Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433950 | RDX79523.1 | 62.349 | 332 | 79 | 6 | 381 | 667 | 20 | 350 | 1.45e-120 | 385 |
| Msa0433950 | RDX79523.1 | 65.156 | 706 | 143 | 12 | 60 | 664 | 1 | 704 | 0.0 | 839 |
| Msa0433950 | RDX79523.1 | 72.299 | 361 | 71 | 7 | 48 | 380 | 345 | 704 | 1.70e-159 | 486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433950 | A0A371FN64 | 62.349 | 332 | 79 | 6 | 381 | 667 | 20 | 350 | 6.95e-121 | 385 |
| Msa0433950 | A0A371FN64 | 65.156 | 706 | 143 | 12 | 60 | 664 | 1 | 704 | 0.0 | 839 |
| Msa0433950 | A0A371FN64 | 72.299 | 361 | 71 | 7 | 48 | 380 | 345 | 704 | 8.13e-160 | 486 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0387170 | Msa0433950 | 0.852432 | 4.633866e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433950 | MtrunA17_Chr3g0139921 | 81.075 | 428 | 37 | 5 | 2 | 386 | 1 | 427 | 0.0 | 656 |
| Msa0433950 | MtrunA17_Chr3g0139921 | 69.916 | 359 | 50 | 4 | 367 | 670 | 72 | 427 | 8.08e-165 | 479 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433950 | AT5G25770.1 | 56.983 | 358 | 110 | 5 | 66 | 383 | 5 | 358 | 1.15e-135 | 402 |
| Msa0433950 | AT5G25770.1 | 50.000 | 346 | 110 | 6 | 381 | 667 | 17 | 358 | 8.58e-103 | 318 |
| Msa0433950 | AT5G25770.2 | 56.983 | 358 | 110 | 5 | 66 | 383 | 63 | 416 | 4.36e-135 | 403 |
| Msa0433950 | AT5G25770.2 | 50.432 | 347 | 107 | 7 | 376 | 663 | 72 | 412 | 3.98e-102 | 318 |
| Msa0433950 | AT5G25770.3 | 56.983 | 358 | 110 | 5 | 66 | 383 | 66 | 419 | 6.11e-135 | 403 |
| Msa0433950 | AT5G25770.3 | 49.858 | 351 | 111 | 7 | 376 | 667 | 75 | 419 | 4.80e-102 | 318 |
Find 175 sgRNAs with CRISPR-Local
Find 535 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCATGAATTTCGTTATT+TGG | 0.194918 | 3_2:-86615844 | None:intergenic |
| CCACCCACCGTATCTTCTTC+TGG | 0.208011 | 3_2:+86607404 | Msa0433950:five_prime_UTR |
| AAGTTCACAATGACTTTCTT+TGG | 0.244495 | 3_2:-86612587 | None:intergenic |
| TGCTCCTCTGATTGGTGTTC+AGG | 0.258659 | 3_2:+86609521 | Msa0433950:CDS |
| ATCTCCTTTGATTGGTGTTC+AGG | 0.270626 | 3_2:+86614389 | Msa0433950:CDS |
| TGCAGTGGCTCGTGATGATT+TGG | 0.300225 | 3_2:+86614999 | Msa0433950:intron |
| AAGTTCTCAATATCTTTCTT+TGG | 0.300746 | 3_2:-86607878 | None:intergenic |
| CCCTCTAGGATAGGAATTAC+TGG | 0.302592 | 3_2:+86609355 | Msa0433950:CDS |
| CCCTCTAGGATAGGAATTAC+TGG | 0.302592 | 3_2:+86614216 | Msa0433950:CDS |
| CTTTAGAGTGTGATTGGTTA+AGG | 0.306239 | 3_2:+86616123 | Msa0433950:three_prime_UTR |
| AGAGTTAGCACGTGCAGTTT+TGG | 0.315635 | 3_2:-86607475 | None:intergenic |
| TGCAGTGGCTCGTGATGATT+TGG | 0.324534 | 3_2:+86610151 | Msa0433950:intron |
| CTGCCACTTATCGTTGTCTA+TGG | 0.328157 | 3_2:-86609645 | None:intergenic |
| GTTATTTGGTGCCCAATTCC+AGG | 0.335797 | 3_2:-86611083 | None:intergenic |
| AGAGGACGTGGTGCAATTAA+TGG | 0.336417 | 3_2:-86610523 | None:intergenic |
| AGGTCTTCTTGTCTGCTTAT+CGG | 0.339872 | 3_2:-86608068 | None:intergenic |
| TTTATTGCAGAACCTGGAAT+TGG | 0.347959 | 3_2:+86611071 | Msa0433950:CDS |
| GGGTGGTACTAGTTATGTTA+TGG | 0.348818 | 3_2:-86607387 | None:intergenic |
| GCGAGGATATATAGCAATTT+CGG | 0.361321 | 3_2:+86608313 | Msa0433950:CDS |
| GGTATGGGACTTGATTAAAT+TGG | 0.363313 | 3_2:+86614161 | Msa0433950:intron |
| TTTGCGACTTGGACGGTTAA+CGG | 0.373378 | 3_2:-86607800 | None:intergenic |
| GTAGTTGTAGCAGCAGTTAG+AGG | 0.373596 | 3_2:-86607517 | None:intergenic |
| GTTATTTGGTGCTCAATTCC+AGG | 0.379151 | 3_2:-86615830 | None:intergenic |
| GGTGGTACTAGTTATGTTAT+GGG | 0.382816 | 3_2:-86607386 | None:intergenic |
| ATAATCTCCTCATCGGTTGA+TGG | 0.388536 | 3_2:-86607845 | None:intergenic |
| TGACCGTGTAGATAATTTCC+AGG | 0.391195 | 3_2:+86610857 | Msa0433950:CDS |
| CACCCACCGTATCTTCTTCT+GGG | 0.392656 | 3_2:+86607405 | Msa0433950:five_prime_UTR |
| TCACCGCGCAGATAATTTCC+AGG | 0.400783 | 3_2:+86615567 | Msa0433950:CDS |
| TTGAGTACGGAGAATCAAAC+TGG | 0.402829 | 3_2:-86610498 | None:intergenic |
| GGAATTTCCAATCCGGCAAC+AGG | 0.409370 | 3_2:-86610801 | None:intergenic |
| GAATTTGCTCTGTTCTTCAA+TGG | 0.416872 | 3_2:-86607638 | None:intergenic |
| GATCCTAGGTGTCCTGTTGC+CGG | 0.420728 | 3_2:+86610789 | Msa0433950:CDS |
| GCACCAAATAACGAAATTCA+TGG | 0.424130 | 3_2:+86615841 | Msa0433950:CDS |
| GATCCTAGGTGTCCCCTTGC+CGG | 0.424626 | 3_2:+86615499 | Msa0433950:CDS |
| GCTGTGATATCTCCTTTGAT+TGG | 0.427515 | 3_2:+86614381 | Msa0433950:CDS |
| GCTGTGGTTGCTCCTCTGAT+TGG | 0.428440 | 3_2:+86609513 | Msa0433950:CDS |
| TTTAGAGTGTGATTGGTTAA+GGG | 0.429952 | 3_2:+86616124 | Msa0433950:three_prime_UTR |
| GGAGGAGAGTTATGCACAAC+TGG | 0.430458 | 3_2:-86612458 | None:intergenic |
| TAGGTGTCCCCTTGCCGGCT+TGG | 0.435205 | 3_2:+86615504 | Msa0433950:CDS |
| GCACCAAATAACAAAATTCA+TGG | 0.438719 | 3_2:+86611094 | Msa0433950:CDS |
| ACACGCCTTTAGAGTGTGAT+TGG | 0.442193 | 3_2:+86616117 | Msa0433950:three_prime_UTR |
| TTCTGAATCAGGTGTGGGAC+AGG | 0.445402 | 3_2:+86610455 | Msa0433950:intron |
| TATACTTGCAGGGATTTCAA+TGG | 0.447515 | 3_2:+86609621 | Msa0433950:intron |
| CGGAATTTCCAAGCCGGCAA+GGG | 0.450504 | 3_2:-86615512 | None:intergenic |
| GGTGTGGGACTTGATTAAAT+TGG | 0.451849 | 3_2:+86609300 | Msa0433950:intron |
| CTTGAGGAGGTCGTCTGTTA+CGG | 0.454080 | 3_2:-86607684 | None:intergenic |
| GTCAGACACACATAGAACTA+TGG | 0.454692 | 3_2:-86616049 | None:intergenic |
| GAACTTCAATGATTTGCTAA+AGG | 0.460609 | 3_2:+86607895 | Msa0433950:CDS |
| CGTTTATAAGTTTACAATCC+GGG | 0.464402 | 3_2:-86611167 | None:intergenic |
| TTCTGAATCAGGTGTGGGAC+AGG | 0.465243 | 3_2:+86615152 | Msa0433950:intron |
| TTATTGCAGAACCTGGAATT+GGG | 0.469101 | 3_2:+86611072 | Msa0433950:CDS |
| TTCTAGGTGCGGAAGATCCT+AGG | 0.469717 | 3_2:+86610775 | Msa0433950:intron |
| GGAGGAAAGTTATGCACCAT+TGG | 0.471425 | 3_2:-86607824 | None:intergenic |
| TGCCGTTGGAATTTCCAATC+CGG | 0.473950 | 3_2:-86610808 | None:intergenic |
| GTGTGGGACAGGATTGCTCC+TGG | 0.476440 | 3_2:+86610466 | Msa0433950:CDS |
| GCAGTGGCTCGTGATGATTT+GGG | 0.488487 | 3_2:+86615000 | Msa0433950:intron |
| TAGGTGTCCTGTTGCCGGAT+TGG | 0.489689 | 3_2:+86610794 | Msa0433950:CDS |
| CTCTAGGTGCCGAAGATCCT+AGG | 0.492565 | 3_2:+86615485 | Msa0433950:intron |
| GAGGAGGTCGTCTGTTACGG+AGG | 0.494509 | 3_2:-86607681 | None:intergenic |
| ATACTTGCAGGGATTTCAAT+GGG | 0.497847 | 3_2:+86609622 | Msa0433950:intron |
| TCCAACGGCAAAAGCAAGCC+AGG | 0.500606 | 3_2:+86610821 | Msa0433950:CDS |
| TTTGCAACTTCGACGGTCAA+CGG | 0.501322 | 3_2:-86612434 | None:intergenic |
| TCCGAGGGCAAAAGCAAGCC+AGG | 0.501486 | 3_2:+86615531 | Msa0433950:CDS |
| AAGGGGACACCTAGGATCTT+CGG | 0.501790 | 3_2:-86615494 | None:intergenic |
| AGTGTGAGCCTCAGCGATTA+TGG | 0.502010 | 3_2:-86607581 | None:intergenic |
| ATCTCTGCGTCCGTTGCTTG+AGG | 0.508578 | 3_2:+86613075 | Msa0433950:CDS |
| CCAGTAATTCCTATCCTAGA+GGG | 0.508883 | 3_2:-86609355 | None:intergenic |
| CCAGTAATTCCTATCCTAGA+GGG | 0.508883 | 3_2:-86614216 | None:intergenic |
| ATGCAGTTTATTGCAGAACC+TGG | 0.510076 | 3_2:+86615812 | Msa0433950:intron |
| CGTCCTCTGCTTATTCTCAA+TGG | 0.511134 | 3_2:+86610538 | Msa0433950:CDS |
| TATACTTGTTTGTACTGTGA+AGG | 0.513834 | 3_2:-86608102 | None:intergenic |
| CTAAAGCCTCAACTTATGCC+CGG | 0.514631 | 3_2:+86611149 | Msa0433950:CDS |
| CTCTCCTCCATCAGTGGACG+AGG | 0.517651 | 3_2:+86612472 | Msa0433950:CDS |
| GAATCTCTATCTAACTATAG+AGG | 0.519610 | 3_2:+86612631 | Msa0433950:CDS |
| CTGACAGTCTGACTTATGCC+GGG | 0.519953 | 3_2:+86616067 | Msa0433950:three_prime_UTR |
| AAAGTGATAAGCAGAGAAGA+AGG | 0.520541 | 3_2:+86613011 | Msa0433950:CDS |
| GAATCTCTACTTAACAATAG+AGG | 0.522796 | 3_2:+86607922 | Msa0433950:CDS |
| GGAATTACTGGAATATCCCT+TGG | 0.524073 | 3_2:+86614228 | Msa0433950:CDS |
| TGGTGAAAGAGTCATCTGAT+TGG | 0.524306 | 3_2:+86611114 | Msa0433950:CDS |
| TGGTGAAAGAGTCATCTGAT+TGG | 0.524306 | 3_2:+86615861 | Msa0433950:CDS |
| TCTGACAGTCTGACTTATGC+CGG | 0.524624 | 3_2:+86616066 | Msa0433950:three_prime_UTR |
| TATGCGAATTTGTACTGTGA+AGG | 0.524842 | 3_2:-86613048 | None:intergenic |
| ACGCAGTTTATTGCAGAACC+TGG | 0.525352 | 3_2:+86611065 | Msa0433950:intron |
| TTGAAAACCTCGTCCACTGA+TGG | 0.525623 | 3_2:-86612479 | None:intergenic |
| TACAATCCGGGTACATGTTG+AGG | 0.528532 | 3_2:-86615902 | None:intergenic |
| TGACAAAGAAGTGGTGGAGA+AGG | 0.529203 | 3_2:+86610187 | Msa0433950:CDS |
| TCGAGTTGACAGTATTAAGC+CGG | 0.531415 | 3_2:+86609670 | Msa0433950:CDS |
| CTTAACCAATCACACTCTAA+AGG | 0.532147 | 3_2:-86616122 | None:intergenic |
| TTGCCGGCTTGGAAATTCCG+AGG | 0.532808 | 3_2:+86615515 | Msa0433950:CDS |
| GCAATTAATGGAATTGAGTA+CGG | 0.532905 | 3_2:-86610511 | None:intergenic |
| CATAGACAACGATAAGTGGC+AGG | 0.535659 | 3_2:+86609646 | Msa0433950:CDS |
| GCAGTGGCTCGTGATGATTT+GGG | 0.536122 | 3_2:+86610152 | Msa0433950:intron |
| CTGCCACTTATCGTTGTCAA+TGG | 0.537434 | 3_2:-86614513 | None:intergenic |
| TGACAAAGAAGTGGTGGAGA+AGG | 0.537556 | 3_2:+86615035 | Msa0433950:CDS |
| TACAATCCGGGCATAAGTTG+AGG | 0.542036 | 3_2:-86611155 | None:intergenic |
| TGCCCTCGGAATTTCCAAGC+CGG | 0.542082 | 3_2:-86615518 | None:intergenic |
| TTGATTCAGGAATGCATGCA+TGG | 0.542270 | 3_2:+86609463 | Msa0433950:intron |
| TTGATTCAGGAATGCATGCA+TGG | 0.542975 | 3_2:+86614331 | Msa0433950:intron |
| TGCTATTGACAAAGAAGTGG+TGG | 0.545931 | 3_2:+86610181 | Msa0433950:CDS |
| GTGTGGGACAGGATCGCTCC+TGG | 0.547148 | 3_2:+86615163 | Msa0433950:CDS |
| TATACTTATAGGGATTTCGA+TGG | 0.548809 | 3_2:+86614489 | Msa0433950:intron |
| CTTCAATGATTTGCTAAAGG+AGG | 0.550072 | 3_2:+86607898 | Msa0433950:CDS |
| ATTACTGGAATATCCCTTGG+AGG | 0.553558 | 3_2:+86614231 | Msa0433950:CDS |
| TGCTATTGACAAAGAAGTGG+TGG | 0.554689 | 3_2:+86615029 | Msa0433950:CDS |
| GATATAGACCCCTCTAGGAT+AGG | 0.555872 | 3_2:+86609346 | Msa0433950:CDS |
| GATATAGACCCCTCTAGGAT+AGG | 0.555872 | 3_2:+86614207 | Msa0433950:CDS |
| TGAAGGAAGGTGATCAAGGA+TGG | 0.558664 | 3_2:+86612960 | Msa0433950:intron |
| TGATTGGTTAAGGGAAATAC+CGG | 0.558871 | 3_2:+86616133 | Msa0433950:three_prime_UTR |
| TTCTCTTAACCAACCTCCAA+GGG | 0.559540 | 3_2:-86614244 | None:intergenic |
| ATTACTGGAATATCACTTGG+AGG | 0.560375 | 3_2:+86609370 | Msa0433950:CDS |
| CTAAAGCCTCAACATGTACC+CGG | 0.560378 | 3_2:+86615896 | Msa0433950:CDS |
| CTTCTCTTAACCAACCTCCA+AGG | 0.562805 | 3_2:-86614245 | None:intergenic |
| GGGCCATTGACAACGATAAG+TGG | 0.564863 | 3_2:+86614510 | Msa0433950:CDS |
| TCAAACTGGGAAGCTAAACC+AGG | 0.565328 | 3_2:-86610484 | None:intergenic |
| TGATTTCATAATCTCCTCAT+CGG | 0.566337 | 3_2:-86607852 | None:intergenic |
| GGGCCATAGACAACGATAAG+TGG | 0.567303 | 3_2:+86609642 | Msa0433950:CDS |
| ATATCTACGTCCGTTGCTTG+AGG | 0.567698 | 3_2:+86608129 | Msa0433950:CDS |
| CATTGACAACGATAAGTGGC+AGG | 0.567708 | 3_2:+86614514 | Msa0433950:CDS |
| TTTAAGCTCAAAATCAGCAC+AGG | 0.571691 | 3_2:-86612986 | None:intergenic |
| ATATGAAGGAACGAGACAAT+CGG | 0.571865 | 3_2:+86607354 | Msa0433950:five_prime_UTR |
| GAACTTCAAAGATTTGCTCA+AGG | 0.572127 | 3_2:+86612604 | Msa0433950:CDS |
| TGCCGGCTTGGAAATTCCGA+GGG | 0.572657 | 3_2:+86615516 | Msa0433950:CDS |
| TGAGCCTCAGCGATTATGGC+AGG | 0.573201 | 3_2:-86607577 | None:intergenic |
| GAGAAGATATAGACCCCTCT+AGG | 0.573890 | 3_2:+86609341 | Msa0433950:CDS |
| GAGAAGATATAGACCCCTCT+AGG | 0.573890 | 3_2:+86614202 | Msa0433950:CDS |
| CTGTGAAGGAAAACAACTGC+AGG | 0.578552 | 3_2:-86608088 | None:intergenic |
| CTGTGAAGGAAAACAACTGC+AGG | 0.580341 | 3_2:-86613034 | None:intergenic |
| TGCCGGATTGGAAATTCCAA+CGG | 0.585605 | 3_2:+86610806 | Msa0433950:CDS |
| GGAATTACTGGAATATCACT+TGG | 0.586743 | 3_2:+86609367 | Msa0433950:CDS |
| GGAATTTCCAAGCCGGCAAG+GGG | 0.587551 | 3_2:-86615511 | None:intergenic |
| TCGGAATTTCCAAGCCGGCA+AGG | 0.591377 | 3_2:-86615513 | None:intergenic |
| CGTCCAAGTCGCAAAACCAA+TGG | 0.592502 | 3_2:+86607808 | Msa0433950:CDS |
| AAAACCTCGTCCACTGATGG+AGG | 0.593374 | 3_2:-86612476 | None:intergenic |
| TTGTAGCAGCAGTTAGAGGA+AGG | 0.603912 | 3_2:-86607513 | None:intergenic |
| GCATAACTCTCCTCCATCAG+TGG | 0.604315 | 3_2:+86612466 | Msa0433950:CDS |
| TTGAGAATAAGCAGAGGACG+TGG | 0.607381 | 3_2:-86610535 | None:intergenic |
| GTAGAAAAGAATTATGTCCC+CGG | 0.608029 | 3_2:-86616085 | None:intergenic |
| TGTAGGAAGGAGATCAAGGA+CGG | 0.608390 | 3_2:+86608014 | Msa0433950:intron |
| CAGTTAGAGGAAGGCACGTG+TGG | 0.608516 | 3_2:-86607504 | None:intergenic |
| ATGCAACCCAGAAGAAGATA+CGG | 0.613191 | 3_2:-86607411 | None:intergenic |
| GTGATAATATCATGGACTAG+AGG | 0.614781 | 3_2:-86616012 | None:intergenic |
| GTCACCTGAACACCAATCAA+AGG | 0.620523 | 3_2:-86614393 | None:intergenic |
| ATACTTATAGGGATTTCGAT+GGG | 0.623114 | 3_2:+86614490 | Msa0433950:intron |
| ATCTCCTCATCGGTTGATGG+AGG | 0.625755 | 3_2:-86607842 | None:intergenic |
| AAGCCGGCAAGGGGACACCT+AGG | 0.625755 | 3_2:-86615502 | None:intergenic |
| CGTAACAGACGACCTCCTCA+AGG | 0.627335 | 3_2:+86607685 | Msa0433950:CDS |
| CAGTAAGCAACCTCAAGCAA+CGG | 0.632746 | 3_2:-86608139 | None:intergenic |
| AAGTGCTATTGACAAAGAAG+TGG | 0.635080 | 3_2:+86610178 | Msa0433950:CDS |
| AGATGCTATTGACAAAGAAG+TGG | 0.635080 | 3_2:+86615026 | Msa0433950:CDS |
| AATCCGGCAACAGGACACCT+AGG | 0.637268 | 3_2:-86610792 | None:intergenic |
| TTCAAGCTCAAAATCAACAC+AGG | 0.639285 | 3_2:-86608040 | None:intergenic |
| CTTCAAAGATTTGCTCAAGG+AGG | 0.639578 | 3_2:+86612607 | Msa0433950:CDS |
| TCCAGTAATTCCTATCCTAG+AGG | 0.647345 | 3_2:-86609356 | None:intergenic |
| TCCAGTAATTCCTATCCTAG+AGG | 0.647345 | 3_2:-86614217 | None:intergenic |
| GGATTTGAAGAAACTCTGAT+CGG | 0.649728 | 3_2:-86607660 | None:intergenic |
| TGTTGAAACTCGCTATGCTG+TGG | 0.656337 | 3_2:+86609497 | Msa0433950:CDS |
| CGTAGCAGAAGACCTCCTCA+AGG | 0.661755 | 3_2:+86612312 | Msa0433950:intron |
| AGTATAACAACCTCAAGCAA+CGG | 0.663430 | 3_2:-86613085 | None:intergenic |
| TTTCAGGCATATGCTTCGCG+AGG | 0.664270 | 3_2:+86608296 | Msa0433950:intron |
| CAGTAATTCCTATCCTAGAG+GGG | 0.665391 | 3_2:-86609354 | None:intergenic |
| CAGTAATTCCTATCCTAGAG+GGG | 0.665391 | 3_2:-86614215 | None:intergenic |
| GTCACCTGAACACCAATCAG+AGG | 0.676055 | 3_2:-86609525 | None:intergenic |
| TGACAGTCTGACTTATGCCG+GGG | 0.684582 | 3_2:+86616068 | Msa0433950:three_prime_UTR |
| CTTTCCTCCATCAACCGATG+AGG | 0.685013 | 3_2:+86607838 | Msa0433950:CDS |
| GGAAACGTTGTACCTTGAGG+AGG | 0.689977 | 3_2:-86607697 | None:intergenic |
| ATTGTAATAGTACCTTGAGG+AGG | 0.690535 | 3_2:-86612324 | None:intergenic |
| CAACCCAGAAGAAGATACGG+TGG | 0.692535 | 3_2:-86607408 | None:intergenic |
| ATACCTGGAAATTATCTACA+CGG | 0.692922 | 3_2:-86610860 | None:intergenic |
| AACCCAGAAGAAGATACGGT+GGG | 0.699020 | 3_2:-86607407 | None:intergenic |
| AACACCTGCCATAATCGCTG+AGG | 0.702101 | 3_2:+86607573 | Msa0433950:CDS |
| TGAGTACGGAGAATCAAACT+GGG | 0.711383 | 3_2:-86610497 | None:intergenic |
| CCAGAAGAAGATACGGTGGG+TGG | 0.721226 | 3_2:-86607404 | None:intergenic |
| TGAAGGAACGAGACAATCGG+AGG | 0.722491 | 3_2:+86607357 | Msa0433950:five_prime_UTR |
| ATACCTGGAAATTATCTGCG+CGG | 0.746053 | 3_2:-86615570 | None:intergenic |
| CTACCATTGAGAATAAGCAG+AGG | 0.746627 | 3_2:-86610541 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATTTAGATTTATATAAAA+TGG | + | chr3_2:86609780-86609799 | Msa0433950:intron | 10.0% |
| !!! | TTTTTTTTTCAAATTTATGA+TGG | - | chr3_2:86610938-86610957 | None:intergenic | 10.0% |
| !! | ATTGTTTAATTATTATATTG+TGG | + | chr3_2:86613168-86613187 | Msa0433950:intron | 10.0% |
| !!! | GTTTTTTTTTTATTTTAACT+TGG | + | chr3_2:86615433-86615452 | Msa0433950:intron | 10.0% |
| !!! | ACTAATTAATTTGATTTCAT+AGG | + | chr3_2:86607963-86607982 | Msa0433950:intron | 15.0% |
| !!! | CTAATTAATTTGATTTCATA+GGG | + | chr3_2:86607964-86607983 | Msa0433950:intron | 15.0% |
| !!! | TTGATTAGCTTATAATAAAA+TGG | + | chr3_2:86608225-86608244 | Msa0433950:intron | 15.0% |
| !!! | TGATCAATTTTGAATTTATA+CGG | - | chr3_2:86609010-86609029 | None:intergenic | 15.0% |
| !! | ATAAATCTAAATGAAATAGT+AGG | - | chr3_2:86609774-86609793 | None:intergenic | 15.0% |
| !! | AAATTATAATATACTACCTA+TGG | + | chr3_2:86609944-86609963 | Msa0433950:intron | 15.0% |
| !! | TTCAGAAATATAAAATCTTA+AGG | - | chr3_2:86610442-86610461 | None:intergenic | 15.0% |
| !!! | TATCAATAAACTTCAAATTT+TGG | + | chr3_2:86611624-86611643 | Msa0433950:intron | 15.0% |
| !!! | TGAACTATTTAACTTTTTTA+TGG | + | chr3_2:86611729-86611748 | Msa0433950:intron | 15.0% |
| !!! | TTTGACTTTAGTATTTTTAT+TGG | - | chr3_2:86612030-86612049 | None:intergenic | 15.0% |
| !!! | TTGTAAATCAAAATCTATTT+TGG | - | chr3_2:86613744-86613763 | None:intergenic | 15.0% |
| !! | TCATTCAGATTTATATAAAA+TGG | + | chr3_2:86614651-86614670 | Msa0433950:intron | 15.0% |
| !!! | TTGTTTATAATTTTACAATC+CGG | - | chr3_2:86615918-86615937 | None:intergenic | 15.0% |
| !!! | ATTTTATTGTGATAATATCA+TGG | - | chr3_2:86616023-86616042 | None:intergenic | 15.0% |
| !!! | TAAATATTCGTTGATTTTGT+AGG | + | chr3_2:86607997-86608016 | Msa0433950:intron | 20.0% |
| !!! | TAAAAATCAAATTGCTATTC+TGG | - | chr3_2:86608770-86608789 | None:intergenic | 20.0% |
| !! | TGCTTTCATAAATTATAGTT+AGG | + | chr3_2:86609855-86609874 | Msa0433950:intron | 20.0% |
| !! | TCAATTTCTTAAAAGAGAAA+TGG | + | chr3_2:86609897-86609916 | Msa0433950:intron | 20.0% |
| !!! | AGATTTTATATTTCTGAATC+AGG | + | chr3_2:86610444-86610463 | Msa0433950:intron | 20.0% |
| !!! | ATGCGTAGTTTAAAATTAAA+TGG | - | chr3_2:86610986-86611005 | None:intergenic | 20.0% |
| !!! | ATTTTATTGCGATAATAACA+TGG | - | chr3_2:86611276-86611295 | None:intergenic | 20.0% |
| !! | GTATAAGGTTAAAATATGAA+GGG | - | chr3_2:86611812-86611831 | None:intergenic | 20.0% |
| !!! | TTCATATTTTAACCTTATAC+CGG | + | chr3_2:86611812-86611831 | Msa0433950:intron | 20.0% |
| !!! | ATATTTTGTTTAAAAGCACA+CGG | + | chr3_2:86611992-86612011 | Msa0433950:intron | 20.0% |
| !! | AAATACTAAAGTCAAAGTAA+TGG | + | chr3_2:86612034-86612053 | Msa0433950:intron | 20.0% |
| !! | AATACATCCATTAATTTAGT+TGG | - | chr3_2:86612089-86612108 | None:intergenic | 20.0% |
| !!! | TGTTATTTGGATTTGATTTT+TGG | + | chr3_2:86612718-86612737 | Msa0433950:intron | 20.0% |
| !!! | GTTATTTGGATTTGATTTTT+GGG | + | chr3_2:86612719-86612738 | Msa0433950:intron | 20.0% |
| !! | TCTAGTATTATAATTCTTGA+TGG | + | chr3_2:86612742-86612761 | Msa0433950:intron | 20.0% |
| !!! | ATTATGTTTGTTGATTTTGA+AGG | + | chr3_2:86612943-86612962 | Msa0433950:intron | 20.0% |
| !!! | AATCACAAATCTTATTTCAT+AGG | - | chr3_2:86613151-86613170 | None:intergenic | 20.0% |
| !!! | TTGATTTGATTTGAAATCAT+TGG | + | chr3_2:86613641-86613660 | Msa0433950:intron | 20.0% |
| !!! | AAATCATTGGATTTAGTTTT+GGG | + | chr3_2:86613654-86613673 | Msa0433950:intron | 20.0% |
| !! | ATATAAGAAATTCCTATGTT+TGG | - | chr3_2:86613795-86613814 | None:intergenic | 20.0% |
| !!! | TTTATTTTTCACTTTTGTCT+TGG | + | chr3_2:86613894-86613913 | Msa0433950:intron | 20.0% |
| !!! | TTTTGCATCATATACTTATA+GGG | + | chr3_2:86614479-86614498 | Msa0433950:intron | 20.0% |
| !! | ATTATAATACCTTCAAAAAC+AGG | - | chr3_2:86614560-86614579 | None:intergenic | 20.0% |
| !!! | ATAAAATGGAATAACTGTTT+TGG | + | chr3_2:86614665-86614684 | Msa0433950:intron | 20.0% |
| !! | AAATCATAATACACAAAAAC+TGG | - | chr3_2:86614712-86614731 | None:intergenic | 20.0% |
| !! | TGATTTCATAAATCATAGTT+TGG | + | chr3_2:86614726-86614745 | Msa0433950:intron | 20.0% |
| !! | TTGAATAAACAATAAAGACA+AGG | - | chr3_2:86615267-86615286 | None:intergenic | 20.0% |
| !!! | TTAGTCAATTTAGATACTTT+TGG | + | chr3_2:86615409-86615428 | Msa0433950:intron | 20.0% |
| !!! | TAGTCAATTTAGATACTTTT+GGG | + | chr3_2:86615410-86615429 | Msa0433950:intron | 20.0% |
| !!! | CTTTTTTTTCAAATTGACAA+GGG | - | chr3_2:86615660-86615679 | None:intergenic | 20.0% |
| !!! | ACGAGTAGTTTAAAATTAAA+TGG | - | chr3_2:86615733-86615752 | None:intergenic | 20.0% |
| !!! | TGTTTATAATTTTACAATCC+GGG | - | chr3_2:86615917-86615936 | None:intergenic | 20.0% |
| !! | GAATTTCATTTCTAGAAGAA+TGG | - | chr3_2:86607754-86607773 | None:intergenic | 25.0% |
| ! | AAGTTCTCAATATCTTTCTT+TGG | - | chr3_2:86607881-86607900 | None:intergenic | 25.0% |
| !! | TGAATTGCACTATGTTATTT+AGG | + | chr3_2:86608553-86608572 | Msa0433950:intron | 25.0% |
| !! | TCTAAAGCTTAGATTCTATA+AGG | - | chr3_2:86608843-86608862 | None:intergenic | 25.0% |
| !!! | CATTTGTTTTTCACTTTTGT+TGG | + | chr3_2:86609028-86609047 | Msa0433950:intron | 25.0% |
| ! | TTTCTAAACCAAAGTAATCA+TGG | - | chr3_2:86609247-86609266 | None:intergenic | 25.0% |
| ! | TGACATTGAATTATTGAATG+AGG | + | chr3_2:86609544-86609563 | Msa0433950:intron | 25.0% |
| !! | TCATATCATATTTTCCTTCT+AGG | - | chr3_2:86610013-86610032 | None:intergenic | 25.0% |
| ! | GGAAAATATGATATGAACAT+AGG | + | chr3_2:86610017-86610036 | Msa0433950:intron | 25.0% |
| ! | TACAAAGACAAAACTCTATA+TGG | - | chr3_2:86610379-86610398 | None:intergenic | 25.0% |
| !! | TTAGTCAATCTAGATACTTT+TGG | + | chr3_2:86610704-86610723 | Msa0433950:intron | 25.0% |
| !! | TAGTCAATCTAGATACTTTT+GGG | + | chr3_2:86610705-86610724 | Msa0433950:intron | 25.0% |
| ! | AAAAAGCCTAGATATAACAT+TGG | + | chr3_2:86610954-86610973 | Msa0433950:intron | 25.0% |
| ! | ACTACGCATAATAATAGAAA+TGG | + | chr3_2:86610997-86611016 | Msa0433950:intron | 25.0% |
| !!! | TCACCATGAATTTTGTTATT+TGG | - | chr3_2:86611100-86611119 | None:intergenic | 25.0% |
| ! | TCGTTTATAAGTTTACAATC+CGG | - | chr3_2:86611171-86611190 | None:intergenic | 25.0% |
| !! | TTTAGAGTGTTATTGGTTAA+GGG | + | chr3_2:86611373-86611392 | Msa0433950:intron | 25.0% |
| !! | CTCTCTCTTTTCTTTTTTTT+AGG | + | chr3_2:86611453-86611472 | Msa0433950:intron | 25.0% |
| ! | GGTATAAGGTTAAAATATGA+AGG | - | chr3_2:86611813-86611832 | None:intergenic | 25.0% |
| !!! | TCATATTTTAACCTTATACC+GGG | + | chr3_2:86611813-86611832 | Msa0433950:intron | 25.0% |
| ! | AAAAGAGTCTTTATGTTAAG+TGG | + | chr3_2:86611891-86611910 | Msa0433950:intron | 25.0% |
| ! | AAAGAGTCTTTATGTTAAGT+GGG | + | chr3_2:86611892-86611911 | Msa0433950:intron | 25.0% |
| ! | AATGAAGTACATATACGTAA+CGG | + | chr3_2:86611952-86611971 | Msa0433950:intron | 25.0% |
| ! | TGCAACTAGTGTTTATAAAA+AGG | + | chr3_2:86612171-86612190 | Msa0433950:intron | 25.0% |
| ! | GCAACTAGTGTTTATAAAAA+GGG | + | chr3_2:86612172-86612191 | Msa0433950:intron | 25.0% |
| !! | TCCATTAACAATTTTATAGC+AGG | + | chr3_2:86612547-86612566 | Msa0433950:intron | 25.0% |
| ! | TCCTGCTATAAAATTGTTAA+TGG | - | chr3_2:86612551-86612570 | None:intergenic | 25.0% |
| !!! | TTGTGGATTTAATTTGTCTT+TGG | + | chr3_2:86613185-86613204 | Msa0433950:intron | 25.0% |
| ! | AAGAAAGTTAAGTGAAGTAA+AGG | - | chr3_2:86613329-86613348 | None:intergenic | 25.0% |
| ! | CTAAATGTAACTACATGTAT+TGG | + | chr3_2:86613431-86613450 | Msa0433950:intron | 25.0% |
| ! | TAACTCATGTTCAATCTAAA+AGG | + | chr3_2:86613513-86613532 | Msa0433950:intron | 25.0% |
| !!! | GAAATCATTGGATTTAGTTT+TGG | + | chr3_2:86613653-86613672 | Msa0433950:intron | 25.0% |
| !!! | AATCATTGGATTTAGTTTTG+GGG | + | chr3_2:86613655-86613674 | Msa0433950:intron | 25.0% |
| ! | TTGTAATGAATTCCAAACAT+AGG | + | chr3_2:86613780-86613799 | Msa0433950:intron | 25.0% |
| !! | AAATAATTTAGGGCATAAAG+TGG | - | chr3_2:86614046-86614065 | None:intergenic | 25.0% |
| ! | ACTTTATGCCCTAAATTATT+TGG | + | chr3_2:86614045-86614064 | Msa0433950:intron | 25.0% |
| ! | CATGTCAACCAAATAATTTA+GGG | - | chr3_2:86614056-86614075 | None:intergenic | 25.0% |
| ! | ACATGTCAACCAAATAATTT+AGG | - | chr3_2:86614057-86614076 | None:intergenic | 25.0% |
| !! | GTTTTGCATCATATACTTAT+AGG | + | chr3_2:86614478-86614497 | Msa0433950:intron | 25.0% |
| ! | ATAAATCTGAATGAAGTAGT+AGG | - | chr3_2:86614645-86614664 | None:intergenic | 25.0% |
| ! | TTAATGTTCTCATTTACGAT+CGG | + | chr3_2:86614785-86614804 | Msa0433950:intron | 25.0% |
| ! | GCAAAACACTTAAATTCATA+TGG | - | chr3_2:86615104-86615123 | None:intergenic | 25.0% |
| ! | AGTATCTAAATTGACTAACA+CGG | - | chr3_2:86615407-86615426 | None:intergenic | 25.0% |
| !! | AGTCAATTTAGATACTTTTG+GGG | + | chr3_2:86615411-86615430 | Msa0433950:intron | 25.0% |
| !!! | GCTTTTTTTTCAAATTGACA+AGG | - | chr3_2:86615661-86615680 | None:intergenic | 25.0% |
| ! | ACATTGGAAATAAAAATTGC+AGG | - | chr3_2:86615706-86615725 | None:intergenic | 25.0% |
| ! | AAAATTAAATGGTGCAACAT+TGG | - | chr3_2:86615722-86615741 | None:intergenic | 25.0% |
| ! | ACTACTCGTAATAATAGAAA+TGG | + | chr3_2:86615744-86615763 | Msa0433950:intron | 25.0% |
| ! | AATTATAAACAAACTCACTC+TGG | + | chr3_2:86615926-86615945 | Msa0433950:intron | 25.0% |
| ! | ACATACAAACAATCATACAA+AGG | - | chr3_2:86615965-86615984 | None:intergenic | 25.0% |
| !! | GACATAATTCTTTTCTACTT+AGG | + | chr3_2:86616090-86616109 | Msa0433950:three_prime_UTR | 25.0% |
| !! | TTTTGTCTTGTTGCATATGA+AGG | + | chr3_2:86607340-86607359 | Msa0433950:five_prime_UTR | 30.0% |
| TCACATAGAATCTCCAAAAA+TGG | + | chr3_2:86607603-86607622 | Msa0433950:CDS | 30.0% | |
| TCTCCAAAAATGGAAGAAAA+TGG | + | chr3_2:86607613-86607632 | Msa0433950:CDS | 30.0% | |
| TGATTTCATAATCTCCTCAT+CGG | - | chr3_2:86607855-86607874 | None:intergenic | 30.0% | |
| !! | GAACTTCAATGATTTGCTAA+AGG | + | chr3_2:86607895-86607914 | Msa0433950:CDS | 30.0% |
| GAATCTCTACTTAACAATAG+AGG | + | chr3_2:86607922-86607941 | Msa0433950:CDS | 30.0% | |
| !!! | TATTCGTTGATTTTGTAGGA+AGG | + | chr3_2:86608001-86608020 | Msa0433950:intron | 30.0% |
| TATACTTGTTTGTACTGTGA+AGG | - | chr3_2:86608105-86608124 | None:intergenic | 30.0% | |
| TTGTTCTACTCCTATGAAAT+TGG | + | chr3_2:86608191-86608210 | Msa0433950:intron | 30.0% | |
| CATGCTAAATCCAATTTCAT+AGG | - | chr3_2:86608204-86608223 | None:intergenic | 30.0% | |
| !!! | ATCATCGATTTTTTTGCCTT+TGG | + | chr3_2:86608265-86608284 | Msa0433950:intron | 30.0% |
| ! | AAATCTATGAAGCACTTACA+CGG | + | chr3_2:86608628-86608647 | Msa0433950:intron | 30.0% |
| AATGCCATTCATATATGACA+CGG | + | chr3_2:86609108-86609127 | Msa0433950:intron | 30.0% | |
| TTTACCGTGTCATATATGAA+TGG | - | chr3_2:86609115-86609134 | None:intergenic | 30.0% | |
| AGTTTGAACCATGATTACTT+TGG | + | chr3_2:86609236-86609255 | Msa0433950:intron | 30.0% | |
| TATACTATTGTTCCTTGATC+TGG | + | chr3_2:86609275-86609294 | Msa0433950:intron | 30.0% | |
| CTTACATTATTCCTTGATTC+AGG | + | chr3_2:86609450-86609469 | Msa0433950:intron | 30.0% | |
| TTTCACATCATATACTTGCA+GGG | + | chr3_2:86609611-86609630 | Msa0433950:intron | 30.0% | |
| !! | ATATGAACATAGGTGCTATT+GGG | + | chr3_2:86610027-86610046 | Msa0433950:intron | 30.0% |
| !!! | TTTTTTTAGTCGTTCATAGC+TGG | - | chr3_2:86610069-86610088 | None:intergenic | 30.0% |
| AAAATATTCTGAATGTGCCT+TGG | + | chr3_2:86610085-86610104 | Msa0433950:intron | 30.0% | |
| TTAGGATGTACAAATTACCA+AGG | - | chr3_2:86610105-86610124 | None:intergenic | 30.0% | |
| ATATCTAGTTATTCATCCAC+TGG | + | chr3_2:86610344-86610363 | Msa0433950:intron | 30.0% | |
| ! | TTATATTTCTGAATCAGGTG+TGG | + | chr3_2:86610449-86610468 | Msa0433950:intron | 30.0% |
| ! | TATATTTCTGAATCAGGTGT+GGG | + | chr3_2:86610450-86610469 | Msa0433950:intron | 30.0% |
| GCAATTAATGGAATTGAGTA+CGG | - | chr3_2:86610514-86610533 | None:intergenic | 30.0% | |
| CAACACTTTCAAATTGTAGT+TGG | + | chr3_2:86610580-86610599 | Msa0433950:intron | 30.0% | |
| TTCATATGCAAATTGATGTG+TGG | + | chr3_2:86610611-86610630 | Msa0433950:intron | 30.0% | |
| ATTGACTAATACAGATGCAT+AGG | - | chr3_2:86610693-86610712 | None:intergenic | 30.0% | |
| ! | AGTCAATCTAGATACTTTTG+GGG | + | chr3_2:86610706-86610725 | Msa0433950:intron | 30.0% |
| ! | TTGGAATTGAAGCATTCAAT+TGG | + | chr3_2:86610742-86610761 | Msa0433950:intron | 30.0% |
| ! | TGGAATTGAAGCATTCAATT+GGG | + | chr3_2:86610743-86610762 | Msa0433950:intron | 30.0% |
| AATTGGGTGTTCATAATTCT+AGG | + | chr3_2:86610759-86610778 | Msa0433950:intron | 30.0% | |
| ATACCTGGAAATTATCTACA+CGG | - | chr3_2:86610863-86610882 | None:intergenic | 30.0% | |
| GCACCAAATAACAAAATTCA+TGG | + | chr3_2:86611094-86611113 | Msa0433950:CDS | 30.0% | |
| CGTTTATAAGTTTACAATCC+GGG | - | chr3_2:86611170-86611189 | None:intergenic | 30.0% | |
| TACAATGATACAAAGACAAC+TGG | - | chr3_2:86611211-86611230 | None:intergenic | 30.0% | |
| CTTAACCAATAACACTCTAA+AGG | - | chr3_2:86611374-86611393 | None:intergenic | 30.0% | |
| !! | CTTTAGAGTGTTATTGGTTA+AGG | + | chr3_2:86611372-86611391 | Msa0433950:intron | 30.0% |
| !!! | CATATTTTAACCTTATACCG+GGG | + | chr3_2:86611814-86611833 | Msa0433950:intron | 30.0% |
| TACTAAAGTCAAAGTAATGG+CGG | + | chr3_2:86612037-86612056 | Msa0433950:intron | 30.0% | |
| CAAGCAACCAACTAAATTAA+TGG | + | chr3_2:86612079-86612098 | Msa0433950:intron | 30.0% | |
| ! | CACAAAAGTTGATTCCAAAA+TGG | + | chr3_2:86612230-86612249 | Msa0433950:intron | 30.0% |
| TGATTCCAAAATGGATGAAA+AGG | + | chr3_2:86612239-86612258 | Msa0433950:intron | 30.0% | |
| GAAATTGTAATAGTACCTTG+AGG | - | chr3_2:86612330-86612349 | None:intergenic | 30.0% | |
| AAGTTCACAATGACTTTCTT+TGG | - | chr3_2:86612590-86612609 | None:intergenic | 30.0% | |
| GAATCTCTATCTAACTATAG+AGG | + | chr3_2:86612631-86612650 | Msa0433950:CDS | 30.0% | |
| !!! | TTTCTCTCGAGTTGAATTTT+TGG | + | chr3_2:86612684-86612703 | Msa0433950:intron | 30.0% |
| !!! | GGATCGACATTTTTGTTATT+TGG | + | chr3_2:86612705-86612724 | Msa0433950:intron | 30.0% |
| AGTTGTTCTGATTGCTATAT+AGG | - | chr3_2:86612844-86612863 | None:intergenic | 30.0% | |
| !!! | TGTTTGTTGATTTTGAAGGA+AGG | + | chr3_2:86612947-86612966 | Msa0433950:intron | 30.0% |
| ATCAATACATACATCACGAT+AGG | - | chr3_2:86613300-86613319 | None:intergenic | 30.0% | |
| AATAACATAGTGCAATCCAT+TGG | - | chr3_2:86613560-86613579 | None:intergenic | 30.0% | |
| ! | TGGATTGCACTATGTTATTT+AGG | + | chr3_2:86613561-86613580 | Msa0433950:intron | 30.0% |
| ! | GGATTGCACTATGTTATTTA+GGG | + | chr3_2:86613562-86613581 | Msa0433950:intron | 30.0% |
| !!! | ATCATTGGATTTAGTTTTGG+GGG | + | chr3_2:86613656-86613675 | Msa0433950:intron | 30.0% |
| !! | CCAGAGAGTTATTTTCTATA+GGG | - | chr3_2:86613871-86613890 | None:intergenic | 30.0% |
| !! | ACCAGAGAGTTATTTTCTAT+AGG | - | chr3_2:86613872-86613891 | None:intergenic | 30.0% |
| AATGCCATTCATATATGACA+CGG | + | chr3_2:86609108-86609127 | Msa0433950:intron | 30.0% | |
| TATACCGTGTCATATATGAA+TGG | - | chr3_2:86613981-86614000 | None:intergenic | 30.0% | |
| CAAAGAATCATGTAAGTGAT+GGG | - | chr3_2:86614314-86614333 | None:intergenic | 30.0% | |
| TCAAAGAATCATGTAAGTGA+TGG | - | chr3_2:86614315-86614334 | None:intergenic | 30.0% | |
| CTTACATGATTCTTTGATTC+AGG | + | chr3_2:86614318-86614337 | Msa0433950:intron | 30.0% | |
| TATACTTATAGGGATTTCGA+TGG | + | chr3_2:86614489-86614508 | Msa0433950:intron | 30.0% | |
| ATACTTATAGGGATTTCGAT+GGG | + | chr3_2:86614490-86614509 | Msa0433950:intron | 30.0% | |
| !!! | AGTATAAAGCCTGTTTTTGA+AGG | + | chr3_2:86614548-86614567 | Msa0433950:CDS | 30.0% |
| TAATAAACACGTGAAAGACA+AGG | - | chr3_2:86614600-86614619 | None:intergenic | 30.0% | |
| CAAAAACTGGTATGATTACT+GGG | - | chr3_2:86614699-86614718 | None:intergenic | 30.0% | |
| ACAAAAACTGGTATGATTAC+TGG | - | chr3_2:86614700-86614719 | None:intergenic | 30.0% | |
| TAATTATGATAGACTGCCTA+TGG | + | chr3_2:86614815-86614834 | Msa0433950:intron | 30.0% | |
| TTGTGTTATGGTATGAATCT+CGG | + | chr3_2:86614876-86614895 | Msa0433950:intron | 30.0% | |
| ATTCTCGAGACAATTATAGT+TGG | - | chr3_2:86615081-86615100 | None:intergenic | 30.0% | |
| TTCAGAAATATCAACTCTTG+AGG | - | chr3_2:86615139-86615158 | None:intergenic | 30.0% | |
| !! | AGAGTTGATATTTCTGAATC+AGG | + | chr3_2:86615141-86615160 | Msa0433950:intron | 30.0% |
| ATACAATATGAGTACATACC+TGG | - | chr3_2:86615588-86615607 | None:intergenic | 30.0% | |
| AAAAAGCCTAGAGTTAACAT+TGG | + | chr3_2:86615674-86615693 | Msa0433950:intron | 30.0% | |
| TCACCATGAATTTCGTTATT+TGG | - | chr3_2:86615847-86615866 | None:intergenic | 30.0% | |
| ! | TTTAGAGTGTGATTGGTTAA+GGG | + | chr3_2:86616124-86616143 | Msa0433950:three_prime_UTR | 30.0% |
| ATATGAAGGAACGAGACAAT+CGG | + | chr3_2:86607354-86607373 | Msa0433950:five_prime_UTR | 35.0% | |
| GGTGGTACTAGTTATGTTAT+GGG | - | chr3_2:86607389-86607408 | None:intergenic | 35.0% | |
| ! | GAATTTGCTCTGTTCTTCAA+TGG | - | chr3_2:86607641-86607660 | None:intergenic | 35.0% |
| GGATTTGAAGAAACTCTGAT+CGG | - | chr3_2:86607663-86607682 | None:intergenic | 35.0% | |
| !! | CTTCAATGATTTGCTAAAGG+AGG | + | chr3_2:86607898-86607917 | Msa0433950:CDS | 35.0% |
| ! | ATTTTGTAGGAAGGAGATCA+AGG | + | chr3_2:86608010-86608029 | Msa0433950:intron | 35.0% |
| TTCAAGCTCAAAATCAACAC+AGG | - | chr3_2:86608043-86608062 | None:intergenic | 35.0% | |
| !!! | TGTGTTGATTTTGAGCTTGA+AGG | + | chr3_2:86608042-86608061 | Msa0433950:CDS | 35.0% |
| GCGAGGATATATAGCAATTT+CGG | + | chr3_2:86608313-86608332 | Msa0433950:CDS | 35.0% | |
| CTATAACTAAACGTAAGCAG+AGG | - | chr3_2:86608407-86608426 | None:intergenic | 35.0% | |
| ATATATACCACCAACATTCG+CGG | - | chr3_2:86608522-86608541 | None:intergenic | 35.0% | |
| AACTTCAATCTACTCAGAGA+AGG | + | chr3_2:86608598-86608617 | Msa0433950:intron | 35.0% | |
| !! | ACTTTTGTTGGTTAACCCTT+GGG | + | chr3_2:86609040-86609059 | Msa0433950:intron | 35.0% |
| ACAAAGTAGCATGATAGACA+AGG | - | chr3_2:86609144-86609163 | None:intergenic | 35.0% | |
| ACAGGTCAACCAAATCATTT+GGG | - | chr3_2:86609190-86609209 | None:intergenic | 35.0% | |
| TACAGGTCAACCAAATCATT+TGG | - | chr3_2:86609191-86609210 | None:intergenic | 35.0% | |
| GGAATTACTGGAATATCACT+TGG | + | chr3_2:86609367-86609386 | Msa0433950:CDS | 35.0% | |
| ATTACTGGAATATCACTTGG+AGG | + | chr3_2:86609370-86609389 | Msa0433950:CDS | 35.0% | |
| AGAAGTTGAGAGGAATATGT+TGG | + | chr3_2:86609402-86609421 | Msa0433950:intron | 35.0% | |
| CTTTCACATCATATACTTGC+AGG | + | chr3_2:86609610-86609629 | Msa0433950:intron | 35.0% | |
| TATACTTGCAGGGATTTCAA+TGG | + | chr3_2:86609621-86609640 | Msa0433950:intron | 35.0% | |
| ATACTTGCAGGGATTTCAAT+GGG | + | chr3_2:86609622-86609641 | Msa0433950:intron | 35.0% | |
| !! | AGTATTAAGCCGGTTTTTGA+AGG | + | chr3_2:86609680-86609699 | Msa0433950:CDS | 35.0% |
| AAGCACTACACATAACAAAC+CGG | - | chr3_2:86609840-86609859 | None:intergenic | 35.0% | |
| !! | TACCTATGGATTAGAGTACA+TGG | + | chr3_2:86609958-86609977 | Msa0433950:intron | 35.0% |
| GTTTAAGAGTAAGACCTAGA+AGG | + | chr3_2:86609996-86610015 | Msa0433950:intron | 35.0% | |
| ! | GATATGAACATAGGTGCTAT+TGG | + | chr3_2:86610026-86610045 | Msa0433950:intron | 35.0% |
| ! | AAGTGCTATTGACAAAGAAG+TGG | + | chr3_2:86610178-86610197 | Msa0433950:CDS | 35.0% |
| AAAGCATGCTTGACAATTGT+TGG | + | chr3_2:86610296-86610315 | Msa0433950:intron | 35.0% | |
| TATATGGAAATTCTGTCCAG+TGG | - | chr3_2:86610363-86610382 | None:intergenic | 35.0% | |
| ! | GTCAATCTAGATACTTTTGG+GGG | + | chr3_2:86610707-86610726 | Msa0433950:intron | 35.0% |
| !!! | TTGGGGGTTTTGATTTAACT+TGG | + | chr3_2:86610723-86610742 | Msa0433950:intron | 35.0% |
| !!! | GGTCAAATTTTTTGTATGCC+TGG | - | chr3_2:86610842-86610861 | None:intergenic | 35.0% |
| ! | TTTATGATGGAGTCCACATT+TGG | - | chr3_2:86610925-86610944 | None:intergenic | 35.0% |
| TTGCAGCCAATGTTATATCT+AGG | - | chr3_2:86610963-86610982 | None:intergenic | 35.0% | |
| TTTATTGCAGAACCTGGAAT+TGG | + | chr3_2:86611071-86611090 | Msa0433950:CDS | 35.0% | |
| TTATTGCAGAACCTGGAATT+GGG | + | chr3_2:86611072-86611091 | Msa0433950:CDS | 35.0% | |
| ACTTATAAACGAACTCACTC+TGG | + | chr3_2:86611179-86611198 | Msa0433950:intron | 35.0% | |
| TTCTATGTGTGTCTGACTTA+TGG | + | chr3_2:86611308-86611327 | Msa0433950:intron | 35.0% | |
| CAGATAGGAATCATATCTCT+TGG | - | chr3_2:86611334-86611353 | None:intergenic | 35.0% | |
| TTTCAACAAGTGAGAGCTAA+TGG | + | chr3_2:86611855-86611874 | Msa0433950:intron | 35.0% | |
| !! | ATATACGTAACGGTGTTACT+TGG | + | chr3_2:86611962-86611981 | Msa0433950:intron | 35.0% |
| ACTAAAGTCAAAGTAATGGC+GGG | + | chr3_2:86612038-86612057 | Msa0433950:intron | 35.0% | |
| ! | CTCTTTGTTTACCAATCACT+CGG | - | chr3_2:86612199-86612218 | None:intergenic | 35.0% |
| GGATTTGAAGAAACTCTGAT+CGG | - | chr3_2:86607663-86607682 | None:intergenic | 35.0% | |
| ATTGTAATAGTACCTTGAGG+AGG | - | chr3_2:86612327-86612346 | None:intergenic | 35.0% | |
| ! | GAACTTCAAAGATTTGCTCA+AGG | + | chr3_2:86612604-86612623 | Msa0433950:CDS | 35.0% |
| ! | CATAGATGACAGAAAAGCAT+AGG | + | chr3_2:86612769-86612788 | Msa0433950:intron | 35.0% |
| !! | ATTTTGAAGGAAGGTGATCA+AGG | + | chr3_2:86612956-86612975 | Msa0433950:intron | 35.0% |
| TTTAAGCTCAAAATCAGCAC+AGG | - | chr3_2:86612989-86613008 | None:intergenic | 35.0% | |
| !!! | TGTGCTGATTTTGAGCTTAA+AGG | + | chr3_2:86612988-86613007 | Msa0433950:CDS | 35.0% |
| AAAGTGATAAGCAGAGAAGA+AGG | + | chr3_2:86613011-86613030 | Msa0433950:CDS | 35.0% | |
| TATGCGAATTTGTACTGTGA+AGG | - | chr3_2:86613051-86613070 | None:intergenic | 35.0% | |
| AGTATAACAACCTCAAGCAA+CGG | - | chr3_2:86613088-86613107 | None:intergenic | 35.0% | |
| ! | ATTTTTGTGCTTATGCTTCG+CGG | + | chr3_2:86613213-86613232 | Msa0433950:intron | 35.0% |
| GTGGGGCATATTCAAAATAA+TGG | + | chr3_2:86613685-86613704 | Msa0433950:intron | 35.0% | |
| ! | GTATTGACATCGTAGTGATT+CGG | + | chr3_2:86613825-86613844 | Msa0433950:intron | 35.0% |
| CCCTATAGAAAATAACTCTC+TGG | + | chr3_2:86613868-86613887 | Msa0433950:intron | 35.0% | |
| ATTATTTCCGCATGGAAAAC+TGG | + | chr3_2:86613945-86613964 | Msa0433950:intron | 35.0% | |
| ACAAAGCAGCATAATACACA+AGG | - | chr3_2:86614010-86614029 | None:intergenic | 35.0% | |
| !!! | ACATGTAGTTTTGTAGTTCG+TGG | + | chr3_2:86614071-86614090 | Msa0433950:intron | 35.0% |
| CTGTGTATTATTCCTTGATC+TGG | + | chr3_2:86614136-86614155 | Msa0433950:intron | 35.0% | |
| GGTATGGGACTTGATTAAAT+TGG | + | chr3_2:86614161-86614180 | Msa0433950:intron | 35.0% | |
| TAGGAGCAATAACTAAAGCA+AGG | - | chr3_2:86609755-86609774 | None:intergenic | 35.0% | |
| ACTTCACCATATGATTCCAT+AGG | - | chr3_2:86614834-86614853 | None:intergenic | 35.0% | |
| ATGGAATCATATGGTGAAGT+TGG | + | chr3_2:86614834-86614853 | Msa0433950:intron | 35.0% | |
| ! | AAGTTGGAAAAGTGTGTAGA+AGG | + | chr3_2:86614850-86614869 | Msa0433950:intron | 35.0% |
| ! | AGTTGGAAAAGTGTGTAGAA+GGG | + | chr3_2:86614851-86614870 | Msa0433950:intron | 35.0% |
| GCAAATATTCTAAACATGCC+TGG | + | chr3_2:86614944-86614963 | Msa0433950:intron | 35.0% | |
| AGCATTAGGATGTAATTTCC+AGG | - | chr3_2:86614965-86614984 | None:intergenic | 35.0% | |
| AGATGCTATTGACAAAGAAG+TGG | + | chr3_2:86615026-86615045 | Msa0433950:CDS | 35.0% | |
| ! | TGATATTTCTGAATCAGGTG+TGG | + | chr3_2:86615146-86615165 | Msa0433950:intron | 35.0% |
| ! | GATATTTCTGAATCAGGTGT+GGG | + | chr3_2:86615147-86615166 | Msa0433950:intron | 35.0% |
| AATTGATGGAATTGAGTAGG+GGG | - | chr3_2:86615209-86615228 | None:intergenic | 35.0% | |
| CAATTGATGGAATTGAGTAG+GGG | - | chr3_2:86615210-86615229 | None:intergenic | 35.0% | |
| GCAATTGATGGAATTGAGTA+GGG | - | chr3_2:86615211-86615230 | None:intergenic | 35.0% | |
| TGCAATTGATGGAATTGAGT+AGG | - | chr3_2:86615212-86615231 | None:intergenic | 35.0% | |
| TTACCATTGAGAATAAGCAG+AGG | - | chr3_2:86615241-86615260 | None:intergenic | 35.0% | |
| CAACATTTCCAAACTGTAGT+TGG | + | chr3_2:86615284-86615303 | Msa0433950:intron | 35.0% | |
| TATTGCTTCCAACTACAGTT+TGG | - | chr3_2:86615295-86615314 | None:intergenic | 35.0% | |
| TCTAAATTGACTAACACGGA+TGG | - | chr3_2:86615403-86615422 | None:intergenic | 35.0% | |
| ! | TTGGAATTGAAGCATTCACT+TGG | + | chr3_2:86615452-86615471 | Msa0433950:intron | 35.0% |
| ! | TGGAATTGAAGCATTCACTT+GGG | + | chr3_2:86615453-86615472 | Msa0433950:intron | 35.0% |
| GCACCAAATAACGAAATTCA+TGG | + | chr3_2:86615841-86615860 | Msa0433950:CDS | 35.0% | |
| AACAATCATACAAAGGCAAC+TGG | - | chr3_2:86615958-86615977 | None:intergenic | 35.0% | |
| !! | GTGATAATATCATGGACTAG+AGG | - | chr3_2:86616015-86616034 | None:intergenic | 35.0% |
| GTAGAAAAGAATTATGTCCC+CGG | - | chr3_2:86616088-86616107 | None:intergenic | 35.0% | |
| CTTAACCAATCACACTCTAA+AGG | - | chr3_2:86616125-86616144 | None:intergenic | 35.0% | |
| !! | CTTTAGAGTGTGATTGGTTA+AGG | + | chr3_2:86616123-86616142 | Msa0433950:three_prime_UTR | 35.0% |
| GGGTGGTACTAGTTATGTTA+TGG | - | chr3_2:86607390-86607409 | None:intergenic | 40.0% | |
| ATGCAACCCAGAAGAAGATA+CGG | - | chr3_2:86607414-86607433 | None:intergenic | 40.0% | |
| !! | GCGCCATTTTCTTCCATTTT+TGG | - | chr3_2:86607619-86607638 | None:intergenic | 40.0% |
| ! | ATAATCTCCTCATCGGTTGA+TGG | - | chr3_2:86607848-86607867 | None:intergenic | 40.0% |
| AGGTCTTCTTGTCTGCTTAT+CGG | - | chr3_2:86608071-86608090 | None:intergenic | 40.0% | |
| AATACATACATCGCGATAGG+TGG | - | chr3_2:86608378-86608397 | None:intergenic | 40.0% | |
| GCAAATACATACATCGCGAT+AGG | - | chr3_2:86608381-86608400 | None:intergenic | 40.0% | |
| GCTTATGTTTCTCTCTGTGA+AGG | - | chr3_2:86608984-86609003 | None:intergenic | 40.0% | |
| !! | CACTTTTGTTGGTTAACCCT+TGG | + | chr3_2:86609039-86609058 | Msa0433950:intron | 40.0% |
| !! | CTTTTGTTGGTTAACCCTTG+GGG | + | chr3_2:86609041-86609060 | Msa0433950:intron | 40.0% |
| ACCCTTGGGGTAAAAATAAC+AGG | + | chr3_2:86609054-86609073 | Msa0433950:intron | 40.0% | |
| !!! | GCCTGTTATTTTTACCCCAA+GGG | - | chr3_2:86609058-86609077 | None:intergenic | 40.0% |
| !!! | AGCCTGTTATTTTTACCCCA+AGG | - | chr3_2:86609059-86609078 | None:intergenic | 40.0% |
| CTTATATCCGCATGGAAAAC+CGG | + | chr3_2:86609079-86609098 | Msa0433950:intron | 40.0% | |
| TATGAATGGCATTGTGTCTC+CGG | - | chr3_2:86609101-86609120 | None:intergenic | 40.0% | |
| AGTAGCATGATAGACAAGGA+AGG | - | chr3_2:86609140-86609159 | None:intergenic | 40.0% | |
| ! | AAATCATTTGGGGCACAAAG+TGG | - | chr3_2:86609179-86609198 | None:intergenic | 40.0% |
| ACTTTGTGCCCCAAATGATT+TGG | + | chr3_2:86609178-86609197 | Msa0433950:intron | 40.0% | |
| CAGGTCAACCAAATCATTTG+GGG | - | chr3_2:86609189-86609208 | None:intergenic | 40.0% | |
| GGTGTGGGACTTGATTAAAT+TGG | + | chr3_2:86609300-86609319 | Msa0433950:intron | 40.0% | |
| CAGTAATTCCTATCCTAGAG+GGG | - | chr3_2:86609357-86609376 | None:intergenic | 40.0% | |
| CCAGTAATTCCTATCCTAGA+GGG | - | chr3_2:86609358-86609377 | None:intergenic | 40.0% | |
| TCCAGTAATTCCTATCCTAG+AGG | - | chr3_2:86609359-86609378 | None:intergenic | 40.0% | |
| GTGATGTGTCACAACAAACT+TGG | - | chr3_2:86609431-86609450 | None:intergenic | 40.0% | |
| ATGCATGCATTCCTGAATCA+AGG | - | chr3_2:86609464-86609483 | None:intergenic | 40.0% | |
| TTGATTCAGGAATGCATGCA+TGG | + | chr3_2:86609463-86609482 | Msa0433950:intron | 40.0% | |
| !! | TCGAGTTGACAGTATTAAGC+CGG | + | chr3_2:86609670-86609689 | Msa0433950:CDS | 40.0% |
| !! | TAAGCCGGTTTTTGAAGGTA+CGG | + | chr3_2:86609685-86609704 | Msa0433950:intron | 40.0% |
| ATCACCGTACCTTCAAAAAC+CGG | - | chr3_2:86609692-86609711 | None:intergenic | 40.0% | |
| TAACCCTAGTAACCATGTAC+CGG | + | chr3_2:86609818-86609837 | Msa0433950:intron | 40.0% | |
| AAACCGGTACATGGTTACTA+GGG | - | chr3_2:86609824-86609843 | None:intergenic | 40.0% | |
| ACACATAACAAACCGGTACA+TGG | - | chr3_2:86609833-86609852 | None:intergenic | 40.0% | |
| CACCATGTACTCTAATCCAT+AGG | - | chr3_2:86609963-86609982 | None:intergenic | 40.0% | |
| TGCTATTGACAAAGAAGTGG+TGG | + | chr3_2:86610181-86610200 | Msa0433950:CDS | 40.0% | |
| !! | CTTGACAATTGTTGGTGCTA+TGG | + | chr3_2:86610304-86610323 | Msa0433950:intron | 40.0% |
| TGAGTACGGAGAATCAAACT+GGG | - | chr3_2:86610500-86610519 | None:intergenic | 40.0% | |
| TTGAGTACGGAGAATCAAAC+TGG | - | chr3_2:86610501-86610520 | None:intergenic | 40.0% | |
| CTACCATTGAGAATAAGCAG+AGG | - | chr3_2:86610544-86610563 | None:intergenic | 40.0% | |
| GGTGTTCATAATTCTAGGTG+CGG | + | chr3_2:86610764-86610783 | Msa0433950:intron | 40.0% | |
| TGACCGTGTAGATAATTTCC+AGG | + | chr3_2:86610857-86610876 | Msa0433950:CDS | 40.0% | |
| TGCTAATATGAGTGCATACC+TGG | - | chr3_2:86610878-86610897 | None:intergenic | 40.0% | |
| TGGTGAAAGAGTCATCTGAT+TGG | + | chr3_2:86611114-86611133 | Msa0433950:CDS | 40.0% | |
| !! | GCGATAATAACATGGACTAG+AGG | - | chr3_2:86611268-86611287 | None:intergenic | 40.0% |
| GTCAGACACACATAGAACTA+TGG | - | chr3_2:86611305-86611324 | None:intergenic | 40.0% | |
| CATATCTCTTGTTACAGCCT+CGG | - | chr3_2:86611404-86611423 | None:intergenic | 40.0% | |
| ! | TAAAAGCACACGGATGTGTT+TGG | + | chr3_2:86612002-86612021 | Msa0433950:intron | 40.0% |
| ! | AAAAGCACACGGATGTGTTT+GGG | + | chr3_2:86612003-86612022 | Msa0433950:intron | 40.0% |
| ATAAAAAGGGACCGAGTGAT+TGG | + | chr3_2:86612185-86612204 | Msa0433950:intron | 40.0% | |
| ! | GGCTTCCTTTTCATCCATTT+TGG | - | chr3_2:86612247-86612266 | None:intergenic | 40.0% |
| !!! | AACTGGTTTTGCAACTTCGA+CGG | - | chr3_2:86612444-86612463 | None:intergenic | 40.0% |
| ! | CTTCAAAGATTTGCTCAAGG+AGG | + | chr3_2:86612607-86612626 | Msa0433950:CDS | 40.0% |
| ! | TTTTTGTGCTTATGCTTCGC+GGG | + | chr3_2:86613214-86613233 | Msa0433950:intron | 40.0% |
| ! | AGTTCTAATCTATGAAGCGC+CGG | + | chr3_2:86613351-86613370 | Msa0433950:intron | 40.0% |
| ! | CTAAAAGGTGTGTGATGCAT+AGG | + | chr3_2:86613528-86613547 | Msa0433950:intron | 40.0% |
| GATGCATAGGTTATGTCCAA+TGG | + | chr3_2:86613541-86613560 | Msa0433950:intron | 40.0% | |
| ! | TTTTGTCTTGGTTACCCCTT+GGG | + | chr3_2:86613906-86613925 | Msa0433950:intron | 40.0% |
| !!! | CCTGTTTTTTTTACCCCAAG+GGG | - | chr3_2:86613923-86613942 | None:intergenic | 40.0% |
| !!! | GCCTGTTTTTTTTACCCCAA+GGG | - | chr3_2:86613924-86613943 | None:intergenic | 40.0% |
| !!! | AGCCTGTTTTTTTTACCCCA+AGG | - | chr3_2:86613925-86613944 | None:intergenic | 40.0% |
| AACAGGCTATTATTTCCGCA+TGG | + | chr3_2:86613937-86613956 | Msa0433950:intron | 40.0% | |
| AGCAGCATAATACACAAGGA+GGG | - | chr3_2:86614006-86614025 | None:intergenic | 40.0% | |
| AAGCAGCATAATACACAAGG+AGG | - | chr3_2:86614007-86614026 | None:intergenic | 40.0% | |
| GTATTATTCCTTGATCTGGC+AGG | + | chr3_2:86614140-86614159 | Msa0433950:intron | 40.0% | |
| CAGTAATTCCTATCCTAGAG+GGG | - | chr3_2:86609357-86609376 | None:intergenic | 40.0% | |
| CCAGTAATTCCTATCCTAGA+GGG | - | chr3_2:86609358-86609377 | None:intergenic | 40.0% | |
| TCCAGTAATTCCTATCCTAG+AGG | - | chr3_2:86609359-86609378 | None:intergenic | 40.0% | |
| GGAATTACTGGAATATCCCT+TGG | + | chr3_2:86614228-86614247 | Msa0433950:CDS | 40.0% | |
| ATTACTGGAATATCCCTTGG+AGG | + | chr3_2:86614231-86614250 | Msa0433950:CDS | 40.0% | |
| TTCTCTTAACCAACCTCCAA+GGG | - | chr3_2:86614247-86614266 | None:intergenic | 40.0% | |
| AAGAGAAGTTGACACTTGAG+AGG | + | chr3_2:86614260-86614279 | Msa0433950:intron | 40.0% | |
| TTGATTCAGGAATGCATGCA+TGG | + | chr3_2:86609463-86609482 | Msa0433950:intron | 40.0% | |
| GCTGTGATATCTCCTTTGAT+TGG | + | chr3_2:86614381-86614400 | Msa0433950:CDS | 40.0% | |
| ! | ATCTCCTTTGATTGGTGTTC+AGG | + | chr3_2:86614389-86614408 | Msa0433950:CDS | 40.0% |
| AGACTGCCTATGGAATCATA+TGG | + | chr3_2:86614825-86614844 | Msa0433950:intron | 40.0% | |
| ! | GTTGGAAAAGTGTGTAGAAG+GGG | + | chr3_2:86614852-86614871 | Msa0433950:intron | 40.0% |
| ! | TTGGAAAAGTGTGTAGAAGG+GGG | + | chr3_2:86614853-86614872 | Msa0433950:intron | 40.0% |
| GTATGAATCTCGGTCCTATT+GGG | + | chr3_2:86614886-86614905 | Msa0433950:intron | 40.0% | |
| TGCTTGCATAAGTACCCAAT+AGG | - | chr3_2:86614903-86614922 | None:intergenic | 40.0% | |
| TTTGCTCAGTCATTCATTGC+TGG | - | chr3_2:86614929-86614948 | None:intergenic | 40.0% | |
| !! | AGCATGAACTCAAGAGCATT+AGG | - | chr3_2:86614979-86614998 | None:intergenic | 40.0% |
| TGCTATTGACAAAGAAGTGG+TGG | + | chr3_2:86610181-86610200 | Msa0433950:CDS | 40.0% | |
| TCAAATTGGGAAGCTTAACC+AGG | - | chr3_2:86615184-86615203 | None:intergenic | 40.0% | |
| TGAGTAGGGGGAATCAAATT+GGG | - | chr3_2:86615197-86615216 | None:intergenic | 40.0% | |
| TTGAGTAGGGGGAATCAAAT+TGG | - | chr3_2:86615198-86615217 | None:intergenic | 40.0% | |
| ATTGACTAACACGGATGGAT+AGG | - | chr3_2:86615398-86615417 | None:intergenic | 40.0% | |
| ATACCTGGAAATTATCTGCG+CGG | - | chr3_2:86615573-86615592 | None:intergenic | 40.0% | |
| TGACAAGGGAAGTTCACATT+TGG | - | chr3_2:86615646-86615665 | None:intergenic | 40.0% | |
| TTGCAGCCAATGTTAACTCT+AGG | - | chr3_2:86615683-86615702 | None:intergenic | 40.0% | |
| ATGCAGTTTATTGCAGAACC+TGG | + | chr3_2:86615812-86615831 | Msa0433950:intron | 40.0% | |
| !! | GTTATTTGGTGCTCAATTCC+AGG | - | chr3_2:86615833-86615852 | None:intergenic | 40.0% |
| TGGTGAAAGAGTCATCTGAT+TGG | + | chr3_2:86611114-86611133 | Msa0433950:CDS | 40.0% | |
| GTCAGACACACATAGAACTA+TGG | - | chr3_2:86611305-86611324 | None:intergenic | 40.0% | |
| AACCCAGAAGAAGATACGGT+GGG | - | chr3_2:86607410-86607429 | None:intergenic | 45.0% | |
| ! | GAGTTAGCACGTGCAGTTTT+GGG | - | chr3_2:86607477-86607496 | None:intergenic | 45.0% |
| ! | AGAGTTAGCACGTGCAGTTT+TGG | - | chr3_2:86607478-86607497 | None:intergenic | 45.0% |
| TTGTAGCAGCAGTTAGAGGA+AGG | - | chr3_2:86607516-86607535 | None:intergenic | 45.0% | |
| GTAGTTGTAGCAGCAGTTAG+AGG | - | chr3_2:86607520-86607539 | None:intergenic | 45.0% | |
| ATACATAGCCATCGAGATCG+TGG | - | chr3_2:86607721-86607740 | None:intergenic | 45.0% | |
| ! | TTTGCGACTTGGACGGTTAA+CGG | - | chr3_2:86607803-86607822 | None:intergenic | 45.0% |
| !!! | CATTGGTTTTGCGACTTGGA+CGG | - | chr3_2:86607810-86607829 | None:intergenic | 45.0% |
| GGAGGAAAGTTATGCACCAT+TGG | - | chr3_2:86607827-86607846 | None:intergenic | 45.0% | |
| TGTAGGAAGGAGATCAAGGA+CGG | + | chr3_2:86608014-86608033 | Msa0433950:intron | 45.0% | |
| CTGTGAAGGAAAACAACTGC+AGG | - | chr3_2:86608091-86608110 | None:intergenic | 45.0% | |
| ATATCTACGTCCGTTGCTTG+AGG | + | chr3_2:86608129-86608148 | Msa0433950:CDS | 45.0% | |
| CAGTAAGCAACCTCAAGCAA+CGG | - | chr3_2:86608142-86608161 | None:intergenic | 45.0% | |
| ! | TCGGTTGATTCTCGTTACCA+TGG | + | chr3_2:86608332-86608351 | Msa0433950:intron | 45.0% |
| AACAGGCTCTTATATCCGCA+TGG | + | chr3_2:86609071-86609090 | Msa0433950:intron | 45.0% | |
| TGCGCTAATGCTTTCATCGA+TGG | - | chr3_2:86609217-86609236 | None:intergenic | 45.0% | |
| CTATTGTTCCTTGATCTGGC+AGG | + | chr3_2:86609279-86609298 | Msa0433950:intron | 45.0% | |
| GAGAAGATATAGACCCCTCT+AGG | + | chr3_2:86609341-86609360 | Msa0433950:CDS | 45.0% | |
| !! | GATATAGACCCCTCTAGGAT+AGG | + | chr3_2:86609346-86609365 | Msa0433950:CDS | 45.0% |
| !! | CCCTCTAGGATAGGAATTAC+TGG | + | chr3_2:86609355-86609374 | Msa0433950:CDS | 45.0% |
| CTGGAATATCACTTGGAGGT+TGG | + | chr3_2:86609374-86609393 | Msa0433950:intron | 45.0% | |
| GTTGGTTGAGAGAAGTTGAG+AGG | + | chr3_2:86609392-86609411 | Msa0433950:intron | 45.0% | |
| TGTTGAAACTCGCTATGCTG+TGG | + | chr3_2:86609497-86609516 | Msa0433950:CDS | 45.0% | |
| ! | CTGCCACTTATCGTTGTCTA+TGG | - | chr3_2:86609648-86609667 | None:intergenic | 45.0% |
| CATAGACAACGATAAGTGGC+AGG | + | chr3_2:86609646-86609665 | Msa0433950:CDS | 45.0% | |
| CAAACCGGTACATGGTTACT+AGG | - | chr3_2:86609825-86609844 | None:intergenic | 45.0% | |
| CTGCATACATGAACCCAAGA+GGG | - | chr3_2:86610136-86610155 | None:intergenic | 45.0% | |
| ACTGCATACATGAACCCAAG+AGG | - | chr3_2:86610137-86610156 | None:intergenic | 45.0% | |
| TCTTGGGTTCATGTATGCAG+TGG | + | chr3_2:86610136-86610155 | Msa0433950:intron | 45.0% | |
| ! | TGACAAAGAAGTGGTGGAGA+AGG | + | chr3_2:86610187-86610206 | Msa0433950:CDS | 45.0% |
| ACGTCTTTCGCAGTAGATAC+TGG | + | chr3_2:86610409-86610428 | Msa0433950:intron | 45.0% | |
| TCAAACTGGGAAGCTAAACC+AGG | - | chr3_2:86610487-86610506 | None:intergenic | 45.0% | |
| AGAGGACGTGGTGCAATTAA+TGG | - | chr3_2:86610526-86610545 | None:intergenic | 45.0% | |
| TTGAGAATAAGCAGAGGACG+TGG | - | chr3_2:86610538-86610557 | None:intergenic | 45.0% | |
| CGTCCTCTGCTTATTCTCAA+TGG | + | chr3_2:86610538-86610557 | Msa0433950:CDS | 45.0% | |
| ! | TGCCGGATTGGAAATTCCAA+CGG | + | chr3_2:86610806-86610825 | Msa0433950:CDS | 45.0% |
| TGCCGTTGGAATTTCCAATC+CGG | - | chr3_2:86610811-86610830 | None:intergenic | 45.0% | |
| AATCTCACACCTGCCAAATG+TGG | + | chr3_2:86610909-86610928 | Msa0433950:intron | 45.0% | |
| ACGCAGTTTATTGCAGAACC+TGG | + | chr3_2:86611065-86611084 | Msa0433950:intron | 45.0% | |
| !! | GTTATTTGGTGCCCAATTCC+AGG | - | chr3_2:86611086-86611105 | None:intergenic | 45.0% |
| CTAAAGCCTCAACTTATGCC+CGG | + | chr3_2:86611149-86611168 | Msa0433950:CDS | 45.0% | |
| TACAATCCGGGCATAAGTTG+AGG | - | chr3_2:86611158-86611177 | None:intergenic | 45.0% | |
| TGCGTGCATACAGAACAGAT+AGG | - | chr3_2:86611349-86611368 | None:intergenic | 45.0% | |
| !! | GCACGCCTTTAGAGTGTTAT+TGG | + | chr3_2:86611366-86611385 | Msa0433950:intron | 45.0% |
| AGCTATTCCTAAGATTGCCC+CGG | - | chr3_2:86611834-86611853 | None:intergenic | 45.0% | |
| ! | GAACTTGCTCTGAGCTTCAA+TGG | - | chr3_2:86612268-86612287 | None:intergenic | 45.0% |
| TTTGCAACTTCGACGGTCAA+CGG | - | chr3_2:86612437-86612456 | None:intergenic | 45.0% | |
| TTGAAAACCTCGTCCACTGA+TGG | - | chr3_2:86612482-86612501 | None:intergenic | 45.0% | |
| TGAAGGAAGGTGATCAAGGA+TGG | + | chr3_2:86612960-86612979 | Msa0433950:intron | 45.0% | |
| CTGTGAAGGAAAACAACTGC+AGG | - | chr3_2:86608091-86608110 | None:intergenic | 45.0% | |
| ! | TTTTGTGCTTATGCTTCGCG+GGG | + | chr3_2:86613215-86613234 | Msa0433950:intron | 45.0% |
| TTACCATGATGAACGTGCGA+AGG | + | chr3_2:86613265-86613284 | Msa0433950:intron | 45.0% | |
| !!! | TTAGTTTTGGGGGACTTCAG+TGG | + | chr3_2:86613666-86613685 | Msa0433950:intron | 45.0% |
| !!! | TAGTTTTGGGGGACTTCAGT+GGG | + | chr3_2:86613667-86613686 | Msa0433950:intron | 45.0% |
| ! | CTTTTGTCTTGGTTACCCCT+TGG | + | chr3_2:86613905-86613924 | Msa0433950:intron | 45.0% |
| TTTGTCTTGGTTACCCCTTG+GGG | + | chr3_2:86613907-86613926 | Msa0433950:intron | 45.0% | |
| CCCCTTGGGGTAAAAAAAAC+AGG | + | chr3_2:86613920-86613939 | Msa0433950:intron | 45.0% | |
| ! | TGTGTCTCCAGTTTTCCATG+CGG | - | chr3_2:86613955-86613974 | None:intergenic | 45.0% |
| GCAGCATAATACACAAGGAG+GGG | - | chr3_2:86614005-86614024 | None:intergenic | 45.0% | |
| ATTCCTTGATCTGGCAGGTA+TGG | + | chr3_2:86614145-86614164 | Msa0433950:intron | 45.0% | |
| TTCCTTGATCTGGCAGGTAT+GGG | + | chr3_2:86614146-86614165 | Msa0433950:intron | 45.0% | |
| GAGAAGATATAGACCCCTCT+AGG | + | chr3_2:86609341-86609360 | Msa0433950:CDS | 45.0% | |
| !! | GATATAGACCCCTCTAGGAT+AGG | + | chr3_2:86609346-86609365 | Msa0433950:CDS | 45.0% |
| !! | CCCTCTAGGATAGGAATTAC+TGG | + | chr3_2:86609355-86609374 | Msa0433950:CDS | 45.0% |
| CTTCTCTTAACCAACCTCCA+AGG | - | chr3_2:86614248-86614267 | None:intergenic | 45.0% | |
| GTCACCTGAACACCAATCAA+AGG | - | chr3_2:86614396-86614415 | None:intergenic | 45.0% | |
| ! | CTGCCACTTATCGTTGTCAA+TGG | - | chr3_2:86614516-86614535 | None:intergenic | 45.0% |
| CATTGACAACGATAAGTGGC+AGG | + | chr3_2:86614514-86614533 | Msa0433950:CDS | 45.0% | |
| TGTAGAAGGGGGTTGTGTTA+TGG | + | chr3_2:86614864-86614883 | Msa0433950:intron | 45.0% | |
| GGTATGAATCTCGGTCCTAT+TGG | + | chr3_2:86614885-86614904 | Msa0433950:intron | 45.0% | |
| TCTTGAGTTCATGCTTGCAG+TGG | + | chr3_2:86614984-86615003 | Msa0433950:intron | 45.0% | |
| ! | TGACAAAGAAGTGGTGGAGA+AGG | + | chr3_2:86610187-86610206 | Msa0433950:CDS | 45.0% |
| TTGAGAATAAGCAGAGGACG+TGG | - | chr3_2:86610538-86610557 | None:intergenic | 45.0% | |
| CGTCCTCTGCTTATTCTCAA+TGG | + | chr3_2:86610538-86610557 | Msa0433950:CDS | 45.0% | |
| ACTTGGGTGTTCCTAACTCT+AGG | + | chr3_2:86615469-86615488 | Msa0433950:intron | 45.0% | |
| GGTGAAAAACTTCGTATGCC+TGG | - | chr3_2:86615552-86615571 | None:intergenic | 45.0% | |
| AAGGGAAGTTCACATTTGGC+AGG | - | chr3_2:86615642-86615661 | None:intergenic | 45.0% | |
| CTAAAGCCTCAACATGTACC+CGG | + | chr3_2:86615896-86615915 | Msa0433950:CDS | 45.0% | |
| TACAATCCGGGTACATGTTG+AGG | - | chr3_2:86615905-86615924 | None:intergenic | 45.0% | |
| TCTGACAGTCTGACTTATGC+CGG | + | chr3_2:86616066-86616085 | Msa0433950:three_prime_UTR | 45.0% | |
| !! | ACACGCCTTTAGAGTGTGAT+TGG | + | chr3_2:86616117-86616136 | Msa0433950:three_prime_UTR | 45.0% |
| TGAAGGAACGAGACAATCGG+AGG | + | chr3_2:86607357-86607376 | Msa0433950:five_prime_UTR | 50.0% | |
| CACCCACCGTATCTTCTTCT+GGG | + | chr3_2:86607405-86607424 | Msa0433950:five_prime_UTR | 50.0% | |
| CAACCCAGAAGAAGATACGG+TGG | - | chr3_2:86607411-86607430 | None:intergenic | 50.0% | |
| !!! | AGTTTTGGGAGTGGGTAAGC+AGG | - | chr3_2:86607463-86607482 | None:intergenic | 50.0% |
| AACACCTGCCATAATCGCTG+AGG | + | chr3_2:86607573-86607592 | Msa0433950:CDS | 50.0% | |
| AGTGTGAGCCTCAGCGATTA+TGG | - | chr3_2:86607584-86607603 | None:intergenic | 50.0% | |
| CTTGAGGAGGTCGTCTGTTA+CGG | - | chr3_2:86607687-86607706 | None:intergenic | 50.0% | |
| GGAAACGTTGTACCTTGAGG+AGG | - | chr3_2:86607700-86607719 | None:intergenic | 50.0% | |
| CGTGGAAACGTTGTACCTTG+AGG | - | chr3_2:86607703-86607722 | None:intergenic | 50.0% | |
| CAACGTTTCCACGATCTCGA+TGG | + | chr3_2:86607710-86607729 | Msa0433950:intron | 50.0% | |
| CGTCCAAGTCGCAAAACCAA+TGG | + | chr3_2:86607808-86607827 | Msa0433950:CDS | 50.0% | |
| !!! | GCACCATTGGTTTTGCGACT+TGG | - | chr3_2:86607814-86607833 | None:intergenic | 50.0% |
| CTTTCCTCCATCAACCGATG+AGG | + | chr3_2:86607838-86607857 | Msa0433950:CDS | 50.0% | |
| !! | ATCTCCTCATCGGTTGATGG+AGG | - | chr3_2:86607845-86607864 | None:intergenic | 50.0% |
| ! | GCCTTTGGTCTTCGTGTTTC+AGG | + | chr3_2:86608280-86608299 | Msa0433950:intron | 50.0% |
| GCCTGAAACACGAAGACCAA+AGG | - | chr3_2:86608284-86608303 | None:intergenic | 50.0% | |
| TTTCAGGCATATGCTTCGCG+AGG | + | chr3_2:86608296-86608315 | Msa0433950:intron | 50.0% | |
| CGTTCTTTGCACGTTCACCA+TGG | - | chr3_2:86608352-86608371 | None:intergenic | 50.0% | |
| GCGGTCTGACACAACACTTA+CGG | - | chr3_2:86608503-86608522 | None:intergenic | 50.0% | |
| TTGTGTCAGACCGCGAATGT+TGG | + | chr3_2:86608509-86608528 | Msa0433950:intron | 50.0% | |
| ! | TGAAGCACTTACACGGACAC+AGG | + | chr3_2:86608635-86608654 | Msa0433950:intron | 50.0% |
| ! | TGTGTCTCCGGTTTTCCATG+CGG | - | chr3_2:86609089-86609108 | None:intergenic | 50.0% |
| GCTTTCATCGATGGAGCTAC+AGG | - | chr3_2:86609208-86609227 | None:intergenic | 50.0% | |
| TTCCTTGATCTGGCAGGTGT+GGG | + | chr3_2:86609285-86609304 | Msa0433950:intron | 50.0% | |
| ! | TGCTCCTCTGATTGGTGTTC+AGG | + | chr3_2:86609521-86609540 | Msa0433950:CDS | 50.0% |
| GTCACCTGAACACCAATCAG+AGG | - | chr3_2:86609528-86609547 | None:intergenic | 50.0% | |
| GGGCCATAGACAACGATAAG+TGG | + | chr3_2:86609642-86609661 | Msa0433950:CDS | 50.0% | |
| TCCTAATGCTCTTGCCCTCT+TGG | + | chr3_2:86610119-86610138 | Msa0433950:intron | 50.0% | |
| CCTAATGCTCTTGCCCTCTT+GGG | + | chr3_2:86610120-86610139 | Msa0433950:intron | 50.0% | |
| TGCAGTGGCTCGTGATGATT+TGG | + | chr3_2:86610151-86610170 | Msa0433950:intron | 50.0% | |
| GCAGTGGCTCGTGATGATTT+GGG | + | chr3_2:86610152-86610171 | Msa0433950:intron | 50.0% | |
| TTCTGAATCAGGTGTGGGAC+AGG | + | chr3_2:86610455-86610474 | Msa0433950:intron | 50.0% | |
| TTCTAGGTGCGGAAGATCCT+AGG | + | chr3_2:86610775-86610794 | Msa0433950:intron | 50.0% | |
| GGAATTTCCAATCCGGCAAC+AGG | - | chr3_2:86610804-86610823 | None:intergenic | 50.0% | |
| TGATGGAGTCCACATTTGGC+AGG | - | chr3_2:86610921-86610940 | None:intergenic | 50.0% | |
| ATTGGTTAAGGGAGCTACCG+AGG | + | chr3_2:86611384-86611403 | Msa0433950:intron | 50.0% | |
| CCTAAGATTGCCCCGGTATA+AGG | - | chr3_2:86611827-86611846 | None:intergenic | 50.0% | |
| CCTTATACCGGGGCAATCTT+AGG | + | chr3_2:86611824-86611843 | Msa0433950:intron | 50.0% | |
| CTTGAGGAGGTCTTCTGCTA+CGG | - | chr3_2:86612314-86612333 | None:intergenic | 50.0% | |
| GGAGGAGAGTTATGCACAAC+TGG | - | chr3_2:86612461-86612480 | None:intergenic | 50.0% | |
| GCATAACTCTCCTCCATCAG+TGG | + | chr3_2:86612466-86612485 | Msa0433950:CDS | 50.0% | |
| AAAACCTCGTCCACTGATGG+AGG | - | chr3_2:86612479-86612498 | None:intergenic | 50.0% | |
| TGTCCTTCGCACGTTCATCA+TGG | - | chr3_2:86613271-86613290 | None:intergenic | 50.0% | |
| CTCTGCTTATGTGTCGTGTC+TGG | - | chr3_2:86613385-86613404 | None:intergenic | 50.0% | |
| !!! | AGTTTTGGGGGACTTCAGTG+GGG | + | chr3_2:86613668-86613687 | Msa0433950:intron | 50.0% |
| CTGGAATATCCCTTGGAGGT+TGG | + | chr3_2:86614235-86614254 | Msa0433950:intron | 50.0% | |
| GGGCCATTGACAACGATAAG+TGG | + | chr3_2:86614510-86614529 | Msa0433950:CDS | 50.0% | |
| TGCAGTGGCTCGTGATGATT+TGG | + | chr3_2:86610151-86610170 | Msa0433950:intron | 50.0% | |
| GCAGTGGCTCGTGATGATTT+GGG | + | chr3_2:86610152-86610171 | Msa0433950:intron | 50.0% | |
| TTCTGAATCAGGTGTGGGAC+AGG | + | chr3_2:86610455-86610474 | Msa0433950:intron | 50.0% | |
| AGAGGACGTGGTGCAATTGA+TGG | - | chr3_2:86615223-86615242 | None:intergenic | 50.0% | |
| GATCTTCGGCACCTAGAGTT+AGG | - | chr3_2:86615483-86615502 | None:intergenic | 50.0% | |
| AAGGGGACACCTAGGATCTT+CGG | - | chr3_2:86615497-86615516 | None:intergenic | 50.0% | |
| TCACCGCGCAGATAATTTCC+AGG | + | chr3_2:86615567-86615586 | Msa0433950:CDS | 50.0% | |
| CTGACAGTCTGACTTATGCC+GGG | + | chr3_2:86616067-86616086 | Msa0433950:three_prime_UTR | 50.0% | |
| TGACAGTCTGACTTATGCCG+GGG | + | chr3_2:86616068-86616087 | Msa0433950:three_prime_UTR | 50.0% | |
| CCAGAAGAAGATACGGTGGG+TGG | - | chr3_2:86607407-86607426 | None:intergenic | 55.0% | |
| CCACCCACCGTATCTTCTTC+TGG | + | chr3_2:86607404-86607423 | Msa0433950:five_prime_UTR | 55.0% | |
| !!! | GCACGTGCAGTTTTGGGAGT+GGG | - | chr3_2:86607471-86607490 | None:intergenic | 55.0% |
| !!! | AGCACGTGCAGTTTTGGGAG+TGG | - | chr3_2:86607472-86607491 | None:intergenic | 55.0% |
| ! | CAGTTAGAGGAAGGCACGTG+TGG | - | chr3_2:86607507-86607526 | None:intergenic | 55.0% |
| TGAGCCTCAGCGATTATGGC+AGG | - | chr3_2:86607580-86607599 | None:intergenic | 55.0% | |
| CGTAACAGACGACCTCCTCA+AGG | + | chr3_2:86607685-86607704 | Msa0433950:CDS | 55.0% | |
| TGTCAGACCGCGAATGTTGG+TGG | + | chr3_2:86608512-86608531 | Msa0433950:intron | 55.0% | |
| GTTCCTTGATCTGGCAGGTG+TGG | + | chr3_2:86609284-86609303 | Msa0433950:intron | 55.0% | |
| GCTGTGGTTGCTCCTCTGAT+TGG | + | chr3_2:86609513-86609532 | Msa0433950:CDS | 55.0% | |
| !! | CCCAAGAGGGCAAGAGCATT+AGG | - | chr3_2:86610123-86610142 | None:intergenic | 55.0% |
| GATCCTAGGTGTCCTGTTGC+CGG | + | chr3_2:86610789-86610808 | Msa0433950:CDS | 55.0% | |
| AATCCGGCAACAGGACACCT+AGG | - | chr3_2:86610795-86610814 | None:intergenic | 55.0% | |
| TAGGTGTCCTGTTGCCGGAT+TGG | + | chr3_2:86610794-86610813 | Msa0433950:CDS | 55.0% | |
| TCCAACGGCAAAAGCAAGCC+AGG | + | chr3_2:86610821-86610840 | Msa0433950:CDS | 55.0% | |
| CGTAGCAGAAGACCTCCTCA+AGG | + | chr3_2:86612312-86612331 | Msa0433950:intron | 55.0% | |
| ATCTCTGCGTCCGTTGCTTG+AGG | + | chr3_2:86613075-86613094 | Msa0433950:CDS | 55.0% | |
| GTCGTGTCTGGTGTTTGTGC+CGG | - | chr3_2:86613373-86613392 | None:intergenic | 55.0% | |
| GTCCCATACCTGCCAGATCA+AGG | - | chr3_2:86614151-86614170 | None:intergenic | 55.0% | |
| !! | CTCTAGGTGCCGAAGATCCT+AGG | + | chr3_2:86615485-86615504 | Msa0433950:intron | 55.0% |
| GGAATTTCCAAGCCGGCAAG+GGG | - | chr3_2:86615514-86615533 | None:intergenic | 55.0% | |
| CGGAATTTCCAAGCCGGCAA+GGG | - | chr3_2:86615515-86615534 | None:intergenic | 55.0% | |
| TCGGAATTTCCAAGCCGGCA+AGG | - | chr3_2:86615516-86615535 | None:intergenic | 55.0% | |
| !! | TTGCCGGCTTGGAAATTCCG+AGG | + | chr3_2:86615515-86615534 | Msa0433950:CDS | 55.0% |
| !! | TGCCGGCTTGGAAATTCCGA+GGG | + | chr3_2:86615516-86615535 | Msa0433950:CDS | 55.0% |
| TGCCCTCGGAATTTCCAAGC+CGG | - | chr3_2:86615521-86615540 | None:intergenic | 55.0% | |
| GAGGAGGTCGTCTGTTACGG+AGG | - | chr3_2:86607684-86607703 | None:intergenic | 60.0% | |
| GTCCCACACCTGCCAGATCA+AGG | - | chr3_2:86609290-86609309 | None:intergenic | 60.0% | |
| GTGTGGGACAGGATTGCTCC+TGG | + | chr3_2:86610466-86610485 | Msa0433950:CDS | 60.0% | |
| !!! | GCCTGGCTTGCTTTTGCCGT+TGG | - | chr3_2:86610825-86610844 | None:intergenic | 60.0% |
| GAGGAGGTCTTCTGCTACGG+AGG | - | chr3_2:86612311-86612330 | None:intergenic | 60.0% | |
| CTCTCCTCCATCAGTGGACG+AGG | + | chr3_2:86612472-86612491 | Msa0433950:CDS | 60.0% | |
| GATCCTAGGTGTCCCCTTGC+CGG | + | chr3_2:86615499-86615518 | Msa0433950:CDS | 60.0% | |
| TCCGAGGGCAAAAGCAAGCC+AGG | + | chr3_2:86615531-86615550 | Msa0433950:CDS | 60.0% | |
| !!! | GCCTGGCTTGCTTTTGCCCT+CGG | - | chr3_2:86615535-86615554 | None:intergenic | 60.0% |
| GTGTGGGACAGGATCGCTCC+TGG | + | chr3_2:86615163-86615182 | Msa0433950:CDS | 65.0% | |
| AAGCCGGCAAGGGGACACCT+AGG | - | chr3_2:86615505-86615524 | None:intergenic | 65.0% | |
| ! | TAGGTGTCCCCTTGCCGGCT+TGG | + | chr3_2:86615504-86615523 | Msa0433950:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 86607301 | 86616155 | 86607301 | ID=Msa0433950;Name=Msa0433950 |
| chr3_2 | mRNA | 86607301 | 86616155 | 86607301 | ID=Msa0433950-mRNA-1;Parent=Msa0433950;Name=Msa0433950-mRNA-1;_AED=0.26;_eAED=0.26;_QI=144|0.73|0.75|1|0.78|0.75|24|190|670 |
| chr3_2 | exon | 86607301 | 86607706 | 86607301 | ID=Msa0433950-mRNA-1:exon:25088;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86607798 | 86607943 | 86607798 | ID=Msa0433950-mRNA-1:exon:25089;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86608019 | 86608150 | 86608019 | ID=Msa0433950-mRNA-1:exon:25090;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86608302 | 86608334 | 86608302 | ID=Msa0433950-mRNA-1:exon:25091;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86609301 | 86609391 | 86609301 | ID=Msa0433950-mRNA-1:exon:25092;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86609472 | 86609542 | 86609472 | ID=Msa0433950-mRNA-1:exon:25093;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86609632 | 86609701 | 86609632 | ID=Msa0433950-mRNA-1:exon:25094;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86610156 | 86610208 | 86610156 | ID=Msa0433950-mRNA-1:exon:25095;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86610466 | 86610562 | 86610466 | ID=Msa0433950-mRNA-1:exon:25096;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86610781 | 86610878 | 86610781 | ID=Msa0433950-mRNA-1:exon:25097;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86611071 | 86611174 | 86611071 | ID=Msa0433950-mRNA-1:exon:25098;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86612320 | 86612333 | 86612320 | ID=Msa0433950-mRNA-1:exon:25099;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86612432 | 86612493 | 86612432 | ID=Msa0433950-mRNA-1:exon:25100;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86612569 | 86612652 | 86612569 | ID=Msa0433950-mRNA-1:exon:25101;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86612965 | 86613096 | 86612965 | ID=Msa0433950-mRNA-1:exon:25102;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86614087 | 86614137 | 86614087 | ID=Msa0433950-mRNA-1:exon:25103;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86614162 | 86614252 | 86614162 | ID=Msa0433950-mRNA-1:exon:25104;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86614340 | 86614410 | 86614340 | ID=Msa0433950-mRNA-1:exon:25105;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86614500 | 86614569 | 86614500 | ID=Msa0433950-mRNA-1:exon:25106;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86615004 | 86615056 | 86615004 | ID=Msa0433950-mRNA-1:exon:25107;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86615163 | 86615184 | 86615163 | ID=Msa0433950-mRNA-1:exon:25108;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86615491 | 86615588 | 86615491 | ID=Msa0433950-mRNA-1:exon:25109;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86615818 | 86615938 | 86615818 | ID=Msa0433950-mRNA-1:exon:25110;Parent=Msa0433950-mRNA-1 |
| chr3_2 | exon | 86615979 | 86616155 | 86615979 | ID=Msa0433950-mRNA-1:exon:25111;Parent=Msa0433950-mRNA-1 |
| chr3_2 | five_prime_UTR | 86607301 | 86607444 | 86607301 | ID=Msa0433950-mRNA-1:five_prime_utr;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86607445 | 86607706 | 86607445 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86607798 | 86607943 | 86607798 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86608019 | 86608150 | 86608019 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86608302 | 86608334 | 86608302 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86609301 | 86609391 | 86609301 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86609472 | 86609542 | 86609472 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86609632 | 86609701 | 86609632 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86610156 | 86610208 | 86610156 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86610466 | 86610562 | 86610466 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86610781 | 86610878 | 86610781 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86611071 | 86611174 | 86611071 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86612320 | 86612333 | 86612320 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86612432 | 86612493 | 86612432 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86612569 | 86612652 | 86612569 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86612965 | 86613096 | 86612965 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86614087 | 86614137 | 86614087 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86614162 | 86614252 | 86614162 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86614340 | 86614410 | 86614340 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86614500 | 86614569 | 86614500 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86615004 | 86615056 | 86615004 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86615163 | 86615184 | 86615163 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86615491 | 86615588 | 86615491 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | CDS | 86615818 | 86615925 | 86615818 | ID=Msa0433950-mRNA-1:cds;Parent=Msa0433950-mRNA-1 |
| chr3_2 | three_prime_UTR | 86615926 | 86615938 | 86615926 | ID=Msa0433950-mRNA-1:three_prime_utr;Parent=Msa0433950-mRNA-1 |
| chr3_2 | three_prime_UTR | 86615979 | 86616155 | 86615979 | ID=Msa0433950-mRNA-1:three_prime_utr;Parent=Msa0433950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
