Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434670 | XP_003603701.1 | 91.254 | 343 | 12 | 4 | 1 | 333 | 1 | 335 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434670 | sp|Q9FGF0|PGML1_ARATH | 70.956 | 272 | 78 | 1 | 49 | 320 | 1 | 271 | 1.52e-145 | 414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434670 | G7J452 | 91.254 | 343 | 12 | 4 | 1 | 333 | 1 | 335 | 0.0 | 619 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0384600 | Msa0434670 | 0.861154 | 1.252459e-63 | -8.615850e-47 |
| Msa0434670 | Msa0478440 | 0.821090 | 4.856097e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434670 | MtrunA17_Chr3g0141101 | 91.254 | 343 | 12 | 4 | 1 | 333 | 1 | 335 | 0.0 | 619 |
| Msa0434670 | MtrunA17_Chr5g0428091 | 75.812 | 277 | 65 | 2 | 47 | 323 | 37 | 311 | 1.08e-156 | 441 |
| Msa0434670 | MtrunA17_Chr4g0049431 | 69.258 | 283 | 85 | 2 | 49 | 330 | 1 | 282 | 4.04e-146 | 413 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434670 | AT5G64460.4 | 70.956 | 272 | 78 | 1 | 49 | 320 | 1 | 271 | 1.55e-146 | 414 |
| Msa0434670 | AT5G64460.6 | 70.956 | 272 | 78 | 1 | 49 | 320 | 1 | 271 | 1.55e-146 | 414 |
| Msa0434670 | AT5G64460.10 | 70.956 | 272 | 78 | 1 | 49 | 320 | 1 | 271 | 1.55e-146 | 414 |
| Msa0434670 | AT5G64460.2 | 70.956 | 272 | 78 | 1 | 49 | 320 | 1 | 271 | 1.55e-146 | 414 |
| Msa0434670 | AT5G64460.1 | 70.956 | 272 | 78 | 1 | 49 | 320 | 1 | 271 | 1.55e-146 | 414 |
| Msa0434670 | AT5G64460.8 | 70.956 | 272 | 78 | 1 | 49 | 320 | 1 | 271 | 1.55e-146 | 414 |
| Msa0434670 | AT5G64460.3 | 70.956 | 272 | 78 | 1 | 49 | 320 | 1 | 271 | 1.55e-146 | 414 |
| Msa0434670 | AT1G58280.1 | 64.430 | 298 | 102 | 2 | 28 | 325 | 25 | 318 | 1.83e-139 | 398 |
| Msa0434670 | AT1G58280.3 | 66.906 | 278 | 91 | 1 | 48 | 325 | 27 | 303 | 3.93e-139 | 396 |
| Msa0434670 | AT1G58280.4 | 66.906 | 278 | 91 | 1 | 48 | 325 | 26 | 302 | 5.33e-139 | 396 |
| Msa0434670 | AT1G58280.2 | 59.443 | 323 | 102 | 3 | 28 | 325 | 25 | 343 | 1.85e-133 | 384 |
| Msa0434670 | AT2G17280.1 | 66.920 | 263 | 86 | 1 | 58 | 319 | 8 | 270 | 3.55e-133 | 380 |
| Msa0434670 | AT2G17280.2 | 66.920 | 263 | 86 | 1 | 58 | 319 | 8 | 270 | 3.55e-133 | 380 |
| Msa0434670 | AT5G64460.11 | 71.552 | 232 | 66 | 0 | 89 | 320 | 1 | 232 | 1.49e-124 | 357 |
| Msa0434670 | AT5G64460.7 | 71.552 | 232 | 66 | 0 | 89 | 320 | 1 | 232 | 1.49e-124 | 357 |
| Msa0434670 | AT5G64460.9 | 71.552 | 232 | 66 | 0 | 89 | 320 | 1 | 232 | 1.49e-124 | 357 |
| Msa0434670 | AT5G64460.5 | 71.053 | 190 | 55 | 0 | 131 | 320 | 1 | 190 | 7.84e-101 | 295 |
| Msa0434670 | AT1G09935.1 | 52.632 | 247 | 97 | 1 | 57 | 303 | 5 | 231 | 8.54e-90 | 268 |
| Msa0434670 | AT1G09935.2 | 52.479 | 242 | 95 | 1 | 57 | 298 | 5 | 226 | 1.98e-88 | 265 |
| Msa0434670 | AT1G09932.3 | 44.939 | 247 | 122 | 1 | 49 | 295 | 1 | 233 | 2.75e-67 | 211 |
| Msa0434670 | AT1G09932.1 | 45.082 | 244 | 120 | 1 | 49 | 292 | 1 | 230 | 1.07e-66 | 211 |
| Msa0434670 | AT1G09932.2 | 45.740 | 223 | 107 | 1 | 70 | 292 | 15 | 223 | 9.38e-63 | 200 |
| Msa0434670 | AT1G09932.4 | 40.164 | 244 | 107 | 2 | 49 | 292 | 1 | 205 | 7.69e-50 | 166 |
Find 105 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATACTCTAAGTGCTTT+TGG | 0.193794 | 3_2:+87641384 | Msa0434670:CDS |
| GTTGCTGACGAGAAACTTTC+TGG | 0.194341 | 3_2:+87641984 | Msa0434670:CDS |
| CAATTGCCGGAAACATATTT+TGG | 0.207388 | 3_2:-87640442 | None:intergenic |
| GCCATTGATGAATGTTAAAT+TGG | 0.230649 | 3_2:-87642114 | None:intergenic |
| TATTTACTTCCCTTCTTTCT+AGG | 0.234668 | 3_2:-87642237 | None:intergenic |
| CATCATGTTTGTTACTTTGA+TGG | 0.261267 | 3_2:-87642014 | None:intergenic |
| CAAACAGCAGTTGGAGTCTT+TGG | 0.272032 | 3_2:+87639504 | Msa0434670:CDS |
| TTCCAAAAGCACTTAGAGTA+TGG | 0.295883 | 3_2:-87641386 | None:intergenic |
| TCATTCTTCTCTCTAATATC+AGG | 0.303717 | 3_2:-87640645 | None:intergenic |
| AGTATTGGTGGTAGCCAAAA+AGG | 0.304949 | 3_2:+87642268 | Msa0434670:three_prime_UTR |
| AATTATATGCTGATTTGATT+TGG | 0.310510 | 3_2:-87637000 | None:intergenic |
| CTTTACTAAAACCATATAAC+TGG | 0.314598 | 3_2:-87642046 | None:intergenic |
| GAGAAAACGGGAAGAGAATA+AGG | 0.327149 | 3_2:-87642180 | None:intergenic |
| TGAGTACCAAAATATGTTTC+CGG | 0.340527 | 3_2:+87640436 | Msa0434670:CDS |
| GCAGATATGGATACTTCTTC+AGG | 0.355326 | 3_2:+87637886 | Msa0434670:intron |
| GTTCTTGTTTAATAAAATAG+TGG | 0.400783 | 3_2:-87637094 | None:intergenic |
| AGAGCTTTGCCGCGAGCATT+TGG | 0.411847 | 3_2:+87639638 | Msa0434670:CDS |
| TAAAATGTATCATGAGAAAA+CGG | 0.412455 | 3_2:-87642193 | None:intergenic |
| TTGTGATGTGGGGATAAAAC+TGG | 0.428958 | 3_2:-87637124 | None:intergenic |
| TCATACGATAAGTACGCATC+AGG | 0.429296 | 3_2:-87638099 | None:intergenic |
| GGATGGCGAGGTTGTGATGT+GGG | 0.433869 | 3_2:-87637135 | None:intergenic |
| TTCAGTGGTCATCATTGATA+GGG | 0.433878 | 3_2:+87641800 | Msa0434670:CDS |
| GTTCAGTGGTCATCATTGAT+AGG | 0.440836 | 3_2:+87641799 | Msa0434670:CDS |
| CTTCAACATTGTGAAACCCT+TGG | 0.441453 | 3_2:-87638065 | None:intergenic |
| CAAGTCTCACCCCTCTCGGC+TGG | 0.443047 | 3_2:+87638133 | Msa0434670:CDS |
| GAGTCCTCTACCAACTTTCC+TGG | 0.444606 | 3_2:+87641927 | Msa0434670:CDS |
| ATTTACTTCCCTTCTTTCTA+GGG | 0.445222 | 3_2:-87642236 | None:intergenic |
| TCCAATTTAACATTCATCAA+TGG | 0.461919 | 3_2:+87642113 | Msa0434670:three_prime_UTR |
| TACAACGGTGCAACGGGTAA+AGG | 0.462790 | 3_2:-87637918 | None:intergenic |
| TTCAACATTGTGAAACCCTT+GGG | 0.465042 | 3_2:-87638064 | None:intergenic |
| CTTCTTTCACCCTAGAAAGA+AGG | 0.465149 | 3_2:+87642227 | Msa0434670:three_prime_UTR |
| AGAATGAAGAAGTTGCTGCC+AGG | 0.468158 | 3_2:+87640661 | Msa0434670:CDS |
| CACCCCTCTCGGCTGGAAGC+AGG | 0.471269 | 3_2:+87638140 | Msa0434670:CDS |
| CTTTCCTGGCAAAATTCCAC+AGG | 0.484324 | 3_2:+87641941 | Msa0434670:CDS |
| CAAGGGTTTCACAATGTTGA+AGG | 0.484805 | 3_2:+87638066 | Msa0434670:CDS |
| GATGCAAGTCTCACCCCTCT+CGG | 0.486259 | 3_2:+87638129 | Msa0434670:CDS |
| TAGAGTAATGCTTACTAGTA+CGG | 0.487552 | 3_2:+87642340 | Msa0434670:three_prime_UTR |
| TTGCTGACGAGAAACTTTCT+GGG | 0.489770 | 3_2:+87641985 | Msa0434670:CDS |
| TTTCTCGTCAGCAACATCAC+TGG | 0.499214 | 3_2:-87641976 | None:intergenic |
| GACTCCAACTGCTGTTTGCA+TGG | 0.504794 | 3_2:-87639499 | None:intergenic |
| GTAAATATCTGTGAAAGTAT+TGG | 0.508955 | 3_2:+87642253 | Msa0434670:three_prime_UTR |
| AAAATGTATCATGAGAAAAC+GGG | 0.512482 | 3_2:-87642192 | None:intergenic |
| GACGAGAAACTTTCTGGGAG+TGG | 0.517322 | 3_2:+87641990 | Msa0434670:CDS |
| GAAGATACGCGAAGTGAATG+TGG | 0.521298 | 3_2:-87637177 | None:intergenic |
| CTTCTTTCTAGGGTGAAAGA+AGG | 0.522353 | 3_2:-87642226 | None:intergenic |
| GTTATGGACACGCAAAGAAA+AGG | 0.523784 | 3_2:+87641329 | Msa0434670:CDS |
| CCGTTGTAAAACTCTTCACC+TGG | 0.524813 | 3_2:+87637933 | Msa0434670:CDS |
| GAATGAAGAAGTTGCTGCCA+GGG | 0.525220 | 3_2:+87640662 | Msa0434670:CDS |
| CAAAGCTCTACTGCTACAAA+TGG | 0.525638 | 3_2:-87639624 | None:intergenic |
| AACGTTGAGATACGCGGGGA+TGG | 0.527877 | 3_2:-87637152 | None:intergenic |
| TGTGGTGGTGCTGTTATAGT+TGG | 0.528369 | 3_2:-87637069 | None:intergenic |
| TTCTCGTCAGCAACATCACT+GGG | 0.530667 | 3_2:-87641975 | None:intergenic |
| TTCTTTCACCCTAGAAAGAA+GGG | 0.535795 | 3_2:+87642228 | Msa0434670:three_prime_UTR |
| TAATCTGAGAGAGCATGTTA+AGG | 0.541064 | 3_2:+87638405 | Msa0434670:CDS |
| CAAAATCGGAGCCATGGTAA+AGG | 0.543335 | 3_2:+87642295 | Msa0434670:three_prime_UTR |
| AATATCTGTGAAAGTATTGG+TGG | 0.546036 | 3_2:+87642256 | Msa0434670:three_prime_UTR |
| ACAGCAGTTGGAGTCTTTGG+TGG | 0.550104 | 3_2:+87639507 | Msa0434670:CDS |
| AGTTGGAGTCTTTGGTGGTG+AGG | 0.551014 | 3_2:+87639512 | Msa0434670:CDS |
| GGCAATCAAAATCGGAGCCA+TGG | 0.552136 | 3_2:+87642289 | Msa0434670:three_prime_UTR |
| ACGAGAAACTTTCTGGGAGT+GGG | 0.556422 | 3_2:+87641991 | Msa0434670:CDS |
| GGGATGGCGAGGTTGTGATG+TGG | 0.556583 | 3_2:-87637136 | None:intergenic |
| TGGTGCTGTTATAGTTGGCA+TGG | 0.557569 | 3_2:-87637064 | None:intergenic |
| CTTCGCGTATCTTCTCGCTC+AGG | 0.567075 | 3_2:+87637186 | Msa0434670:CDS |
| TTACCTGCTTCCAGCCGAGA+GGG | 0.567288 | 3_2:-87638143 | None:intergenic |
| TTTGCCAGGAAAGTTGGTAG+AGG | 0.574696 | 3_2:-87641931 | None:intergenic |
| TGGAGAACGTTGAGATACGC+GGG | 0.576761 | 3_2:-87637157 | None:intergenic |
| TTTAATAAAATAGTGGAATG+TGG | 0.579461 | 3_2:-87637087 | None:intergenic |
| GTGGAGAACGTTGAGATACG+CGG | 0.579514 | 3_2:-87637158 | None:intergenic |
| ACATTCTCATTCATCAGAGG+AGG | 0.587925 | 3_2:-87639558 | None:intergenic |
| TCCTCTGATGAATGAGAATG+TGG | 0.595062 | 3_2:+87639560 | Msa0434670:CDS |
| ATTGCTGTTGTTAGCCACAG+TGG | 0.597876 | 3_2:+87641354 | Msa0434670:CDS |
| GGTGGTGAGGCACACACTGA+TGG | 0.600230 | 3_2:+87639525 | Msa0434670:CDS |
| CATTCTCATTCATCAGAGGA+GGG | 0.600745 | 3_2:-87639557 | None:intergenic |
| TGAGATACGCGGGGATGGCG+AGG | 0.600976 | 3_2:-87637147 | None:intergenic |
| TCCACATTCTCATTCATCAG+AGG | 0.604283 | 3_2:-87639561 | None:intergenic |
| AGGACCATGCAAACAGCAGT+TGG | 0.604452 | 3_2:+87639495 | Msa0434670:intron |
| CAACATCACTGGGAAGGTCA+AGG | 0.605658 | 3_2:-87641965 | None:intergenic |
| CATCCTTGTGATAAGAGAAG+AGG | 0.612650 | 3_2:+87640407 | Msa0434670:CDS |
| TCAGTGGTCATCATTGATAG+GGG | 0.614829 | 3_2:+87641801 | Msa0434670:CDS |
| AGAGAGCATGTTAAGGCAAG+CGG | 0.615902 | 3_2:+87638412 | Msa0434670:CDS |
| ATTCTCATTCATCAGAGGAG+GGG | 0.621059 | 3_2:-87639556 | None:intergenic |
| GATGGCGAGGTTGTGATGTG+GGG | 0.621773 | 3_2:-87637134 | None:intergenic |
| CGTCAGCAACATCACTGGGA+AGG | 0.624278 | 3_2:-87641971 | None:intergenic |
| AGCTCTACTGCTACAAATGG+TGG | 0.625499 | 3_2:-87639621 | None:intergenic |
| ATGCAGGTTAGACATGCCCA+AGG | 0.629064 | 3_2:+87638048 | Msa0434670:intron |
| TATACTTATACCTCAACAAG+GGG | 0.629628 | 3_2:-87638468 | None:intergenic |
| TTATACTTATACCTCAACAA+GGG | 0.644569 | 3_2:-87638469 | None:intergenic |
| GTTATACTTATACCTCAACA+AGG | 0.644699 | 3_2:-87638470 | None:intergenic |
| TACCTGCTTCCAGCCGAGAG+GGG | 0.644968 | 3_2:-87638142 | None:intergenic |
| CTGGGAAGGTCAAGGCCCTG+TGG | 0.647778 | 3_2:-87641957 | None:intergenic |
| TGCAGGTTAGACATGCCCAA+GGG | 0.651450 | 3_2:+87638049 | Msa0434670:intron |
| ATGCCTCTTCTCTTATCACA+AGG | 0.652179 | 3_2:-87640410 | None:intergenic |
| TAATTGTGAGCTGCGTTCAG+TGG | 0.658742 | 3_2:+87641785 | Msa0434670:CDS |
| CATACGATAAGTACGCATCA+GGG | 0.659486 | 3_2:-87638098 | None:intergenic |
| AATGAAGAAGTTGCTGCCAG+GGG | 0.664314 | 3_2:+87640663 | Msa0434670:CDS |
| TTTCCTGGCAAAATTCCACA+GGG | 0.673235 | 3_2:+87641942 | Msa0434670:CDS |
| CAGTGGTCATCATTGATAGG+GGG | 0.678974 | 3_2:+87641802 | Msa0434670:CDS |
| ATTACCTGCTTCCAGCCGAG+AGG | 0.685732 | 3_2:-87638144 | None:intergenic |
| AATAAAATAGTGGAATGTGG+TGG | 0.696828 | 3_2:-87637084 | None:intergenic |
| CACCACATACCAAATGCTCG+CGG | 0.697669 | 3_2:-87639647 | None:intergenic |
| AGGGTGAAAGAAGGTGCCAG+AGG | 0.702493 | 3_2:-87642217 | None:intergenic |
| TGTTTAGATAGAGCGCGATG+AGG | 0.707425 | 3_2:+87640608 | Msa0434670:intron |
| GGAGAACGTTGAGATACGCG+GGG | 0.751908 | 3_2:-87637156 | None:intergenic |
| ATACTTATACCTCAACAAGG+GGG | 0.782295 | 3_2:-87638467 | None:intergenic |
| TATGGAATAGAAAACCACTG+TGG | 0.804378 | 3_2:-87641368 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTATTTTATAAAAAGTAAT+TGG | + | chr3_2:87640325-87640344 | Msa0434670:intron | 10.0% |
| !! | TTTGCATTTAATTATTTCAA+TGG | - | chr3_2:87637499-87637518 | None:intergenic | 15.0% |
| !! | ACTAATATAACATTCAAAAT+TGG | + | chr3_2:87637594-87637613 | Msa0434670:intron | 15.0% |
| !!! | AATAACTAGTTCAATTTTTT+TGG | - | chr3_2:87638443-87638462 | None:intergenic | 15.0% |
| !! | AGTATAACTTTATTGTAATT+TGG | + | chr3_2:87638485-87638504 | Msa0434670:intron | 15.0% |
| !! | AGTAAATTAGTAACAAAATT+AGG | - | chr3_2:87638517-87638536 | None:intergenic | 15.0% |
| !! | TATTAAACATAAAACTGTAT+GGG | - | chr3_2:87639327-87639346 | None:intergenic | 15.0% |
| !! | ATATTAAACATAAAACTGTA+TGG | - | chr3_2:87639328-87639347 | None:intergenic | 15.0% |
| !!! | TTTTATAAAATAAGCAAGAA+AGG | - | chr3_2:87640319-87640338 | None:intergenic | 15.0% |
| !! | GAAAAAAAATCACATTATTA+TGG | + | chr3_2:87640809-87640828 | Msa0434670:intron | 15.0% |
| !! | ACACATAATTAATAATAAGA+CGG | + | chr3_2:87641518-87641537 | Msa0434670:intron | 15.0% |
| !!! | AATTATATGCTGATTTGATT+TGG | - | chr3_2:87637003-87637022 | None:intergenic | 20.0% |
| !!! | TTTAATAAAATAGTGGAATG+TGG | - | chr3_2:87637090-87637109 | None:intergenic | 20.0% |
| !!! | GTTCTTGTTTAATAAAATAG+TGG | - | chr3_2:87637097-87637116 | None:intergenic | 20.0% |
| !!! | TATTCCAGGTTAATTTTTAA+TGG | + | chr3_2:87638350-87638369 | Msa0434670:intron | 20.0% |
| !!! | ATTTTCTGTTATAAAAGAGA+GGG | + | chr3_2:87638709-87638728 | Msa0434670:intron | 20.0% |
| !!! | TTGTTGTTTCATTTCATATA+TGG | - | chr3_2:87639049-87639068 | None:intergenic | 20.0% |
| !!! | ACAGTTTTATGTTTAATATG+TGG | + | chr3_2:87639329-87639348 | Msa0434670:intron | 20.0% |
| !!! | CTCTTTAAAGCATTTATAAA+GGG | - | chr3_2:87639755-87639774 | None:intergenic | 20.0% |
| !!! | CTTTATAAATGCTTTAAAGA+GGG | + | chr3_2:87639754-87639773 | Msa0434670:intron | 20.0% |
| !! | TCCTAATTAATTAACAAAGA+AGG | - | chr3_2:87639858-87639877 | None:intergenic | 20.0% |
| !! | TAAAATAAAGCAAAGTGAAT+TGG | - | chr3_2:87639976-87639995 | None:intergenic | 20.0% |
| !!! | AGTTAGTTTGAGTATTTTTA+TGG | + | chr3_2:87640363-87640382 | Msa0434670:intron | 20.0% |
| !!! | AGTCTTATTGAAAAAGAAAT+AGG | + | chr3_2:87640762-87640781 | Msa0434670:intron | 20.0% |
| !!! | GTCTTATTGAAAAAGAAATA+GGG | + | chr3_2:87640763-87640782 | Msa0434670:intron | 20.0% |
| !!! | AAACAAGAGGTAAATTTTTA+TGG | - | chr3_2:87640987-87641006 | None:intergenic | 20.0% |
| !! | TTGAAACAAATAGTTGTATT+AGG | + | chr3_2:87641262-87641281 | Msa0434670:intron | 20.0% |
| !!! | ATAAGACGGTTTTTTTTTTT+TGG | + | chr3_2:87641532-87641551 | Msa0434670:intron | 20.0% |
| !!! | GTTTGATTTTAATTTGTTGT+TGG | + | chr3_2:87641626-87641645 | Msa0434670:intron | 20.0% |
| !! | GTATAAGTTATTCTGTAAAT+AGG | - | chr3_2:87641839-87641858 | None:intergenic | 20.0% |
| !!! | TTTTGTGTATTCATTTTTAC+AGG | + | chr3_2:87641889-87641908 | Msa0434670:intron | 20.0% |
| !! | TGTTTACATGTAAAAATCAA+TGG | - | chr3_2:87642139-87642158 | None:intergenic | 20.0% |
| !! | TAAAATGTATCATGAGAAAA+CGG | - | chr3_2:87642196-87642215 | None:intergenic | 20.0% |
| ! | TGATCTAATTAAGCAAAGAA+GGG | - | chr3_2:87637284-87637303 | None:intergenic | 25.0% |
| ! | TTGATCTAATTAAGCAAAGA+AGG | - | chr3_2:87637285-87637304 | None:intergenic | 25.0% |
| ! | TGTTCAAGAAGACAATATAT+GGG | + | chr3_2:87637703-87637722 | Msa0434670:intron | 25.0% |
| !! | TTGAGAAAATCATTTTCTTG+TGG | + | chr3_2:87638009-87638028 | Msa0434670:intron | 25.0% |
| ! | AAAATTAACCTGGAATATTG+CGG | - | chr3_2:87638347-87638366 | None:intergenic | 25.0% |
| ! | TTATACTTATACCTCAACAA+GGG | - | chr3_2:87638472-87638491 | None:intergenic | 25.0% |
| !! | GATTTTCTGTTATAAAAGAG+AGG | + | chr3_2:87638708-87638727 | Msa0434670:intron | 25.0% |
| !! | TTTTCTGTTATAAAAGAGAG+GGG | + | chr3_2:87638710-87638729 | Msa0434670:intron | 25.0% |
| ! | TTGACAAATATTGTTAGAGT+TGG | + | chr3_2:87638751-87638770 | Msa0434670:intron | 25.0% |
| !! | AAATATTGTTAGAGTTGGTT+AGG | + | chr3_2:87638756-87638775 | Msa0434670:intron | 25.0% |
| ! | AACAACTATATATCATGGAA+TGG | - | chr3_2:87638894-87638913 | None:intergenic | 25.0% |
| ! | CAAGAAACAACTATATATCA+TGG | - | chr3_2:87638899-87638918 | None:intergenic | 25.0% |
| !!! | ATAGTTGTTTCTTGACTTTA+CGG | + | chr3_2:87638905-87638924 | Msa0434670:intron | 25.0% |
| ! | AAGAGTCATAAACTAGATAT+TGG | - | chr3_2:87639143-87639162 | None:intergenic | 25.0% |
| ! | ATAAGCTCAATCATATTTGA+GGG | - | chr3_2:87639290-87639309 | None:intergenic | 25.0% |
| ! | TATAAGCTCAATCATATTTG+AGG | - | chr3_2:87639291-87639310 | None:intergenic | 25.0% |
| !!! | TCCTCTAGATTATTTTTTTC+CGG | + | chr3_2:87639435-87639454 | Msa0434670:intron | 25.0% |
| ! | ATTGCTAAATATTTCATTGC+AGG | + | chr3_2:87639475-87639494 | Msa0434670:intron | 25.0% |
| !! | AATTTTATTGCTTTGCAGTT+TGG | + | chr3_2:87639675-87639694 | Msa0434670:intron | 25.0% |
| !! | TTTAAAGCATTTATAAAGGG+AGG | - | chr3_2:87639752-87639771 | None:intergenic | 25.0% |
| !!! | CCTCTTTAAAGCATTTATAA+AGG | - | chr3_2:87639756-87639775 | None:intergenic | 25.0% |
| !!! | CCTTTATAAATGCTTTAAAG+AGG | + | chr3_2:87639753-87639772 | Msa0434670:intron | 25.0% |
| ! | GAAATGCTTAAATTACATGT+AGG | + | chr3_2:87639809-87639828 | Msa0434670:intron | 25.0% |
| ! | GCCTTCTTTGTTAATTAATT+AGG | + | chr3_2:87639854-87639873 | Msa0434670:intron | 25.0% |
| ! | GGATTAAGGAGTAAAATTAA+GGG | - | chr3_2:87639955-87639974 | None:intergenic | 25.0% |
| ! | TGGATTAAGGAGTAAAATTA+AGG | - | chr3_2:87639956-87639975 | None:intergenic | 25.0% |
| !!! | ACCATATTTCTAGTTAATGT+GGG | - | chr3_2:87640096-87640115 | None:intergenic | 25.0% |
| !!! | TACCATATTTCTAGTTAATG+TGG | - | chr3_2:87640097-87640116 | None:intergenic | 25.0% |
| !!! | TTAGATTTTGGATTTGAGTT+TGG | + | chr3_2:87640159-87640178 | Msa0434670:intron | 25.0% |
| !!! | TAGATTTTGGATTTGAGTTT+GGG | + | chr3_2:87640160-87640179 | Msa0434670:intron | 25.0% |
| !! | ATTTTCCAGATTTTCTCAAT+CGG | + | chr3_2:87640203-87640222 | Msa0434670:intron | 25.0% |
| ! | AGTGACTAGATTATTAGATT+AGG | + | chr3_2:87640242-87640261 | Msa0434670:intron | 25.0% |
| ! | TATAAAATAAGCAAGAAAGG+AGG | - | chr3_2:87640316-87640335 | None:intergenic | 25.0% |
| !! | ATTTGTTGGTAAGTTATGAA+TGG | + | chr3_2:87640548-87640567 | Msa0434670:intron | 25.0% |
| ! | AAATCACATTATTATGGTTG+AGG | + | chr3_2:87640815-87640834 | Msa0434670:intron | 25.0% |
| ! | ATTGGTTAAGAGGTAATAAA+AGG | + | chr3_2:87640891-87640910 | Msa0434670:intron | 25.0% |
| ! | TTTACTATGTTGCTCTTATA+CGG | + | chr3_2:87641074-87641093 | Msa0434670:intron | 25.0% |
| ! | TATACGGAATATTTATGAGT+TGG | + | chr3_2:87641090-87641109 | Msa0434670:intron | 25.0% |
| ! | TTCTATTCATATCTCTGTAT+TGG | + | chr3_2:87641301-87641320 | Msa0434670:intron | 25.0% |
| ! | GAATTATCACATTCACATTT+CGG | + | chr3_2:87641487-87641506 | Msa0434670:intron | 25.0% |
| !!! | AATTTGCTAATGAACACTAA+AGG | + | chr3_2:87641562-87641581 | Msa0434670:intron | 25.0% |
| ! | TTTACTCAAAGGATTTCAAT+CGG | - | chr3_2:87641589-87641608 | None:intergenic | 25.0% |
| ! | AAATCCTTTGAGTAAAAAAC+TGG | + | chr3_2:87641593-87641612 | Msa0434670:intron | 25.0% |
| !! | TTTTCCAGTTTTTTACTCAA+AGG | - | chr3_2:87641600-87641619 | None:intergenic | 25.0% |
| ! | TTAAAAGTCCAATACAAGAA+AGG | - | chr3_2:87641728-87641747 | None:intergenic | 25.0% |
| ! | AAGTTATTCTGTAAATAGGA+TGG | - | chr3_2:87641835-87641854 | None:intergenic | 25.0% |
| !!! | ATTCATTTTTACAGGATGAT+TGG | + | chr3_2:87641897-87641916 | Msa0434670:intron | 25.0% |
| ! | CTTTACTAAAACCATATAAC+TGG | - | chr3_2:87642049-87642068 | None:intergenic | 25.0% |
| ! | TCCAATTTAACATTCATCAA+TGG | + | chr3_2:87642113-87642132 | Msa0434670:three_prime_UTR | 25.0% |
| ! | AAAATGTATCATGAGAAAAC+GGG | - | chr3_2:87642195-87642214 | None:intergenic | 25.0% |
| !! | GTAAATATCTGTGAAAGTAT+TGG | + | chr3_2:87642253-87642272 | Msa0434670:three_prime_UTR | 25.0% |
| !!! | TTTTAAAACTACCTTTACCA+TGG | - | chr3_2:87642309-87642328 | None:intergenic | 25.0% |
| ! | AATAAAATAGTGGAATGTGG+TGG | - | chr3_2:87637087-87637106 | None:intergenic | 30.0% |
| ! | AAGCAAATCATCGATTAAAC+TGG | - | chr3_2:87637395-87637414 | None:intergenic | 30.0% |
| CTGTTCAAGAAGACAATATA+TGG | + | chr3_2:87637702-87637721 | Msa0434670:intron | 30.0% | |
| GCAGATATAGTGATATACTA+AGG | - | chr3_2:87638247-87638266 | None:intergenic | 30.0% | |
| AAATTAACCTGGAATATTGC+GGG | - | chr3_2:87638346-87638365 | None:intergenic | 30.0% | |
| ! | TCCAGGTTAATTTTTAATGG+TGG | + | chr3_2:87638353-87638372 | Msa0434670:intron | 30.0% |
| TCCACCATTAAAAATTAACC+TGG | - | chr3_2:87638357-87638376 | None:intergenic | 30.0% | |
| ! | TATTTGTTGCTCTATATGAC+AGG | + | chr3_2:87638378-87638397 | Msa0434670:intron | 30.0% |
| TATACTTATACCTCAACAAG+GGG | - | chr3_2:87638471-87638490 | None:intergenic | 30.0% | |
| GTTATACTTATACCTCAACA+AGG | - | chr3_2:87638473-87638492 | None:intergenic | 30.0% | |
| GTCAAAGATTTGTGACTTAT+TGG | + | chr3_2:87638547-87638566 | Msa0434670:intron | 30.0% | |
| ATGTGTATAAGAAGTCTGAT+AGG | + | chr3_2:87638605-87638624 | Msa0434670:intron | 30.0% | |
| AACAGAAAATCCCCTAAATT+CGG | - | chr3_2:87638699-87638718 | None:intergenic | 30.0% | |
| !! | TAGTTGTTTCTTGACTTTAC+GGG | + | chr3_2:87638906-87638925 | Msa0434670:intron | 30.0% |
| GATTTGTAAAGGACTTTGAT+AGG | - | chr3_2:87638983-87639002 | None:intergenic | 30.0% | |
| ATCAAAGTCCTTTACAAATC+AGG | + | chr3_2:87638983-87639002 | Msa0434670:intron | 30.0% | |
| ! | CGATTATTCCTGATTTGTAA+AGG | - | chr3_2:87638994-87639013 | None:intergenic | 30.0% |
| ATTGCAGAATCGAACATAAA+TGG | + | chr3_2:87639023-87639042 | Msa0434670:intron | 30.0% | |
| ! | TTTAGAGTTTCATTCATCCT+AGG | - | chr3_2:87639113-87639132 | None:intergenic | 30.0% |
| ATGATTGAGCTTATAAAGAG+TGG | + | chr3_2:87639296-87639315 | Msa0434670:intron | 30.0% | |
| ACCGGAAAAAAATAATCTAG+AGG | - | chr3_2:87639439-87639458 | None:intergenic | 30.0% | |
| !!! | TCTAGATTATTTTTTTCCGG+TGG | + | chr3_2:87639438-87639457 | Msa0434670:intron | 30.0% |
| TAACAAAGAAGGCTTAAAGA+TGG | - | chr3_2:87639847-87639866 | None:intergenic | 30.0% | |
| AAGCAAAGTGAATTGGATTA+AGG | - | chr3_2:87639969-87639988 | None:intergenic | 30.0% | |
| CAAACTATTGTACATGACTT+TGG | - | chr3_2:87640014-87640033 | None:intergenic | 30.0% | |
| AGTCATGTACAATAGTTTGA+AGG | + | chr3_2:87640015-87640034 | Msa0434670:intron | 30.0% | |
| TCCCACATTAACTAGAAATA+TGG | + | chr3_2:87640092-87640111 | Msa0434670:intron | 30.0% | |
| AAGTAGTCCTTATATAACTC+AGG | + | chr3_2:87640118-87640137 | Msa0434670:intron | 30.0% | |
| AGAATTGCCTGAGTTATATA+AGG | - | chr3_2:87640128-87640147 | None:intergenic | 30.0% | |
| AATCCAAAATCTAACTCAAG+TGG | - | chr3_2:87640153-87640172 | None:intergenic | 30.0% | |
| AGAAAATCTGGAAAATCCTT+GGG | - | chr3_2:87640199-87640218 | None:intergenic | 30.0% | |
| TGAGTACCAAAATATGTTTC+CGG | + | chr3_2:87640436-87640455 | Msa0434670:CDS | 30.0% | |
| !! | ATTGATTTTTCACTGGTAAG+TGG | + | chr3_2:87640461-87640480 | Msa0434670:intron | 30.0% |
| ! | TTTTGTTCTGATGCATTTGT+TGG | + | chr3_2:87640534-87640553 | Msa0434670:intron | 30.0% |
| GGTAAGTTATGAATGGTATT+TGG | + | chr3_2:87640555-87640574 | Msa0434670:intron | 30.0% | |
| TCATTCTTCTCTCTAATATC+AGG | - | chr3_2:87640648-87640667 | None:intergenic | 30.0% | |
| CATTATTATGGTTGAGGTTT+AGG | + | chr3_2:87640821-87640840 | Msa0434670:intron | 30.0% | |
| ! | CTTTTCCTTAGGGTAATTTA+GGG | + | chr3_2:87640849-87640868 | Msa0434670:intron | 30.0% |
| TATTACCCTAAATTACCCTA+AGG | - | chr3_2:87640857-87640876 | None:intergenic | 30.0% | |
| CCTTTCTGACGAATAAAAAA+AGG | - | chr3_2:87641047-87641066 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTTATTCGTCAGAA+AGG | + | chr3_2:87641044-87641063 | Msa0434670:intron | 30.0% |
| ! | GGAATATTTATGAGTTGGAT+AGG | + | chr3_2:87641095-87641114 | Msa0434670:intron | 30.0% |
| ! | TTATGAGTTGGATAGGAATA+TGG | + | chr3_2:87641102-87641121 | Msa0434670:intron | 30.0% |
| AGACATTCAGATTATGCATA+TGG | + | chr3_2:87641229-87641248 | Msa0434670:intron | 30.0% | |
| ATAGTTGTATTAGGCCATAA+TGG | + | chr3_2:87641271-87641290 | Msa0434670:intron | 30.0% | |
| AATAGAACACATGACCATTA+TGG | - | chr3_2:87641288-87641307 | None:intergenic | 30.0% | |
| !! | CATCATGTTTGTTACTTTGA+TGG | - | chr3_2:87642017-87642036 | None:intergenic | 30.0% |
| GCCATTGATGAATGTTAAAT+TGG | - | chr3_2:87642117-87642136 | None:intergenic | 30.0% | |
| !! | TCATGATACATTTTAACCTC+TGG | + | chr3_2:87642201-87642220 | Msa0434670:three_prime_UTR | 30.0% |
| ATTTACTTCCCTTCTTTCTA+GGG | - | chr3_2:87642239-87642258 | None:intergenic | 30.0% | |
| TATTTACTTCCCTTCTTTCT+AGG | - | chr3_2:87642240-87642259 | None:intergenic | 30.0% | |
| !! | AATATCTGTGAAAGTATTGG+TGG | + | chr3_2:87642256-87642275 | Msa0434670:three_prime_UTR | 30.0% |
| TAGAGTAATGCTTACTAGTA+CGG | + | chr3_2:87642340-87642359 | Msa0434670:three_prime_UTR | 30.0% | |
| AAGAAGGGAGAAAACGAAAT+TGG | - | chr3_2:87637269-87637288 | None:intergenic | 35.0% | |
| TTCTGTTATGTACTCGTCAT+TGG | + | chr3_2:87637351-87637370 | Msa0434670:intron | 35.0% | |
| TCTGTTATGTACTCGTCATT+GGG | + | chr3_2:87637352-87637371 | Msa0434670:intron | 35.0% | |
| ! | AAAAGCACACAACACAAGTT+TGG | - | chr3_2:87637678-87637697 | None:intergenic | 35.0% |
| CTTTCATGTCATTGCAGATA+TGG | + | chr3_2:87637873-87637892 | Msa0434670:intron | 35.0% | |
| !!! | GCAATTTTAGCTTTGTGCAT+TGG | + | chr3_2:87637962-87637981 | Msa0434670:intron | 35.0% |
| ACTTATCCAAACTTGTATGC+AGG | + | chr3_2:87638032-87638051 | Msa0434670:intron | 35.0% | |
| TTCAACATTGTGAAACCCTT+GGG | - | chr3_2:87638067-87638086 | None:intergenic | 35.0% | |
| TTCAAACATTCTGCAGAGAT+TGG | + | chr3_2:87638208-87638227 | Msa0434670:intron | 35.0% | |
| AAGCGTTATGCTAGAATAAG+AGG | - | chr3_2:87638306-87638325 | None:intergenic | 35.0% | |
| ! | TAATCTGAGAGAGCATGTTA+AGG | + | chr3_2:87638405-87638424 | Msa0434670:CDS | 35.0% |
| ATACTTATACCTCAACAAGG+GGG | - | chr3_2:87638470-87638489 | None:intergenic | 35.0% | |
| AAGTTGTGTTTGCATGACTT+GGG | - | chr3_2:87638640-87638659 | None:intergenic | 35.0% | |
| ACAGAAAATCCCCTAAATTC+GGG | - | chr3_2:87638698-87638717 | None:intergenic | 35.0% | |
| CGAATATGAGTCTTTGATTC+TGG | + | chr3_2:87638810-87638829 | Msa0434670:intron | 35.0% | |
| ! | AACGTTTTACCAATTGTCCT+AGG | + | chr3_2:87639093-87639112 | Msa0434670:intron | 35.0% |
| TTCATTCATCCTAGGACAAT+TGG | - | chr3_2:87639105-87639124 | None:intergenic | 35.0% | |
| ! | TTATGTCTCGTGTTACTCTT+CGG | + | chr3_2:87639183-87639202 | Msa0434670:intron | 35.0% |
| TTGAGCTTATAAAGAGTGGT+TGG | + | chr3_2:87639300-87639319 | Msa0434670:intron | 35.0% | |
| TGAGCTTATAAAGAGTGGTT+GGG | + | chr3_2:87639301-87639320 | Msa0434670:intron | 35.0% | |
| !!! | AGATTATTTTTTTCCGGTGG+TGG | + | chr3_2:87639441-87639460 | Msa0434670:intron | 35.0% |
| !!! | GATTATTTTTTTCCGGTGGT+GGG | + | chr3_2:87639442-87639461 | Msa0434670:intron | 35.0% |
| !!! | ATTATTTTTTTCCGGTGGTG+GGG | + | chr3_2:87639443-87639462 | Msa0434670:intron | 35.0% |
| CTTAAAGATGGTAAGGTAGA+CGG | - | chr3_2:87639835-87639854 | None:intergenic | 35.0% | |
| AAGAAGGCTTAAAGATGGTA+AGG | - | chr3_2:87639842-87639861 | None:intergenic | 35.0% | |
| ACTTACTGTGTTTGTTTCCT+GGG | + | chr3_2:87639902-87639921 | Msa0434670:intron | 35.0% | |
| AGGAGTAAAATTAAGGGACT+AGG | - | chr3_2:87639949-87639968 | None:intergenic | 35.0% | |
| !! | TGTTGATTCATTGTAGGATG+AGG | + | chr3_2:87640039-87640058 | Msa0434670:intron | 35.0% |
| ! | TCACCACTTGAGTTAGATTT+TGG | + | chr3_2:87640147-87640166 | Msa0434670:intron | 35.0% |
| GGGAATTCTAATTTAACCCA+AGG | + | chr3_2:87640180-87640199 | Msa0434670:intron | 35.0% | |
| GAGAAAATCTGGAAAATCCT+TGG | - | chr3_2:87640200-87640219 | None:intergenic | 35.0% | |
| ATGAACCGATTGAGAAAATC+TGG | - | chr3_2:87640211-87640230 | None:intergenic | 35.0% | |
| !! | TTTATGGTGTTGCGTATTTC+AGG | + | chr3_2:87640379-87640398 | Msa0434670:intron | 35.0% |
| !! | TTATGGTGTTGCGTATTTCA+GGG | + | chr3_2:87640380-87640399 | Msa0434670:intron | 35.0% |
| ! | CAATTGCCGGAAACATATTT+TGG | - | chr3_2:87640445-87640464 | None:intergenic | 35.0% |
| ACCAGTGAAAAATCAATTGC+CGG | - | chr3_2:87640458-87640477 | None:intergenic | 35.0% | |
| ATTATGGTTGAGGTTTAGGA+TGG | + | chr3_2:87640825-87640844 | Msa0434670:intron | 35.0% | |
| CCTAAATTACCCTAAGGAAA+AGG | - | chr3_2:87640851-87640870 | None:intergenic | 35.0% | |
| ! | CCTTTTCCTTAGGGTAATTT+AGG | + | chr3_2:87640848-87640867 | Msa0434670:intron | 35.0% |
| TTAGGGTAATAAGTGTCCTA+AGG | + | chr3_2:87640866-87640885 | Msa0434670:intron | 35.0% | |
| AATAAGTGTCCTAAGGACAT+TGG | + | chr3_2:87640873-87640892 | Msa0434670:intron | 35.0% | |
| GGATTGTTTAAGGAAACAAG+AGG | - | chr3_2:87641000-87641019 | None:intergenic | 35.0% | |
| TTTCCTTAAACAATCCCCTT+AGG | + | chr3_2:87641004-87641023 | Msa0434670:intron | 35.0% | |
| TTCCTTAAACAATCCCCTTA+GGG | + | chr3_2:87641005-87641024 | Msa0434670:intron | 35.0% | |
| AACGTTAATAAGTGCCCTAA+GGG | - | chr3_2:87641022-87641041 | None:intergenic | 35.0% | |
| !! | TTAAGTGGGATTAGCTACAT+GGG | - | chr3_2:87641158-87641177 | None:intergenic | 35.0% |
| !! | ATTAAGTGGGATTAGCTACA+TGG | - | chr3_2:87641159-87641178 | None:intergenic | 35.0% |
| ATGTAGCTAATCCCACTTAA+TGG | + | chr3_2:87641158-87641177 | Msa0434670:intron | 35.0% | |
| TGTAGCTAATCCCACTTAAT+GGG | + | chr3_2:87641159-87641178 | Msa0434670:intron | 35.0% | |
| TAATCCCACTTAATGGGATA+AGG | + | chr3_2:87641165-87641184 | Msa0434670:intron | 35.0% | |
| CAAACCTTATCCCATTAAGT+GGG | - | chr3_2:87641172-87641191 | None:intergenic | 35.0% | |
| ! | TAAGGTTTGGTCGTTATTGT+TGG | + | chr3_2:87641183-87641202 | Msa0434670:intron | 35.0% |
| TATGGAATAGAAAACCACTG+TGG | - | chr3_2:87641371-87641390 | None:intergenic | 35.0% | |
| ! | TTCCATACTCTAAGTGCTTT+TGG | + | chr3_2:87641384-87641403 | Msa0434670:CDS | 35.0% |
| !! | TTCCAAAAGCACTTAGAGTA+TGG | - | chr3_2:87641389-87641408 | None:intergenic | 35.0% |
| TTGTCAAGCCTTTCTTGTAT+TGG | + | chr3_2:87641717-87641736 | Msa0434670:intron | 35.0% | |
| GCAAAGCTGTGAAAATAGAA+GGG | - | chr3_2:87641765-87641784 | None:intergenic | 35.0% | |
| AGCAAAGCTGTGAAAATAGA+AGG | - | chr3_2:87641766-87641785 | None:intergenic | 35.0% | |
| TTCAGTGGTCATCATTGATA+GGG | + | chr3_2:87641800-87641819 | Msa0434670:CDS | 35.0% | |
| ! | TGAGCTTTTCTCCAGTTATA+TGG | + | chr3_2:87642035-87642054 | Msa0434670:three_prime_UTR | 35.0% |
| TTCTTTCACCCTAGAAAGAA+GGG | + | chr3_2:87642228-87642247 | Msa0434670:three_prime_UTR | 35.0% | |
| GCCAAAAAGGCAATCAAAAT+CGG | + | chr3_2:87642281-87642300 | Msa0434670:three_prime_UTR | 35.0% | |
| !!! | TCCGATTTTGATTGCCTTTT+TGG | - | chr3_2:87642285-87642304 | None:intergenic | 35.0% |
| TGCTTACTAGTACGGAAAAA+TGG | + | chr3_2:87642348-87642367 | Msa0434670:three_prime_UTR | 35.0% | |
| TTGTGATGTGGGGATAAAAC+TGG | - | chr3_2:87637127-87637146 | None:intergenic | 40.0% | |
| GAGAGAAAGAGGATCGTAAT+TGG | - | chr3_2:87637214-87637233 | None:intergenic | 40.0% | |
| AAGGTGAATGAGAGAGAAAG+AGG | - | chr3_2:87637225-87637244 | None:intergenic | 40.0% | |
| CTGTTATGTACTCGTCATTG+GGG | + | chr3_2:87637353-87637372 | Msa0434670:intron | 40.0% | |
| TACTCCCTATCTCACAATGA+GGG | - | chr3_2:87637648-87637667 | None:intergenic | 40.0% | |
| TTACTCCCTATCTCACAATG+AGG | - | chr3_2:87637649-87637668 | None:intergenic | 40.0% | |
| ! | GTGACTTGCAAAGTTCATCA+CGG | - | chr3_2:87637835-87637854 | None:intergenic | 40.0% |
| ! | TTGCAAGTCACGCTTTCTTT+TGG | + | chr3_2:87637844-87637863 | Msa0434670:intron | 40.0% |
| ! | TGCAAGTCACGCTTTCTTTT+GGG | + | chr3_2:87637845-87637864 | Msa0434670:intron | 40.0% |
| GCAGATATGGATACTTCTTC+AGG | + | chr3_2:87637886-87637905 | Msa0434670:intron | 40.0% | |
| ! | AGAGTTTTACAACGGTGCAA+CGG | - | chr3_2:87637928-87637947 | None:intergenic | 40.0% |
| ! | CCAGGTGAAGAGTTTTACAA+CGG | - | chr3_2:87637936-87637955 | None:intergenic | 40.0% |
| ! | AAAACTCTTCACCTGGTTTG+TGG | + | chr3_2:87637940-87637959 | Msa0434670:intron | 40.0% |
| AGCTAAAATTGCCACAAACC+AGG | - | chr3_2:87637954-87637973 | None:intergenic | 40.0% | |
| GTCTAACCTGCATACAAGTT+TGG | - | chr3_2:87638041-87638060 | None:intergenic | 40.0% | |
| CTTCAACATTGTGAAACCCT+TGG | - | chr3_2:87638068-87638087 | None:intergenic | 40.0% | |
| CAAGGGTTTCACAATGTTGA+AGG | + | chr3_2:87638066-87638085 | Msa0434670:CDS | 40.0% | |
| CATACGATAAGTACGCATCA+GGG | - | chr3_2:87638101-87638120 | None:intergenic | 40.0% | |
| TCATACGATAAGTACGCATC+AGG | - | chr3_2:87638102-87638121 | None:intergenic | 40.0% | |
| CTGTGAGAGTCTGCATAATA+AGG | - | chr3_2:87638172-87638191 | None:intergenic | 40.0% | |
| TTATTGTTTCCCCCTTGTTG+AGG | + | chr3_2:87638458-87638477 | Msa0434670:CDS | 40.0% | |
| GAAGTTGTGTTTGCATGACT+TGG | - | chr3_2:87638641-87638660 | None:intergenic | 40.0% | |
| TCTGTTATAAAAGAGAGGGG+AGG | + | chr3_2:87638713-87638732 | Msa0434670:intron | 40.0% | |
| CTGTTATAAAAGAGAGGGGA+GGG | + | chr3_2:87638714-87638733 | Msa0434670:intron | 40.0% | |
| TGTTATAAAAGAGAGGGGAG+GGG | + | chr3_2:87638715-87638734 | Msa0434670:intron | 40.0% | |
| AGGAGAGTTTCTCTCTAGTT+AGG | + | chr3_2:87638776-87638795 | Msa0434670:intron | 40.0% | |
| CAATGGTGGCAAAACAGAAA+AGG | - | chr3_2:87638846-87638865 | None:intergenic | 40.0% | |
| GCTTAAGATCTCTACAATGG+TGG | - | chr3_2:87638860-87638879 | None:intergenic | 40.0% | |
| CGAGCTTAAGATCTCTACAA+TGG | - | chr3_2:87638863-87638882 | None:intergenic | 40.0% | |
| ! | TATGTCTCGTGTTACTCTTC+GGG | + | chr3_2:87639184-87639203 | Msa0434670:intron | 40.0% |
| ATTCTCATTCATCAGAGGAG+GGG | - | chr3_2:87639559-87639578 | None:intergenic | 40.0% | |
| CATTCTCATTCATCAGAGGA+GGG | - | chr3_2:87639560-87639579 | None:intergenic | 40.0% | |
| ACATTCTCATTCATCAGAGG+AGG | - | chr3_2:87639561-87639580 | None:intergenic | 40.0% | |
| TCCTCTGATGAATGAGAATG+TGG | + | chr3_2:87639560-87639579 | Msa0434670:CDS | 40.0% | |
| TCCACATTCTCATTCATCAG+AGG | - | chr3_2:87639564-87639583 | None:intergenic | 40.0% | |
| CAAAGCTCTACTGCTACAAA+TGG | - | chr3_2:87639627-87639646 | None:intergenic | 40.0% | |
| ! | TTGCTTTGCAGTTTGGAATC+TGG | + | chr3_2:87639682-87639701 | Msa0434670:intron | 40.0% |
| ! | TGCTTTGCAGTTTGGAATCT+GGG | + | chr3_2:87639683-87639702 | Msa0434670:intron | 40.0% |
| CACTTACTGTGTTTGTTTCC+TGG | + | chr3_2:87639901-87639920 | Msa0434670:intron | 40.0% | |
| !! | GAAGGCTGTTGATTCATTGT+AGG | + | chr3_2:87640033-87640052 | Msa0434670:intron | 40.0% |
| !! | TATGGTGTTGCGTATTTCAG+GGG | + | chr3_2:87640381-87640400 | Msa0434670:intron | 40.0% |
| CATCCTTGTGATAAGAGAAG+AGG | + | chr3_2:87640407-87640426 | Msa0434670:CDS | 40.0% | |
| ATGCCTCTTCTCTTATCACA+AGG | - | chr3_2:87640413-87640432 | None:intergenic | 40.0% | |
| !! | TCCGGCAATTGATTTTTCAC+TGG | + | chr3_2:87640454-87640473 | Msa0434670:CDS | 40.0% |
| TCACTGGTAAGTGGAAAAAG+TGG | + | chr3_2:87640470-87640489 | Msa0434670:intron | 40.0% | |
| TTCCAAAAATTTCAGTCCCC+TGG | - | chr3_2:87640682-87640701 | None:intergenic | 40.0% | |
| !! | GGGGACTGAAATTTTTGGAA+TGG | + | chr3_2:87640682-87640701 | Msa0434670:CDS | 40.0% |
| !! | TTTAGGATGGCCTTTTCCTT+AGG | + | chr3_2:87640838-87640857 | Msa0434670:intron | 40.0% |
| ! | TTAGGATGGCCTTTTCCTTA+GGG | + | chr3_2:87640839-87640858 | Msa0434670:intron | 40.0% |
| ! | TCCTAAGGACATTGGTTAAG+AGG | + | chr3_2:87640881-87640900 | Msa0434670:intron | 40.0% |
| ACCTCTTAACCAATGTCCTT+AGG | - | chr3_2:87640885-87640904 | None:intergenic | 40.0% | |
| ACGTTAATAAGTGCCCTAAG+GGG | - | chr3_2:87641021-87641040 | None:intergenic | 40.0% | |
| CAACGTTAATAAGTGCCCTA+AGG | - | chr3_2:87641023-87641042 | None:intergenic | 40.0% | |
| CCAAACCTTATCCCATTAAG+TGG | - | chr3_2:87641173-87641192 | None:intergenic | 40.0% | |
| CCACTTAATGGGATAAGGTT+TGG | + | chr3_2:87641170-87641189 | Msa0434670:intron | 40.0% | |
| ! | TCATATCTCTGTATTGGTCC+AGG | + | chr3_2:87641307-87641326 | Msa0434670:intron | 40.0% |
| GTTATGGACACGCAAAGAAA+AGG | + | chr3_2:87641329-87641348 | Msa0434670:CDS | 40.0% | |
| GTTCAGTGGTCATCATTGAT+AGG | + | chr3_2:87641799-87641818 | Msa0434670:CDS | 40.0% | |
| TCAGTGGTCATCATTGATAG+GGG | + | chr3_2:87641801-87641820 | Msa0434670:CDS | 40.0% | |
| ! | TGGAATTTTGCCAGGAAAGT+TGG | - | chr3_2:87641940-87641959 | None:intergenic | 40.0% |
| TTTCCTGGCAAAATTCCACA+GGG | + | chr3_2:87641942-87641961 | Msa0434670:CDS | 40.0% | |
| TTGCTGACGAGAAACTTTCT+GGG | + | chr3_2:87641985-87642004 | Msa0434670:CDS | 40.0% | |
| GAGAAAACGGGAAGAGAATA+AGG | - | chr3_2:87642183-87642202 | None:intergenic | 40.0% | |
| !! | CTTCTTTCTAGGGTGAAAGA+AGG | - | chr3_2:87642229-87642248 | None:intergenic | 40.0% |
| CTTCTTTCACCCTAGAAAGA+AGG | + | chr3_2:87642227-87642246 | Msa0434670:three_prime_UTR | 40.0% | |
| !! | AGTATTGGTGGTAGCCAAAA+AGG | + | chr3_2:87642268-87642287 | Msa0434670:three_prime_UTR | 40.0% |
| !! | TGGTGCTGTTATAGTTGGCA+TGG | - | chr3_2:87637067-87637086 | None:intergenic | 45.0% |
| !! | TGTGGTGGTGCTGTTATAGT+TGG | - | chr3_2:87637072-87637091 | None:intergenic | 45.0% |
| GAAGATACGCGAAGTGAATG+TGG | - | chr3_2:87637180-87637199 | None:intergenic | 45.0% | |
| ! | GCAAAGAAAGAGCGTGGAAA+AGG | - | chr3_2:87637244-87637263 | None:intergenic | 45.0% |
| TTGGAAGCAAAGAAAGAGCG+TGG | - | chr3_2:87637250-87637269 | None:intergenic | 45.0% | |
| TGTGTCCCTCATTGTGAGAT+AGG | + | chr3_2:87637640-87637659 | Msa0434670:intron | 45.0% | |
| GTGTCCCTCATTGTGAGATA+GGG | + | chr3_2:87637641-87637660 | Msa0434670:intron | 45.0% | |
| ! | GAGTTTTACAACGGTGCAAC+GGG | - | chr3_2:87637927-87637946 | None:intergenic | 45.0% |
| CCGTTGTAAAACTCTTCACC+TGG | + | chr3_2:87637933-87637952 | Msa0434670:CDS | 45.0% | |
| CTTCATTCCCGCAATATTCC+AGG | + | chr3_2:87638336-87638355 | Msa0434670:intron | 45.0% | |
| ! | AGAGAGCATGTTAAGGCAAG+CGG | + | chr3_2:87638412-87638431 | Msa0434670:CDS | 45.0% |
| ! | TGTTTGCATGACTTGGGTCT+TGG | - | chr3_2:87638634-87638653 | None:intergenic | 45.0% |
| TTAGTACCCTGCCCGAATTT+AGG | + | chr3_2:87638684-87638703 | Msa0434670:intron | 45.0% | |
| TAGTACCCTGCCCGAATTTA+GGG | + | chr3_2:87638685-87638704 | Msa0434670:intron | 45.0% | |
| AAATCCCCTAAATTCGGGCA+GGG | - | chr3_2:87638693-87638712 | None:intergenic | 45.0% | |
| AAAATCCCCTAAATTCGGGC+AGG | - | chr3_2:87638694-87638713 | None:intergenic | 45.0% | |
| AAGTCGTGCTTGCATGACTT+GGG | + | chr3_2:87638948-87638967 | Msa0434670:intron | 45.0% | |
| ATTTGAATAGACCCCACCAC+CGG | - | chr3_2:87639457-87639476 | None:intergenic | 45.0% | |
| CAAACAGCAGTTGGAGTCTT+TGG | + | chr3_2:87639504-87639523 | Msa0434670:CDS | 45.0% | |
| AGCTCTACTGCTACAAATGG+TGG | - | chr3_2:87639624-87639643 | None:intergenic | 45.0% | |
| ATAATCTTACAGCAGCTCCC+AGG | - | chr3_2:87639922-87639941 | None:intergenic | 45.0% | |
| TGAGGACATGAAGTGTGTGT+TGG | + | chr3_2:87640057-87640076 | Msa0434670:intron | 45.0% | |
| GAGGACATGAAGTGTGTGTT+GGG | + | chr3_2:87640058-87640077 | Msa0434670:intron | 45.0% | |
| !! | ATGGTGTTGCGTATTTCAGG+GGG | + | chr3_2:87640382-87640401 | Msa0434670:intron | 45.0% |
| TGTTTAGATAGAGCGCGATG+AGG | + | chr3_2:87640608-87640627 | Msa0434670:intron | 45.0% | |
| AGAATGAAGAAGTTGCTGCC+AGG | + | chr3_2:87640661-87640680 | Msa0434670:CDS | 45.0% | |
| GAATGAAGAAGTTGCTGCCA+GGG | + | chr3_2:87640662-87640681 | Msa0434670:CDS | 45.0% | |
| AATGAAGAAGTTGCTGCCAG+GGG | + | chr3_2:87640663-87640682 | Msa0434670:CDS | 45.0% | |
| ! | TGCCAGGGGACTGAAATTTT+TGG | + | chr3_2:87640677-87640696 | Msa0434670:CDS | 45.0% |
| TGCCCTAAGGGGATTGTTTA+AGG | - | chr3_2:87641010-87641029 | None:intergenic | 45.0% | |
| ! | CTCTGTATTGGTCCAGGTTA+TGG | + | chr3_2:87641313-87641332 | Msa0434670:intron | 45.0% |
| TTCTTTGCGTGTCCATAACC+TGG | - | chr3_2:87641328-87641347 | None:intergenic | 45.0% | |
| ! | ATTGCTGTTGTTAGCCACAG+TGG | + | chr3_2:87641354-87641373 | Msa0434670:CDS | 45.0% |
| TAATTGTGAGCTGCGTTCAG+TGG | + | chr3_2:87641785-87641804 | Msa0434670:CDS | 45.0% | |
| CAGTGGTCATCATTGATAGG+GGG | + | chr3_2:87641802-87641821 | Msa0434670:CDS | 45.0% | |
| !! | TTTGCCAGGAAAGTTGGTAG+AGG | - | chr3_2:87641934-87641953 | None:intergenic | 45.0% |
| CTTTCCTGGCAAAATTCCAC+AGG | + | chr3_2:87641941-87641960 | Msa0434670:CDS | 45.0% | |
| TTCTCGTCAGCAACATCACT+GGG | - | chr3_2:87641978-87641997 | None:intergenic | 45.0% | |
| TTTCTCGTCAGCAACATCAC+TGG | - | chr3_2:87641979-87641998 | None:intergenic | 45.0% | |
| GTTGCTGACGAGAAACTTTC+TGG | + | chr3_2:87641984-87642003 | Msa0434670:CDS | 45.0% | |
| ! | ACGAGAAACTTTCTGGGAGT+GGG | + | chr3_2:87641991-87642010 | Msa0434670:CDS | 45.0% |
| CAAAATCGGAGCCATGGTAA+AGG | + | chr3_2:87642295-87642314 | Msa0434670:three_prime_UTR | 45.0% | |
| !! | ATATATATATATATATATAC+TGG | + | chr3_2:87637807-87637826 | Msa0434670:intron | 5.0% |
| TGGAGAACGTTGAGATACGC+GGG | - | chr3_2:87637160-87637179 | None:intergenic | 50.0% | |
| GTGGAGAACGTTGAGATACG+CGG | - | chr3_2:87637161-87637180 | None:intergenic | 50.0% | |
| TACAACGGTGCAACGGGTAA+AGG | - | chr3_2:87637921-87637940 | None:intergenic | 50.0% | |
| ATGCAGGTTAGACATGCCCA+AGG | + | chr3_2:87638048-87638067 | Msa0434670:intron | 50.0% | |
| TGCAGGTTAGACATGCCCAA+GGG | + | chr3_2:87638049-87638068 | Msa0434670:intron | 50.0% | |
| AGTACCCTGCCCGAATTTAG+GGG | + | chr3_2:87638686-87638705 | Msa0434670:intron | 50.0% | |
| GAAGTCGTGCTTGCATGACT+TGG | + | chr3_2:87638947-87638966 | Msa0434670:intron | 50.0% | |
| ! | TGCTTGCATGACTTGGGTCT+TGG | + | chr3_2:87638954-87638973 | Msa0434670:intron | 50.0% |
| AGGACCATGCAAACAGCAGT+TGG | + | chr3_2:87639495-87639514 | Msa0434670:intron | 50.0% | |
| ! | GACTCCAACTGCTGTTTGCA+TGG | - | chr3_2:87639502-87639521 | None:intergenic | 50.0% |
| ACAGCAGTTGGAGTCTTTGG+TGG | + | chr3_2:87639507-87639526 | Msa0434670:CDS | 50.0% | |
| !! | AGTTGGAGTCTTTGGTGGTG+AGG | + | chr3_2:87639512-87639531 | Msa0434670:CDS | 50.0% |
| CACCACATACCAAATGCTCG+CGG | - | chr3_2:87639650-87639669 | None:intergenic | 50.0% | |
| ! | AGCGCGATGAGGACATTTTG+TGG | + | chr3_2:87640619-87640638 | Msa0434670:CDS | 50.0% |
| GAGTCCTCTACCAACTTTCC+TGG | + | chr3_2:87641927-87641946 | Msa0434670:CDS | 50.0% | |
| CAACATCACTGGGAAGGTCA+AGG | - | chr3_2:87641968-87641987 | None:intergenic | 50.0% | |
| ! | GACGAGAAACTTTCTGGGAG+TGG | + | chr3_2:87641990-87642009 | Msa0434670:CDS | 50.0% |
| GGCAATCAAAATCGGAGCCA+TGG | + | chr3_2:87642289-87642308 | Msa0434670:three_prime_UTR | 50.0% | |
| GATGGCGAGGTTGTGATGTG+GGG | - | chr3_2:87637137-87637156 | None:intergenic | 55.0% | |
| GGATGGCGAGGTTGTGATGT+GGG | - | chr3_2:87637138-87637157 | None:intergenic | 55.0% | |
| AACGTTGAGATACGCGGGGA+TGG | - | chr3_2:87637155-87637174 | None:intergenic | 55.0% | |
| GGAGAACGTTGAGATACGCG+GGG | - | chr3_2:87637159-87637178 | None:intergenic | 55.0% | |
| CTTCGCGTATCTTCTCGCTC+AGG | + | chr3_2:87637186-87637205 | Msa0434670:CDS | 55.0% | |
| GATGCAAGTCTCACCCCTCT+CGG | + | chr3_2:87638129-87638148 | Msa0434670:CDS | 55.0% | |
| TTACCTGCTTCCAGCCGAGA+GGG | - | chr3_2:87638146-87638165 | None:intergenic | 55.0% | |
| ATTACCTGCTTCCAGCCGAG+AGG | - | chr3_2:87638147-87638166 | None:intergenic | 55.0% | |
| AGAGCTTTGCCGCGAGCATT+TGG | + | chr3_2:87639638-87639657 | Msa0434670:CDS | 55.0% | |
| TGCCGCGAGCATTTGGTATG+TGG | + | chr3_2:87639645-87639664 | Msa0434670:intron | 55.0% | |
| ! | AGGCCCTGTGGAATTTTGCC+AGG | - | chr3_2:87641948-87641967 | None:intergenic | 55.0% |
| CGTCAGCAACATCACTGGGA+AGG | - | chr3_2:87641974-87641993 | None:intergenic | 55.0% | |
| !! | AGGGTGAAAGAAGGTGCCAG+AGG | - | chr3_2:87642220-87642239 | None:intergenic | 55.0% |
| GGGATGGCGAGGTTGTGATG+TGG | - | chr3_2:87637139-87637158 | None:intergenic | 60.0% | |
| TACCTGCTTCCAGCCGAGAG+GGG | - | chr3_2:87638145-87638164 | None:intergenic | 60.0% | |
| GGTGGTGAGGCACACACTGA+TGG | + | chr3_2:87639525-87639544 | Msa0434670:CDS | 60.0% | |
| TGAGATACGCGGGGATGGCG+AGG | - | chr3_2:87637150-87637169 | None:intergenic | 65.0% | |
| CAAGTCTCACCCCTCTCGGC+TGG | + | chr3_2:87638133-87638152 | Msa0434670:CDS | 65.0% | |
| CTGGGAAGGTCAAGGCCCTG+TGG | - | chr3_2:87641960-87641979 | None:intergenic | 65.0% | |
| CACCCCTCTCGGCTGGAAGC+AGG | + | chr3_2:87638140-87638159 | Msa0434670:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 87636983 | 87642376 | 87636983 | ID=Msa0434670;Name=Msa0434670 |
| chr3_2 | mRNA | 87636983 | 87642376 | 87636983 | ID=Msa0434670-mRNA-1;Parent=Msa0434670;Name=Msa0434670-mRNA-1;_AED=0.10;_eAED=0.10;_QI=83|1|1|1|1|1|10|351|333 |
| chr3_2 | exon | 87636983 | 87637207 | 87636983 | ID=Msa0434670-mRNA-1:exon:25564;Parent=Msa0434670-mRNA-1 |
| chr3_2 | exon | 87637890 | 87637954 | 87637890 | ID=Msa0434670-mRNA-1:exon:25565;Parent=Msa0434670-mRNA-1 |
| chr3_2 | exon | 87638054 | 87638161 | 87638054 | ID=Msa0434670-mRNA-1:exon:25566;Parent=Msa0434670-mRNA-1 |
| chr3_2 | exon | 87638400 | 87638479 | 87638400 | ID=Msa0434670-mRNA-1:exon:25567;Parent=Msa0434670-mRNA-1 |
| chr3_2 | exon | 87639497 | 87639659 | 87639497 | ID=Msa0434670-mRNA-1:exon:25568;Parent=Msa0434670-mRNA-1 |
| chr3_2 | exon | 87640401 | 87640475 | 87640401 | ID=Msa0434670-mRNA-1:exon:25569;Parent=Msa0434670-mRNA-1 |
| chr3_2 | exon | 87640615 | 87640703 | 87640615 | ID=Msa0434670-mRNA-1:exon:25570;Parent=Msa0434670-mRNA-1 |
| chr3_2 | exon | 87641329 | 87641448 | 87641329 | ID=Msa0434670-mRNA-1:exon:25571;Parent=Msa0434670-mRNA-1 |
| chr3_2 | exon | 87641779 | 87641823 | 87641779 | ID=Msa0434670-mRNA-1:exon:25572;Parent=Msa0434670-mRNA-1 |
| chr3_2 | exon | 87641911 | 87642376 | 87641911 | ID=Msa0434670-mRNA-1:exon:25573;Parent=Msa0434670-mRNA-1 |
| chr3_2 | five_prime_UTR | 87636983 | 87637065 | 87636983 | ID=Msa0434670-mRNA-1:five_prime_utr;Parent=Msa0434670-mRNA-1 |
| chr3_2 | CDS | 87637066 | 87637207 | 87637066 | ID=Msa0434670-mRNA-1:cds;Parent=Msa0434670-mRNA-1 |
| chr3_2 | CDS | 87637890 | 87637954 | 87637890 | ID=Msa0434670-mRNA-1:cds;Parent=Msa0434670-mRNA-1 |
| chr3_2 | CDS | 87638054 | 87638161 | 87638054 | ID=Msa0434670-mRNA-1:cds;Parent=Msa0434670-mRNA-1 |
| chr3_2 | CDS | 87638400 | 87638479 | 87638400 | ID=Msa0434670-mRNA-1:cds;Parent=Msa0434670-mRNA-1 |
| chr3_2 | CDS | 87639497 | 87639659 | 87639497 | ID=Msa0434670-mRNA-1:cds;Parent=Msa0434670-mRNA-1 |
| chr3_2 | CDS | 87640401 | 87640475 | 87640401 | ID=Msa0434670-mRNA-1:cds;Parent=Msa0434670-mRNA-1 |
| chr3_2 | CDS | 87640615 | 87640703 | 87640615 | ID=Msa0434670-mRNA-1:cds;Parent=Msa0434670-mRNA-1 |
| chr3_2 | CDS | 87641329 | 87641448 | 87641329 | ID=Msa0434670-mRNA-1:cds;Parent=Msa0434670-mRNA-1 |
| chr3_2 | CDS | 87641779 | 87641823 | 87641779 | ID=Msa0434670-mRNA-1:cds;Parent=Msa0434670-mRNA-1 |
| chr3_2 | CDS | 87641911 | 87642025 | 87641911 | ID=Msa0434670-mRNA-1:cds;Parent=Msa0434670-mRNA-1 |
| chr3_2 | three_prime_UTR | 87642026 | 87642376 | 87642026 | ID=Msa0434670-mRNA-1:three_prime_utr;Parent=Msa0434670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
