | 35.0% |
| TCTTCACATGTCATAACAGA+AGG | - | tig0032806:18184-18203 | Msa1450170:intron | 35.0% | |
| TATGCAGGCAGATGTTATAA+TGG | - | tig0032806:18269-18288 | Msa1450170:CDS | 35.0% | |
| !! | ATGTTATAATGGCTTTGGCT+GGG | - | tig0032806:18280-18299 | Msa1450170:CDS | 35.0% |
| ! | CATAGTGGAGAAAATGAAAC+AGG | - | tig0032806:18375-18394 | Msa1450170:intron | 35.0% |
| CAAACTATGTAGTATGCTTG+AGG | + | tig0032806:18513-18532 | None:intergenic | 35.0% | |
| GCATACTACATAGTTTGATC+TGG | - | tig0032806:18516-18535 | Msa1450170:intron | 35.0% | |
| TTCAATCACTGCCAATTTGA+AGG | + | tig0032806:18572-18591 | None:intergenic | 35.0% | |
| ! | ATACTGCAGGCGATATTTTT+GGG | + | tig0032806:18614-18633 | None:intergenic | 35.0% |
| GTTGTCCGATCTCATATTAA+CGG | + | tig0032806:18669-18688 | None:intergenic | 35.0% | |
| AAGGATGACACAAAAAGGAT+CGG | + | tig0032806:18771-18790 | None:intergenic | 35.0% | |
| AGGCATGTAAGGTAAAGAAA+AGG | + | tig0032806:18790-18809 | None:intergenic | 35.0% | |
| TTTAGAAAGCAAGGCATGTA+AGG | + | tig0032806:18801-18820 | None:intergenic | 35.0% | |
| !! | GAAAATATTCGAGTTGGTTC+GGG | + | tig0032806:18864-18883 | None:intergenic | 35.0% |
| TAAAGATACTAGAAATCCGG+CGG | - | tig0032806:19010-19029 | Msa1450170:CDS | 35.0% | |
| CAGAAATAAGAGAAAGCTCT+TGG | + | tig0032806:19128-19147 | None:intergenic | 35.0% | |
| ATTATGTGGGAAACAAGAGT+AGG | - | tig0032806:19217-19236 | Msa1450170:five_prime_UTR | 35.0% | |
| AAGAGTAGGATGATTGTGTA+AGG | - | tig0032806:19231-19250 | Msa1450170:five_prime_UTR | 35.0% | |
| ! | GTTGTGGAGTTTTCTGTTGT+TGG | + | tig0032806:14597-14616 | None:intergenic | 40.0% |
| GTGAAATGGGTAATCAATGG+CGG | - | tig0032806:14727-14746 | Msa1450170:three_prime_UTR | 40.0% | |
| CACAACAACAACAACATCAG+TGG | - | tig0032806:14785-14804 | Msa1450170:three_prime_UTR | 40.0% | |
| ! | GAAAATCATGGAGGAAGTGT+TGG | + | tig0032806:14814-14833 | None:intergenic | 40.0% |
| ! | CACTTCCTCCATGATTTTCT+CGG | - | tig0032806:14815-14834 | Msa1450170:exon | 40.0% |
| CCCACTGAGAGAAGAAAAAA+TGG | + | tig0032806:15053-15072 | None:intergenic | 40.0% | |
| CCATAAATTTGCATACCAGG+GGG | + | tig0032806:15159-15178 | None:intergenic | 40.0% | |
| GTGCCAGAAAAATCACTTCT+TGG | + | tig0032806:15566-15585 | None:intergenic | 40.0% | |
| !!! | CTCAAGTCCTGTTTTTGTAC+AGG | - | tig0032806:15802-15821 | Msa1450170:intron | 40.0% |
| AGTAACACTTCGTCGTCATT+AGG | + | tig0032806:15866-15885 | None:intergenic | 40.0% | |
| ! | AATGACGACGAAGTGTTACT+TGG | - | tig0032806:15866-15885 | Msa1450170:intron | 40.0% |
| CGATCTATTCTCATGAATGC+TGG | - | tig0032806:15971-15990 | Msa1450170:intron | 40.0% | |
| ! | GAAGTTAGTTGGTGTGCAAA+AGG | + | tig0032806:16037-16056 | None:intergenic | 40.0% |
| CAGGCTGAGAGATAAATGAA+GGG | + | tig0032806:16087-16106 | None:intergenic | 40.0% | |
| !! | AGTTCTAGATCCTTCATCAG+CGG | + | tig0032806:16110-16129 | None:intergenic | 40.0% |
| ! | GGATCTAGAACTGGAATCAA+AGG | - | tig0032806:16118-16137 | Msa1450170:intron | 40.0% |
| !! | ATTTCATCTGTGGTGTTGCT+CGG | - | tig0032806:16184-16203 | Msa1450170:intron | 40.0% |
| ! | TCTCCTTTTGCCAACGTAAA+GGG | + | tig0032806:16322-16341 | None:intergenic | 40.0% |
| ! | TTCTCCTTTTGCCAACGTAA+AGG | + | tig0032806:16323-16342 | None:intergenic | 40.0% |
| CATTGAACAGCAGTCAACAT+GGG | - | tig0032806:16367-16386 | Msa1450170:intron | 40.0% | |
| ! | CGCCAGATGACTATCTTTTA+TGG | - | tig0032806:16405-16424 | Msa1450170:intron | 40.0% |
| ! | TGATGATGTCCACCAACATA+AGG | - | tig0032806:16446-16465 | Msa1450170:intron | 40.0% |
| ! | GTTCATCCGTGGTTGATTTA+AGG | - | tig0032806:16570-16589 | Msa1450170:intron | 40.0% |
| ATCAGGTTTCAGCCGAAATA+TGG | - | tig0032806:16627-16646 | Msa1450170:intron | 40.0% | |
| !! | TGCTGTTTCTACAGCCTATT+TGG | - | tig0032806:16689-16708 | Msa1450170:intron | 40.0% |
| TATGTTTCCCCGCTGAAATT+TGG | - | tig0032806:17010-17029 | Msa1450170:intron | 40.0% | |
| CTTAGCATCAGCAATGTGTT+TGG | + | tig0032806:17072-17091 | None:intergenic | 40.0% | |
| CCTGCTTGGTTAAGATTTCA+GGG | + | tig0032806:17393-17412 | None:intergenic | 40.0% | |
| CCTGAAATCTTAACCAAGCA+GGG | - | tig0032806:17391-17410 | Msa1450170:intron | 40.0% | |
| GCTGAATGAGAATCAAAGAG+GGG | + | tig0032806:17602-17621 | None:intergenic | 40.0% | |
| GGCTGAATGAGAATCAAAGA+GGG | + | tig0032806:17603-17622 | None:intergenic | 40.0% | |
| ACATGTATACCCAAGACAGT+AGG | - | tig0032806:17678-17697 | Msa1450170:CDS | 40.0% | |
| CATGTATACCCAAGACAGTA+GGG | - | tig0032806:17679-17698 | Msa1450170:CDS | 40.0% | |
| GCCAACTCAAGTCAGAATTT+AGG | + | tig0032806:17991-18010 | None:intergenic | 40.0% | |
| CATGGATCAATCAATGCCTT+TGG | - | tig0032806:18013-18032 | Msa1450170:CDS | 40.0% | |
| ! | AAGAGACGCATAGTTTGTCT+TGG | - | tig0032806:18153-18172 | Msa1450170:intron | 40.0% |
| ! | AGAGACGCATAGTTTGTCTT+GGG | - | tig0032806:18154-18173 | Msa1450170:intron | 40.0% |
| GGCAGATGTTATAATGGCTT+TGG | - | tig0032806:18275-18294 | Msa1450170:CDS | 40.0% | |
| !! | GATGTTATAATGGCTTTGGC+TGG | - | tig0032806:18279-18298 | Msa1450170:CDS | 40.0% |
| ACCAGCTTTGCAGTAGATTT+CGG | + | tig0032806:18339-18358 | None:intergenic | 40.0% | |
| ! | AACAGGGTTAGTGAGTAATG+TGG | - | tig0032806:18392-18411 | Msa1450170:intron | 40.0% |
| GTAGTATGCTTGAGGATTAC+CGG | + | tig0032806:18505-18524 | None:intergenic | 40.0% | |
| !! | TACTGCAGGCGATATTTTTG+GGG | + | tig0032806:18613-18632 | None:intergenic | 40.0% |
| ! | GATACTGCAGGCGATATTTT+TGG | + | tig0032806:18615-18634 | None:intergenic | 40.0% |
| TTTACTGCGTCAAACTGTGT+GGG | + | tig0032806:18637-18656 | None:intergenic | 40.0% | |
| TTTGACGCAGTAAACGATCT+CGG | - | tig0032806:18643-18662 | Msa1450170:intron | 40.0% | |
| ACAAAAAGGATCGGTGGAAT+TGG | + | tig0032806:18762-18781 | None:intergenic | 40.0% | |
| AGCTATGCAGCAGAGTGAAA+TGG | - | tig0032806:14713-14732 | Msa1450170:three_prime_UTR | 45.0% | |
| GCTATGCAGCAGAGTGAAAT+GGG | - | tig0032806:14714-14733 | Msa1450170:three_prime_UTR | 45.0% | |
| TCATGCCGAGAAAATCATGG+AGG | + | tig0032806:14823-14842 | None:intergenic | 45.0% | |
| GCTTCATGCCGAGAAAATCA+TGG | + | tig0032806:14826-14845 | None:intergenic | 45.0% | |
| GTGCTTACCAGAAACGGTTT+CGG | + | tig0032806:14936-14955 | None:intergenic | 45.0% | |
| CCCCCTGGTATGCAAATTTA+TGG | - | tig0032806:15156-15175 | Msa1450170:intron | 45.0% | |
| !! | CAGGTATCGAATCATCTCGA+GGG | - | tig0032806:15524-15543 | Msa1450170:CDS | 45.0% |
| TCACTTCTTGGGCCATAGAA+TGG | + | tig0032806:15554-15573 | None:intergenic | 45.0% | |
| ! | GGCCCAAGAAGTGATTTTTC+TGG | - | tig0032806:15560-15579 | Msa1450170:CDS | 45.0% |
| TCTGGAGGAACCCATAAATG+AGG | + | tig0032806:15636-15655 | None:intergenic | 45.0% | |
| !! | CATTTGAAAGGCATCTCTGG+AGG | + | tig0032806:15651-15670 | None:intergenic | 45.0% |
| CTCCAGAGATGCCTTTCAAA+TGG | - | tig0032806:15649-15668 | Msa1450170:intron | 45.0% | |
| !! | GACCATTTGAAAGGCATCTC+TGG | + | tig0032806:15654-15673 | None:intergenic | 45.0% |
| GGAATCAGGGACCATTTGAA+AGG | + | tig0032806:15663-15682 | None:intergenic | 45.0% | |
| !! | GCATCAATCTTAGTGTTGGC+GGG | + | tig0032806:15938-15957 | None:intergenic | 45.0% |
| ! | CGCATCAATCTTAGTGTTGG+CGG | + | tig0032806:15939-15958 | None:intergenic | 45.0% |
| AAGCTTAGGGATACCATTGC+CGG | - | tig0032806:16061-16080 | Msa1450170:intron | 45.0% | |
| CTGAGAGATAAATGAAGGGC+CGG | + | tig0032806:16083-16102 | None:intergenic | 45.0% | |
| GCAGGCTGAGAGATAAATGA+AGG | + | tig0032806:16088-16107 | None:intergenic | 45.0% | |
| ! | GCTGATGAAGGATCTAGAAC+TGG | - | tig0032806:16109-16128 | Msa1450170:intron | 45.0% |
| ATCAGTAGCAGCGGTGTTTA+TGG | + | tig0032806:16161-16180 | None:intergenic | 45.0% | |
| ACTCCCTTTACGTTGGCAAA+AGG | - | tig0032806:16316-16335 | Msa1450170:intron | 45.0% | |
| GCATTGAACAGCAGTCAACA+TGG | - | tig0032806:16366-16385 | Msa1450170:intron | 45.0% | |
| TACGAGGTCAGACCTTATGT+TGG | + | tig0032806:16461-16480 | None:intergenic | 45.0% | |
| !! | TGCTTAAGCTTTGGGTACAC+TGG | - | tig0032806:16793-16812 | Msa1450170:intron | 45.0% |
| TCGTGTTCGATGCAAAATGC+TGG | + | tig0032806:17161-17180 | None:intergenic | 45.0% | |
| TGTTAGACATGCACTCAGAG+TGG | - | tig0032806:17244-17263 | Msa1450170:intron | 45.0% | |
| CGAACAGACAGCTAATCAAC+TGG | + | tig0032806:17270-17289 | None:intergenic | 45.0% | |
| CTATGCACTCTCAACGAAAG+GGG | + | tig0032806:17343-17362 | None:intergenic | 45.0% | |
| CCTATGCACTCTCAACGAAA+GGG | + | tig0032806:17344-17363 | None:intergenic | 45.0% | |
| TCCTATGCACTCTCAACGAA+AGG | + | tig0032806:17345-17364 | None:intergenic | 45.0% | |
| CCCTGAAATCTTAACCAAGC+AGG | - | tig0032806:17390-17409 | Msa1450170:intron | 45.0% | |
| CCCTGCTTGGTTAAGATTTC+AGG | + | tig0032806:17394-17413 | None:intergenic | 45.0% | |
| AGAATCAAAGAGGGGTCTCA+GGG | + | tig0032806:17594-17613 | None:intergenic | 45.0% | |
| GGGCTGAATGAGAATCAAAG+AGG | + | tig0032806:17604-17623 | None:intergenic | 45.0% | |
| CAACACATCTCGCATTTCGA+AGG | + | tig0032806:17818-17837 | None:intergenic | 45.0% | |
| !! | TCTGACTTGAGTTGGCTACA+TGG | - | tig0032806:17995-18014 | Msa1450170:CDS | 45.0% |
| ACCGAAATCTACTGCAAAGC+TGG | - | tig0032806:18335-18354 | Msa1450170:CDS | 45.0% | |
| CATTCCCACAAGAGCTTCAT+GGG | - | tig0032806:18415-18434 | Msa1450170:intron | 45.0% | |
| ACTTCCCATGAAGCTCTTGT+GGG | + | tig0032806:18422-18441 | None:intergenic | 45.0% | |
| AACTTCCCATGAAGCTCTTG+TGG | + | tig0032806:18423-18442 | None:intergenic | 45.0% | |
| ! | TACCGGTTGGAGTAGATACA+CGG | + | tig0032806:18488-18507 | None:intergenic | 45.0% |
| TATGCTTGAGGATTACCGGT+TGG | + | tig0032806:18501-18520 | None:intergenic | 45.0% | |
| GTTTACTGCGTCAAACTGTG+TGG | + | tig0032806:18638-18657 | None:intergenic | 45.0% | |
| CTCGGCCGTTAATATGAGAT+CGG | - | tig0032806:18661-18680 | Msa1450170:intron | 45.0% | |
| GATGACACAAAAAGGATCGG+TGG | + | tig0032806:18768-18787 | None:intergenic | 45.0% | |
| ! | GCTCTTTTGTCTTCGGAACT+GGG | + | tig0032806:19050-19069 | None:intergenic | 45.0% |
| ! | TCACTGCGCTCTTTTGTCTT+CGG | + | tig0032806:19057-19076 | None:intergenic | 45.0% |
| TCTAAACCAGTCACCGTATC+AGG | - | tig0032806:19317-19336 | Msa1450170:five_prime_UTR | 45.0% | |
| AGAAGCTGCTTGACCTGATA+CGG | + | tig0032806:19333-19352 | None:intergenic | 45.0% | |
| !! | AAAAAAAAAAAAAAAATTGA+GGG | + | tig0032806:15088-15107 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAAAAATTG+AGG | + | tig0032806:15089-15108 | None:intergenic | 5.0% |
| ! | ATCAATGGCGGTGCTGAGAA+TGG | - | tig0032806:14739-14758 | Msa1450170:three_prime_UTR | 50.0% |
| !! | ACGTCGGTGGAAGTATCAGT+GGG | + | tig0032806:14848-14867 | None:intergenic | 50.0% |
| !! | AACGTCGGTGGAAGTATCAG+TGG | + | tig0032806:14849-14868 | None:intergenic | 50.0% |
| CTGATACTTCCACCGACGTT+AGG | - | tig0032806:14849-14868 | Msa1450170:CDS | 50.0% | |
| TTCCACCGACGTTAGGTTAC+CGG | - | tig0032806:14856-14875 | Msa1450170:CDS | 50.0% | |
| TTTCGGAGGTGGAGGAGAAA+GGG | + | tig0032806:14919-14938 | None:intergenic | 50.0% | |
| CTTACCAGAAACGGTTTCGG+AGG | + | tig0032806:14933-14952 | None:intergenic | 50.0% | |
| ! | TGGAGTTGATTGTTTCCCCC+TGG | - | tig0032806:15141-15160 | Msa1450170:intron | 50.0% |
| !! | GCAGGTATCGAATCATCTCG+AGG | - | tig0032806:15523-15542 | Msa1450170:CDS | 50.0% |
| CTCGAGGGAGTTCCATTCTA+TGG | - | tig0032806:15539-15558 | Msa1450170:CDS | 50.0% | |
| CGGAGGACCTGTACAAAAAC+AGG | + | tig0032806:15812-15831 | None:intergenic | 50.0% | |
| TCTCTCCTCCAGACGCATTT+CGG | + | tig0032806:15832-15851 | None:intergenic | 50.0% | |
| CTGGAGGAGAGAGATCTAGA+AGG | - | tig0032806:15840-15859 | Msa1450170:intron | 50.0% | |
| !! | TCAATCTTAGTGTTGGCGGG+AGG | + | tig0032806:15935-15954 | None:intergenic | 50.0% |
| GATAAATGAAGGGCCGGCAA+TGG | + | tig0032806:16077-16096 | None:intergenic | 50.0% | |
| AGAACTGGAATCAAAGGCCC+CGG | - | tig0032806:16124-16143 | Msa1450170:intron | 50.0% | |
| ATAGATTTACCTTGGGGGCG+TGG | + | tig0032806:16251-16270 | None:intergenic | 50.0% | |
| AAAGATAGTCATCTGGCGGC+TGG | + | tig0032806:16403-16422 | None:intergenic | 50.0% | |
| GAGGTCAGACCTTATGTTGG+TGG | + | tig0032806:16458-16477 | None:intergenic | 50.0% | |
| ! | CCCTTTCGTTGAGAGTGCAT+AGG | - | tig0032806:17341-17360 | Msa1450170:intron | 50.0% |
| GAGAATCAAAGAGGGGTCTC+AGG | + | tig0032806:17595-17614 | None:intergenic | 50.0% | |
| CATGACAATTGCACGCGCTT+TGG | - | tig0032806:18244-18263 | Msa1450170:CDS | 50.0% | |
| !! | ATGGCTTTGGCTGGGTCAAA+TGG | - | tig0032806:18288-18307 | Msa1450170:CDS | 50.0% |
| !! | CTGGGTCAAATGGTGGATCT+TGG | - | tig0032806:18298-18317 | Msa1450170:CDS | 50.0% |
| GCATTCCCACAAGAGCTTCA+TGG | - | tig0032806:18414-18433 | Msa1450170:intron | 50.0% | |
| CATGGGAAGTTGTCTGCTAC+TGG | - | tig0032806:18432-18451 | Msa1450170:intron | 50.0% | |
| TACACGGTCAACAGGTCCAA+CGG | + | tig0032806:18472-18491 | None:intergenic | 50.0% | |
| GGAGTAGATACACGGTCAAC+AGG | + | tig0032806:18480-18499 | None:intergenic | 50.0% | |
| GACCGTGTATCTACTCCAAC+CGG | - | tig0032806:18483-18502 | Msa1450170:intron | 50.0% | |
| CAAACTGTGTGGGATACTGC+AGG | + | tig0032806:18627-18646 | None:intergenic | 50.0% | |
| !! | TTGGTTCGGGCAAGGTCTAA+AGG | + | tig0032806:18851-18870 | None:intergenic | 50.0% |
| !! | TATTCGAGTTGGTTCGGGCA+AGG | + | tig0032806:18859-18878 | None:intergenic | 50.0% |
| CCTTGATGTACCCCTACAAC+CGG | + | tig0032806:18978-18997 | None:intergenic | 50.0% | |
| ! | CGCTCTTTTGTCTTCGGAAC+TGG | + | tig0032806:19051-19070 | None:intergenic | 50.0% |
| CGAGAGAGAGAGAGAGAGAG+AGG | + | tig0032806:14685-14704 | None:intergenic | 55.0% | |
| TGCCTCCGGTAACCTAACGT+CGG | + | tig0032806:14864-14883 | None:intergenic | 55.0% | |
| GTTTCGGAGGTGGAGGAGAA+AGG | + | tig0032806:14920-14939 | None:intergenic | 55.0% | |
| AGAAACGGTTTCGGAGGTGG+AGG | + | tig0032806:14927-14946 | None:intergenic | 55.0% | |
| TCCACCTCCGAAACCGTTTC+TGG | - | tig0032806:14926-14945 | Msa1450170:intron | 55.0% | |
| ACCAGAAACGGTTTCGGAGG+TGG | + | tig0032806:14930-14949 | None:intergenic | 55.0% | |
| CTAGATCCTTCATCAGCGGC+AGG | + | tig0032806:16106-16125 | None:intergenic | 55.0% | |
| !! | TCATCTGTGGTGTTGCTCGG+TGG | - | tig0032806:16187-16206 | Msa1450170:intron | 55.0% |
| TAGAATCATCCACGCCCCCA+AGG | - | tig0032806:16239-16258 | Msa1450170:intron | 55.0% | |
| TTCGGTCTGCAGTTCATCCG+TGG | - | tig0032806:16559-16578 | Msa1450170:intron | 55.0% | |
| GCTTGAGTCAAGACCCTGCT+TGG | + | tig0032806:17407-17426 | None:intergenic | 55.0% | |
| TACCCAAGACAGTAGGGTGC+AGG | - | tig0032806:17685-17704 | Msa1450170:CDS | 55.0% | |
| ACCCAAGACAGTAGGGTGCA+GGG | - | tig0032806:17686-17705 | Msa1450170:CDS | 55.0% | |
| TCCCTGCACCCTACTGTCTT+GGG | + | tig0032806:17690-17709 | None:intergenic | 55.0% | |
| TTCCCTGCACCCTACTGTCT+TGG | + | tig0032806:17691-17710 | None:intergenic | 55.0% | |
| GCTTTGGCTGGGTCAAATGG+TGG | - | tig0032806:18291-18310 | Msa1450170:CDS | 55.0% | |
| ! | CCGGTTGTAGGGGTACATCA+AGG | - | tig0032806:18975-18994 | Msa1450170:CDS | 55.0% |
| GCTTGACCTGATACGGTGAC+TGG | + | tig0032806:19326-19345 | None:intergenic | 55.0% | |
| CTCCGGTAACCTAACGTCGG+TGG | + | tig0032806:14861-14880 | None:intergenic | 60.0% | |
| CACCGACGTTAGGTTACCGG+AGG | - | tig0032806:14859-14878 | Msa1450170:CDS | 60.0% | |
| GAGGCTGATGCTGATGCCTC+CGG | + | tig0032806:14878-14897 | None:intergenic | 60.0% | |
| CAGGTCCTCCGAAATGCGTC+TGG | - | tig0032806:15821-15840 | Msa1450170:intron | 60.0% | |
| GTCCTCCGAAATGCGTCTGG+AGG | - | tig0032806:15824-15843 | Msa1450170:intron | 60.0% | |
| CTCCTCCAGACGCATTTCGG+AGG | + | tig0032806:15829-15848 | None:intergenic | 60.0% | |
| GCGGAGGATGCTGCATGGAA+GGG | + | tig0032806:15997-16016 | None:intergenic | 60.0% | |
| GGAGTCAACTGTCCTCCACG+CGG | + | tig0032806:16016-16035 | None:intergenic | 60.0% | |
| TCTCAGCCTGCCGCTGATGA+AGG | - | tig0032806:16097-16116 | Msa1450170:intron | 60.0% | |
| ATAGTCATCTGGCGGCTGGC+AGG | + | tig0032806:16399-16418 | None:intergenic | 60.0% | |
| TCAAAGAGGGGTCTCAGGGC+AGG | + | tig0032806:17590-17609 | None:intergenic | 60.0% | |
| GGTCAACAGGTCCAACGGCA+CGG | + | tig0032806:18467-18486 | None:intergenic | 60.0% | |
| ! | GGATCTGCTGCTTGAACCGC+CGG | + | tig0032806:19029-19048 | None:intergenic | 60.0% |
| TCAGCATCAGCCTCCTCCGC+CGG | - | tig0032806:14884-14903 | Msa1450170:CDS | 65.0% | |
| GGAGAAAGGGCCACGAGCAC+CGG | + | tig0032806:14906-14925 | None:intergenic | 65.0% | |
| CGCGGAGGATGCTGCATGGA+AGG | + | tig0032806:15998-16017 | None:intergenic | 65.0% | |
| TCCATGCAGCATCCTCCGCG+TGG | - | tig0032806:15998-16017 | Msa1450170:intron | 65.0% | |
| TCCACGCGGAGGATGCTGCA+TGG | + | tig0032806:16002-16021 | None:intergenic | 65.0% | |
| ATGCAGCATCCTCCGCGTGG+AGG | - | tig0032806:16001-16020 | Msa1450170:intron | 65.0% | |
| GTCAACTGTCCTCCACGCGG+AGG | + | tig0032806:16013-16032 | None:intergenic | 65.0% | |
| ATCTGGCGGCTGGCAGGTGT+TGG | + | tig0032806:16393-16412 | None:intergenic | 65.0% | |
| GCACGCGCTTTGGCGTATGC+AGG | - | tig0032806:18254-18273 | Msa1450170:CDS | 65.0% | |
| ! | GGCAGTTCTAGCCGTGCCGT+TGG | - | tig0032806:18453-18472 | Msa1450170:intron | 65.0% |
| !! | GAAAGGGCCACGAGCACCGG+CGG | + | tig0032806:14903-14922 | None:intergenic | 70.0% |
| ! | GCCTCCTCCGCCGGTGCTCG+TGG | - | tig0032806:14893-14912 | Msa1450170:CDS | 80.0% |
| !!! | GCCACGAGCACCGGCGGAGG+AGG | + | tig0032806:14897-14916 | None:intergenic | 80.0% |
| !!! | AGGGCCACGAGCACCGGCGG+AGG | + | tig0032806:14900-14919 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0032806 | gene | 14450 | 19458 | 14450 | ID=Msa1450170;Name=Msa1450170 |
| tig0032806 | mRNA | 14450 | 19458 | 14450 | ID=Msa1450170-mRNA-1;Parent=Msa1450170;Name=Msa1450170-mRNA-1;_AED=0.07;_eAED=0.07;_QI=293|1|1|1|1|1|6|382|413 |
| tig0032806 | exon | 14450 | 14923 | 14450 | ID=Msa1450170-mRNA-1:exon:17334;Parent=Msa1450170-mRNA-1 |
| tig0032806 | exon | 15404 | 15632 | 15404 | ID=Msa1450170-mRNA-1:exon:17333;Parent=Msa1450170-mRNA-1 |
| tig0032806 | exon | 17441 | 17531 | 17441 | ID=Msa1450170-mRNA-1:exon:17332;Parent=Msa1450170-mRNA-1 |
| tig0032806 | exon | 17648 | 18084 | 17648 | ID=Msa1450170-mRNA-1:exon:17331;Parent=Msa1450170-mRNA-1 |
| tig0032806 | exon | 18202 | 18389 | 18202 | ID=Msa1450170-mRNA-1:exon:17330;Parent=Msa1450170-mRNA-1 |
| tig0032806 | exon | 18961 | 19458 | 18961 | ID=Msa1450170-mRNA-1:exon:17329;Parent=Msa1450170-mRNA-1 |
| tig0032806 | five_prime_UTR | 19166 | 19458 | 19166 | ID=Msa1450170-mRNA-1:five_prime_utr;Parent=Msa1450170-mRNA-1 |
| tig0032806 | CDS | 18961 | 19165 | 18961 | ID=Msa1450170-mRNA-1:cds;Parent=Msa1450170-mRNA-1 |
| tig0032806 | CDS | 18202 | 18389 | 18202 | ID=Msa1450170-mRNA-1:cds;Parent=Msa1450170-mRNA-1 |
| tig0032806 | CDS | 17648 | 18084 | 17648 | ID=Msa1450170-mRNA-1:cds;Parent=Msa1450170-mRNA-1 |
| tig0032806 | CDS | 17441 | 17531 | 17441 | ID=Msa1450170-mRNA-1:cds;Parent=Msa1450170-mRNA-1 |
| tig0032806 | CDS | 15404 | 15632 | 15404 | ID=Msa1450170-mRNA-1:cds;Parent=Msa1450170-mRNA-1 |
| tig0032806 | CDS | 14832 | 14923 | 14832 | ID=Msa1450170-mRNA-1:cds;Parent=Msa1450170-mRNA-1 |
| tig0032806 | three_prime_UTR | 14450 | 14831 | 14450 | ID=Msa1450170-mRNA-1:three_prime_utr;Parent=Msa1450170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
