Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435120 | KEH36203.1 | 89.764 | 254 | 26 | 0 | 1 | 254 | 1 | 254 | 1.09e-166 | 476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435120 | sp|Q9FXG8|BLH10_ARATH | 34.498 | 229 | 117 | 10 | 34 | 254 | 46 | 249 | 8.24e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435120 | A0A072V4B9 | 89.764 | 254 | 26 | 0 | 1 | 254 | 1 | 254 | 5.21e-167 | 476 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0193650 | Msa0435120 | 0.801067 | 1.072291e-48 | -8.615850e-47 |
| Msa0435120 | Msa0479220 | 0.906608 | 1.236566e-80 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435120 | MtrunA17_Chr3g0141941 | 90.157 | 254 | 25 | 0 | 1 | 254 | 1 | 254 | 4.24e-169 | 477 |
| Msa0435120 | MtrunA17_Chr1g0155681 | 57.609 | 276 | 84 | 10 | 1 | 254 | 1 | 265 | 6.03e-82 | 258 |
| Msa0435120 | MtrunA17_Chr4g0025521 | 40.206 | 97 | 53 | 2 | 162 | 258 | 217 | 308 | 4.20e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435120 | AT1G19700.1 | 34.498 | 229 | 117 | 10 | 34 | 254 | 46 | 249 | 8.37e-13 | 68.2 |
| Msa0435120 | AT1G19700.3 | 34.498 | 229 | 117 | 10 | 34 | 254 | 46 | 249 | 8.37e-13 | 68.2 |
| Msa0435120 | AT1G19700.5 | 34.498 | 229 | 117 | 10 | 34 | 254 | 46 | 249 | 8.37e-13 | 68.2 |
| Msa0435120 | AT1G19700.4 | 34.498 | 229 | 117 | 10 | 34 | 254 | 46 | 249 | 8.37e-13 | 68.2 |
| Msa0435120 | AT1G19700.2 | 34.498 | 229 | 117 | 10 | 34 | 254 | 46 | 249 | 8.37e-13 | 68.2 |
| Msa0435120 | AT1G75410.3 | 32.127 | 221 | 126 | 6 | 35 | 254 | 50 | 247 | 1.25e-11 | 64.7 |
| Msa0435120 | AT1G75410.1 | 32.127 | 221 | 126 | 6 | 35 | 254 | 50 | 247 | 1.30e-11 | 64.7 |
| Msa0435120 | AT1G75410.2 | 32.127 | 221 | 126 | 6 | 35 | 254 | 50 | 247 | 1.30e-11 | 64.7 |
| Msa0435120 | AT4G34610.2 | 46.667 | 90 | 34 | 3 | 165 | 254 | 143 | 218 | 5.28e-11 | 62.8 |
| Msa0435120 | AT4G34610.4 | 46.667 | 90 | 34 | 3 | 165 | 254 | 143 | 218 | 5.28e-11 | 62.8 |
| Msa0435120 | AT4G34610.3 | 46.667 | 90 | 34 | 3 | 165 | 254 | 143 | 218 | 5.28e-11 | 62.8 |
| Msa0435120 | AT4G34610.1 | 46.667 | 90 | 34 | 3 | 165 | 254 | 143 | 218 | 5.28e-11 | 62.8 |
Find 153 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCTTTGGACATGGTTGC+TGG | 0.171008 | 3_2:-88139008 | Msa0435120:three_prime_UTR |
| AGGAGTTAATATTATTTAAT+TGG | 0.235821 | 3_2:-88141233 | Msa0435120:five_prime_UTR |
| GACTATCATTTCACAGATTC+AGG | 0.242730 | 3_2:-88137820 | Msa0435120:three_prime_UTR |
| CCTTTCTTTGTACTGGTTGT+AGG | 0.292678 | 3_2:-88139078 | Msa0435120:three_prime_UTR |
| TTAATGCACGTGTTCGTCTT+TGG | 0.306258 | 3_2:-88138332 | Msa0435120:three_prime_UTR |
| GCAAATTGTGGTGTCATCTT+TGG | 0.309506 | 3_2:-88139021 | Msa0435120:three_prime_UTR |
| ATACAAATTAAATCCATAAA+AGG | 0.321563 | 3_2:+88139299 | None:intergenic |
| CATCTTTGGACATGGTTGCT+GGG | 0.322770 | 3_2:-88139007 | Msa0435120:three_prime_UTR |
| CTCACCTTCCTTCTTCAAAC+TGG | 0.322837 | 3_2:-88141109 | Msa0435120:five_prime_UTR |
| CCTTAAGATATTGAGAGTTT+AGG | 0.323728 | 3_2:+88139599 | None:intergenic |
| CCTAAACTCTCAATATCTTA+AGG | 0.324664 | 3_2:-88139599 | Msa0435120:CDS |
| GGATGCAATGCTAAATAATA+TGG | 0.327623 | 3_2:+88139324 | None:intergenic |
| ATCCAACAAATTCTGTCTTT+CGG | 0.327791 | 3_2:+88139384 | None:intergenic |
| TTTCCATTCCATGTTGCTTT+CGG | 0.331914 | 3_2:+88139542 | None:intergenic |
| CTGTAATCCTTTCTTTGTAC+TGG | 0.334725 | 3_2:-88139085 | Msa0435120:three_prime_UTR |
| CCCAACCAAGCATTCTCTTC+GGG | 0.334824 | 3_2:-88140081 | Msa0435120:CDS |
| ATTCTCTTCGGGGTCCTATA+TGG | 0.356421 | 3_2:-88140070 | Msa0435120:CDS |
| GAAATATACAAAGAAGAGTT+TGG | 0.368762 | 3_2:-88138294 | Msa0435120:three_prime_UTR |
| CGCAATGCAAGTGTAGTATA+TGG | 0.380736 | 3_2:+88138969 | None:intergenic |
| ACATATACTCTCTCTGTTGT+TGG | 0.390656 | 3_2:-88141152 | Msa0435120:five_prime_UTR |
| CAGAGCAAGCAGAGTTTCAA+TGG | 0.390687 | 3_2:+88141074 | None:intergenic |
| AAGTGATTCAAAGGAACCTT+GGG | 0.404482 | 3_2:-88138893 | Msa0435120:three_prime_UTR |
| CAGTCTATGCAAATAACTTC+GGG | 0.408568 | 3_2:-88139454 | Msa0435120:CDS |
| GTTGCGAAAACACTCCCTTT+TGG | 0.409394 | 3_2:+88139675 | None:intergenic |
| TATGGTATCAGGTGGCAAAT+TGG | 0.411576 | 3_2:-88138359 | Msa0435120:intron |
| TTGAGAGTTTAGGAAAATGT+TGG | 0.412411 | 3_2:+88139609 | None:intergenic |
| GGGAACAAGAACCTCACTTC+TGG | 0.413629 | 3_2:+88140141 | None:intergenic |
| CGAAACCGGTGTCATTATAC+TGG | 0.413951 | 3_2:+88139812 | None:intergenic |
| GGAAAGCAACAACACATGTT+TGG | 0.421673 | 3_2:-88137799 | Msa0435120:three_prime_UTR |
| TCATTATACTGGTATTGAAA+TGG | 0.422426 | 3_2:+88139823 | None:intergenic |
| GTTAATATTATTTAATTGGT+TGG | 0.422496 | 3_2:-88141229 | Msa0435120:five_prime_UTR |
| ATAATAATATTACAGATGAT+TGG | 0.428620 | 3_2:-88137535 | Msa0435120:three_prime_UTR |
| AACTGGTTTGACAAGGAATC+AGG | 0.432153 | 3_2:-88138497 | Msa0435120:intron |
| GCTGTCATAATAACCAACTA+TGG | 0.435056 | 3_2:+88139131 | None:intergenic |
| CATTGAAACTCTGCTTGCTC+TGG | 0.436708 | 3_2:-88141073 | Msa0435120:intron |
| GTGATAAACTTAATAATGAT+TGG | 0.437942 | 3_2:-88141340 | Msa0435120:five_prime_UTR |
| CTGTTTCAATACTTCGTGCT+TGG | 0.440367 | 3_2:-88138749 | Msa0435120:three_prime_UTR |
| TCCCAACCAAGCATTCTCTT+CGG | 0.445649 | 3_2:-88140082 | Msa0435120:CDS |
| TCCTTTGAATCACTTGAACT+TGG | 0.447044 | 3_2:+88138901 | None:intergenic |
| ATTCATCAGCGATACGAAAC+CGG | 0.447145 | 3_2:+88139798 | None:intergenic |
| ATAATGCTAGCTAGGCAAAC+TGG | 0.452403 | 3_2:-88138514 | Msa0435120:three_prime_UTR |
| AAGAAGGAAGGTGAGACAAA+TGG | 0.455553 | 3_2:+88141117 | None:intergenic |
| TTGTATATTTCCTCAACCAT+TGG | 0.456824 | 3_2:+88138306 | None:intergenic |
| AGACATGCTTTCCATGCATT+CGG | 0.460937 | 3_2:+88139720 | None:intergenic |
| TTAGATATAGTAGTTCCCTT+TGG | 0.461116 | 3_2:+88139763 | None:intergenic |
| GTACCGTTCTTCCAATGATA+AGG | 0.462927 | 3_2:-88141207 | Msa0435120:five_prime_UTR |
| CAAAAGGCACTTCAGCATCT+TGG | 0.463824 | 3_2:-88138819 | Msa0435120:three_prime_UTR |
| GGAGGGACAGATGCATTAGA+AGG | 0.464657 | 3_2:+88139844 | None:intergenic |
| CAAATTCTGTCTTTCGGCTG+AGG | 0.466044 | 3_2:+88139390 | None:intergenic |
| TGCATGGAAAGCATGTCTTC+CGG | 0.466072 | 3_2:-88139715 | Msa0435120:CDS |
| ATCTTTGGACATGGTTGCTG+GGG | 0.467421 | 3_2:-88139006 | Msa0435120:three_prime_UTR |
| CAGAGAAAATAATGCTAGCT+AGG | 0.467771 | 3_2:-88138522 | Msa0435120:three_prime_UTR |
| AAACAACAGCATATGGTTTG+AGG | 0.471400 | 3_2:+88137680 | None:intergenic |
| ACCAAGTTTAACACACCTAT+AGG | 0.472281 | 3_2:-88139979 | Msa0435120:CDS |
| CCCCGAAGAGAATGCTTGGT+TGG | 0.475828 | 3_2:+88140080 | None:intergenic |
| AGACAAGATCAGCACTTGTT+GGG | 0.477704 | 3_2:+88140121 | None:intergenic |
| AGCCGAAAGACAGAATTTGT+TGG | 0.478829 | 3_2:-88139386 | Msa0435120:CDS |
| CGAGGTGAACATATCCATAT+AGG | 0.479681 | 3_2:+88140056 | None:intergenic |
| ATAGTCACTGTGTCGCCTAT+AGG | 0.482382 | 3_2:+88139964 | None:intergenic |
| CAAGTGATTCAAAGGAACCT+TGG | 0.483068 | 3_2:-88138894 | Msa0435120:three_prime_UTR |
| CTCCTCAGATCACTGCCTGC+AGG | 0.488491 | 3_2:-88139647 | Msa0435120:CDS |
| TTATTATGACAGCGATGGTT+TGG | 0.488704 | 3_2:-88139121 | Msa0435120:three_prime_UTR |
| GCCTATAGGTGTGTTAAACT+TGG | 0.490982 | 3_2:+88139978 | None:intergenic |
| TATGTACTAGTAGTAGTAGT+TGG | 0.494906 | 3_2:-88141270 | Msa0435120:five_prime_UTR |
| GGTAATGTCATGAAATCCTC+CGG | 0.496563 | 3_2:+88139696 | None:intergenic |
| GGATATCTCACAAGAAGGAT+TGG | 0.496624 | 3_2:+88139411 | None:intergenic |
| CCCGAAGAGAATGCTTGGTT+GGG | 0.497529 | 3_2:+88140081 | None:intergenic |
| AAGACCGACCACCTTATCAT+TGG | 0.498200 | 3_2:+88141196 | None:intergenic |
| TCAGTCTATGCAAATAACTT+CGG | 0.500629 | 3_2:-88139455 | Msa0435120:CDS |
| TTATGTATCCAGTTTGAAGA+AGG | 0.500999 | 3_2:+88141101 | None:intergenic |
| TCACAATGTCTCTCTTGCAT+TGG | 0.504072 | 3_2:-88137956 | Msa0435120:three_prime_UTR |
| AGTTGGTGTTAAGCAAGTAA+AGG | 0.504482 | 3_2:-88141253 | Msa0435120:five_prime_UTR |
| AAGACAAGATCAGCACTTGT+TGG | 0.508388 | 3_2:+88140120 | None:intergenic |
| GGATTGGAATTAGAATCATT+AGG | 0.508994 | 3_2:+88139427 | None:intergenic |
| AGCATTGGAATGCTCATCAA+TGG | 0.509427 | 3_2:+88139936 | None:intergenic |
| CCAACAGCTTAGGCAACAAA+AGG | 0.510811 | 3_2:-88138835 | Msa0435120:three_prime_UTR |
| CGAGACTAAGAGATAACTCT+TGG | 0.512889 | 3_2:+88139878 | None:intergenic |
| ACACCACAATTTGCATTCGA+TGG | 0.516116 | 3_2:+88139030 | None:intergenic |
| TACATGAGAGCTGTAAGCAT+TGG | 0.517302 | 3_2:+88139921 | None:intergenic |
| GATTTCATGACATTACCAAA+AGG | 0.521517 | 3_2:-88139690 | Msa0435120:CDS |
| CCTACAACCAGTACAAAGAA+AGG | 0.522272 | 3_2:+88139078 | None:intergenic |
| TCATCTGAAAATACACTCCA+AGG | 0.523657 | 3_2:-88138246 | Msa0435120:intron |
| TGTCCGAAAGCAACATGGAA+TGG | 0.523675 | 3_2:-88139545 | Msa0435120:CDS |
| CAAGAGTTATCTCTTAGTCT+CGG | 0.528666 | 3_2:-88139877 | Msa0435120:CDS |
| AATTCTTGTCGTCTTCCAAA+GGG | 0.529186 | 3_2:-88139778 | Msa0435120:CDS |
| TCTTTGTACTGGTTGTAGGT+AGG | 0.529891 | 3_2:-88139074 | Msa0435120:three_prime_UTR |
| GAATTCTTGTCGTCTTCCAA+AGG | 0.533875 | 3_2:-88139779 | Msa0435120:CDS |
| TAAGCTGTTGGTCCACGTAC+CGG | 0.539458 | 3_2:+88138847 | None:intergenic |
| AAGAGTTATCTCTTAGTCTC+GGG | 0.540585 | 3_2:-88139876 | Msa0435120:CDS |
| GTATTCCTTCTTGTTCCCCA+AGG | 0.544341 | 3_2:+88138877 | None:intergenic |
| ATTTCATGACATTACCAAAA+GGG | 0.544569 | 3_2:-88139689 | Msa0435120:CDS |
| TCTTTGGACATGGTTGCTGG+GGG | 0.546073 | 3_2:-88139005 | Msa0435120:three_prime_UTR |
| ACAGGAGTTACTTGATGAGA+TGG | 0.546778 | 3_2:-88139572 | Msa0435120:CDS |
| ACCAAGTTCAAGTGATTCAA+AGG | 0.549397 | 3_2:-88138902 | Msa0435120:three_prime_UTR |
| TCTTTGGAAACCAATGGTTG+AGG | 0.554639 | 3_2:-88138316 | Msa0435120:three_prime_UTR |
| GGTACGTGGACCAACAGCTT+AGG | 0.555219 | 3_2:-88138845 | Msa0435120:three_prime_UTR |
| TGTTCGTCTTTGGAAACCAA+TGG | 0.558642 | 3_2:-88138322 | Msa0435120:three_prime_UTR |
| TTGGTGTTATGCGGCAAGCA+TGG | 0.558919 | 3_2:-88138800 | Msa0435120:three_prime_UTR |
| AGGACCCCGAAGAGAATGCT+TGG | 0.559721 | 3_2:+88140076 | None:intergenic |
| CACTGCCTGCAGGATTCACA+AGG | 0.565086 | 3_2:-88139637 | Msa0435120:CDS |
| ATTGAAAAGTGCCGAATGCA+TGG | 0.565403 | 3_2:-88139731 | Msa0435120:CDS |
| TAATAATAATAATCAGACAT+TGG | 0.566437 | 3_2:-88137872 | Msa0435120:three_prime_UTR |
| TTCAGCATCTTGGTGTTATG+CGG | 0.567244 | 3_2:-88138809 | Msa0435120:three_prime_UTR |
| GATAATCCCAAAGATAGTGA+TGG | 0.570048 | 3_2:-88139490 | Msa0435120:CDS |
| GTATCCAGTTTGAAGAAGGA+AGG | 0.572140 | 3_2:+88141105 | None:intergenic |
| TTATACTGGTATTGAAATGG+AGG | 0.572976 | 3_2:+88139826 | None:intergenic |
| TTATTAAGTTTATCACGTGT+AGG | 0.573657 | 3_2:+88141347 | None:intergenic |
| AAGAAGGAATACCTCGTCTC+CGG | 0.574564 | 3_2:-88138866 | Msa0435120:three_prime_UTR |
| AGGAACCTTGGGGAACAAGA+AGG | 0.579072 | 3_2:-88138882 | Msa0435120:three_prime_UTR |
| AATACCTCGTCTCCGGTACG+TGG | 0.579283 | 3_2:-88138859 | Msa0435120:three_prime_UTR |
| TTAAGTTTATCACGTGTAGG+AGG | 0.579983 | 3_2:+88141350 | None:intergenic |
| TTGAGAAACTGTGAAAGCGA+TGG | 0.592333 | 3_2:-88137931 | Msa0435120:three_prime_UTR |
| GGTAACTTTACAACTGTGGA+TGG | 0.593227 | 3_2:-88137988 | Msa0435120:three_prime_UTR |
| AACGTACAAAATATACAGAT+AGG | 0.594200 | 3_2:-88137598 | Msa0435120:three_prime_UTR |
| GTCTATGCAAATAACTTCGG+GGG | 0.594987 | 3_2:-88139452 | Msa0435120:CDS |
| ATGAATGGCATCATCAGATG+TGG | 0.596558 | 3_2:+88137903 | None:intergenic |
| CCACCTTATCATTGGAAGAA+CGG | 0.601521 | 3_2:+88141204 | None:intergenic |
| GTTAATGTCCGAAAGCAACA+TGG | 0.602339 | 3_2:-88139550 | Msa0435120:CDS |
| CAATACCAGTATAATGACAC+CGG | 0.603044 | 3_2:-88139817 | Msa0435120:CDS |
| TCAATATCTTAAGGCTACAC+AGG | 0.606571 | 3_2:-88139590 | Msa0435120:CDS |
| GATTATCCAATCCAATGTTG+CGG | 0.607575 | 3_2:+88139506 | None:intergenic |
| GGCAGTGATCTGAGGAGTGA+GGG | 0.610386 | 3_2:+88139653 | None:intergenic |
| GTTGGTTATTATGACAGCGA+TGG | 0.610680 | 3_2:-88139126 | Msa0435120:three_prime_UTR |
| TTTACAACTGTGGATGGTGG+TGG | 0.611372 | 3_2:-88137982 | Msa0435120:three_prime_UTR |
| TCTTCCAATGATAAGGTGGT+CGG | 0.614462 | 3_2:-88141200 | Msa0435120:five_prime_UTR |
| GGTTGATACCAGTTACCCCA+AGG | 0.615136 | 3_2:-88138548 | Msa0435120:intron |
| AACTTTACAACTGTGGATGG+TGG | 0.616544 | 3_2:-88137985 | Msa0435120:three_prime_UTR |
| CTAGGCAAACTGGTTTGACA+AGG | 0.616619 | 3_2:-88138504 | Msa0435120:three_prime_UTR |
| GCTGAGGATATCTCACAAGA+AGG | 0.617588 | 3_2:+88139406 | None:intergenic |
| GATTCGTTGTAGTAATTGTG+AGG | 0.618741 | 3_2:+88140021 | None:intergenic |
| AGGCAGTGATCTGAGGAGTG+AGG | 0.618773 | 3_2:+88139652 | None:intergenic |
| TGGTCCACGTACCGGAGACG+AGG | 0.620141 | 3_2:+88138855 | None:intergenic |
| ATCCTGCAGGCAGTGATCTG+AGG | 0.622811 | 3_2:+88139645 | None:intergenic |
| AAATTAAATCCATAAAAGGA+AGG | 0.623816 | 3_2:+88139303 | None:intergenic |
| TAGTAATTGTGAGGTAACAA+AGG | 0.627033 | 3_2:+88140030 | None:intergenic |
| TGTGGTGTCATCTTTGGACA+TGG | 0.628842 | 3_2:-88139015 | Msa0435120:three_prime_UTR |
| CCGTTCTTCCAATGATAAGG+TGG | 0.629055 | 3_2:-88141204 | Msa0435120:five_prime_UTR |
| GTTGGGTAACTTTACAACTG+TGG | 0.629995 | 3_2:-88137992 | Msa0435120:three_prime_UTR |
| TATGGTTACCTCATCCAACA+TGG | 0.631595 | 3_2:+88139342 | None:intergenic |
| GTAGGAGGAAAGCGTGTGTG+TGG | 0.631947 | 3_2:+88141365 | None:intergenic |
| CCAACCAAGCATTCTCTTCG+GGG | 0.638300 | 3_2:-88140080 | Msa0435120:CDS |
| TTGTGAAGAGACCAGAAGTG+AGG | 0.658155 | 3_2:-88140152 | Msa0435120:five_prime_UTR |
| ATGCAAGAGAGACATTGTGA+TGG | 0.664466 | 3_2:+88137959 | None:intergenic |
| TATACTGGTATTGAAATGGA+GGG | 0.666797 | 3_2:+88139827 | None:intergenic |
| AAAGGTATCTTATCTCTGAG+AGG | 0.672450 | 3_2:-88137710 | Msa0435120:three_prime_UTR |
| TAGGAGGAAAGCGTGTGTGT+GGG | 0.675335 | 3_2:+88141366 | None:intergenic |
| GTGAGGTAACAAAGGACTCG+AGG | 0.675570 | 3_2:+88140038 | None:intergenic |
| CTGCCATCGAATGCAAATTG+TGG | 0.686632 | 3_2:-88139033 | Msa0435120:three_prime_UTR |
| ATGGAAAGCATGTCTTCCGG+AGG | 0.687343 | 3_2:-88139712 | Msa0435120:CDS |
| TCTATGCAAATAACTTCGGG+GGG | 0.707179 | 3_2:-88139451 | Msa0435120:CDS |
| AGTCTATGCAAATAACTTCG+GGG | 0.713697 | 3_2:-88139453 | Msa0435120:CDS |
| AGTGATTCAAAGGAACCTTG+GGG | 0.732244 | 3_2:-88138892 | Msa0435120:three_prime_UTR |
| CAAGCATGGAGACCTCAGAG+AGG | 0.733220 | 3_2:-88138786 | Msa0435120:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATTTATTGGTAAAA+AGG | + | chr3_2:88137528-88137547 | None:intergenic | 10.0% |
| !!! | TAGTACATATTTTTATTTAT+TGG | + | chr3_2:88137536-88137555 | None:intergenic | 10.0% |
| !! | TAAAAAATGAAAAATATCTT+TGG | + | chr3_2:88141085-88141104 | None:intergenic | 10.0% |
| !!! | TATTTTTCATTTTTTACTAA+AGG | - | chr3_2:88141089-88141108 | Msa0435120:five_prime_UTR | 10.0% |
| !! | AGGAGTTAATATTATTTAAT+TGG | - | chr3_2:88137584-88137603 | Msa0435120:three_prime_UTR | 15.0% |
| !! | GTTAATATTATTTAATTGGT+TGG | - | chr3_2:88137588-88137607 | Msa0435120:three_prime_UTR | 15.0% |
| !!! | TCATTACAATCTTTTTTAAA+AGG | + | chr3_2:88137860-88137879 | None:intergenic | 15.0% |
| !! | GCATAATTTATTTATATCAT+GGG | + | chr3_2:88138341-88138360 | None:intergenic | 15.0% |
| !! | AGCATAATTTATTTATATCA+TGG | + | chr3_2:88138342-88138361 | None:intergenic | 15.0% |
| !! | AATTTCAACTATAAAAAACA+AGG | + | chr3_2:88138368-88138387 | None:intergenic | 15.0% |
| !!! | ATTAGTTTATAGATTATATC+AGG | + | chr3_2:88138445-88138464 | None:intergenic | 15.0% |
| !! | TTATTATGGAATACAAAATA+CGG | + | chr3_2:88138528-88138547 | None:intergenic | 15.0% |
| !! | ATACAAATTAAATCCATAAA+AGG | + | chr3_2:88139521-88139540 | None:intergenic | 15.0% |
| !!! | TTATCATATCTAACTTTTAT+TGG | - | chr3_2:88139604-88139623 | Msa0435120:CDS | 15.0% |
| !!! | ATCTTTTAATTTATATGGTA+TGG | - | chr3_2:88140440-88140459 | Msa0435120:intron | 15.0% |
| !! | AGAGATTAATAGTAATAAAT+TGG | - | chr3_2:88140612-88140631 | Msa0435120:intron | 15.0% |
| !!! | ATTATTATGTCTTTTATGAA+TGG | + | chr3_2:88140932-88140951 | None:intergenic | 15.0% |
| !! | TAATAATAATAATCAGACAT+TGG | - | chr3_2:88140945-88140964 | Msa0435120:intron | 15.0% |
| !! | ATAATAATATTACAGATGAT+TGG | - | chr3_2:88141282-88141301 | Msa0435120:five_prime_UTR | 15.0% |
| !! | GTGATAAACTTAATAATGAT+TGG | - | chr3_2:88137477-88137496 | Msa0435120:three_prime_UTR | 20.0% |
| !! | GGTAAAAAGGAATAAATAAT+TGG | + | chr3_2:88137515-88137534 | None:intergenic | 20.0% |
| !!! | ATGTAAAAAATTTGCTAAAC+AGG | + | chr3_2:88138154-88138173 | None:intergenic | 20.0% |
| !! | AATATAAATCACATTTAGAG+AGG | - | chr3_2:88138188-88138207 | Msa0435120:intron | 20.0% |
| !! | ATATAAATCACATTTAGAGA+GGG | - | chr3_2:88138189-88138208 | Msa0435120:intron | 20.0% |
| !!! | TTTTATAGTTGAAATTACAC+TGG | - | chr3_2:88138372-88138391 | Msa0435120:intron | 20.0% |
| !!! | TAATGCTTTCTTTATGTTTT+TGG | - | chr3_2:88138461-88138480 | Msa0435120:intron | 20.0% |
| !! | AAAGCACATTATGATTATTA+TGG | + | chr3_2:88138542-88138561 | None:intergenic | 20.0% |
| !! | AAATTAAATCCATAAAAGGA+AGG | + | chr3_2:88139517-88139536 | None:intergenic | 20.0% |
| !! | GTATTATAAAGTAACACATA+CGG | + | chr3_2:88140115-88140134 | None:intergenic | 20.0% |
| !! | GAAAATATAAAATTGAGTGA+AGG | + | chr3_2:88140153-88140172 | None:intergenic | 20.0% |
| !!! | ATATTTTCAATTAGTTGCAA+TGG | - | chr3_2:88140165-88140184 | Msa0435120:five_prime_UTR | 20.0% |
| !! | TTCAACTTTCATTTCATAAT+TGG | - | chr3_2:88140248-88140267 | Msa0435120:intron | 20.0% |
| !!! | GTGTCATCTTTTAATTTATA+TGG | - | chr3_2:88140435-88140454 | Msa0435120:intron | 20.0% |
| !! | AATTTAAAAACAACAGCATA+TGG | + | chr3_2:88141147-88141166 | None:intergenic | 20.0% |
| ! | TTATTAAGTTTATCACGTGT+AGG | + | chr3_2:88137473-88137492 | None:intergenic | 25.0% |
| ! | GTTATCATTTATTCAAATCC+GGG | + | chr3_2:88138304-88138323 | None:intergenic | 25.0% |
| ! | GGTTATCATTTATTCAAATC+CGG | + | chr3_2:88138305-88138324 | None:intergenic | 25.0% |
| ! | TGAATAAATGATAACCAAAC+AGG | - | chr3_2:88138309-88138328 | Msa0435120:three_prime_UTR | 25.0% |
| ! | GAATAAATGATAACCAAACA+GGG | - | chr3_2:88138310-88138329 | Msa0435120:three_prime_UTR | 25.0% |
| !! | TCATTATACTGGTATTGAAA+TGG | + | chr3_2:88138997-88139016 | None:intergenic | 25.0% |
| ! | ATTTCATGACATTACCAAAA+GGG | - | chr3_2:88139128-88139147 | Msa0435120:three_prime_UTR | 25.0% |
| ! | AGTGCAAAAACTTTATCATA+AGG | - | chr3_2:88139557-88139576 | Msa0435120:CDS | 25.0% |
| !!! | AAGTATTGAAACAGAGTTTT+CGG | + | chr3_2:88140062-88140081 | None:intergenic | 25.0% |
| !! | ATTATTTTCTCTGAATCCTT+GGG | + | chr3_2:88140288-88140307 | None:intergenic | 25.0% |
| ! | AATTTATATGGTATGGTATC+AGG | - | chr3_2:88140447-88140466 | Msa0435120:intron | 25.0% |
| ! | GAAATATACAAAGAAGAGTT+TGG | - | chr3_2:88140523-88140542 | Msa0435120:intron | 25.0% |
| ! | GAAAAAAATGTGATAGATTG+TGG | - | chr3_2:88140709-88140728 | Msa0435120:intron | 25.0% |
| ! | ACATATGATTTAACAGAGTT+GGG | - | chr3_2:88140808-88140827 | Msa0435120:intron | 25.0% |
| !!! | ATCACTTTTATGAACAATGA+GGG | + | chr3_2:88141189-88141208 | None:intergenic | 25.0% |
| ! | AACGTACAAAATATACAGAT+AGG | - | chr3_2:88141219-88141238 | Msa0435120:five_prime_UTR | 25.0% |
| TATGTACTAGTAGTAGTAGT+TGG | - | chr3_2:88137547-88137566 | Msa0435120:three_prime_UTR | 30.0% | |
| TTATGTATCCAGTTTGAAGA+AGG | + | chr3_2:88137719-88137738 | None:intergenic | 30.0% | |
| CATGTTCATTCATAATCATG+AGG | - | chr3_2:88137801-88137820 | Msa0435120:three_prime_UTR | 30.0% | |
| AGAAAATTTGAATGTTGCCA+AGG | - | chr3_2:88138004-88138023 | Msa0435120:intron | 30.0% | |
| TGTATGTATGTAATGAGTGT+TGG | - | chr3_2:88138076-88138095 | Msa0435120:intron | 30.0% | |
| TCTCAACAATATCAAAAACC+CGG | - | chr3_2:88138283-88138302 | Msa0435120:three_prime_UTR | 30.0% | |
| !! | ATACAAAATACGGTTTTTGG+AGG | + | chr3_2:88138518-88138537 | None:intergenic | 30.0% |
| ! | GGAATACAAAATACGGTTTT+TGG | + | chr3_2:88138521-88138540 | None:intergenic | 30.0% |
| !!! | ACTTTTTCACACAATTGTCT+TGG | + | chr3_2:88138626-88138645 | None:intergenic | 30.0% |
| TAGTAATTGTGAGGTAACAA+AGG | + | chr3_2:88138790-88138809 | None:intergenic | 30.0% | |
| ! | TATACTGGTATTGAAATGGA+GGG | + | chr3_2:88138993-88139012 | None:intergenic | 30.0% |
| ! | TTATACTGGTATTGAAATGG+AGG | + | chr3_2:88138994-88139013 | None:intergenic | 30.0% |
| TTAGATATAGTAGTTCCCTT+TGG | + | chr3_2:88139057-88139076 | None:intergenic | 30.0% | |
| GATTTCATGACATTACCAAA+AGG | - | chr3_2:88139127-88139146 | Msa0435120:three_prime_UTR | 30.0% | |
| TTGAGAGTTTAGGAAAATGT+TGG | + | chr3_2:88139211-88139230 | None:intergenic | 30.0% | |
| CCTTAAGATATTGAGAGTTT+AGG | + | chr3_2:88139221-88139240 | None:intergenic | 30.0% | |
| CCTAAACTCTCAATATCTTA+AGG | - | chr3_2:88139218-88139237 | Msa0435120:intron | 30.0% | |
| ! | GATTTTCCATCACTATCTTT+GGG | + | chr3_2:88139336-88139355 | None:intergenic | 30.0% |
| ! | AGATTTTCCATCACTATCTT+TGG | + | chr3_2:88139337-88139356 | None:intergenic | 30.0% |
| TCAGTCTATGCAAATAACTT+CGG | - | chr3_2:88139362-88139381 | Msa0435120:CDS | 30.0% | |
| GGATTGGAATTAGAATCATT+AGG | + | chr3_2:88139393-88139412 | None:intergenic | 30.0% | |
| ATCCAACAAATTCTGTCTTT+CGG | + | chr3_2:88139436-88139455 | None:intergenic | 30.0% | |
| GGATGCAATGCTAAATAATA+TGG | + | chr3_2:88139496-88139515 | None:intergenic | 30.0% | |
| GAATAATTGTCACACACTAT+CGG | + | chr3_2:88139654-88139673 | None:intergenic | 30.0% | |
| ! | CTCTTCTTTTATTCCATAGT+TGG | - | chr3_2:88139673-88139692 | Msa0435120:CDS | 30.0% |
| !! | AGTATTGAAACAGAGTTTTC+GGG | + | chr3_2:88140061-88140080 | None:intergenic | 30.0% |
| GTGAAGGATTAGAATTTAGA+GGG | + | chr3_2:88140137-88140156 | None:intergenic | 30.0% | |
| AGTGAAGGATTAGAATTTAG+AGG | + | chr3_2:88140138-88140157 | None:intergenic | 30.0% | |
| ! | TTATTTTCTCTGAATCCTTG+GGG | + | chr3_2:88140287-88140306 | None:intergenic | 30.0% |
| ! | CATTATTTTCTCTGAATCCT+TGG | + | chr3_2:88140289-88140308 | None:intergenic | 30.0% |
| TTAAAAGATGACACCACAAT+TGG | + | chr3_2:88140429-88140448 | None:intergenic | 30.0% | |
| TTGTATATTTCCTCAACCAT+TGG | + | chr3_2:88140514-88140533 | None:intergenic | 30.0% | |
| ! | TTTTTCTACATGTTGTCTAG+TGG | + | chr3_2:88140695-88140714 | None:intergenic | 30.0% |
| AATGTGATAGATTGTGGAAA+TGG | - | chr3_2:88140715-88140734 | Msa0435120:intron | 30.0% | |
| CAACTCTGTTAAATCATATG+TGG | + | chr3_2:88140809-88140828 | None:intergenic | 30.0% | |
| CACATATGATTTAACAGAGT+TGG | - | chr3_2:88140807-88140826 | Msa0435120:intron | 30.0% | |
| !! | CATCACTTTTATGAACAATG+AGG | + | chr3_2:88141190-88141209 | None:intergenic | 30.0% |
| !!! | ATTGGTTCTATTTTATCTGC+AGG | - | chr3_2:88141300-88141319 | Msa0435120:five_prime_UTR | 30.0% |
| TTAAGTTTATCACGTGTAGG+AGG | + | chr3_2:88137470-88137489 | None:intergenic | 35.0% | |
| !! | AGTTGGTGTTAAGCAAGTAA+AGG | - | chr3_2:88137564-88137583 | Msa0435120:three_prime_UTR | 35.0% |
| ACATATACTCTCTCTGTTGT+TGG | - | chr3_2:88137665-88137684 | Msa0435120:three_prime_UTR | 35.0% | |
| GTTCATTCATAATCATGAGG+TGG | - | chr3_2:88137804-88137823 | Msa0435120:three_prime_UTR | 35.0% | |
| TTATTGATGTGCGTGATAGA+AGG | - | chr3_2:88137888-88137907 | Msa0435120:three_prime_UTR | 35.0% | |
| TGTACTATTCCTGATTGATC+AGG | - | chr3_2:88138124-88138143 | Msa0435120:intron | 35.0% | |
| GTACTATTCCTGATTGATCA+GGG | - | chr3_2:88138125-88138144 | Msa0435120:intron | 35.0% | |
| GATATTGTTGAGACAGTGAT+GGG | + | chr3_2:88138276-88138295 | None:intergenic | 35.0% | |
| TGATATTGTTGAGACAGTGA+TGG | + | chr3_2:88138277-88138296 | None:intergenic | 35.0% | |
| GCTAGGCTAAAAAATATGCA+TGG | + | chr3_2:88138410-88138429 | None:intergenic | 35.0% | |
| !! | AAAATACGGTTTTTGGAGGT+GGG | + | chr3_2:88138514-88138533 | None:intergenic | 35.0% |
| GATTCGTTGTAGTAATTGTG+AGG | + | chr3_2:88138799-88138818 | None:intergenic | 35.0% | |
| ACCAAGTTTAACACACCTAT+AGG | - | chr3_2:88138838-88138857 | Msa0435120:three_prime_UTR | 35.0% | |
| CAAGAGTTATCTCTTAGTCT+CGG | - | chr3_2:88138940-88138959 | Msa0435120:three_prime_UTR | 35.0% | |
| AAGAGTTATCTCTTAGTCTC+GGG | - | chr3_2:88138941-88138960 | Msa0435120:three_prime_UTR | 35.0% | |
| CAATACCAGTATAATGACAC+CGG | - | chr3_2:88139000-88139019 | Msa0435120:three_prime_UTR | 35.0% | |
| AATTCTTGTCGTCTTCCAAA+GGG | - | chr3_2:88139039-88139058 | Msa0435120:three_prime_UTR | 35.0% | |
| TCAATATCTTAAGGCTACAC+AGG | - | chr3_2:88139227-88139246 | Msa0435120:intron | 35.0% | |
| !! | TTTCCATTCCATGTTGCTTT+CGG | + | chr3_2:88139278-88139297 | None:intergenic | 35.0% |
| CAAGAAAAAATCCGCAACAT+TGG | - | chr3_2:88139300-88139319 | Msa0435120:intron | 35.0% | |
| AAAAATCCGCAACATTGGAT+TGG | - | chr3_2:88139305-88139324 | Msa0435120:intron | 35.0% | |
| GATTATCCAATCCAATGTTG+CGG | + | chr3_2:88139314-88139333 | None:intergenic | 35.0% | |
| GATAATCCCAAAGATAGTGA+TGG | - | chr3_2:88139327-88139346 | Msa0435120:CDS | 35.0% | |
| CAGTCTATGCAAATAACTTC+GGG | - | chr3_2:88139363-88139382 | Msa0435120:CDS | 35.0% | |
| AGTCTATGCAAATAACTTCG+GGG | - | chr3_2:88139364-88139383 | Msa0435120:CDS | 35.0% | |
| GCTGTCATAATAACCAACTA+TGG | + | chr3_2:88139689-88139708 | None:intergenic | 35.0% | |
| TTATTATGACAGCGATGGTT+TGG | - | chr3_2:88139696-88139715 | Msa0435120:CDS | 35.0% | |
| CTGTAATCCTTTCTTTGTAC+TGG | - | chr3_2:88139732-88139751 | Msa0435120:CDS | 35.0% | |
| ACCAAGTTCAAGTGATTCAA+AGG | - | chr3_2:88139915-88139934 | Msa0435120:CDS | 35.0% | |
| TCCTTTGAATCACTTGAACT+TGG | + | chr3_2:88139919-88139938 | None:intergenic | 35.0% | |
| AAGTGATTCAAAGGAACCTT+GGG | - | chr3_2:88139924-88139943 | Msa0435120:CDS | 35.0% | |
| CAGAGAAAATAATGCTAGCT+AGG | - | chr3_2:88140295-88140314 | Msa0435120:intron | 35.0% | |
| ! | ACTTGTTGCATTGCATAATC+AGG | - | chr3_2:88140395-88140414 | Msa0435120:intron | 35.0% |
| TTATATGGTATGGTATCAGG+TGG | - | chr3_2:88140450-88140469 | Msa0435120:intron | 35.0% | |
| TCATCTGAAAATACACTCCA+AGG | - | chr3_2:88140571-88140590 | Msa0435120:intron | 35.0% | |
| CTCCAAGGTAAAAGAGATTA+TGG | - | chr3_2:88140586-88140605 | Msa0435120:intron | 35.0% | |
| ! | GACCATAATCTCTTTTACCT+TGG | + | chr3_2:88140591-88140610 | None:intergenic | 35.0% |
| TGTGGAAATGGAAAATTGCA+TGG | - | chr3_2:88140727-88140746 | Msa0435120:intron | 35.0% | |
| !!! | CATTTTTTATGCTGAGCCTT+TGG | + | chr3_2:88140756-88140775 | None:intergenic | 35.0% |
| CAAAGGCTCAGCATAAAAAA+TGG | - | chr3_2:88140754-88140773 | Msa0435120:intron | 35.0% | |
| GACTATCATTTCACAGATTC+AGG | - | chr3_2:88140997-88141016 | Msa0435120:intron | 35.0% | |
| !! | AAAGGTATCTTATCTCTGAG+AGG | - | chr3_2:88141107-88141126 | Msa0435120:five_prime_UTR | 35.0% |
| AAACAACAGCATATGGTTTG+AGG | + | chr3_2:88141140-88141159 | None:intergenic | 35.0% | |
| GTACCGTTCTTCCAATGATA+AGG | - | chr3_2:88137610-88137629 | Msa0435120:three_prime_UTR | 40.0% | |
| CCACCTTATCATTGGAAGAA+CGG | + | chr3_2:88137616-88137635 | None:intergenic | 40.0% | |
| TCTTCCAATGATAAGGTGGT+CGG | - | chr3_2:88137617-88137636 | Msa0435120:three_prime_UTR | 40.0% | |
| AAGAAGGAAGGTGAGACAAA+TGG | + | chr3_2:88137703-88137722 | None:intergenic | 40.0% | |
| GTATCCAGTTTGAAGAAGGA+AGG | + | chr3_2:88137715-88137734 | None:intergenic | 40.0% | |
| GAAACTATGTTCTGCACAAG+TGG | - | chr3_2:88138211-88138230 | Msa0435120:intron | 40.0% | |
| !!! | AAGTGGAGTTGATGGTTTTC+TGG | - | chr3_2:88138228-88138247 | Msa0435120:intron | 40.0% |
| TCAGGCTATTAGCATATGCT+AGG | + | chr3_2:88138427-88138446 | None:intergenic | 40.0% | |
| !! | AAATACGGTTTTTGGAGGTG+GGG | + | chr3_2:88138513-88138532 | None:intergenic | 40.0% |
| !! | CAAAATACGGTTTTTGGAGG+TGG | + | chr3_2:88138515-88138534 | None:intergenic | 40.0% |
| AGACAAGATCAGCACTTGTT+GGG | + | chr3_2:88138699-88138718 | None:intergenic | 40.0% | |
| AAGACAAGATCAGCACTTGT+TGG | + | chr3_2:88138700-88138719 | None:intergenic | 40.0% | |
| CGAGGTGAACATATCCATAT+AGG | + | chr3_2:88138764-88138783 | None:intergenic | 40.0% | |
| GCCTATAGGTGTGTTAAACT+TGG | + | chr3_2:88138842-88138861 | None:intergenic | 40.0% | |
| ! | AGCATTGGAATGCTCATCAA+TGG | + | chr3_2:88138884-88138903 | None:intergenic | 40.0% |
| TACATGAGAGCTGTAAGCAT+TGG | + | chr3_2:88138899-88138918 | None:intergenic | 40.0% | |
| CGAGACTAAGAGATAACTCT+TGG | + | chr3_2:88138942-88138961 | None:intergenic | 40.0% | |
| ATTCATCAGCGATACGAAAC+CGG | + | chr3_2:88139022-88139041 | None:intergenic | 40.0% | |
| GAATTCTTGTCGTCTTCCAA+AGG | - | chr3_2:88139038-88139057 | Msa0435120:three_prime_UTR | 40.0% | |
| !! | ATTGAAAAGTGCCGAATGCA+TGG | - | chr3_2:88139086-88139105 | Msa0435120:three_prime_UTR | 40.0% |
| AGACATGCTTTCCATGCATT+CGG | + | chr3_2:88139100-88139119 | None:intergenic | 40.0% | |
| GGTAATGTCATGAAATCCTC+CGG | + | chr3_2:88139124-88139143 | None:intergenic | 40.0% | |
| AAAAACCTTGTGAATCCTGC+AGG | + | chr3_2:88139188-88139207 | None:intergenic | 40.0% | |
| ACAGGAGTTACTTGATGAGA+TGG | - | chr3_2:88139245-88139264 | Msa0435120:intron | 40.0% | |
| GTTAATGTCCGAAAGCAACA+TGG | - | chr3_2:88139267-88139286 | Msa0435120:intron | 40.0% | |
| GTCTATGCAAATAACTTCGG+GGG | - | chr3_2:88139365-88139384 | Msa0435120:CDS | 40.0% | |
| TCTATGCAAATAACTTCGGG+GGG | - | chr3_2:88139366-88139385 | Msa0435120:CDS | 40.0% | |
| GGATATCTCACAAGAAGGAT+TGG | + | chr3_2:88139409-88139428 | None:intergenic | 40.0% | |
| AGCCGAAAGACAGAATTTGT+TGG | - | chr3_2:88139431-88139450 | Msa0435120:CDS | 40.0% | |
| ! | GACAAAGCTTTTGTCCATGT+TGG | - | chr3_2:88139461-88139480 | Msa0435120:CDS | 40.0% |
| TATGGTTACCTCATCCAACA+TGG | + | chr3_2:88139478-88139497 | None:intergenic | 40.0% | |
| ! | GCATTGCATCCTTCCTTTTA+TGG | - | chr3_2:88139505-88139524 | Msa0435120:CDS | 40.0% |
| GTTGGTTATTATGACAGCGA+TGG | - | chr3_2:88139691-88139710 | Msa0435120:CDS | 40.0% | |
| CCTACAACCAGTACAAAGAA+AGG | + | chr3_2:88139742-88139761 | None:intergenic | 40.0% | |
| !! | CCTTTCTTTGTACTGGTTGT+AGG | - | chr3_2:88139739-88139758 | Msa0435120:CDS | 40.0% |
| !! | TCTTTGTACTGGTTGTAGGT+AGG | - | chr3_2:88139743-88139762 | Msa0435120:CDS | 40.0% |
| ACACCACAATTTGCATTCGA+TGG | + | chr3_2:88139790-88139809 | None:intergenic | 40.0% | |
| !! | GCAAATTGTGGTGTCATCTT+TGG | - | chr3_2:88139796-88139815 | Msa0435120:CDS | 40.0% |
| CGCAATGCAAGTGTAGTATA+TGG | + | chr3_2:88139851-88139870 | None:intergenic | 40.0% | |
| CAAGTGATTCAAAGGAACCT+TGG | - | chr3_2:88139923-88139942 | Msa0435120:CDS | 40.0% | |
| AGTGATTCAAAGGAACCTTG+GGG | - | chr3_2:88139925-88139944 | Msa0435120:CDS | 40.0% | |
| !! | TTCAGCATCTTGGTGTTATG+CGG | - | chr3_2:88140008-88140027 | Msa0435120:CDS | 40.0% |
| CTGTTTCAATACTTCGTGCT+TGG | - | chr3_2:88140068-88140087 | Msa0435120:CDS | 40.0% | |
| ATAATGCTAGCTAGGCAAAC+TGG | - | chr3_2:88140303-88140322 | Msa0435120:intron | 40.0% | |
| !! | AACTGGTTTGACAAGGAATC+AGG | - | chr3_2:88140320-88140339 | Msa0435120:intron | 40.0% |
| TCAGGTACAGTTACCAATTG+TGG | - | chr3_2:88140413-88140432 | Msa0435120:intron | 40.0% | |
| TATGGTATCAGGTGGCAAAT+TGG | - | chr3_2:88140458-88140477 | Msa0435120:intron | 40.0% | |
| TTAATGCACGTGTTCGTCTT+TGG | - | chr3_2:88140485-88140504 | Msa0435120:intron | 40.0% | |
| ! | TGTTCGTCTTTGGAAACCAA+TGG | - | chr3_2:88140495-88140514 | Msa0435120:intron | 40.0% |
| ! | TCTTTGGAAACCAATGGTTG+AGG | - | chr3_2:88140501-88140520 | Msa0435120:intron | 40.0% |
| TACATGTTGTCTAGTGGAAG+AGG | + | chr3_2:88140689-88140708 | None:intergenic | 40.0% | |
| GAAAATTGCATGGCAACCAA+AGG | - | chr3_2:88140737-88140756 | Msa0435120:intron | 40.0% | |
| GTTGGGTAACTTTACAACTG+TGG | - | chr3_2:88140825-88140844 | Msa0435120:intron | 40.0% | |
| GGTAACTTTACAACTGTGGA+TGG | - | chr3_2:88140829-88140848 | Msa0435120:intron | 40.0% | |
| AACTTTACAACTGTGGATGG+TGG | - | chr3_2:88140832-88140851 | Msa0435120:intron | 40.0% | |
| ATGCAAGAGAGACATTGTGA+TGG | + | chr3_2:88140861-88140880 | None:intergenic | 40.0% | |
| TCACAATGTCTCTCTTGCAT+TGG | - | chr3_2:88140861-88140880 | Msa0435120:intron | 40.0% | |
| TTGAGAAACTGTGAAAGCGA+TGG | - | chr3_2:88140886-88140905 | Msa0435120:intron | 40.0% | |
| ATGAATGGCATCATCAGATG+TGG | + | chr3_2:88140917-88140936 | None:intergenic | 40.0% | |
| GGAAAGCAACAACACATGTT+TGG | - | chr3_2:88141018-88141037 | Msa0435120:intron | 40.0% | |
| CCGTTCTTCCAATGATAAGG+TGG | - | chr3_2:88137613-88137632 | Msa0435120:three_prime_UTR | 45.0% | |
| AAGACCGACCACCTTATCAT+TGG | + | chr3_2:88137624-88137643 | None:intergenic | 45.0% | |
| CTCACCTTCCTTCTTCAAAC+TGG | - | chr3_2:88137708-88137727 | Msa0435120:three_prime_UTR | 45.0% | |
| CAGAGCAAGCAGAGTTTCAA+TGG | + | chr3_2:88137746-88137765 | None:intergenic | 45.0% | |
| CATTGAAACTCTGCTTGCTC+TGG | - | chr3_2:88137744-88137763 | Msa0435120:three_prime_UTR | 45.0% | |
| AGTCATGAGTGATGCGATGA+TGG | - | chr3_2:88137937-88137956 | Msa0435120:three_prime_UTR | 45.0% | |
| ! | GAGTGATGCGATGATGGTAT+TGG | - | chr3_2:88137943-88137962 | Msa0435120:three_prime_UTR | 45.0% |
| !! | GCGATGATGGTATTGGTGAA+TGG | - | chr3_2:88137950-88137969 | Msa0435120:three_prime_UTR | 45.0% |
| TTGCCAAGGTCACTATGTGT+GGG | - | chr3_2:88138018-88138037 | Msa0435120:intron | 45.0% | |
| ACAGGAATCCCTGATCAATC+AGG | + | chr3_2:88138136-88138155 | None:intergenic | 45.0% | |
| TTCTGCACAAGTGGAGTTGA+TGG | - | chr3_2:88138220-88138239 | Msa0435120:intron | 45.0% | |
| !! | AATACGGTTTTTGGAGGTGG+GGG | + | chr3_2:88138512-88138531 | None:intergenic | 45.0% |
| TTGTGAAGAGACCAGAAGTG+AGG | - | chr3_2:88138665-88138684 | Msa0435120:intron | 45.0% | |
| TCCCAACCAAGCATTCTCTT+CGG | - | chr3_2:88138735-88138754 | Msa0435120:three_prime_UTR | 45.0% | |
| ATTCTCTTCGGGGTCCTATA+TGG | - | chr3_2:88138747-88138766 | Msa0435120:three_prime_UTR | 45.0% | |
| ATAGTCACTGTGTCGCCTAT+AGG | + | chr3_2:88138856-88138875 | None:intergenic | 45.0% | |
| !! | CGAAACCGGTGTCATTATAC+TGG | + | chr3_2:88139008-88139027 | None:intergenic | 45.0% |
| ! | TGCATGGAAAGCATGTCTTC+CGG | - | chr3_2:88139102-88139121 | Msa0435120:three_prime_UTR | 45.0% |
| ! | GTTGCGAAAACACTCCCTTT+TGG | + | chr3_2:88139145-88139164 | None:intergenic | 45.0% |
| TGTCCGAAAGCAACATGGAA+TGG | - | chr3_2:88139272-88139291 | Msa0435120:intron | 45.0% | |
| GCTGAGGATATCTCACAAGA+AGG | + | chr3_2:88139414-88139433 | None:intergenic | 45.0% | |
| CAAATTCTGTCTTTCGGCTG+AGG | + | chr3_2:88139430-88139449 | None:intergenic | 45.0% | |
| ! | GCTTTTGTCCATGTTGGATG+AGG | - | chr3_2:88139467-88139486 | Msa0435120:CDS | 45.0% |
| CTGCCATCGAATGCAAATTG+TGG | - | chr3_2:88139784-88139803 | Msa0435120:CDS | 45.0% | |
| !! | TGTGGTGTCATCTTTGGACA+TGG | - | chr3_2:88139802-88139821 | Msa0435120:CDS | 45.0% |
| TCATCTTTGGACATGGTTGC+TGG | - | chr3_2:88139809-88139828 | Msa0435120:CDS | 45.0% | |
| CATCTTTGGACATGGTTGCT+GGG | - | chr3_2:88139810-88139829 | Msa0435120:CDS | 45.0% | |
| ATCTTTGGACATGGTTGCTG+GGG | - | chr3_2:88139811-88139830 | Msa0435120:CDS | 45.0% | |
| GTATTCCTTCTTGTTCCCCA+AGG | + | chr3_2:88139943-88139962 | None:intergenic | 45.0% | |
| AAGAAGGAATACCTCGTCTC+CGG | - | chr3_2:88139951-88139970 | Msa0435120:CDS | 45.0% | |
| ! | CCTTTTGTTGCCTAAGCTGT+TGG | + | chr3_2:88139985-88140004 | None:intergenic | 45.0% |
| CCAACAGCTTAGGCAACAAA+AGG | - | chr3_2:88139982-88140001 | Msa0435120:CDS | 45.0% | |
| !! | CAAAAGGCACTTCAGCATCT+TGG | - | chr3_2:88139998-88140017 | Msa0435120:CDS | 45.0% |
| !! | CTAGGCAAACTGGTTTGACA+AGG | - | chr3_2:88140313-88140332 | Msa0435120:intron | 45.0% |
| ! | TTTACAACTGTGGATGGTGG+TGG | - | chr3_2:88140835-88140854 | Msa0435120:intron | 45.0% |
| !!! | AATTTTTTTTTAAAAGAATA+AGG | - | chr3_2:88141324-88141343 | Msa0435120:five_prime_UTR | 5.0% |
| ! | TAGGAGGAAAGCGTGTGTGT+GGG | + | chr3_2:88137454-88137473 | None:intergenic | 50.0% |
| GTTGCCAAGGTCACTATGTG+TGG | - | chr3_2:88138017-88138036 | Msa0435120:intron | 50.0% | |
| TGCCAAGGTCACTATGTGTG+GGG | - | chr3_2:88138019-88138038 | Msa0435120:intron | 50.0% | |
| ! | ATCATGGGTTGTGCCCTGTT+TGG | + | chr3_2:88138326-88138345 | None:intergenic | 50.0% |
| GGGAACAAGAACCTCACTTC+TGG | + | chr3_2:88138679-88138698 | None:intergenic | 50.0% | |
| CCCGAAGAGAATGCTTGGTT+GGG | + | chr3_2:88138739-88138758 | None:intergenic | 50.0% | |
| CCCAACCAAGCATTCTCTTC+GGG | - | chr3_2:88138736-88138755 | Msa0435120:three_prime_UTR | 50.0% | |
| CCAACCAAGCATTCTCTTCG+GGG | - | chr3_2:88138737-88138756 | Msa0435120:three_prime_UTR | 50.0% | |
| GTGAGGTAACAAAGGACTCG+AGG | + | chr3_2:88138782-88138801 | None:intergenic | 50.0% | |
| GGAGGGACAGATGCATTAGA+AGG | + | chr3_2:88138976-88138995 | None:intergenic | 50.0% | |
| ! | ATGGAAAGCATGTCTTCCGG+AGG | - | chr3_2:88139105-88139124 | Msa0435120:three_prime_UTR | 50.0% |
| TCTTTGGACATGGTTGCTGG+GGG | - | chr3_2:88139812-88139831 | Msa0435120:CDS | 50.0% | |
| AGGAACCTTGGGGAACAAGA+AGG | - | chr3_2:88139935-88139954 | Msa0435120:CDS | 50.0% | |
| TAAGCTGTTGGTCCACGTAC+CGG | + | chr3_2:88139973-88139992 | None:intergenic | 50.0% | |
| !! | TTGGTGTTATGCGGCAAGCA+TGG | - | chr3_2:88140017-88140036 | Msa0435120:CDS | 50.0% |
| !! | TTTTCGGGAAGTCCTCTCTG+AGG | + | chr3_2:88140046-88140065 | None:intergenic | 50.0% |
| ! | GGTTGATACCAGTTACCCCA+AGG | - | chr3_2:88140269-88140288 | Msa0435120:intron | 50.0% |
| CTCTGAATCCTTGGGGTAAC+TGG | + | chr3_2:88140280-88140299 | None:intergenic | 50.0% | |
| ! | GTAGGAGGAAAGCGTGTGTG+TGG | + | chr3_2:88137455-88137474 | None:intergenic | 55.0% |
| GTCCCCACACATAGTGACCT+TGG | + | chr3_2:88138024-88138043 | None:intergenic | 55.0% | |
| CCCCGAAGAGAATGCTTGGT+TGG | + | chr3_2:88138740-88138759 | None:intergenic | 55.0% | |
| AGGACCCCGAAGAGAATGCT+TGG | + | chr3_2:88138744-88138763 | None:intergenic | 55.0% | |
| GGCAGTGATCTGAGGAGTGA+GGG | + | chr3_2:88139167-88139186 | None:intergenic | 55.0% | |
| AGGCAGTGATCTGAGGAGTG+AGG | + | chr3_2:88139168-88139187 | None:intergenic | 55.0% | |
| ATCCTGCAGGCAGTGATCTG+AGG | + | chr3_2:88139175-88139194 | None:intergenic | 55.0% | |
| CACTGCCTGCAGGATTCACA+AGG | - | chr3_2:88139180-88139199 | Msa0435120:intron | 55.0% | |
| AATACCTCGTCTCCGGTACG+TGG | - | chr3_2:88139958-88139977 | Msa0435120:CDS | 55.0% | |
| GGTACGTGGACCAACAGCTT+AGG | - | chr3_2:88139972-88139991 | Msa0435120:CDS | 55.0% | |
| CAAGCATGGAGACCTCAGAG+AGG | - | chr3_2:88140031-88140050 | Msa0435120:CDS | 55.0% | |
| CTCCTCAGATCACTGCCTGC+AGG | - | chr3_2:88139170-88139189 | Msa0435120:intron | 60.0% | |
| TTGGACATGGTTGCTGGGGG+TGG | - | chr3_2:88139815-88139834 | Msa0435120:CDS | 60.0% | |
| TGGTCCACGTACCGGAGACG+AGG | + | chr3_2:88139965-88139984 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 88137451 | 88141388 | 88137451 | ID=Msa0435120;Name=Msa0435120 |
| chr3_2 | mRNA | 88137451 | 88141388 | 88137451 | ID=Msa0435120-mRNA-1;Parent=Msa0435120;Name=Msa0435120-mRNA-1;_AED=0.22;_eAED=0.22;_QI=460|0.8|0.83|1|0.4|0.16|6|1206|267 |
| chr3_2 | exon | 88137451 | 88138015 | 88137451 | ID=Msa0435120-mRNA-1:exon:25906;Parent=Msa0435120-mRNA-1 |
| chr3_2 | exon | 88138247 | 88138370 | 88138247 | ID=Msa0435120-mRNA-1:exon:25905;Parent=Msa0435120-mRNA-1 |
| chr3_2 | exon | 88138498 | 88138558 | 88138498 | ID=Msa0435120-mRNA-1:exon:25904;Parent=Msa0435120-mRNA-1 |
| chr3_2 | exon | 88138726 | 88139181 | 88138726 | ID=Msa0435120-mRNA-1:exon:25903;Parent=Msa0435120-mRNA-1 |
| chr3_2 | exon | 88139306 | 88140254 | 88139306 | ID=Msa0435120-mRNA-1:exon:25902;Parent=Msa0435120-mRNA-1 |
| chr3_2 | exon | 88141074 | 88141388 | 88141074 | ID=Msa0435120-mRNA-1:exon:25901;Parent=Msa0435120-mRNA-1 |
| chr3_2 | five_prime_UTR | 88141074 | 88141388 | 88141074 | ID=Msa0435120-mRNA-1:five_prime_utr;Parent=Msa0435120-mRNA-1 |
| chr3_2 | five_prime_UTR | 88140110 | 88140254 | 88140110 | ID=Msa0435120-mRNA-1:five_prime_utr;Parent=Msa0435120-mRNA-1 |
| chr3_2 | CDS | 88139306 | 88140109 | 88139306 | ID=Msa0435120-mRNA-1:cds;Parent=Msa0435120-mRNA-1 |
| chr3_2 | three_prime_UTR | 88138726 | 88139181 | 88138726 | ID=Msa0435120-mRNA-1:three_prime_utr;Parent=Msa0435120-mRNA-1 |
| chr3_2 | three_prime_UTR | 88138498 | 88138558 | 88138498 | ID=Msa0435120-mRNA-1:three_prime_utr;Parent=Msa0435120-mRNA-1 |
| chr3_2 | three_prime_UTR | 88138247 | 88138370 | 88138247 | ID=Msa0435120-mRNA-1:three_prime_utr;Parent=Msa0435120-mRNA-1 |
| chr3_2 | three_prime_UTR | 88137451 | 88138015 | 88137451 | ID=Msa0435120-mRNA-1:three_prime_utr;Parent=Msa0435120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
