Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433690 | XP_013461938.1 | 99.812 | 532 | 1 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1070 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433690 | sp|Q9LV21|TCPD_ARATH | 87.873 | 536 | 61 | 1 | 1 | 532 | 1 | 536 | 0.0 | 964 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433690 | A0A072V3N8 | 99.812 | 532 | 1 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1070 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0433690 | Msa0477570 | 0.891141 | 5.205500e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433690 | MtrunA17_Chr3g0139481 | 85.150 | 532 | 22 | 5 | 1 | 532 | 1 | 475 | 0.0 | 877 |
| Msa0433690 | MtrunA17_Chr8g0392171 | 77.524 | 307 | 32 | 6 | 194 | 495 | 1 | 275 | 1.53e-159 | 455 |
| Msa0433690 | MtrunA17_Chr3g0123341 | 37.500 | 512 | 307 | 7 | 24 | 530 | 28 | 531 | 1.27e-103 | 321 |
| Msa0433690 | MtrunA17_Chr7g0272821 | 34.816 | 517 | 318 | 7 | 20 | 530 | 14 | 517 | 2.44e-89 | 284 |
| Msa0433690 | MtrunA17_Chr7g0241881 | 35.029 | 511 | 313 | 7 | 26 | 530 | 20 | 517 | 1.40e-88 | 282 |
| Msa0433690 | MtrunA17_Chr8g0380331 | 34.476 | 525 | 316 | 9 | 24 | 529 | 19 | 534 | 8.06e-85 | 273 |
| Msa0433690 | MtrunA17_Chr5g0440381 | 32.877 | 511 | 323 | 8 | 28 | 529 | 27 | 526 | 2.02e-79 | 259 |
| Msa0433690 | MtrunA17_Chr2g0282161 | 30.528 | 511 | 344 | 7 | 25 | 530 | 20 | 524 | 5.89e-73 | 242 |
| Msa0433690 | MtrunA17_Chr6g0461541 | 28.571 | 511 | 351 | 5 | 23 | 529 | 20 | 520 | 5.84e-69 | 231 |
| Msa0433690 | MtrunA17_Chr1g0160221 | 27.626 | 514 | 358 | 5 | 23 | 532 | 23 | 526 | 1.16e-68 | 230 |
| Msa0433690 | MtrunA17_Chr7g0214841 | 27.519 | 516 | 347 | 10 | 29 | 529 | 22 | 525 | 8.05e-51 | 182 |
| Msa0433690 | MtrunA17_Chr4g0027801 | 47.706 | 109 | 6 | 1 | 296 | 404 | 14 | 71 | 1.07e-18 | 81.3 |
| Msa0433690 | MtrunA17_Chr8g0392161 | 77.500 | 40 | 9 | 0 | 124 | 163 | 32 | 71 | 7.25e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433690 | AT3G18190.1 | 87.873 | 536 | 61 | 1 | 1 | 532 | 1 | 536 | 0.0 | 964 |
| Msa0433690 | AT1G24510.1 | 38.447 | 515 | 304 | 7 | 21 | 530 | 25 | 531 | 2.19e-104 | 323 |
| Msa0433690 | AT1G24510.3 | 37.553 | 474 | 283 | 7 | 62 | 530 | 13 | 478 | 1.84e-89 | 283 |
| Msa0433690 | AT1G24510.2 | 36.933 | 463 | 279 | 7 | 73 | 530 | 1 | 455 | 9.47e-84 | 268 |
| Msa0433690 | AT3G20050.1 | 33.898 | 531 | 323 | 9 | 18 | 529 | 13 | 534 | 9.29e-83 | 268 |
| Msa0433690 | AT5G20890.1 | 33.656 | 517 | 324 | 7 | 20 | 530 | 14 | 517 | 6.94e-82 | 265 |
| Msa0433690 | AT3G11830.1 | 32.485 | 511 | 325 | 7 | 28 | 529 | 27 | 526 | 1.78e-76 | 251 |
| Msa0433690 | AT3G11830.2 | 32.485 | 511 | 323 | 8 | 28 | 529 | 27 | 524 | 1.05e-74 | 247 |
| Msa0433690 | AT3G03960.1 | 28.817 | 524 | 357 | 7 | 14 | 532 | 17 | 529 | 1.04e-71 | 239 |
| Msa0433690 | AT5G26360.1 | 31.311 | 511 | 340 | 7 | 25 | 530 | 20 | 524 | 2.62e-71 | 238 |
| Msa0433690 | AT5G16070.1 | 29.594 | 517 | 324 | 13 | 30 | 520 | 23 | 525 | 7.05e-53 | 188 |
| Msa0433690 | AT3G02530.1 | 28.794 | 514 | 333 | 11 | 30 | 520 | 23 | 526 | 3.35e-51 | 183 |
Find 118 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAGATTGTGAAGATTTC+TGG | 0.204894 | 3_2:+86227132 | Msa0433690:CDS |
| TGTGAAGATTTCTGGTATTA+AGG | 0.209465 | 3_2:+86227140 | Msa0433690:CDS |
| TCTTGCTAAAGCTAAGATTT+TGG | 0.234466 | 3_2:+86226972 | Msa0433690:CDS |
| GATTTCTGGTATTAAGGATA+TGG | 0.239423 | 3_2:+86227146 | Msa0433690:CDS |
| ATCGTCTTTGCGTTTGTTAT+CGG | 0.257624 | 3_2:-86226092 | None:intergenic |
| AGGGATGATTAAGAAGATTA+AGG | 0.275419 | 3_2:+86226876 | Msa0433690:CDS |
| GCATTCTCAGCAAGGGTATA+TGG | 0.307049 | 3_2:-86227405 | None:intergenic |
| CTCTGTTCTATATCCGTCTT+AGG | 0.334855 | 3_2:-86226790 | None:intergenic |
| CTTGTGGAAGAGCTTTCTCT+TGG | 0.336541 | 3_2:+86227105 | Msa0433690:CDS |
| TCACGGAGATCCACCATTTC+CGG | 0.339036 | 3_2:-86226616 | None:intergenic |
| AGCAGCGGAGTCTTGAGATT+TGG | 0.347607 | 3_2:-86226302 | None:intergenic |
| TGTCAAGGCAATTGGGTGCT+TGG | 0.354279 | 3_2:+86227316 | Msa0433690:CDS |
| ATCGGTGTAGGATTCGGTTT+TGG | 0.362816 | 3_2:-86226074 | None:intergenic |
| TCTCACCGCCATGGCTGTTC+CGG | 0.362983 | 3_2:+86226459 | Msa0433690:CDS |
| GATAGAGCTGTCAAGGCAAT+TGG | 0.370145 | 3_2:+86227308 | Msa0433690:CDS |
| TTGTGGAAGAGCTTTCTCTT+GGG | 0.371995 | 3_2:+86227106 | Msa0433690:CDS |
| ATGATGCTTTGTGTGTTGTT+AGG | 0.372583 | 3_2:+86227238 | Msa0433690:CDS |
| TTTGTTATCGGTGTAGGATT+CGG | 0.375261 | 3_2:-86226080 | None:intergenic |
| CATACCTTTGGGGCCGAGAC+TGG | 0.392090 | 3_2:-86226167 | None:intergenic |
| AATCTTAGCATTCTCCATTC+TGG | 0.394765 | 3_2:-86226740 | None:intergenic |
| GGAGGATCGGTGAGGGGCTG+CGG | 0.401126 | 3_2:-86226053 | None:intergenic |
| GTCAAGGCAATTGGGTGCTT+GGG | 0.415529 | 3_2:+86227317 | Msa0433690:CDS |
| CGATCCCGCTAGGCCGGAAA+TGG | 0.417675 | 3_2:+86226603 | Msa0433690:CDS |
| AGAACTGAATCAACAGCAAT+AGG | 0.421556 | 3_2:-86226571 | None:intergenic |
| AGCTCAGTAACAATTGCAAT+CGG | 0.423035 | 3_2:-86227438 | None:intergenic |
| TTTGTGTGTTGTTAGGTGTT+TGG | 0.427682 | 3_2:+86227245 | Msa0433690:CDS |
| AAATGCTCAATATTAGCAAT+AGG | 0.434996 | 3_2:-86227054 | None:intergenic |
| ATTTCTGGTATTAAGGATAT+GGG | 0.441434 | 3_2:+86227147 | Msa0433690:CDS |
| TTTGCGTTTGTTATCGGTGT+AGG | 0.444094 | 3_2:-86226086 | None:intergenic |
| TAGCACTTCGTTGAATAGTA+AGG | 0.456781 | 3_2:+86226519 | Msa0433690:CDS |
| TCACGATCAGTGAGTTCAAC+CGG | 0.461390 | 3_2:-86226478 | None:intergenic |
| AACGCCGTTCGCACCAGTCT+CGG | 0.462746 | 3_2:+86226154 | Msa0433690:CDS |
| ACCACAACTGTGCTTGTTCG+TGG | 0.463002 | 3_2:+86227174 | Msa0433690:CDS |
| TACTGAGCTTGTGAAGGGCT+TGG | 0.463815 | 3_2:+86226678 | Msa0433690:CDS |
| GTGATTATTCTCAGATGGAT+AGG | 0.464278 | 3_2:+86226824 | Msa0433690:CDS |
| CAAGACTCCGCTGCTGGTGA+TGG | 0.468281 | 3_2:+86226310 | Msa0433690:CDS |
| ATTAAGAAGATTAAGGCAAC+CGG | 0.476085 | 3_2:+86226883 | Msa0433690:CDS |
| GAATGTGGTGCAGCCATTGC+TGG | 0.481414 | 3_2:+86227539 | Msa0433690:CDS |
| GAAGAGCTTTCTCTTGGGGA+TGG | 0.486289 | 3_2:+86227111 | Msa0433690:CDS |
| TCCACCATTTCCGGCCTAGC+GGG | 0.488011 | 3_2:-86226607 | None:intergenic |
| GCAATTGGGTGCTTGGGCTA+AGG | 0.488468 | 3_2:+86227323 | Msa0433690:CDS |
| AGGCAAACAATTAAGAGTCT+TGG | 0.489277 | 3_2:-86227034 | None:intergenic |
| TGTCTCCTCCTTCTCTCTCA+TGG | 0.491398 | 3_2:+86226376 | Msa0433690:CDS |
| TGTGGAAGAGCTTTCTCTTG+GGG | 0.491536 | 3_2:+86227107 | Msa0433690:CDS |
| TATACCCTTGCTGAGAATGC+AGG | 0.493053 | 3_2:+86227408 | Msa0433690:CDS |
| CAGTCTCGGCCCCAAAGGTA+TGG | 0.493521 | 3_2:+86226168 | Msa0433690:CDS |
| AATCAACAACACATTACAAC+CGG | 0.494792 | 3_2:-86226902 | None:intergenic |
| CTGAGGAATCGTCATGCTAA+AGG | 0.500255 | 3_2:+86227459 | Msa0433690:CDS |
| AACGGCGTTAGCGACGGAAC+GGG | 0.500736 | 3_2:-86226140 | None:intergenic |
| TGTCATCGATCCCGCTAGGC+CGG | 0.501041 | 3_2:+86226597 | Msa0433690:CDS |
| TCAACACTGGAATCAATGTC+AGG | 0.507995 | 3_2:+86227487 | Msa0433690:CDS |
| AAATCTCAAGACTCCGCTGC+TGG | 0.512750 | 3_2:+86226304 | Msa0433690:CDS |
| ATAGAGCTGTCAAGGCAATT+GGG | 0.513984 | 3_2:+86227309 | Msa0433690:CDS |
| GATTGCAGGTGGTGGTGCTC+CGG | 0.514051 | 3_2:+86227284 | Msa0433690:CDS |
| TGCCTTGACAGCTCTATCTC+CGG | 0.516484 | 3_2:-86227303 | None:intergenic |
| GTTGGTGATGATAACTTCGT+TGG | 0.525584 | 3_2:-86226212 | None:intergenic |
| GGAACGGGCGGCGATGATGT+TGG | 0.529719 | 3_2:-86226125 | None:intergenic |
| TCCCGCTAGGCCGGAAATGG+TGG | 0.531201 | 3_2:+86226606 | Msa0433690:CDS |
| AAGAGCTTTCTCTTGGGGAT+GGG | 0.531234 | 3_2:+86227112 | Msa0433690:CDS |
| AACTTGCATCTTGTTGAGGA+TGG | 0.540091 | 3_2:-86226245 | None:intergenic |
| GGTTAGTGATTATTCTCAGA+TGG | 0.543811 | 3_2:+86226819 | Msa0433690:CDS |
| TCAGATTTCACCTCCTAAGA+CGG | 0.551329 | 3_2:+86226777 | Msa0433690:CDS |
| ACATTTCTCGAGAAGTGCTC+CGG | 0.552049 | 3_2:-86226356 | None:intergenic |
| CTGTATTCGTGCATTTGCTG+AGG | 0.558420 | 3_2:+86227368 | Msa0433690:CDS |
| GATGAATACCATGAGAGAGA+AGG | 0.558756 | 3_2:-86226384 | None:intergenic |
| CGGCGATGATGTTGGATTGA+CGG | 0.559941 | 3_2:-86226117 | None:intergenic |
| GATGATAACTTCGTTGGAAG+AGG | 0.560445 | 3_2:-86226206 | None:intergenic |
| GAATACCATGAGAGAGAAGG+AGG | 0.561831 | 3_2:-86226381 | None:intergenic |
| CTCCGGAGATAGAGCTGTCA+AGG | 0.563162 | 3_2:+86227301 | Msa0433690:CDS |
| GAACGGCGTTAGCGACGGAA+CGG | 0.564350 | 3_2:-86226141 | None:intergenic |
| GGGGCCGAGACTGGTGCGAA+CGG | 0.565754 | 3_2:-86226158 | None:intergenic |
| AAGGTTAGTCATGCTGCTGG+TGG | 0.570337 | 3_2:+86226712 | Msa0433690:CDS |
| GGCGATGACAACAACGGTGG+TGG | 0.571260 | 3_2:-86226335 | None:intergenic |
| CGCACCAGTCTCGGCCCCAA+AGG | 0.572245 | 3_2:+86226163 | Msa0433690:CDS |
| CCTCACACACTCTGTTGCCA+AGG | 0.573445 | 3_2:-86227580 | None:intergenic |
| GCTCAGTAACAATTGCAATC+GGG | 0.575791 | 3_2:-86227437 | None:intergenic |
| TCTCTGTCATCGATCCCGCT+AGG | 0.576821 | 3_2:+86226593 | Msa0433690:CDS |
| ACCACCGTTGTTGTCATCGC+CGG | 0.577312 | 3_2:+86226337 | Msa0433690:CDS |
| GAAGAACTTGCATCTTGTTG+AGG | 0.580248 | 3_2:-86226249 | None:intergenic |
| GGCGTTAGCGACGGAACGGG+CGG | 0.589560 | 3_2:-86226137 | None:intergenic |
| GTTGGGTTATGCTGATCTTG+TGG | 0.590393 | 3_2:+86227089 | Msa0433690:CDS |
| GGTGGTTCCATCACCAGCAG+CGG | 0.591723 | 3_2:-86226317 | None:intergenic |
| GCACTTGTGCTAACCAGCAA+TGG | 0.592202 | 3_2:-86227552 | None:intergenic |
| TCAAACCTGCATTCTCAGCA+AGG | 0.593910 | 3_2:-86227413 | None:intergenic |
| GAGTTCAACCGGAACAGCCA+TGG | 0.594130 | 3_2:-86226467 | None:intergenic |
| GGTGCGAACGGCGTTAGCGA+CGG | 0.594895 | 3_2:-86226146 | None:intergenic |
| TGATGATACTGAGCTTGTGA+AGG | 0.595971 | 3_2:+86226672 | Msa0433690:CDS |
| TTAGCATTCTCCATTCTGGT+AGG | 0.596904 | 3_2:-86226736 | None:intergenic |
| ACACTCTGTTGCCAAGGTGA+TGG | 0.598855 | 3_2:-86227574 | None:intergenic |
| TGCTGGTGGACCTACCAGAA+TGG | 0.600235 | 3_2:+86226726 | Msa0433690:CDS |
| GCTAAAGGTGAGATCAACAC+TGG | 0.604820 | 3_2:+86227474 | Msa0433690:CDS |
| GAGGATGGTAGCGCCGTCGT+TGG | 0.607730 | 3_2:-86226230 | None:intergenic |
| GATGATACTGAGCTTGTGAA+GGG | 0.610892 | 3_2:+86226673 | Msa0433690:CDS |
| TGTTCTATATCCGTCTTAGG+AGG | 0.611514 | 3_2:-86226787 | None:intergenic |
| TTGCAATTGTTACTGAGCTG+AGG | 0.612866 | 3_2:+86227442 | Msa0433690:CDS |
| TCCACGAACAAGCACAGTTG+TGG | 0.612984 | 3_2:-86227175 | None:intergenic |
| GCTGCACCACATTCTCCTCA+AGG | 0.613760 | 3_2:-86227530 | None:intergenic |
| TAGCACAAGTGCCATCACCT+TGG | 0.618089 | 3_2:+86227563 | Msa0433690:CDS |
| TCAAATTACAAACATCCTTG+AGG | 0.621720 | 3_2:+86227515 | Msa0433690:CDS |
| AAGAAGGTTAGTCATGCTGC+TGG | 0.624743 | 3_2:+86226709 | Msa0433690:CDS |
| ACTGGAATCAATGTCAGGAA+AGG | 0.625427 | 3_2:+86227492 | Msa0433690:CDS |
| AGTGAATCAGAGATAACAGT+AGG | 0.627838 | 3_2:-86226406 | None:intergenic |
| AAACATCCTTGAGGAGAATG+TGG | 0.628033 | 3_2:+86227524 | Msa0433690:CDS |
| TCTTAACAATCTTCACATCA+CGG | 0.628490 | 3_2:-86226633 | None:intergenic |
| TGTTGATGTTCTCACCGCCA+TGG | 0.628840 | 3_2:+86226450 | Msa0433690:CDS |
| AACATCAACAGCTTTAACAG+AGG | 0.629483 | 3_2:-86226437 | None:intergenic |
| GTGAAGATTGTTAAGAAGCT+CGG | 0.630785 | 3_2:+86226640 | Msa0433690:CDS |
| TTAGGTGTTTGGTTGCCAAG+AGG | 0.631658 | 3_2:+86227256 | Msa0433690:CDS |
| ATCCACCATTTCCGGCCTAG+CGG | 0.644279 | 3_2:-86226608 | None:intergenic |
| CCTTGGCAACAGAGTGTGTG+AGG | 0.652881 | 3_2:+86227580 | Msa0433690:CDS |
| CAAACCTGCATTCTCAGCAA+GGG | 0.653006 | 3_2:-86227412 | None:intergenic |
| GGATATAGAACAGAGTATTG+TGG | 0.674097 | 3_2:+86226798 | Msa0433690:CDS |
| GAAGTTATCATCACCAACGA+CGG | 0.680075 | 3_2:+86226217 | Msa0433690:CDS |
| TTCAACCGGAACAGCCATGG+CGG | 0.690129 | 3_2:-86226464 | None:intergenic |
| AAGATTGTTAAGAAGCTCGG+TGG | 0.695277 | 3_2:+86226643 | Msa0433690:CDS |
| TGCTCCGGCGATGACAACAA+CGG | 0.714797 | 3_2:-86226341 | None:intergenic |
| TCCGGCGATGACAACAACGG+TGG | 0.732056 | 3_2:-86226338 | None:intergenic |
| TTGATGATATTGTAACTGTG+AGG | 0.759737 | 3_2:+86227616 | Msa0433690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAATGCTCAATATTAGCAAT+AGG | - | chr3_2:86227057-86227076 | None:intergenic | 25.0% |
| !!! | ATTTCTGGTATTAAGGATAT+GGG | + | chr3_2:86227147-86227166 | Msa0433690:CDS | 25.0% |
| ! | AAATGCTCAATATTAGCAAT+AGG | - | chr3_2:86227057-86227076 | None:intergenic | 25.0% |
| !!! | ATTTCTGGTATTAAGGATAT+GGG | + | chr3_2:86227147-86227166 | Msa0433690:CDS | 25.0% |
| ! | ATCATTTTGTCCATACCTTT+GGG | - | chr3_2:86226181-86226200 | None:intergenic | 30.0% |
| TCTTAACAATCTTCACATCA+CGG | - | chr3_2:86226636-86226655 | None:intergenic | 30.0% | |
| ! | AAGAGAGGAGTTACATTTTA+GGG | + | chr3_2:86226857-86226876 | Msa0433690:CDS | 30.0% |
| AGGGATGATTAAGAAGATTA+AGG | + | chr3_2:86226876-86226895 | Msa0433690:CDS | 30.0% | |
| ATTAAGAAGATTAAGGCAAC+CGG | + | chr3_2:86226883-86226902 | Msa0433690:CDS | 30.0% | |
| AATCAACAACACATTACAAC+CGG | - | chr3_2:86226905-86226924 | None:intergenic | 30.0% | |
| ! | TCTTGCTAAAGCTAAGATTT+TGG | + | chr3_2:86226972-86226991 | Msa0433690:CDS | 30.0% |
| !! | TGTGAAGATTTCTGGTATTA+AGG | + | chr3_2:86227140-86227159 | Msa0433690:CDS | 30.0% |
| !! | GATTTCTGGTATTAAGGATA+TGG | + | chr3_2:86227146-86227165 | Msa0433690:CDS | 30.0% |
| TCAAATTACAAACATCCTTG+AGG | + | chr3_2:86227515-86227534 | Msa0433690:CDS | 30.0% | |
| ! | TTGATGATATTGTAACTGTG+AGG | + | chr3_2:86227616-86227635 | Msa0433690:CDS | 30.0% |
| ! | ATCATTTTGTCCATACCTTT+GGG | - | chr3_2:86226181-86226200 | None:intergenic | 30.0% |
| TCTTAACAATCTTCACATCA+CGG | - | chr3_2:86226636-86226655 | None:intergenic | 30.0% | |
| ! | AAGAGAGGAGTTACATTTTA+GGG | + | chr3_2:86226857-86226876 | Msa0433690:CDS | 30.0% |
| AGGGATGATTAAGAAGATTA+AGG | + | chr3_2:86226876-86226895 | Msa0433690:CDS | 30.0% | |
| ATTAAGAAGATTAAGGCAAC+CGG | + | chr3_2:86226883-86226902 | Msa0433690:CDS | 30.0% | |
| AATCAACAACACATTACAAC+CGG | - | chr3_2:86226905-86226924 | None:intergenic | 30.0% | |
| ! | TCTTGCTAAAGCTAAGATTT+TGG | + | chr3_2:86226972-86226991 | Msa0433690:CDS | 30.0% |
| !! | TGTGAAGATTTCTGGTATTA+AGG | + | chr3_2:86227140-86227159 | Msa0433690:CDS | 30.0% |
| !! | GATTTCTGGTATTAAGGATA+TGG | + | chr3_2:86227146-86227165 | Msa0433690:CDS | 30.0% |
| TCAAATTACAAACATCCTTG+AGG | + | chr3_2:86227515-86227534 | Msa0433690:CDS | 30.0% | |
| ! | TTGATGATATTGTAACTGTG+AGG | + | chr3_2:86227616-86227635 | Msa0433690:CDS | 30.0% |
| ! | TTTGTTATCGGTGTAGGATT+CGG | - | chr3_2:86226083-86226102 | None:intergenic | 35.0% |
| !! | ATCGTCTTTGCGTTTGTTAT+CGG | - | chr3_2:86226095-86226114 | None:intergenic | 35.0% |
| ! | TCATTTTGTCCATACCTTTG+GGG | - | chr3_2:86226180-86226199 | None:intergenic | 35.0% |
| ! | GATCATTTTGTCCATACCTT+TGG | - | chr3_2:86226182-86226201 | None:intergenic | 35.0% |
| AGTGAATCAGAGATAACAGT+AGG | - | chr3_2:86226409-86226428 | None:intergenic | 35.0% | |
| ! | AACATCAACAGCTTTAACAG+AGG | - | chr3_2:86226440-86226459 | None:intergenic | 35.0% |
| TAGCACTTCGTTGAATAGTA+AGG | + | chr3_2:86226519-86226538 | Msa0433690:CDS | 35.0% | |
| AGAACTGAATCAACAGCAAT+AGG | - | chr3_2:86226574-86226593 | None:intergenic | 35.0% | |
| GTGAAGATTGTTAAGAAGCT+CGG | + | chr3_2:86226640-86226659 | Msa0433690:CDS | 35.0% | |
| AATCTTAGCATTCTCCATTC+TGG | - | chr3_2:86226743-86226762 | None:intergenic | 35.0% | |
| !! | GGATATAGAACAGAGTATTG+TGG | + | chr3_2:86226798-86226817 | Msa0433690:CDS | 35.0% |
| GGTTAGTGATTATTCTCAGA+TGG | + | chr3_2:86226819-86226838 | Msa0433690:CDS | 35.0% | |
| GTGATTATTCTCAGATGGAT+AGG | + | chr3_2:86226824-86226843 | Msa0433690:CDS | 35.0% | |
| ! | TCAGATGGATAGGATTTTGA+AGG | + | chr3_2:86226834-86226853 | Msa0433690:CDS | 35.0% |
| !! | ATAGGATTTTGAAGGAAGAG+AGG | + | chr3_2:86226842-86226861 | Msa0433690:CDS | 35.0% |
| ! | GAAGAGAGGAGTTACATTTT+AGG | + | chr3_2:86226856-86226875 | Msa0433690:CDS | 35.0% |
| AGGCAAACAATTAAGAGTCT+TGG | - | chr3_2:86227037-86227056 | None:intergenic | 35.0% | |
| ! | ATGATGCTTTGTGTGTTGTT+AGG | + | chr3_2:86227238-86227257 | Msa0433690:CDS | 35.0% |
| ! | TTTGTGTGTTGTTAGGTGTT+TGG | + | chr3_2:86227245-86227264 | Msa0433690:CDS | 35.0% |
| AGCTCAGTAACAATTGCAAT+CGG | - | chr3_2:86227441-86227460 | None:intergenic | 35.0% | |
| ! | TTTGTTATCGGTGTAGGATT+CGG | - | chr3_2:86226083-86226102 | None:intergenic | 35.0% |
| !! | ATCGTCTTTGCGTTTGTTAT+CGG | - | chr3_2:86226095-86226114 | None:intergenic | 35.0% |
| ! | TCATTTTGTCCATACCTTTG+GGG | - | chr3_2:86226180-86226199 | None:intergenic | 35.0% |
| ! | GATCATTTTGTCCATACCTT+TGG | - | chr3_2:86226182-86226201 | None:intergenic | 35.0% |
| AGTGAATCAGAGATAACAGT+AGG | - | chr3_2:86226409-86226428 | None:intergenic | 35.0% | |
| ! | AACATCAACAGCTTTAACAG+AGG | - | chr3_2:86226440-86226459 | None:intergenic | 35.0% |
| TAGCACTTCGTTGAATAGTA+AGG | + | chr3_2:86226519-86226538 | Msa0433690:CDS | 35.0% | |
| AGAACTGAATCAACAGCAAT+AGG | - | chr3_2:86226574-86226593 | None:intergenic | 35.0% | |
| GTGAAGATTGTTAAGAAGCT+CGG | + | chr3_2:86226640-86226659 | Msa0433690:CDS | 35.0% | |
| AATCTTAGCATTCTCCATTC+TGG | - | chr3_2:86226743-86226762 | None:intergenic | 35.0% | |
| !! | GGATATAGAACAGAGTATTG+TGG | + | chr3_2:86226798-86226817 | Msa0433690:CDS | 35.0% |
| GGTTAGTGATTATTCTCAGA+TGG | + | chr3_2:86226819-86226838 | Msa0433690:CDS | 35.0% | |
| GTGATTATTCTCAGATGGAT+AGG | + | chr3_2:86226824-86226843 | Msa0433690:CDS | 35.0% | |
| ! | TCAGATGGATAGGATTTTGA+AGG | + | chr3_2:86226834-86226853 | Msa0433690:CDS | 35.0% |
| !! | ATAGGATTTTGAAGGAAGAG+AGG | + | chr3_2:86226842-86226861 | Msa0433690:CDS | 35.0% |
| ! | GAAGAGAGGAGTTACATTTT+AGG | + | chr3_2:86226856-86226875 | Msa0433690:CDS | 35.0% |
| AGGCAAACAATTAAGAGTCT+TGG | - | chr3_2:86227037-86227056 | None:intergenic | 35.0% | |
| ! | ATGATGCTTTGTGTGTTGTT+AGG | + | chr3_2:86227238-86227257 | Msa0433690:CDS | 35.0% |
| ! | TTTGTGTGTTGTTAGGTGTT+TGG | + | chr3_2:86227245-86227264 | Msa0433690:CDS | 35.0% |
| AGCTCAGTAACAATTGCAAT+CGG | - | chr3_2:86227441-86227460 | None:intergenic | 35.0% | |
| !! | TTTGCGTTTGTTATCGGTGT+AGG | - | chr3_2:86226089-86226108 | None:intergenic | 40.0% |
| GATGATAACTTCGTTGGAAG+AGG | - | chr3_2:86226209-86226228 | None:intergenic | 40.0% | |
| !! | GTTGGTGATGATAACTTCGT+TGG | - | chr3_2:86226215-86226234 | None:intergenic | 40.0% |
| GAAGTTATCATCACCAACGA+CGG | + | chr3_2:86226217-86226236 | Msa0433690:CDS | 40.0% | |
| AACTTGCATCTTGTTGAGGA+TGG | - | chr3_2:86226248-86226267 | None:intergenic | 40.0% | |
| GAAGAACTTGCATCTTGTTG+AGG | - | chr3_2:86226252-86226271 | None:intergenic | 40.0% | |
| ! | GAGTTCAACGAGCATTTTAG+CGG | - | chr3_2:86226281-86226300 | None:intergenic | 40.0% |
| GATGAATACCATGAGAGAGA+AGG | - | chr3_2:86226387-86226406 | None:intergenic | 40.0% | |
| AAGATTGTTAAGAAGCTCGG+TGG | + | chr3_2:86226643-86226662 | Msa0433690:CDS | 40.0% | |
| TGATGATACTGAGCTTGTGA+AGG | + | chr3_2:86226672-86226691 | Msa0433690:CDS | 40.0% | |
| GATGATACTGAGCTTGTGAA+GGG | + | chr3_2:86226673-86226692 | Msa0433690:CDS | 40.0% | |
| !! | GGGCTTGGTTTTTGATAAGA+AGG | + | chr3_2:86226693-86226712 | Msa0433690:CDS | 40.0% |
| TTAGCATTCTCCATTCTGGT+AGG | - | chr3_2:86226739-86226758 | None:intergenic | 40.0% | |
| TCAGATTTCACCTCCTAAGA+CGG | + | chr3_2:86226777-86226796 | Msa0433690:CDS | 40.0% | |
| TGTTCTATATCCGTCTTAGG+AGG | - | chr3_2:86226790-86226809 | None:intergenic | 40.0% | |
| CTCTGTTCTATATCCGTCTT+AGG | - | chr3_2:86226793-86226812 | None:intergenic | 40.0% | |
| ! | CATTTTCGTGCTGAGAAGTT+GGG | + | chr3_2:86227072-86227091 | Msa0433690:CDS | 40.0% |
| TTGTGGAAGAGCTTTCTCTT+GGG | + | chr3_2:86227106-86227125 | Msa0433690:CDS | 40.0% | |
| GGGAAGATTGTGAAGATTTC+TGG | + | chr3_2:86227132-86227151 | Msa0433690:CDS | 40.0% | |
| ACCTGCAATCAAAAACCTCT+TGG | - | chr3_2:86227274-86227293 | None:intergenic | 40.0% | |
| !! | AAGAGGTTTTTGATTGCAGG+TGG | + | chr3_2:86227273-86227292 | Msa0433690:CDS | 40.0% |
| ATAGAGCTGTCAAGGCAATT+GGG | + | chr3_2:86227309-86227328 | Msa0433690:CDS | 40.0% | |
| GCTCAGTAACAATTGCAATC+GGG | - | chr3_2:86227440-86227459 | None:intergenic | 40.0% | |
| TTGCAATTGTTACTGAGCTG+AGG | + | chr3_2:86227442-86227461 | Msa0433690:CDS | 40.0% | |
| TCAACACTGGAATCAATGTC+AGG | + | chr3_2:86227487-86227506 | Msa0433690:CDS | 40.0% | |
| ACTGGAATCAATGTCAGGAA+AGG | + | chr3_2:86227492-86227511 | Msa0433690:CDS | 40.0% | |
| AAACATCCTTGAGGAGAATG+TGG | + | chr3_2:86227524-86227543 | Msa0433690:CDS | 40.0% | |
| !! | TTTGCGTTTGTTATCGGTGT+AGG | - | chr3_2:86226089-86226108 | None:intergenic | 40.0% |
| GATGATAACTTCGTTGGAAG+AGG | - | chr3_2:86226209-86226228 | None:intergenic | 40.0% | |
| !! | GTTGGTGATGATAACTTCGT+TGG | - | chr3_2:86226215-86226234 | None:intergenic | 40.0% |
| GAAGTTATCATCACCAACGA+CGG | + | chr3_2:86226217-86226236 | Msa0433690:CDS | 40.0% | |
| AACTTGCATCTTGTTGAGGA+TGG | - | chr3_2:86226248-86226267 | None:intergenic | 40.0% | |
| GAAGAACTTGCATCTTGTTG+AGG | - | chr3_2:86226252-86226271 | None:intergenic | 40.0% | |
| ! | GAGTTCAACGAGCATTTTAG+CGG | - | chr3_2:86226281-86226300 | None:intergenic | 40.0% |
| GATGAATACCATGAGAGAGA+AGG | - | chr3_2:86226387-86226406 | None:intergenic | 40.0% | |
| AAGATTGTTAAGAAGCTCGG+TGG | + | chr3_2:86226643-86226662 | Msa0433690:CDS | 40.0% | |
| TGATGATACTGAGCTTGTGA+AGG | + | chr3_2:86226672-86226691 | Msa0433690:CDS | 40.0% | |
| GATGATACTGAGCTTGTGAA+GGG | + | chr3_2:86226673-86226692 | Msa0433690:CDS | 40.0% | |
| !! | GGGCTTGGTTTTTGATAAGA+AGG | + | chr3_2:86226693-86226712 | Msa0433690:CDS | 40.0% |
| TTAGCATTCTCCATTCTGGT+AGG | - | chr3_2:86226739-86226758 | None:intergenic | 40.0% | |
| TCAGATTTCACCTCCTAAGA+CGG | + | chr3_2:86226777-86226796 | Msa0433690:CDS | 40.0% | |
| TGTTCTATATCCGTCTTAGG+AGG | - | chr3_2:86226790-86226809 | None:intergenic | 40.0% | |
| CTCTGTTCTATATCCGTCTT+AGG | - | chr3_2:86226793-86226812 | None:intergenic | 40.0% | |
| ! | CATTTTCGTGCTGAGAAGTT+GGG | + | chr3_2:86227072-86227091 | Msa0433690:CDS | 40.0% |
| TTGTGGAAGAGCTTTCTCTT+GGG | + | chr3_2:86227106-86227125 | Msa0433690:CDS | 40.0% | |
| GGGAAGATTGTGAAGATTTC+TGG | + | chr3_2:86227132-86227151 | Msa0433690:CDS | 40.0% | |
| ACCTGCAATCAAAAACCTCT+TGG | - | chr3_2:86227274-86227293 | None:intergenic | 40.0% | |
| !! | AAGAGGTTTTTGATTGCAGG+TGG | + | chr3_2:86227273-86227292 | Msa0433690:CDS | 40.0% |
| ATAGAGCTGTCAAGGCAATT+GGG | + | chr3_2:86227309-86227328 | Msa0433690:CDS | 40.0% | |
| GCTCAGTAACAATTGCAATC+GGG | - | chr3_2:86227440-86227459 | None:intergenic | 40.0% | |
| TTGCAATTGTTACTGAGCTG+AGG | + | chr3_2:86227442-86227461 | Msa0433690:CDS | 40.0% | |
| TCAACACTGGAATCAATGTC+AGG | + | chr3_2:86227487-86227506 | Msa0433690:CDS | 40.0% | |
| ACTGGAATCAATGTCAGGAA+AGG | + | chr3_2:86227492-86227511 | Msa0433690:CDS | 40.0% | |
| AAACATCCTTGAGGAGAATG+TGG | + | chr3_2:86227524-86227543 | Msa0433690:CDS | 40.0% | |
| !!! | AGGATTCGGTTTTGGAGGAT+CGG | - | chr3_2:86226069-86226088 | None:intergenic | 45.0% |
| !! | ATCGGTGTAGGATTCGGTTT+TGG | - | chr3_2:86226077-86226096 | None:intergenic | 45.0% |
| !! | TTCAACGAGCATTTTAGCGG+CGG | - | chr3_2:86226278-86226297 | None:intergenic | 45.0% |
| !! | ACATTTCTCGAGAAGTGCTC+CGG | - | chr3_2:86226359-86226378 | None:intergenic | 45.0% |
| GAATACCATGAGAGAGAAGG+AGG | - | chr3_2:86226384-86226403 | None:intergenic | 45.0% | |
| TCACGATCAGTGAGTTCAAC+CGG | - | chr3_2:86226481-86226500 | None:intergenic | 45.0% | |
| ! | AAGAAGGTTAGTCATGCTGC+TGG | + | chr3_2:86226709-86226728 | Msa0433690:CDS | 45.0% |
| ! | GCATTTTCGTGCTGAGAAGT+TGG | + | chr3_2:86227071-86227090 | Msa0433690:CDS | 45.0% |
| GTTGGGTTATGCTGATCTTG+TGG | + | chr3_2:86227089-86227108 | Msa0433690:CDS | 45.0% | |
| CTTGTGGAAGAGCTTTCTCT+TGG | + | chr3_2:86227105-86227124 | Msa0433690:CDS | 45.0% | |
| TGTGGAAGAGCTTTCTCTTG+GGG | + | chr3_2:86227107-86227126 | Msa0433690:CDS | 45.0% | |
| AAGAGCTTTCTCTTGGGGAT+GGG | + | chr3_2:86227112-86227131 | Msa0433690:CDS | 45.0% | |
| TTAGGTGTTTGGTTGCCAAG+AGG | + | chr3_2:86227256-86227275 | Msa0433690:CDS | 45.0% | |
| !! | GCCAAGAGGTTTTTGATTGC+AGG | + | chr3_2:86227270-86227289 | Msa0433690:CDS | 45.0% |
| !! | AGGTTTTTGATTGCAGGTGG+TGG | + | chr3_2:86227276-86227295 | Msa0433690:CDS | 45.0% |
| GATAGAGCTGTCAAGGCAAT+TGG | + | chr3_2:86227308-86227327 | Msa0433690:CDS | 45.0% | |
| ! | CTTGGGCTAAGGTTTTGCAT+GGG | + | chr3_2:86227334-86227353 | Msa0433690:CDS | 45.0% |
| ! | TAAGGTTTTGCATGGGATGG+AGG | + | chr3_2:86227341-86227360 | Msa0433690:CDS | 45.0% |
| ! | AAGGTTTTGCATGGGATGGA+GGG | + | chr3_2:86227342-86227361 | Msa0433690:CDS | 45.0% |
| ! | CTGTATTCGTGCATTTGCTG+AGG | + | chr3_2:86227368-86227387 | Msa0433690:CDS | 45.0% |
| ! | GCATTCTCAGCAAGGGTATA+TGG | - | chr3_2:86227408-86227427 | None:intergenic | 45.0% |
| TATACCCTTGCTGAGAATGC+AGG | + | chr3_2:86227408-86227427 | Msa0433690:CDS | 45.0% | |
| CAAACCTGCATTCTCAGCAA+GGG | - | chr3_2:86227415-86227434 | None:intergenic | 45.0% | |
| TCAAACCTGCATTCTCAGCA+AGG | - | chr3_2:86227416-86227435 | None:intergenic | 45.0% | |
| CTGAGGAATCGTCATGCTAA+AGG | + | chr3_2:86227459-86227478 | Msa0433690:CDS | 45.0% | |
| GCTAAAGGTGAGATCAACAC+TGG | + | chr3_2:86227474-86227493 | Msa0433690:CDS | 45.0% | |
| !!! | AGGATTCGGTTTTGGAGGAT+CGG | - | chr3_2:86226069-86226088 | None:intergenic | 45.0% |
| !! | ATCGGTGTAGGATTCGGTTT+TGG | - | chr3_2:86226077-86226096 | None:intergenic | 45.0% |
| !! | TTCAACGAGCATTTTAGCGG+CGG | - | chr3_2:86226278-86226297 | None:intergenic | 45.0% |
| !! | ACATTTCTCGAGAAGTGCTC+CGG | - | chr3_2:86226359-86226378 | None:intergenic | 45.0% |
| GAATACCATGAGAGAGAAGG+AGG | - | chr3_2:86226384-86226403 | None:intergenic | 45.0% | |
| TCACGATCAGTGAGTTCAAC+CGG | - | chr3_2:86226481-86226500 | None:intergenic | 45.0% | |
| ! | AAGAAGGTTAGTCATGCTGC+TGG | + | chr3_2:86226709-86226728 | Msa0433690:CDS | 45.0% |
| ! | GCATTTTCGTGCTGAGAAGT+TGG | + | chr3_2:86227071-86227090 | Msa0433690:CDS | 45.0% |
| GTTGGGTTATGCTGATCTTG+TGG | + | chr3_2:86227089-86227108 | Msa0433690:CDS | 45.0% | |
| CTTGTGGAAGAGCTTTCTCT+TGG | + | chr3_2:86227105-86227124 | Msa0433690:CDS | 45.0% | |
| TGTGGAAGAGCTTTCTCTTG+GGG | + | chr3_2:86227107-86227126 | Msa0433690:CDS | 45.0% | |
| AAGAGCTTTCTCTTGGGGAT+GGG | + | chr3_2:86227112-86227131 | Msa0433690:CDS | 45.0% | |
| TTAGGTGTTTGGTTGCCAAG+AGG | + | chr3_2:86227256-86227275 | Msa0433690:CDS | 45.0% | |
| !! | GCCAAGAGGTTTTTGATTGC+AGG | + | chr3_2:86227270-86227289 | Msa0433690:CDS | 45.0% |
| !! | AGGTTTTTGATTGCAGGTGG+TGG | + | chr3_2:86227276-86227295 | Msa0433690:CDS | 45.0% |
| GATAGAGCTGTCAAGGCAAT+TGG | + | chr3_2:86227308-86227327 | Msa0433690:CDS | 45.0% | |
| ! | CTTGGGCTAAGGTTTTGCAT+GGG | + | chr3_2:86227334-86227353 | Msa0433690:CDS | 45.0% |
| ! | TAAGGTTTTGCATGGGATGG+AGG | + | chr3_2:86227341-86227360 | Msa0433690:CDS | 45.0% |
| ! | AAGGTTTTGCATGGGATGGA+GGG | + | chr3_2:86227342-86227361 | Msa0433690:CDS | 45.0% |
| ! | CTGTATTCGTGCATTTGCTG+AGG | + | chr3_2:86227368-86227387 | Msa0433690:CDS | 45.0% |
| ! | GCATTCTCAGCAAGGGTATA+TGG | - | chr3_2:86227408-86227427 | None:intergenic | 45.0% |
| TATACCCTTGCTGAGAATGC+AGG | + | chr3_2:86227408-86227427 | Msa0433690:CDS | 45.0% | |
| CAAACCTGCATTCTCAGCAA+GGG | - | chr3_2:86227415-86227434 | None:intergenic | 45.0% | |
| TCAAACCTGCATTCTCAGCA+AGG | - | chr3_2:86227416-86227435 | None:intergenic | 45.0% | |
| CTGAGGAATCGTCATGCTAA+AGG | + | chr3_2:86227459-86227478 | Msa0433690:CDS | 45.0% | |
| GCTAAAGGTGAGATCAACAC+TGG | + | chr3_2:86227474-86227493 | Msa0433690:CDS | 45.0% | |
| !! | GGTGTAGGATTCGGTTTTGG+AGG | - | chr3_2:86226074-86226093 | None:intergenic | 50.0% |
| CGGCGATGATGTTGGATTGA+CGG | - | chr3_2:86226120-86226139 | None:intergenic | 50.0% | |
| !! | TCAACGAGCATTTTAGCGGC+GGG | - | chr3_2:86226277-86226296 | None:intergenic | 50.0% |
| AGCAGCGGAGTCTTGAGATT+TGG | - | chr3_2:86226305-86226324 | None:intergenic | 50.0% | |
| AAATCTCAAGACTCCGCTGC+TGG | + | chr3_2:86226304-86226323 | Msa0433690:CDS | 50.0% | |
| TGTCTCCTCCTTCTCTCTCA+TGG | + | chr3_2:86226376-86226395 | Msa0433690:CDS | 50.0% | |
| TGTTGATGTTCTCACCGCCA+TGG | + | chr3_2:86226450-86226469 | Msa0433690:CDS | 50.0% | |
| TCACGGAGATCCACCATTTC+CGG | - | chr3_2:86226619-86226638 | None:intergenic | 50.0% | |
| TACTGAGCTTGTGAAGGGCT+TGG | + | chr3_2:86226678-86226697 | Msa0433690:CDS | 50.0% | |
| ! | AAGGTTAGTCATGCTGCTGG+TGG | + | chr3_2:86226712-86226731 | Msa0433690:CDS | 50.0% |
| GAAGAGCTTTCTCTTGGGGA+TGG | + | chr3_2:86227111-86227130 | Msa0433690:CDS | 50.0% | |
| ACCACAACTGTGCTTGTTCG+TGG | + | chr3_2:86227174-86227193 | Msa0433690:CDS | 50.0% | |
| TCCACGAACAAGCACAGTTG+TGG | - | chr3_2:86227178-86227197 | None:intergenic | 50.0% | |
| TGCCTTGACAGCTCTATCTC+CGG | - | chr3_2:86227306-86227325 | None:intergenic | 50.0% | |
| TGTCAAGGCAATTGGGTGCT+TGG | + | chr3_2:86227316-86227335 | Msa0433690:CDS | 50.0% | |
| GTCAAGGCAATTGGGTGCTT+GGG | + | chr3_2:86227317-86227336 | Msa0433690:CDS | 50.0% | |
| ! | GCTTGGGCTAAGGTTTTGCA+TGG | + | chr3_2:86227333-86227352 | Msa0433690:CDS | 50.0% |
| ! | GGCTAAGGTTTTGCATGGGA+TGG | + | chr3_2:86227338-86227357 | Msa0433690:CDS | 50.0% |
| GCACTTGTGCTAACCAGCAA+TGG | - | chr3_2:86227555-86227574 | None:intergenic | 50.0% | |
| TAGCACAAGTGCCATCACCT+TGG | + | chr3_2:86227563-86227582 | Msa0433690:CDS | 50.0% | |
| ACACTCTGTTGCCAAGGTGA+TGG | - | chr3_2:86227577-86227596 | None:intergenic | 50.0% | |
| !! | GGTGTAGGATTCGGTTTTGG+AGG | - | chr3_2:86226074-86226093 | None:intergenic | 50.0% |
| CGGCGATGATGTTGGATTGA+CGG | - | chr3_2:86226120-86226139 | None:intergenic | 50.0% | |
| !! | TCAACGAGCATTTTAGCGGC+GGG | - | chr3_2:86226277-86226296 | None:intergenic | 50.0% |
| AGCAGCGGAGTCTTGAGATT+TGG | - | chr3_2:86226305-86226324 | None:intergenic | 50.0% | |
| AAATCTCAAGACTCCGCTGC+TGG | + | chr3_2:86226304-86226323 | Msa0433690:CDS | 50.0% | |
| TGTCTCCTCCTTCTCTCTCA+TGG | + | chr3_2:86226376-86226395 | Msa0433690:CDS | 50.0% | |
| TGTTGATGTTCTCACCGCCA+TGG | + | chr3_2:86226450-86226469 | Msa0433690:CDS | 50.0% | |
| TCACGGAGATCCACCATTTC+CGG | - | chr3_2:86226619-86226638 | None:intergenic | 50.0% | |
| TACTGAGCTTGTGAAGGGCT+TGG | + | chr3_2:86226678-86226697 | Msa0433690:CDS | 50.0% | |
| ! | AAGGTTAGTCATGCTGCTGG+TGG | + | chr3_2:86226712-86226731 | Msa0433690:CDS | 50.0% |
| GAAGAGCTTTCTCTTGGGGA+TGG | + | chr3_2:86227111-86227130 | Msa0433690:CDS | 50.0% | |
| ACCACAACTGTGCTTGTTCG+TGG | + | chr3_2:86227174-86227193 | Msa0433690:CDS | 50.0% | |
| TCCACGAACAAGCACAGTTG+TGG | - | chr3_2:86227178-86227197 | None:intergenic | 50.0% | |
| TGCCTTGACAGCTCTATCTC+CGG | - | chr3_2:86227306-86227325 | None:intergenic | 50.0% | |
| TGTCAAGGCAATTGGGTGCT+TGG | + | chr3_2:86227316-86227335 | Msa0433690:CDS | 50.0% | |
| GTCAAGGCAATTGGGTGCTT+GGG | + | chr3_2:86227317-86227336 | Msa0433690:CDS | 50.0% | |
| ! | GCTTGGGCTAAGGTTTTGCA+TGG | + | chr3_2:86227333-86227352 | Msa0433690:CDS | 50.0% |
| ! | GGCTAAGGTTTTGCATGGGA+TGG | + | chr3_2:86227338-86227357 | Msa0433690:CDS | 50.0% |
| GCACTTGTGCTAACCAGCAA+TGG | - | chr3_2:86227555-86227574 | None:intergenic | 50.0% | |
| TAGCACAAGTGCCATCACCT+TGG | + | chr3_2:86227563-86227582 | Msa0433690:CDS | 50.0% | |
| ACACTCTGTTGCCAAGGTGA+TGG | - | chr3_2:86227577-86227596 | None:intergenic | 50.0% | |
| !!! | GGTTTTGGAGGATCGGTGAG+GGG | - | chr3_2:86226062-86226081 | None:intergenic | 55.0% |
| !!! | CGGTTTTGGAGGATCGGTGA+GGG | - | chr3_2:86226063-86226082 | None:intergenic | 55.0% |
| !!! | TCGGTTTTGGAGGATCGGTG+AGG | - | chr3_2:86226064-86226083 | None:intergenic | 55.0% |
| ACCACCGTTGTTGTCATCGC+CGG | + | chr3_2:86226337-86226356 | Msa0433690:CDS | 55.0% | |
| TGCTCCGGCGATGACAACAA+CGG | - | chr3_2:86226344-86226363 | None:intergenic | 55.0% | |
| TTCAACCGGAACAGCCATGG+CGG | - | chr3_2:86226467-86226486 | None:intergenic | 55.0% | |
| GAGTTCAACCGGAACAGCCA+TGG | - | chr3_2:86226470-86226489 | None:intergenic | 55.0% | |
| TCTCTGTCATCGATCCCGCT+AGG | + | chr3_2:86226593-86226612 | Msa0433690:CDS | 55.0% | |
| ATCCACCATTTCCGGCCTAG+CGG | - | chr3_2:86226611-86226630 | None:intergenic | 55.0% | |
| ! | TGCTGGTGGACCTACCAGAA+TGG | + | chr3_2:86226726-86226745 | Msa0433690:CDS | 55.0% |
| CTCCGGAGATAGAGCTGTCA+AGG | + | chr3_2:86227301-86227320 | Msa0433690:CDS | 55.0% | |
| GCAATTGGGTGCTTGGGCTA+AGG | + | chr3_2:86227323-86227342 | Msa0433690:CDS | 55.0% | |
| GCTGCACCACATTCTCCTCA+AGG | - | chr3_2:86227533-86227552 | None:intergenic | 55.0% | |
| GAATGTGGTGCAGCCATTGC+TGG | + | chr3_2:86227539-86227558 | Msa0433690:CDS | 55.0% | |
| CCTCACACACTCTGTTGCCA+AGG | - | chr3_2:86227583-86227602 | None:intergenic | 55.0% | |
| CCTTGGCAACAGAGTGTGTG+AGG | + | chr3_2:86227580-86227599 | Msa0433690:CDS | 55.0% | |
| !!! | GGTTTTGGAGGATCGGTGAG+GGG | - | chr3_2:86226062-86226081 | None:intergenic | 55.0% |
| !!! | CGGTTTTGGAGGATCGGTGA+GGG | - | chr3_2:86226063-86226082 | None:intergenic | 55.0% |
| !!! | TCGGTTTTGGAGGATCGGTG+AGG | - | chr3_2:86226064-86226083 | None:intergenic | 55.0% |
| ACCACCGTTGTTGTCATCGC+CGG | + | chr3_2:86226337-86226356 | Msa0433690:CDS | 55.0% | |
| TGCTCCGGCGATGACAACAA+CGG | - | chr3_2:86226344-86226363 | None:intergenic | 55.0% | |
| TTCAACCGGAACAGCCATGG+CGG | - | chr3_2:86226467-86226486 | None:intergenic | 55.0% | |
| GAGTTCAACCGGAACAGCCA+TGG | - | chr3_2:86226470-86226489 | None:intergenic | 55.0% | |
| TCTCTGTCATCGATCCCGCT+AGG | + | chr3_2:86226593-86226612 | Msa0433690:CDS | 55.0% | |
| ATCCACCATTTCCGGCCTAG+CGG | - | chr3_2:86226611-86226630 | None:intergenic | 55.0% | |
| ! | TGCTGGTGGACCTACCAGAA+TGG | + | chr3_2:86226726-86226745 | Msa0433690:CDS | 55.0% |
| CTCCGGAGATAGAGCTGTCA+AGG | + | chr3_2:86227301-86227320 | Msa0433690:CDS | 55.0% | |
| GCAATTGGGTGCTTGGGCTA+AGG | + | chr3_2:86227323-86227342 | Msa0433690:CDS | 55.0% | |
| GCTGCACCACATTCTCCTCA+AGG | - | chr3_2:86227533-86227552 | None:intergenic | 55.0% | |
| GAATGTGGTGCAGCCATTGC+TGG | + | chr3_2:86227539-86227558 | Msa0433690:CDS | 55.0% | |
| CCTCACACACTCTGTTGCCA+AGG | - | chr3_2:86227583-86227602 | None:intergenic | 55.0% | |
| CCTTGGCAACAGAGTGTGTG+AGG | + | chr3_2:86227580-86227599 | Msa0433690:CDS | 55.0% | |
| AACGGCGTTAGCGACGGAAC+GGG | - | chr3_2:86226143-86226162 | None:intergenic | 60.0% | |
| GAACGGCGTTAGCGACGGAA+CGG | - | chr3_2:86226144-86226163 | None:intergenic | 60.0% | |
| AACGCCGTTCGCACCAGTCT+CGG | + | chr3_2:86226154-86226173 | Msa0433690:CDS | 60.0% | |
| !! | CATACCTTTGGGGCCGAGAC+TGG | - | chr3_2:86226170-86226189 | None:intergenic | 60.0% |
| CAGTCTCGGCCCCAAAGGTA+TGG | + | chr3_2:86226168-86226187 | Msa0433690:CDS | 60.0% | |
| CAAGACTCCGCTGCTGGTGA+TGG | + | chr3_2:86226310-86226329 | Msa0433690:CDS | 60.0% | |
| GGTGGTTCCATCACCAGCAG+CGG | - | chr3_2:86226320-86226339 | None:intergenic | 60.0% | |
| GGCGATGACAACAACGGTGG+TGG | - | chr3_2:86226338-86226357 | None:intergenic | 60.0% | |
| TCCGGCGATGACAACAACGG+TGG | - | chr3_2:86226341-86226360 | None:intergenic | 60.0% | |
| TCTCACCGCCATGGCTGTTC+CGG | + | chr3_2:86226459-86226478 | Msa0433690:CDS | 60.0% | |
| TGTCATCGATCCCGCTAGGC+CGG | + | chr3_2:86226597-86226616 | Msa0433690:CDS | 60.0% | |
| TCCACCATTTCCGGCCTAGC+GGG | - | chr3_2:86226610-86226629 | None:intergenic | 60.0% | |
| ! | GATTGCAGGTGGTGGTGCTC+CGG | + | chr3_2:86227284-86227303 | Msa0433690:CDS | 60.0% |
| AACGGCGTTAGCGACGGAAC+GGG | - | chr3_2:86226143-86226162 | None:intergenic | 60.0% | |
| GAACGGCGTTAGCGACGGAA+CGG | - | chr3_2:86226144-86226163 | None:intergenic | 60.0% | |
| AACGCCGTTCGCACCAGTCT+CGG | + | chr3_2:86226154-86226173 | Msa0433690:CDS | 60.0% | |
| !! | CATACCTTTGGGGCCGAGAC+TGG | - | chr3_2:86226170-86226189 | None:intergenic | 60.0% |
| CAGTCTCGGCCCCAAAGGTA+TGG | + | chr3_2:86226168-86226187 | Msa0433690:CDS | 60.0% | |
| CAAGACTCCGCTGCTGGTGA+TGG | + | chr3_2:86226310-86226329 | Msa0433690:CDS | 60.0% | |
| GGTGGTTCCATCACCAGCAG+CGG | - | chr3_2:86226320-86226339 | None:intergenic | 60.0% | |
| GGCGATGACAACAACGGTGG+TGG | - | chr3_2:86226338-86226357 | None:intergenic | 60.0% | |
| TCCGGCGATGACAACAACGG+TGG | - | chr3_2:86226341-86226360 | None:intergenic | 60.0% | |
| TCTCACCGCCATGGCTGTTC+CGG | + | chr3_2:86226459-86226478 | Msa0433690:CDS | 60.0% | |
| TGTCATCGATCCCGCTAGGC+CGG | + | chr3_2:86226597-86226616 | Msa0433690:CDS | 60.0% | |
| TCCACCATTTCCGGCCTAGC+GGG | - | chr3_2:86226610-86226629 | None:intergenic | 60.0% | |
| ! | GATTGCAGGTGGTGGTGCTC+CGG | + | chr3_2:86227284-86227303 | Msa0433690:CDS | 60.0% |
| GGAACGGGCGGCGATGATGT+TGG | - | chr3_2:86226128-86226147 | None:intergenic | 65.0% | |
| GGTGCGAACGGCGTTAGCGA+CGG | - | chr3_2:86226149-86226168 | None:intergenic | 65.0% | |
| ! | GAGGATGGTAGCGCCGTCGT+TGG | - | chr3_2:86226233-86226252 | None:intergenic | 65.0% |
| CGATCCCGCTAGGCCGGAAA+TGG | + | chr3_2:86226603-86226622 | Msa0433690:CDS | 65.0% | |
| TCCCGCTAGGCCGGAAATGG+TGG | + | chr3_2:86226606-86226625 | Msa0433690:CDS | 65.0% | |
| GGAACGGGCGGCGATGATGT+TGG | - | chr3_2:86226128-86226147 | None:intergenic | 65.0% | |
| GGTGCGAACGGCGTTAGCGA+CGG | - | chr3_2:86226149-86226168 | None:intergenic | 65.0% | |
| ! | GAGGATGGTAGCGCCGTCGT+TGG | - | chr3_2:86226233-86226252 | None:intergenic | 65.0% |
| CGATCCCGCTAGGCCGGAAA+TGG | + | chr3_2:86226603-86226622 | Msa0433690:CDS | 65.0% | |
| TCCCGCTAGGCCGGAAATGG+TGG | + | chr3_2:86226606-86226625 | Msa0433690:CDS | 65.0% | |
| GGAGGATCGGTGAGGGGCTG+CGG | - | chr3_2:86226056-86226075 | None:intergenic | 70.0% | |
| GGCGTTAGCGACGGAACGGG+CGG | - | chr3_2:86226140-86226159 | None:intergenic | 70.0% | |
| GGGGCCGAGACTGGTGCGAA+CGG | - | chr3_2:86226161-86226180 | None:intergenic | 70.0% | |
| CGCACCAGTCTCGGCCCCAA+AGG | + | chr3_2:86226163-86226182 | Msa0433690:CDS | 70.0% | |
| GGAGGATCGGTGAGGGGCTG+CGG | - | chr3_2:86226056-86226075 | None:intergenic | 70.0% | |
| GGCGTTAGCGACGGAACGGG+CGG | - | chr3_2:86226140-86226159 | None:intergenic | 70.0% | |
| GGGGCCGAGACTGGTGCGAA+CGG | - | chr3_2:86226161-86226180 | None:intergenic | 70.0% | |
| CGCACCAGTCTCGGCCCCAA+AGG | + | chr3_2:86226163-86226182 | Msa0433690:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 86226043 | 86227641 | 86226043 | ID=Msa0433690;Name=Msa0433690 |
| chr3_2 | mRNA | 86226043 | 86227641 | 86226043 | ID=Msa0433690-mRNA-1;Parent=Msa0433690;Name=Msa0433690-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|-1|0|1|-1|1|1|0|532 |
| chr3_2 | exon | 86226043 | 86227641 | 86226043 | ID=Msa0433690-mRNA-1:exon:24878;Parent=Msa0433690-mRNA-1 |
| chr3_2 | CDS | 86226043 | 86227641 | 86226043 | ID=Msa0433690-mRNA-1:cds;Parent=Msa0433690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
