Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441720 | AES68503.1 | 87.234 | 564 | 42 | 4 | 1 | 536 | 1 | 562 | 0.0 | 1001 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441720 | sp|B0XN12|EXGA_ASPFC | 34.286 | 350 | 159 | 16 | 246 | 532 | 59 | 400 | 8.10e-42 | 158 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441720 | G7IYK6 | 87.234 | 564 | 42 | 4 | 1 | 536 | 1 | 562 | 0.0 | 1001 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0107830 | Msa0441720 | 0.800630 | 1.317153e-48 | -8.615850e-47 |
| Msa0397190 | Msa0441720 | 0.819566 | 1.085696e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441720 | MtrunA17_Chr3g0079441 | 90.467 | 493 | 24 | 3 | 65 | 536 | 1 | 491 | 0.0 | 911 |
| Msa0441720 | MtrunA17_Chr3g0079431 | 86.410 | 493 | 42 | 3 | 65 | 536 | 1 | 489 | 0.0 | 868 |
| Msa0441720 | MtrunA17_Chr3g0079451 | 79.915 | 468 | 73 | 1 | 90 | 536 | 6 | 473 | 0.0 | 775 |
| Msa0441720 | MtrunA17_Chr3g0079461 | 75.703 | 498 | 94 | 4 | 65 | 536 | 1 | 497 | 0.0 | 745 |
| Msa0441720 | MtrunA17_Chr8g0382641 | 58.084 | 501 | 176 | 5 | 70 | 536 | 6 | 506 | 0.0 | 608 |
| Msa0441720 | MtrunA17_Chr5g0425361 | 50.588 | 510 | 214 | 8 | 61 | 536 | 2 | 507 | 0.0 | 528 |
| Msa0441720 | MtrunA17_Chr5g0425401 | 50.403 | 496 | 211 | 8 | 72 | 536 | 14 | 505 | 1.92e-176 | 507 |
| Msa0441720 | MtrunA17_Chr3g0123661 | 46.414 | 502 | 226 | 12 | 73 | 536 | 9 | 505 | 2.51e-151 | 444 |
| Msa0441720 | MtrunA17_Chr5g0425351 | 36.946 | 203 | 84 | 5 | 278 | 476 | 19 | 181 | 4.91e-32 | 122 |
| Msa0441720 | MtrunA17_Chr5g0425291 | 56.364 | 55 | 23 | 1 | 276 | 330 | 19 | 72 | 7.68e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 105 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATGATCACATAAGTATT+TGG | 0.123305 | 3_3:+10196673 | None:intergenic |
| CTTCTGGTTGGGAAACATTT+AGG | 0.131349 | 3_3:-10200310 | Msa0441720:CDS |
| CTATTATTTGAGCTTCTTAT+TGG | 0.155909 | 3_3:-10201712 | Msa0441720:CDS |
| ACATATCTTTGCGCTGAAAA+TGG | 0.170576 | 3_3:-10200368 | Msa0441720:CDS |
| TTATAATCTGAAATGTTTCT+AGG | 0.192953 | 3_3:+10200084 | None:intergenic |
| TTCAGATTTATGTCACAAAA+TGG | 0.249547 | 3_3:-10197648 | Msa0441720:CDS |
| TAGAAACATTTCAGATTATA+AGG | 0.276821 | 3_3:-10200082 | Msa0441720:CDS |
| ATGATTATTCTGACATTTGT+AGG | 0.292742 | 3_3:+10195915 | None:intergenic |
| TCATAGAGTTCTTAGCAAAA+AGG | 0.293278 | 3_3:-10197245 | Msa0441720:intron |
| TTCTGGTTGGGAAACATTTA+GGG | 0.295890 | 3_3:-10200309 | Msa0441720:intron |
| CTCAAGTGGTTGATCGAAAA+TGG | 0.301104 | 3_3:-10195886 | Msa0441720:CDS |
| GCAGTTGAAGGTTCTCAAAA+TGG | 0.307654 | 3_3:-10197339 | Msa0441720:CDS |
| TATATAGTGCCCTTGGTGAT+AGG | 0.310125 | 3_3:-10201771 | Msa0441720:CDS |
| CAGATTATCAAGGCACAAAC+TGG | 0.317182 | 3_3:-10197913 | Msa0441720:CDS |
| TTTGTGCTTGGGCATATCTT+TGG | 0.317830 | 3_3:+10195980 | None:intergenic |
| AAGACTTGAGGGGCTCTATC+TGG | 0.327001 | 3_3:+10197809 | None:intergenic |
| ACATGATCACATAAGTATTT+GGG | 0.338303 | 3_3:+10196674 | None:intergenic |
| CATATCTTTGCGCTGAAAAT+GGG | 0.349908 | 3_3:-10200367 | Msa0441720:CDS |
| CAATGCCACTAATACATATA+TGG | 0.362539 | 3_3:-10202113 | Msa0441720:CDS |
| ACAAAAGGCTTAGGTGGGTT+TGG | 0.374973 | 3_3:+10197579 | None:intergenic |
| GTTGAACACCCTAAAATTGA+AGG | 0.385361 | 3_3:+10200178 | None:intergenic |
| GCTTACAAAGCTGTGAATCT+AGG | 0.387131 | 3_3:-10201654 | Msa0441720:CDS |
| GCCGACCGTAGTTCACCTTC+TGG | 0.397256 | 3_3:-10200326 | Msa0441720:CDS |
| ATAGAGCCCCTCAAGTCTTA+AGG | 0.401028 | 3_3:-10197805 | Msa0441720:CDS |
| AAGCTGTGAATCTAGGAAAC+TGG | 0.408682 | 3_3:-10201647 | Msa0441720:CDS |
| CTATCTTGATTGACACTTAG+TGG | 0.410417 | 3_3:+10196745 | None:intergenic |
| GTGTATTCTCATGCAACATT+TGG | 0.419146 | 3_3:-10195952 | Msa0441720:CDS |
| CCGTAGTTCACCTTCTGGTT+GGG | 0.427471 | 3_3:-10200321 | Msa0441720:CDS |
| TACCAACTTACTAATGGTTA+TGG | 0.439502 | 3_3:-10197833 | Msa0441720:CDS |
| AAGATATGCCCAAGCACAAA+TGG | 0.440605 | 3_3:-10195977 | Msa0441720:CDS |
| CTTCTTCTCTCATTTGTCAA+AGG | 0.444788 | 3_3:-10196625 | Msa0441720:CDS |
| ATTCGAATCAAATCATCAAA+TGG | 0.450667 | 3_3:-10200038 | Msa0441720:CDS |
| TAGAGCCCCTCAAGTCTTAA+GGG | 0.451932 | 3_3:-10197804 | Msa0441720:intron |
| TGTTTGCTTTGCAGGAGCAT+TGG | 0.457577 | 3_3:-10197695 | Msa0441720:intron |
| TTCTCACCCTTAAGACTTGA+GGG | 0.457721 | 3_3:+10197798 | None:intergenic |
| GTGGCATTGTTCTCCAATGC+AGG | 0.458219 | 3_3:+10202127 | None:intergenic |
| ATATAGTGCCCTTGGTGATA+GGG | 0.461091 | 3_3:-10201770 | Msa0441720:CDS |
| ACCGTAGTTCACCTTCTGGT+TGG | 0.463053 | 3_3:-10200322 | Msa0441720:CDS |
| TTTCAGCGCAAAGATATGTC+TGG | 0.466042 | 3_3:+10200372 | None:intergenic |
| ATACACATCCATTTGTGCTT+GGG | 0.467668 | 3_3:+10195969 | None:intergenic |
| ACAAATGTCAGAATAATCAT+TGG | 0.470733 | 3_3:-10195912 | Msa0441720:CDS |
| TAGGGGAATGGACGGTTGAA+TGG | 0.472771 | 3_3:-10196032 | Msa0441720:CDS |
| GTGGACTTGCATGCAGTTGA+AGG | 0.475672 | 3_3:-10197351 | Msa0441720:CDS |
| GACAATATCGTCAAAGCGAG+AGG | 0.476312 | 3_3:+10201599 | None:intergenic |
| TGTTGCCATATATGTATTAG+TGG | 0.480691 | 3_3:+10202108 | None:intergenic |
| TTTGTGGGGTTAAATAATAT+AGG | 0.482260 | 3_3:-10200149 | Msa0441720:CDS |
| TGAGCTATCCACCATCCAAC+AGG | 0.483400 | 3_3:+10197606 | None:intergenic |
| GACAGAGCCGGGGATCTTAG+TGG | 0.484890 | 3_3:-10196505 | Msa0441720:intron |
| AATACACATCCATTTGTGCT+TGG | 0.485189 | 3_3:+10195968 | None:intergenic |
| TTCTCATGCAACATTTGGAT+GGG | 0.487793 | 3_3:-10195947 | Msa0441720:CDS |
| GTTGCTAGGTGAATCTGAAA+AGG | 0.499593 | 3_3:+10200106 | None:intergenic |
| TGAAATGTTTCTAGGTTGCT+AGG | 0.504536 | 3_3:+10200092 | None:intergenic |
| TATTGTCAACAAAGATCTCT+TGG | 0.505063 | 3_3:-10201583 | Msa0441720:intron |
| AGAGGGTTCCATCCATCCTT+CGG | 0.507352 | 3_3:+10201617 | None:intergenic |
| CACTTGACAATGCTTTCACA+TGG | 0.508127 | 3_3:-10197539 | Msa0441720:CDS |
| AAGAGATGGATACACAGAAT+GGG | 0.509237 | 3_3:-10197298 | Msa0441720:CDS |
| GGAGAGTACCAACTTACTAA+TGG | 0.515314 | 3_3:-10197839 | Msa0441720:CDS |
| GACCATAACCATTAGTAAGT+TGG | 0.516537 | 3_3:+10197831 | None:intergenic |
| TTGTAACTTGCAGTAGGCAT+GGG | 0.516900 | 3_3:-10197386 | Msa0441720:intron |
| ATTCTCATGCAACATTTGGA+TGG | 0.518902 | 3_3:-10195948 | Msa0441720:CDS |
| TTTGTAACTTGCAGTAGGCA+TGG | 0.521597 | 3_3:-10197387 | Msa0441720:intron |
| CCTTGGTGATAGGGGCACTC+AGG | 0.525075 | 3_3:-10201761 | Msa0441720:CDS |
| TGTGATCATGTCAAATCCAT+TGG | 0.526301 | 3_3:-10196662 | Msa0441720:CDS |
| GAGGCTATATATAGTGCCCT+TGG | 0.527224 | 3_3:-10201778 | Msa0441720:CDS |
| GAGCATAGTGGGACAAGAGA+TGG | 0.527467 | 3_3:-10197312 | Msa0441720:CDS |
| ACTGGCTTGTTGCCGAAGGA+TGG | 0.534275 | 3_3:-10201629 | Msa0441720:CDS |
| ATTCTCACCCTTAAGACTTG+AGG | 0.536840 | 3_3:+10197797 | None:intergenic |
| CTGCCTTGTAATAGTTCTTG+AGG | 0.537261 | 3_3:+10196722 | None:intergenic |
| CAAGAGATGGATACACAGAA+TGG | 0.543842 | 3_3:-10197299 | Msa0441720:CDS |
| ACGGTTGAATGGAGCATACA+AGG | 0.549974 | 3_3:-10196021 | Msa0441720:CDS |
| ATATCTTTGCGCTGAAAATG+GGG | 0.554384 | 3_3:-10200366 | Msa0441720:CDS |
| AATGATGACATACCCTGCAT+TGG | 0.572372 | 3_3:-10202140 | None:intergenic |
| TATAGTGCCCTTGGTGATAG+GGG | 0.573582 | 3_3:-10201769 | Msa0441720:CDS |
| GTGGGGTTAAATAATATAGG+AGG | 0.575488 | 3_3:-10200146 | Msa0441720:CDS |
| ACAATTGTAAACACATTACA+AGG | 0.575947 | 3_3:-10197860 | Msa0441720:CDS |
| GCTTGTTGCCGAAGGATGGA+TGG | 0.578027 | 3_3:-10201625 | Msa0441720:CDS |
| CCCCAACAAAAGGCTTAGGT+GGG | 0.579618 | 3_3:+10197574 | None:intergenic |
| GGGTTAAATAATATAGGAGG+AGG | 0.582810 | 3_3:-10200143 | Msa0441720:CDS |
| TCAGTGATTGCAGATTATCA+AGG | 0.589962 | 3_3:-10197923 | Msa0441720:CDS |
| GCATGGGATGAAAGTGATTG+TGG | 0.591242 | 3_3:-10197370 | Msa0441720:CDS |
| TGGCATTGTTCTCCAATGCA+GGG | 0.598315 | 3_3:+10202128 | None:intergenic |
| GGAAACTGGCTTGTTGCCGA+AGG | 0.601833 | 3_3:-10201633 | Msa0441720:CDS |
| ACCAGAAGGTGAACTACGGT+CGG | 0.604107 | 3_3:+10200325 | None:intergenic |
| TATTGTAGTAATGCACATCA+AGG | 0.609097 | 3_3:+10196587 | None:intergenic |
| ATACTTTAAAGCTTCATCAG+AGG | 0.620040 | 3_3:-10201797 | Msa0441720:intron |
| TAGCCTCAAGAACTATTACA+AGG | 0.620823 | 3_3:-10196725 | Msa0441720:CDS |
| CCCAACCAGAAGGTGAACTA+CGG | 0.625802 | 3_3:+10200321 | None:intergenic |
| AGATTATCAAGGCACAAACT+GGG | 0.628336 | 3_3:-10197912 | Msa0441720:CDS |
| CTAAATGTTTCCCAACCAGA+AGG | 0.632163 | 3_3:+10200311 | None:intergenic |
| ATAATCATTGGAGTCTCAAG+TGG | 0.635772 | 3_3:-10195900 | Msa0441720:CDS |
| TGAGAATACCTGTTGGATGG+TGG | 0.641335 | 3_3:-10197614 | Msa0441720:CDS |
| CAGTGAGAATACCTGTTGGA+TGG | 0.643788 | 3_3:-10197617 | Msa0441720:CDS |
| TAAGCAAACGAAAGAGAGTG+AGG | 0.651768 | 3_3:+10201672 | None:intergenic |
| CTGAGTGCCCCTATCACCAA+GGG | 0.653521 | 3_3:+10201762 | None:intergenic |
| ACAATATCGTCAAAGCGAGA+GGG | 0.661818 | 3_3:+10201600 | None:intergenic |
| TCTCACCCTTAAGACTTGAG+GGG | 0.663932 | 3_3:+10197799 | None:intergenic |
| AGGCAGCTTATGATGTTGTG+AGG | 0.665952 | 3_3:-10196705 | Msa0441720:CDS |
| TATCTTTGCGCTGAAAATGG+GGG | 0.665981 | 3_3:-10200365 | Msa0441720:CDS |
| AGAGATGGATACACAGAATG+GGG | 0.667610 | 3_3:-10197297 | Msa0441720:CDS |
| ATATTCGAATACGCACATTG+AGG | 0.674161 | 3_3:+10202040 | None:intergenic |
| CCTGAGTGCCCCTATCACCA+AGG | 0.680553 | 3_3:+10201761 | None:intergenic |
| TCTATGACAGAGACTGTCTG+TGG | 0.680638 | 3_3:+10197261 | None:intergenic |
| ACTTGACAATGCTTTCACAT+GGG | 0.683824 | 3_3:-10197538 | Msa0441720:CDS |
| GATGCAGTGAGAATACCTGT+TGG | 0.688209 | 3_3:-10197621 | Msa0441720:CDS |
| CATAAGAAATGACAGAGCCG+GGG | 0.716341 | 3_3:-10196515 | Msa0441720:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTGTTAATAATAAAGA+CGG | + | chr3_3:10196654-10196673 | None:intergenic | 10.0% |
| !!! | AGTTTTTTTTTTTTTTTTTG+TGG | - | chr3_3:10197123-10197142 | Msa0441720:intron | 10.0% |
| !!! | TATATTTTTTTTTTACATAC+CGG | + | chr3_3:10197509-10197528 | None:intergenic | 10.0% |
| !!! | TAATTTTCTATAAAACTTTT+TGG | - | chr3_3:10198226-10198245 | Msa0441720:intron | 10.0% |
| !!! | TATTTTGATACATATTATTT+TGG | + | chr3_3:10198688-10198707 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAGTCAATT+TGG | - | chr3_3:10199620-10199639 | Msa0441720:intron | 10.0% |
| !! | AAAAAAAAAAAAGTCAATTT+GGG | - | chr3_3:10199621-10199640 | Msa0441720:intron | 10.0% |
| !! | AAAAAAAAAAAAAGTCAATT+TGG | - | chr3_3:10199620-10199639 | Msa0441720:intron | 10.0% |
| !! | AAAAAAAAAAAAGTCAATTT+GGG | - | chr3_3:10199621-10199640 | Msa0441720:intron | 10.0% |
| !! | AGAGATTATATTATATATTT+AGG | - | chr3_3:10201920-10201939 | Msa0441720:intron | 10.0% |
| !!! | AAATTATACTTTTTAAGACT+TGG | - | chr3_3:10196041-10196060 | Msa0441720:intron | 15.0% |
| !! | TAATATTATAACCAAAATCA+GGG | + | chr3_3:10196096-10196115 | None:intergenic | 15.0% |
| !! | TTAATATTATAACCAAAATC+AGG | + | chr3_3:10196097-10196116 | None:intergenic | 15.0% |
| !!! | CATTTTCCTATAAATTATAT+GGG | + | chr3_3:10196456-10196475 | None:intergenic | 15.0% |
| !!! | TTGTTTTAATTTAGATTGTA+AGG | - | chr3_3:10197280-10197299 | Msa0441720:CDS | 15.0% |
| !!! | TGTTTTAATTTAGATTGTAA+GGG | - | chr3_3:10197281-10197300 | Msa0441720:CDS | 15.0% |
| !!! | TTTTTATAAGTTAATTCAAG+TGG | + | chr3_3:10197339-10197358 | None:intergenic | 15.0% |
| !!! | CTTTCTTTTAAAAGTTTATA+AGG | + | chr3_3:10197372-10197391 | None:intergenic | 15.0% |
| !! | CAATAGACTATAAAAAATAT+GGG | + | chr3_3:10197412-10197431 | None:intergenic | 15.0% |
| !!! | TTTTGATATTTGATGATTTT+AGG | - | chr3_3:10197577-10197596 | Msa0441720:CDS | 15.0% |
| !!! | TAACTTGATTTTAAAGAATT+TGG | + | chr3_3:10198105-10198124 | None:intergenic | 15.0% |
| !! | ATCTTTATTATAAAGAATGT+TGG | + | chr3_3:10198415-10198434 | None:intergenic | 15.0% |
| !! | AATATGTATCAAAATAAAAG+AGG | - | chr3_3:10198692-10198711 | Msa0441720:intron | 15.0% |
| !!! | ACCAAAAATACATATTATTT+TGG | + | chr3_3:10198801-10198820 | None:intergenic | 15.0% |
| !!! | ACCAAAAATACATATTATTT+TGG | + | chr3_3:10198801-10198820 | None:intergenic | 15.0% |
| !! | AATATTTCACTATAACAAAA+AGG | + | chr3_3:10199748-10199767 | None:intergenic | 15.0% |
| !! | AATATTTCACTATAACAAAA+AGG | + | chr3_3:10199748-10199767 | None:intergenic | 15.0% |
| !!! | ACTTTTTTAAAAATCATTGT+TGG | - | chr3_3:10200260-10200279 | Msa0441720:intron | 15.0% |
| !!! | CAATTTTTTTTTACTGTTTA+TGG | + | chr3_3:10200835-10200854 | None:intergenic | 15.0% |
| !!! | ATAATTTTAAAATGACATGA+TGG | - | chr3_3:10200900-10200919 | Msa0441720:intron | 15.0% |
| !! | AATCATAAATTTACAAAGAA+AGG | + | chr3_3:10201052-10201071 | None:intergenic | 15.0% |
| !! | TATAGTAATAGAAAAAGTTT+AGG | - | chr3_3:10201216-10201235 | Msa0441720:intron | 15.0% |
| !!! | ATGATTTTACTTTTCTATTT+TGG | - | chr3_3:10201951-10201970 | Msa0441720:intron | 15.0% |
| !! | AATATTATAACCAAAATCAG+GGG | + | chr3_3:10196095-10196114 | None:intergenic | 20.0% |
| !! | ATCATTCCCATATAATTTAT+AGG | - | chr3_3:10196447-10196466 | Msa0441720:intron | 20.0% |
| !!! | GCATTTTCCTATAAATTATA+TGG | + | chr3_3:10196457-10196476 | None:intergenic | 20.0% |
| !! | TAGCATATACTATAATCAAA+TGG | + | chr3_3:10196582-10196601 | None:intergenic | 20.0% |
| !!! | GAGTACTTTAACATTTTTTT+GGG | + | chr3_3:10196782-10196801 | None:intergenic | 20.0% |
| !!! | TGAGTACTTTAACATTTTTT+TGG | + | chr3_3:10196783-10196802 | None:intergenic | 20.0% |
| !!! | AAAAAATGTTAAAGTACTCA+AGG | - | chr3_3:10196783-10196802 | Msa0441720:CDS | 20.0% |
| !!! | AAAAATGTTAAAGTACTCAA+GGG | - | chr3_3:10196784-10196803 | Msa0441720:CDS | 20.0% |
| !!! | TTTTTTAAAGTGAATAAGTG+GGG | + | chr3_3:10196906-10196925 | None:intergenic | 20.0% |
| !!! | CTTTTTTAAAGTGAATAAGT+GGG | + | chr3_3:10196907-10196926 | None:intergenic | 20.0% |
| !!! | ACTTTTTTAAAGTGAATAAG+TGG | + | chr3_3:10196908-10196927 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTCAATAGTCTAA+TGG | + | chr3_3:10196940-10196959 | None:intergenic | 20.0% |
| !! | ATTAGACTATTGACAAAAAA+AGG | - | chr3_3:10196939-10196958 | Msa0441720:intron | 20.0% |
| !! | TTAGACTATTGACAAAAAAA+GGG | - | chr3_3:10196940-10196959 | Msa0441720:intron | 20.0% |
| !! | TAGACAATGATGAATAAAAT+TGG | + | chr3_3:10196966-10196985 | None:intergenic | 20.0% |
| !!! | GTTTAATTTTAAGCCAAATA+TGG | - | chr3_3:10196986-10197005 | Msa0441720:intron | 20.0% |
| !! | TTTGTAATGCTTGATAAAAT+TGG | - | chr3_3:10197090-10197109 | Msa0441720:intron | 20.0% |
| !! | CCAATAGACTATAAAAAATA+TGG | + | chr3_3:10197413-10197432 | None:intergenic | 20.0% |
| !!! | CCATATTTTTTATAGTCTAT+TGG | - | chr3_3:10197410-10197429 | Msa0441720:intron | 20.0% |
| !!! | GTAAGTTAAGTTCTAATTTT+TGG | - | chr3_3:10197772-10197791 | Msa0441720:intron | 20.0% |
| !!! | TTATAATCTGAAATGTTTCT+AGG | + | chr3_3:10197925-10197944 | None:intergenic | 20.0% |
| !! | TAGAAACATTTCAGATTATA+AGG | - | chr3_3:10197924-10197943 | Msa0441720:CDS | 20.0% |
| !!! | TTTCTATAAAACTTTTTGGT+TGG | - | chr3_3:10198230-10198249 | Msa0441720:intron | 20.0% |
| !!! | TTTAAATTGTGTTTTTATCG+TGG | - | chr3_3:10198291-10198310 | Msa0441720:intron | 20.0% |
| !! | GTCATAAATCAAAATAAAAG+AGG | - | chr3_3:10198579-10198598 | Msa0441720:intron | 20.0% |
| !!! | GCCAAAATAATATGTATTTT+TGG | - | chr3_3:10198797-10198816 | Msa0441720:intron | 20.0% |
| !!! | ATAATATGTATTTTTGGTAG+TGG | - | chr3_3:10198803-10198822 | Msa0441720:intron | 20.0% |
| !!! | GCCAAAATAATATGTATTTT+TGG | - | chr3_3:10198797-10198816 | Msa0441720:intron | 20.0% |
| !!! | ATAATATGTATTTTTGGTAG+TGG | - | chr3_3:10198803-10198822 | Msa0441720:intron | 20.0% |
| !! | ATGCATAAATAAAATATGCA+AGG | + | chr3_3:10198930-10198949 | None:intergenic | 20.0% |
| !! | ATGTAATATAAATAGTCTAG+TGG | - | chr3_3:10199073-10199092 | Msa0441720:intron | 20.0% |
| !! | ACACTAATCATATAATCAAA+AGG | + | chr3_3:10199105-10199124 | None:intergenic | 20.0% |
| !! | TTTGATTATATGATTAGTGT+AGG | - | chr3_3:10199105-10199124 | Msa0441720:intron | 20.0% |
| !! | TTGATTATATGATTAGTGTA+GGG | - | chr3_3:10199106-10199125 | Msa0441720:intron | 20.0% |
| !! | TTCATAAAAAATGTTACTGA+GGG | + | chr3_3:10199147-10199166 | None:intergenic | 20.0% |
| !! | ATTCATAAAAAATGTTACTG+AGG | + | chr3_3:10199148-10199167 | None:intergenic | 20.0% |
| !! | TTACATACAAATATTGTTCT+TGG | - | chr3_3:10199788-10199807 | Msa0441720:intron | 20.0% |
| !! | TACATACAAATATTGTTCTT+GGG | - | chr3_3:10199789-10199808 | Msa0441720:intron | 20.0% |
| !! | AGATATGTAAAGTAATATAG+AGG | + | chr3_3:10201114-10201133 | None:intergenic | 20.0% |
| !!! | TTTTTGTGAACTAAGTTTTA+AGG | + | chr3_3:10201140-10201159 | None:intergenic | 20.0% |
| !!! | TTTTACTTTTCTATTTTGGT+AGG | - | chr3_3:10201955-10201974 | Msa0441720:intron | 20.0% |
| !!! | TTTACTTTTCTATTTTGGTA+GGG | - | chr3_3:10201956-10201975 | Msa0441720:intron | 20.0% |
| ! | TAAAATCATGCATTGTTAGT+AGG | - | chr3_3:10196114-10196133 | Msa0441720:intron | 25.0% |
| ! | GAAATAAGAATAAGAGAATG+TGG | - | chr3_3:10196155-10196174 | Msa0441720:intron | 25.0% |
| ! | CTATTATTTGAGCTTCTTAT+TGG | - | chr3_3:10196294-10196313 | Msa0441720:intron | 25.0% |
| !! | GTTGTTGCAAATAATAGTTT+TGG | + | chr3_3:10196560-10196579 | None:intergenic | 25.0% |
| ! | GACAATGCATAATATATGTA+AGG | - | chr3_3:10196733-10196752 | Msa0441720:CDS | 25.0% |
| !!! | ACTTTAACATTTTTTTGGGA+TGG | + | chr3_3:10196778-10196797 | None:intergenic | 25.0% |
| !!! | GATATTTGATGATTTTAGGA+TGG | - | chr3_3:10197581-10197600 | Msa0441720:CDS | 25.0% |
| ! | GGTAAGTAATGTATATATCT+AGG | - | chr3_3:10197718-10197737 | Msa0441720:intron | 25.0% |
| ! | GTGTTCAACAAAAAATTTGT+GGG | - | chr3_3:10197842-10197861 | Msa0441720:CDS | 25.0% |
| ! | TGTTCAACAAAAAATTTGTG+GGG | - | chr3_3:10197843-10197862 | Msa0441720:CDS | 25.0% |
| ! | TTTGTGGGGTTAAATAATAT+AGG | - | chr3_3:10197857-10197876 | Msa0441720:CDS | 25.0% |
| !!! | TGATTTGATTCGAATTTTGA+GGG | + | chr3_3:10197963-10197982 | None:intergenic | 25.0% |
| !!! | ATGATTTGATTCGAATTTTG+AGG | + | chr3_3:10197964-10197983 | None:intergenic | 25.0% |
| ! | ATTCGAATCAAATCATCAAA+TGG | - | chr3_3:10197968-10197987 | Msa0441720:intron | 25.0% |
| !!! | GATTTAAATTGATTAGCTTG+AGG | + | chr3_3:10198023-10198042 | None:intergenic | 25.0% |
| !! | AGACTTTGAAAAAATGACAT+TGG | - | chr3_3:10198141-10198160 | Msa0441720:intron | 25.0% |
| ! | CACTATATTAGAGAAAGAAT+TGG | - | chr3_3:10198177-10198196 | Msa0441720:intron | 25.0% |
| ! | AAAACTATAGTGTTTATGAG+TGG | + | chr3_3:10198363-10198382 | None:intergenic | 25.0% |
| ! | GAATTAAGAATTTCTACACA+GGG | + | chr3_3:10198393-10198412 | None:intergenic | 25.0% |
| !! | CCAGAAATTTTATCTAATCT+GGG | - | chr3_3:10198512-10198531 | Msa0441720:intron | 25.0% |
| ! | TTATGTCACATGTAAATTTG+CGG | + | chr3_3:10198549-10198568 | None:intergenic | 25.0% |
| ! | TAAATAAAATATGCAAGGTC+CGG | + | chr3_3:10198925-10198944 | None:intergenic | 25.0% |
| ! | TCATAAAAAATGTTACTGAG+GGG | + | chr3_3:10199146-10199165 | None:intergenic | 25.0% |
| ! | TATTAAAAATAGGCAAGAGT+AGG | - | chr3_3:10199192-10199211 | Msa0441720:intron | 25.0% |
| !! | TTTCAACGAATAATTTTTGC+AGG | + | chr3_3:10199225-10199244 | None:intergenic | 25.0% |
| ! | TCCTATATATATACGATGTT+AGG | + | chr3_3:10199298-10199317 | None:intergenic | 25.0% |
| ! | TCGTATATATATAGGAAATC+TGG | - | chr3_3:10199302-10199321 | Msa0441720:intron | 25.0% |
| ! | TATATATATAGGAAATCTGG+CGG | - | chr3_3:10199305-10199324 | Msa0441720:intron | 25.0% |
| ! | AAAAAAAAGTCAATTTGGGT+TGG | - | chr3_3:10199625-10199644 | Msa0441720:intron | 25.0% |
| ! | AAAAAAAAGTCAATTTGGGT+TGG | - | chr3_3:10199625-10199644 | Msa0441720:intron | 25.0% |
| ! | ATTGTCATATGAAAAACTGA+TGG | + | chr3_3:10200131-10200150 | None:intergenic | 25.0% |
| ! | ACAATTGTAAACACATTACA+AGG | - | chr3_3:10200146-10200165 | Msa0441720:CDS | 25.0% |
| ! | TTCAGATTTATGTCACAAAA+TGG | - | chr3_3:10200358-10200377 | Msa0441720:CDS | 25.0% |
| !! | GTAATCATGTGTTAGTTTAA+TGG | + | chr3_3:10200585-10200604 | None:intergenic | 25.0% |
| !!! | ATTTTAAAATGACATGATGG+AGG | - | chr3_3:10200903-10200922 | Msa0441720:intron | 25.0% |
| !!! | TTTTAAAATGACATGATGGA+GGG | - | chr3_3:10200904-10200923 | Msa0441720:intron | 25.0% |
| ! | AAGAAAGGTAAATGTTGATA+CGG | + | chr3_3:10201037-10201056 | None:intergenic | 25.0% |
| !! | CTATTACTGTGATAATGTTT+GGG | + | chr3_3:10201077-10201096 | None:intergenic | 25.0% |
| !! | ACTATTACTGTGATAATGTT+TGG | + | chr3_3:10201078-10201097 | None:intergenic | 25.0% |
| ! | AGTAATAGAAAAAGTTTAGG+AGG | - | chr3_3:10201219-10201238 | Msa0441720:intron | 25.0% |
| ! | ACATGATCACATAAGTATTT+GGG | + | chr3_3:10201335-10201354 | None:intergenic | 25.0% |
| !! | TGCATTACTACAATATGTTT+TGG | - | chr3_3:10201427-10201446 | Msa0441720:intron | 25.0% |
| !! | GCATTACTACAATATGTTTT+GGG | - | chr3_3:10201428-10201447 | Msa0441720:intron | 25.0% |
| ! | ATATATAGACCAACTAACAT+TGG | + | chr3_3:10201579-10201598 | None:intergenic | 25.0% |
| !!! | TTACTTTTCTATTTTGGTAG+GGG | - | chr3_3:10201957-10201976 | Msa0441720:intron | 25.0% |
| ! | ATGATTATTCTGACATTTGT+AGG | + | chr3_3:10202094-10202113 | None:intergenic | 25.0% |
| ! | ACAAATGTCAGAATAATCAT+TGG | - | chr3_3:10202094-10202113 | Msa0441720:CDS | 25.0% |
| CAATGCCACTAATACATATA+TGG | - | chr3_3:10195893-10195912 | Msa0441720:CDS | 30.0% | |
| TGTTGCCATATATGTATTAG+TGG | + | chr3_3:10195901-10195920 | None:intergenic | 30.0% | |
| !! | ATACTTTAAAGCTTCATCAG+AGG | - | chr3_3:10196209-10196228 | Msa0441720:intron | 30.0% |
| ACTCAGGATCATTCAAAAAA+TGG | - | chr3_3:10196261-10196280 | Msa0441720:intron | 30.0% | |
| TATTGTCAACAAAGATCTCT+TGG | - | chr3_3:10196423-10196442 | Msa0441720:intron | 30.0% | |
| !!! | GTTGCAAATAATAGTTTTGG+TGG | + | chr3_3:10196557-10196576 | None:intergenic | 30.0% |
| GCTCGTAGTAAAAAATCAAT+TGG | + | chr3_3:10196865-10196884 | None:intergenic | 30.0% | |
| !!! | ATTGATTTTTTACTACGAGC+TGG | - | chr3_3:10196865-10196884 | Msa0441720:intron | 30.0% |
| GTAATGCTTGATAAAATTGG+TGG | - | chr3_3:10197093-10197112 | Msa0441720:intron | 30.0% | |
| CATAAAATATGCAAGGTTTG+GGG | + | chr3_3:10197164-10197183 | None:intergenic | 30.0% | |
| GCATAAAATATGCAAGGTTT+GGG | + | chr3_3:10197165-10197184 | None:intergenic | 30.0% | |
| TGCATAAAATATGCAAGGTT+TGG | + | chr3_3:10197166-10197185 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr3_3:10197171-10197190 | None:intergenic | 30.0% | |
| AATCTTGTCTTGATTACACT+TGG | - | chr3_3:10197750-10197769 | Msa0441720:intron | 30.0% | |
| ! | ATGACTCATCCTTCAATTTT+AGG | - | chr3_3:10197819-10197838 | Msa0441720:CDS | 30.0% |
| ! | TGACTCATCCTTCAATTTTA+GGG | - | chr3_3:10197820-10197839 | Msa0441720:CDS | 30.0% |
| GGTGTTCAACAAAAAATTTG+TGG | - | chr3_3:10197841-10197860 | Msa0441720:CDS | 30.0% | |
| !! | GATTTGATTCGAATTTTGAG+GGG | + | chr3_3:10197962-10197981 | None:intergenic | 30.0% |
| !! | TAAATTGATTAGCTTGAGGA+TGG | + | chr3_3:10198019-10198038 | None:intergenic | 30.0% |
| AGAATTTGGTCTCTTATGAT+TGG | + | chr3_3:10198091-10198110 | None:intergenic | 30.0% | |
| !! | ATGACATTGGTCTCATATTT+TGG | - | chr3_3:10198154-10198173 | Msa0441720:intron | 30.0% |
| GGAATTAAGAATTTCTACAC+AGG | + | chr3_3:10198394-10198413 | None:intergenic | 30.0% | |
| ! | GCCAGAAATTTTATCTAATC+TGG | - | chr3_3:10198511-10198530 | Msa0441720:intron | 30.0% |
| CCCAGATTAGATAAAATTTC+TGG | + | chr3_3:10198515-10198534 | None:intergenic | 30.0% | |
| ! | AACCTGCCAAAATAATTTGT+TGG | - | chr3_3:10198653-10198672 | Msa0441720:intron | 30.0% |
| !! | ACCTGCCAAAATAATTTGTT+GGG | - | chr3_3:10198654-10198673 | Msa0441720:intron | 30.0% |
| ! | AACCTGCCAAAATAATTTGT+TGG | - | chr3_3:10198653-10198672 | Msa0441720:intron | 30.0% |
| !! | ACCTGCCAAAATAATTTGTT+GGG | - | chr3_3:10198654-10198673 | Msa0441720:intron | 30.0% |
| AAATAAAATATGCAAGGTCC+GGG | + | chr3_3:10198924-10198943 | None:intergenic | 30.0% | |
| GATATATCACAAAATTCCCT+TGG | + | chr3_3:10199271-10199290 | None:intergenic | 30.0% | |
| GCCTAACATCGTATATATAT+AGG | - | chr3_3:10199294-10199313 | Msa0441720:intron | 30.0% | |
| GAAATGAATTCTACGTAATG+TGG | - | chr3_3:10199440-10199459 | Msa0441720:intron | 30.0% | |
| TACAAATATTGTTCTTGGGT+TGG | - | chr3_3:10199793-10199812 | Msa0441720:intron | 30.0% | |
| ATTGAACCTTCACACATATA+TGG | + | chr3_3:10200055-10200074 | None:intergenic | 30.0% | |
| TACCAACTTACTAATGGTTA+TGG | - | chr3_3:10200173-10200192 | Msa0441720:CDS | 30.0% | |
| AGCTCAAAATTAAGATGATG+TGG | + | chr3_3:10200290-10200309 | None:intergenic | 30.0% | |
| ! | ATACATTTGTAACTTGCAGT+AGG | - | chr3_3:10200614-10200633 | Msa0441720:intron | 30.0% |
| !!! | AAAATGGTTTTGAGCATAGT+GGG | - | chr3_3:10200683-10200702 | Msa0441720:intron | 30.0% |
| TCATAGAGTTCTTAGCAAAA+AGG | - | chr3_3:10200761-10200780 | Msa0441720:intron | 30.0% | |
| ! | TAAAGATATCAGTTTCGAGT+AGG | + | chr3_3:10201171-10201190 | None:intergenic | 30.0% |
| GACATGATCACATAAGTATT+TGG | + | chr3_3:10201336-10201355 | None:intergenic | 30.0% | |
| TATTGTAGTAATGCACATCA+AGG | + | chr3_3:10201422-10201441 | None:intergenic | 30.0% | |
| !!! | ATGTTTTGGGACAAATTCAA+TGG | - | chr3_3:10201441-10201460 | Msa0441720:intron | 30.0% |
| !!! | TCAAATGCTCTTAGTTTTGT+AGG | - | chr3_3:10201534-10201553 | Msa0441720:intron | 30.0% |
| ATATTCGAATACGCACATTG+AGG | + | chr3_3:10195969-10195988 | None:intergenic | 35.0% | |
| ! | CTTTGAGAAGATTGTTGAAG+AGG | - | chr3_3:10195989-10196008 | Msa0441720:CDS | 35.0% |
| TGTTGAAGAGGATACAACAA+AGG | - | chr3_3:10196001-10196020 | Msa0441720:CDS | 35.0% | |
| !! | AGCCAGGTTTTATAAATTGG+GGG | + | chr3_3:10196069-10196088 | None:intergenic | 35.0% |
| !! | GAGCCAGGTTTTATAAATTG+GGG | + | chr3_3:10196070-10196089 | None:intergenic | 35.0% |
| !! | GGAGCCAGGTTTTATAAATT+GGG | + | chr3_3:10196071-10196090 | None:intergenic | 35.0% |
| ATTATAACCAAAATCAGGGG+CGG | + | chr3_3:10196092-10196111 | None:intergenic | 35.0% | |
| CTTATTTCCTAGTGTCAAGA+TGG | + | chr3_3:10196143-10196162 | None:intergenic | 35.0% | |
| AAACATGTTAAGAGCTCAGT+TGG | - | chr3_3:10196706-10196725 | Msa0441720:CDS | 35.0% | |
| CATAATATATGTAAGGCCCA+GGG | - | chr3_3:10196740-10196759 | Msa0441720:CDS | 35.0% | |
| ACTCAAGGGAAAATGATGAT+AGG | - | chr3_3:10196798-10196817 | Msa0441720:intron | 35.0% | |
| GAGAATTTGTATCTTGAACG+AGG | + | chr3_3:10196833-10196852 | None:intergenic | 35.0% | |
| AGTAAAAAATCAATTGGCCG+TGG | + | chr3_3:10196859-10196878 | None:intergenic | 35.0% | |
| GCTTGGTCTATTTCCATATT+TGG | + | chr3_3:10197002-10197021 | None:intergenic | 35.0% | |
| CCAAGCTGATGAACTTATAA+CGG | - | chr3_3:10197016-10197035 | Msa0441720:intron | 35.0% | |
| !!! | TTTTTTTTTTGTGGTTCCCG+AGG | - | chr3_3:10197132-10197151 | Msa0441720:intron | 35.0% |
| !!! | ATATGTTTTGTTTAGCCCCA+TGG | - | chr3_3:10197483-10197502 | Msa0441720:intron | 35.0% |
| !!! | TTTTTTTACATACCGGCCAT+GGG | + | chr3_3:10197502-10197521 | None:intergenic | 35.0% |
| !!! | TTTTTTTTACATACCGGCCA+TGG | + | chr3_3:10197503-10197522 | None:intergenic | 35.0% |
| ACATATCTTTGCGCTGAAAA+TGG | - | chr3_3:10197638-10197657 | Msa0441720:CDS | 35.0% | |
| CATATCTTTGCGCTGAAAAT+GGG | - | chr3_3:10197639-10197658 | Msa0441720:CDS | 35.0% | |
| ATATCTTTGCGCTGAAAATG+GGG | - | chr3_3:10197640-10197659 | Msa0441720:CDS | 35.0% | |
| ! | TTCTGGTTGGGAAACATTTA+GGG | - | chr3_3:10197697-10197716 | Msa0441720:intron | 35.0% |
| GTTGAACACCCTAAAATTGA+AGG | + | chr3_3:10197831-10197850 | None:intergenic | 35.0% | |
| GTGGGGTTAAATAATATAGG+AGG | - | chr3_3:10197860-10197879 | Msa0441720:CDS | 35.0% | |
| GGGTTAAATAATATAGGAGG+AGG | - | chr3_3:10197863-10197882 | Msa0441720:CDS | 35.0% | |
| !! | TGAAATGTTTCTAGGTTGCT+AGG | + | chr3_3:10197917-10197936 | None:intergenic | 35.0% |
| GATTATTGCACATAGCCAAT+TGG | - | chr3_3:10198252-10198271 | Msa0441720:intron | 35.0% | |
| ! | TTTTTATCGTGGAGACTCAT+TGG | - | chr3_3:10198302-10198321 | Msa0441720:intron | 35.0% |
| GTCAAAAAGATCAAACCAAG+AGG | - | chr3_3:10198324-10198343 | Msa0441720:intron | 35.0% | |
| ACTATAGTGTTTATGAGTGG+TGG | + | chr3_3:10198360-10198379 | None:intergenic | 35.0% | |
| !! | CCTGCCAAAATAATTTGTTG+GGG | - | chr3_3:10198655-10198674 | Msa0441720:intron | 35.0% |
| !! | CCAAAATAATTTGTTGGGGT+GGG | - | chr3_3:10198659-10198678 | Msa0441720:intron | 35.0% |
| !! | CAAAATAATTTGTTGGGGTG+GGG | - | chr3_3:10198660-10198679 | Msa0441720:intron | 35.0% |
| !! | CCTGCCAAAATAATTTGTTG+GGG | - | chr3_3:10198655-10198674 | Msa0441720:intron | 35.0% |
| !! | CCAAAATAATTTGTTGGGGT+GGG | - | chr3_3:10198659-10198678 | Msa0441720:intron | 35.0% |
| !! | CAAAATAATTTGTTGGGGTG+GGG | - | chr3_3:10198660-10198679 | Msa0441720:intron | 35.0% |
| !!! | TATGTATTTTTGGTAGTGGC+CGG | - | chr3_3:10198807-10198826 | Msa0441720:intron | 35.0% |
| !!! | TATGTATTTTTGGTAGTGGC+CGG | - | chr3_3:10198807-10198826 | Msa0441720:intron | 35.0% |
| AATAAAATATGCAAGGTCCG+GGG | + | chr3_3:10198923-10198942 | None:intergenic | 35.0% | |
| !! | TTTCTAAAGTGTGAGATCCA+GGG | + | chr3_3:10199424-10199443 | None:intergenic | 35.0% |
| !! | ATTTCTAAAGTGTGAGATCC+AGG | + | chr3_3:10199425-10199444 | None:intergenic | 35.0% |
| ! | GGGTTTATTCGCTCTTTTAT+TGG | + | chr3_3:10199487-10199506 | None:intergenic | 35.0% |
| TCAGTGATTGCAGATTATCA+AGG | - | chr3_3:10200083-10200102 | Msa0441720:CDS | 35.0% | |
| AGATTATCAAGGCACAAACT+GGG | - | chr3_3:10200094-10200113 | Msa0441720:CDS | 35.0% | |
| GACCATAACCATTAGTAAGT+TGG | + | chr3_3:10200178-10200197 | None:intergenic | 35.0% | |
| ACTTGACAATGCTTTCACAT+GGG | - | chr3_3:10200468-10200487 | Msa0441720:intron | 35.0% | |
| !!! | CAAAATGGTTTTGAGCATAG+TGG | - | chr3_3:10200682-10200701 | Msa0441720:intron | 35.0% |
| AAGAGATGGATACACAGAAT+GGG | - | chr3_3:10200708-10200727 | Msa0441720:intron | 35.0% | |
| ATACGGAAACCAAAACTACA+GGG | + | chr3_3:10201020-10201039 | None:intergenic | 35.0% | |
| CTATCTTGATTGACACTTAG+TGG | + | chr3_3:10201264-10201283 | None:intergenic | 35.0% | |
| TAGCCTCAAGAACTATTACA+AGG | - | chr3_3:10201281-10201300 | Msa0441720:intron | 35.0% | |
| TGTGATCATGTCAAATCCAT+TGG | - | chr3_3:10201344-10201363 | Msa0441720:intron | 35.0% | |
| !!! | GAGAAGAAGTTTTGAATCTG+TGG | + | chr3_3:10201370-10201389 | None:intergenic | 35.0% |
| CTTCTTCTCTCATTTGTCAA+AGG | - | chr3_3:10201381-10201400 | Msa0441720:intron | 35.0% | |
| TACATAAGAAATGACAGAGC+CGG | - | chr3_3:10201489-10201508 | Msa0441720:intron | 35.0% | |
| AAATCCTTGCCAATGTTAGT+TGG | - | chr3_3:10201567-10201586 | Msa0441720:intron | 35.0% | |
| !!! | TTTCTATTTTGGTAGGGGAA+TGG | - | chr3_3:10201962-10201981 | Msa0441720:intron | 35.0% |
| ATACACATCCATTTGTGCTT+GGG | + | chr3_3:10202040-10202059 | None:intergenic | 35.0% | |
| AATACACATCCATTTGTGCT+TGG | + | chr3_3:10202041-10202060 | None:intergenic | 35.0% | |
| GTGTATTCTCATGCAACATT+TGG | - | chr3_3:10202054-10202073 | Msa0441720:CDS | 35.0% | |
| ATTCTCATGCAACATTTGGA+TGG | - | chr3_3:10202058-10202077 | Msa0441720:CDS | 35.0% | |
| TTCTCATGCAACATTTGGAT+GGG | - | chr3_3:10202059-10202078 | Msa0441720:CDS | 35.0% | |
| ATAATCATTGGAGTCTCAAG+TGG | - | chr3_3:10202106-10202125 | Msa0441720:CDS | 35.0% | |
| GGATACAACAAAGGATGCAT+AGG | - | chr3_3:10196010-10196029 | Msa0441720:CDS | 40.0% | |
| TCCCCCCAATTTATAAAACC+TGG | - | chr3_3:10196064-10196083 | Msa0441720:intron | 40.0% | |
| !! | GCCAGGTTTTATAAATTGGG+GGG | + | chr3_3:10196068-10196087 | None:intergenic | 40.0% |
| !! | CGGAGCCAGGTTTTATAAAT+TGG | + | chr3_3:10196072-10196091 | None:intergenic | 40.0% |
| ! | TATATAGTGCCCTTGGTGAT+AGG | - | chr3_3:10196235-10196254 | Msa0441720:intron | 40.0% |
| ! | ATATAGTGCCCTTGGTGATA+GGG | - | chr3_3:10196236-10196255 | Msa0441720:intron | 40.0% |
| TAAGCAAACGAAAGAGAGTG+AGG | + | chr3_3:10196337-10196356 | None:intergenic | 40.0% | |
| GCTTACAAAGCTGTGAATCT+AGG | - | chr3_3:10196352-10196371 | Msa0441720:intron | 40.0% | |
| AAGCTGTGAATCTAGGAAAC+TGG | - | chr3_3:10196359-10196378 | Msa0441720:intron | 40.0% | |
| ACAATATCGTCAAAGCGAGA+GGG | + | chr3_3:10196409-10196428 | None:intergenic | 40.0% | |
| ! | TGTTAAGAGCTCAGTTGGTA+CGG | - | chr3_3:10196711-10196730 | Msa0441720:CDS | 40.0% |
| GCATAATATATGTAAGGCCC+AGG | - | chr3_3:10196739-10196758 | Msa0441720:CDS | 40.0% | |
| CAAGGGAAAATGATGATAGG+TGG | - | chr3_3:10196801-10196820 | Msa0441720:intron | 40.0% | |
| AGATACAAATTCTCCCACCA+CGG | - | chr3_3:10196839-10196858 | Msa0441720:intron | 40.0% | |
| AAAAATCAATTGGCCGTGGT+GGG | + | chr3_3:10196855-10196874 | None:intergenic | 40.0% | |
| AAAAAATCAATTGGCCGTGG+TGG | + | chr3_3:10196856-10196875 | None:intergenic | 40.0% | |
| CCGTTATAAGTTCATCAGCT+TGG | + | chr3_3:10197019-10197038 | None:intergenic | 40.0% | |
| ! | TGAGCTTAGCTCAGTTGATA+TGG | + | chr3_3:10197193-10197212 | None:intergenic | 40.0% |
| TTGGACAAAAAGTTTGCCCA+TGG | - | chr3_3:10197429-10197448 | Msa0441720:intron | 40.0% | |
| TGGACAAAAAGTTTGCCCAT+GGG | - | chr3_3:10197430-10197449 | Msa0441720:intron | 40.0% | |
| TTGTCTCTCACTAAACCCAT+GGG | + | chr3_3:10197448-10197467 | None:intergenic | 40.0% | |
| TTTGTCTCTCACTAAACCCA+TGG | + | chr3_3:10197449-10197468 | None:intergenic | 40.0% | |
| !!! | TTTTTTACATACCGGCCATG+GGG | + | chr3_3:10197501-10197520 | None:intergenic | 40.0% |
| TTTCAGCGCAAAGATATGTC+TGG | + | chr3_3:10197637-10197656 | None:intergenic | 40.0% | |
| TATCTTTGCGCTGAAAATGG+GGG | - | chr3_3:10197641-10197660 | Msa0441720:CDS | 40.0% | |
| CTAAATGTTTCCCAACCAGA+AGG | + | chr3_3:10197698-10197717 | None:intergenic | 40.0% | |
| ! | CTTCTGGTTGGGAAACATTT+AGG | - | chr3_3:10197696-10197715 | Msa0441720:intron | 40.0% |
| !!! | TTTTGGCTCATTTGCAGCTT+TGG | - | chr3_3:10197789-10197808 | Msa0441720:intron | 40.0% |
| GTTGCTAGGTGAATCTGAAA+AGG | + | chr3_3:10197903-10197922 | None:intergenic | 40.0% | |
| TTATTCGATGTGACTCGTGT+GGG | - | chr3_3:10198472-10198491 | Msa0441720:intron | 40.0% | |
| !!! | CCCCAACAAATTATTTTGGC+AGG | + | chr3_3:10198658-10198677 | None:intergenic | 40.0% |
| !! | GCCAAAATAATTTGTTGGGG+TGG | - | chr3_3:10198658-10198677 | Msa0441720:intron | 40.0% |
| ! | CCCACCCCAACAAATTATTT+TGG | + | chr3_3:10198662-10198681 | None:intergenic | 40.0% |
| !!! | CCCCAACAAATTATTTTGGC+AGG | + | chr3_3:10198658-10198677 | None:intergenic | 40.0% |
| !! | GCCAAAATAATTTGTTGGGG+TGG | - | chr3_3:10198658-10198677 | Msa0441720:intron | 40.0% |
| ! | CCCACCCCAACAAATTATTT+TGG | + | chr3_3:10198662-10198681 | None:intergenic | 40.0% |
| !!! | ATGTATTTTTGGTAGTGGCC+GGG | - | chr3_3:10198808-10198827 | Msa0441720:intron | 40.0% |
| !!! | ATGTATTTTTGGTAGTGGCC+GGG | - | chr3_3:10198808-10198827 | Msa0441720:intron | 40.0% |
| CAAAATTCCCTTGGTTGCAA+TGG | + | chr3_3:10199262-10199281 | None:intergenic | 40.0% | |
| AAAGAGCGAATAAACCCACT+TGG | - | chr3_3:10199490-10199509 | Msa0441720:intron | 40.0% | |
| AAGAGCGAATAAACCCACTT+GGG | - | chr3_3:10199491-10199510 | Msa0441720:intron | 40.0% | |
| ! | ATTCTCACCGGTGTCAATTT+GGG | - | chr3_3:10199575-10199594 | Msa0441720:intron | 40.0% |
| ACTCTCTTTCTAATACTCGC+AGG | + | chr3_3:10199718-10199737 | None:intergenic | 40.0% | |
| ACTCTCTTTCTAATACTCGC+AGG | + | chr3_3:10199718-10199737 | None:intergenic | 40.0% | |
| CCTTCACACATATATGGTCA+AGG | + | chr3_3:10200049-10200068 | None:intergenic | 40.0% | |
| CCTTGACCATATATGTGTGA+AGG | - | chr3_3:10200046-10200065 | Msa0441720:CDS | 40.0% | |
| CAGATTATCAAGGCACAAAC+TGG | - | chr3_3:10200093-10200112 | Msa0441720:CDS | 40.0% | |
| !! | GGAGAGTACCAACTTACTAA+TGG | - | chr3_3:10200167-10200186 | Msa0441720:CDS | 40.0% |
| TTCTCACCCTTAAGACTTGA+GGG | + | chr3_3:10200211-10200230 | None:intergenic | 40.0% | |
| ATTCTCACCCTTAAGACTTG+AGG | + | chr3_3:10200212-10200231 | None:intergenic | 40.0% | |
| !! | TTGAGCTTTGTTTGCTTTGC+AGG | - | chr3_3:10200303-10200322 | Msa0441720:intron | 40.0% |
| CACTTGACAATGCTTTCACA+TGG | - | chr3_3:10200467-10200486 | Msa0441720:intron | 40.0% | |
| ! | TTTGTAACTTGCAGTAGGCA+TGG | - | chr3_3:10200619-10200638 | Msa0441720:intron | 40.0% |
| ! | TTGTAACTTGCAGTAGGCAT+GGG | - | chr3_3:10200620-10200639 | Msa0441720:intron | 40.0% |
| GCAGTTGAAGGTTCTCAAAA+TGG | - | chr3_3:10200667-10200686 | Msa0441720:intron | 40.0% | |
| CAAGAGATGGATACACAGAA+TGG | - | chr3_3:10200707-10200726 | Msa0441720:intron | 40.0% | |
| AGAGATGGATACACAGAATG+GGG | - | chr3_3:10200709-10200728 | Msa0441720:intron | 40.0% | |
| ! | TCTCTATCTCCCTGTAGTTT+TGG | - | chr3_3:10201008-10201027 | Msa0441720:intron | 40.0% |
| GATACGGAAACCAAAACTAC+AGG | + | chr3_3:10201021-10201040 | None:intergenic | 40.0% | |
| CTGCCTTGTAATAGTTCTTG+AGG | + | chr3_3:10201287-10201306 | None:intergenic | 40.0% | |
| !!! | AGTTTTGAATCTGTGGCCAA+TGG | + | chr3_3:10201363-10201382 | None:intergenic | 40.0% |
| ACATAAGAAATGACAGAGCC+GGG | - | chr3_3:10201490-10201509 | Msa0441720:intron | 40.0% | |
| AGAAAAACCACTAAGATCCC+CGG | + | chr3_3:10201511-10201530 | None:intergenic | 40.0% | |
| TAGACCAACTAACATTGGCA+AGG | + | chr3_3:10201574-10201593 | None:intergenic | 40.0% | |
| !!! | TATTTTGGTAGGGGAATGGA+CGG | - | chr3_3:10201966-10201985 | Msa0441720:intron | 40.0% |
| TTTGTGCTTGGGCATATCTT+TGG | + | chr3_3:10202029-10202048 | None:intergenic | 40.0% | |
| AAGATATGCCCAAGCACAAA+TGG | - | chr3_3:10202029-10202048 | Msa0441720:CDS | 40.0% | |
| !! | CAACATTTGGATGGGCTTTT+TGG | - | chr3_3:10202067-10202086 | Msa0441720:CDS | 40.0% |
| CTCAAGTGGTTGATCGAAAA+TGG | - | chr3_3:10202120-10202139 | Msa0441720:CDS | 40.0% | |
| TGGCATTGTTCTCCAATGCA+GGG | + | chr3_3:10195881-10195900 | None:intergenic | 45.0% | |
| TAGGCATCCATCTTGACACT+AGG | - | chr3_3:10196133-10196152 | Msa0441720:intron | 45.0% | |
| GAGGCTATATATAGTGCCCT+TGG | - | chr3_3:10196228-10196247 | Msa0441720:intron | 45.0% | |
| ! | TATAGTGCCCTTGGTGATAG+GGG | - | chr3_3:10196237-10196256 | Msa0441720:intron | 45.0% |
| GACAATATCGTCAAAGCGAG+AGG | + | chr3_3:10196410-10196429 | None:intergenic | 45.0% | |
| !!! | ACATTTTTTTGGGATGGCCG+AGG | + | chr3_3:10196772-10196791 | None:intergenic | 45.0% |
| ! | AAGGTTTGGGGTTCAAACCT+CGG | + | chr3_3:10197152-10197171 | None:intergenic | 45.0% |
| CACTACTGTCACACTCCAAT+TGG | + | chr3_3:10198270-10198289 | None:intergenic | 45.0% | |
| CAATTGGAGTGTGACAGTAG+TGG | - | chr3_3:10198268-10198287 | Msa0441720:intron | 45.0% | |
| CTTATTCGATGTGACTCGTG+TGG | - | chr3_3:10198471-10198490 | Msa0441720:intron | 45.0% | |
| !! | AAAATTTCTGGCTCCGCCAT+TGG | + | chr3_3:10198503-10198522 | None:intergenic | 45.0% |
| !!! | TGTATTTTTGGTAGTGGCCG+GGG | - | chr3_3:10198809-10198828 | Msa0441720:intron | 45.0% |
| !!! | TGTATTTTTGGTAGTGGCCG+GGG | - | chr3_3:10198809-10198828 | Msa0441720:intron | 45.0% |
| TGAGCTTAGCTCAGTTGGTT+GGG | + | chr3_3:10198956-10198975 | None:intergenic | 45.0% | |
| GTTACTGAGGGGAATTGAAC+TGG | + | chr3_3:10199135-10199154 | None:intergenic | 45.0% | |
| TTCCCTTGGTTGCAATGGAA+GGG | + | chr3_3:10199257-10199276 | None:intergenic | 45.0% | |
| ATTCCCTTGGTTGCAATGGA+AGG | + | chr3_3:10199258-10199277 | None:intergenic | 45.0% | |
| ! | ATTTACCACCCAACTAGCCT+GGG | + | chr3_3:10199397-10199416 | None:intergenic | 45.0% |
| TAAAGTGTGAGATCCAGGGA+CGG | + | chr3_3:10199420-10199439 | None:intergenic | 45.0% | |
| ! | GATTCTCACCGGTGTCAATT+TGG | - | chr3_3:10199574-10199593 | Msa0441720:intron | 45.0% |
| TAGCCAACCCAAATTGACAC+CGG | + | chr3_3:10199585-10199604 | None:intergenic | 45.0% | |
| ATAGAGCCCCTCAAGTCTTA+AGG | - | chr3_3:10200201-10200220 | Msa0441720:CDS | 45.0% | |
| TAGAGCCCCTCAAGTCTTAA+GGG | - | chr3_3:10200202-10200221 | Msa0441720:CDS | 45.0% | |
| TCTCACCCTTAAGACTTGAG+GGG | + | chr3_3:10200210-10200229 | None:intergenic | 45.0% | |
| ! | TGTTTGCTTTGCAGGAGCAT+TGG | - | chr3_3:10200311-10200330 | Msa0441720:CDS | 45.0% |
| GATGCAGTGAGAATACCTGT+TGG | - | chr3_3:10200385-10200404 | Msa0441720:CDS | 45.0% | |
| CAGTGAGAATACCTGTTGGA+TGG | - | chr3_3:10200389-10200408 | Msa0441720:CDS | 45.0% | |
| TGAGAATACCTGTTGGATGG+TGG | - | chr3_3:10200392-10200411 | Msa0441720:CDS | 45.0% | |
| ! | ACAAAAGGCTTAGGTGGGTT+TGG | + | chr3_3:10200430-10200449 | None:intergenic | 45.0% |
| ! | AACCCACCTAAGCCTTTTGT+TGG | - | chr3_3:10200430-10200449 | Msa0441720:intron | 45.0% |
| ! | ACCCACCTAAGCCTTTTGTT+GGG | - | chr3_3:10200431-10200450 | Msa0441720:intron | 45.0% |
| GCATGGGATGAAAGTGATTG+TGG | - | chr3_3:10200636-10200655 | Msa0441720:intron | 45.0% | |
| TCTATGACAGAGACTGTCTG+TGG | + | chr3_3:10200748-10200767 | None:intergenic | 45.0% | |
| AGGCAGCTTATGATGTTGTG+AGG | - | chr3_3:10201301-10201320 | Msa0441720:intron | 45.0% | |
| CATAAGAAATGACAGAGCCG+GGG | - | chr3_3:10201491-10201510 | Msa0441720:intron | 45.0% | |
| ACGGTTGAATGGAGCATACA+AGG | - | chr3_3:10201985-10202004 | Msa0441720:intron | 45.0% | |
| !!! | ATTTATATTACATATTATTT+TGG | + | chr3_3:10198988-10199007 | None:intergenic | 5.0% |
| !! | ATAGTAAAAATATTAAAAAT+AGG | - | chr3_3:10199182-10199201 | Msa0441720:intron | 5.0% |
| !! | AATAAATAGTAAAAAATTAT+TGG | - | chr3_3:10200859-10200878 | Msa0441720:intron | 5.0% |
| GTGGCATTGTTCTCCAATGC+AGG | + | chr3_3:10195882-10195901 | None:intergenic | 50.0% | |
| AGAGGGTTCCATCCATCCTT+CGG | + | chr3_3:10196392-10196411 | None:intergenic | 50.0% | |
| ! | GTGAATAAGTGGGGTGTCAG+AGG | + | chr3_3:10196897-10196916 | None:intergenic | 50.0% |
| ! | AGGTTTGGGGTTCAAACCTC+GGG | + | chr3_3:10197151-10197170 | None:intergenic | 50.0% |
| TCAACTGAGCTAAGCTCACG+AGG | - | chr3_3:10197195-10197214 | Msa0441720:intron | 50.0% | |
| !!! | GTTTTGTTTAGCCCCATGGC+CGG | - | chr3_3:10197487-10197506 | Msa0441720:intron | 50.0% |
| ACCAGAAGGTGAACTACGGT+CGG | + | chr3_3:10197684-10197703 | None:intergenic | 50.0% | |
| ACCGTAGTTCACCTTCTGGT+TGG | - | chr3_3:10197684-10197703 | Msa0441720:CDS | 50.0% | |
| CCCAACCAGAAGGTGAACTA+CGG | + | chr3_3:10197688-10197707 | None:intergenic | 50.0% | |
| ! | CCGTAGTTCACCTTCTGGTT+GGG | - | chr3_3:10197685-10197704 | Msa0441720:intron | 50.0% |
| !!! | ATTATTTTGGCACCCCACCC+CGG | + | chr3_3:10198675-10198694 | None:intergenic | 50.0% |
| GTGAGCTTAGCTCAGTTGGT+TGG | + | chr3_3:10198957-10198976 | None:intergenic | 50.0% | |
| ACTCGTGAGCTTAGCTCAGT+TGG | + | chr3_3:10198961-10198980 | None:intergenic | 50.0% | |
| TCACCCTTCCATTGCAACCA+AGG | - | chr3_3:10199251-10199270 | Msa0441720:intron | 50.0% | |
| CACCCTTCCATTGCAACCAA+GGG | - | chr3_3:10199252-10199271 | Msa0441720:intron | 50.0% | |
| GCTCAACCTATACTCAGGGT+CGG | + | chr3_3:10199363-10199382 | None:intergenic | 50.0% | |
| GATTTACCACCCAACTAGCC+TGG | + | chr3_3:10199398-10199417 | None:intergenic | 50.0% | |
| GCGAATAAACCCACTTGGGT+TGG | - | chr3_3:10199495-10199514 | Msa0441720:intron | 50.0% | |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | - | chr3_3:10199509-10199528 | Msa0441720:intron | 50.0% |
| !! | TTGGCCTAGTGGTATTGGCT+TGG | - | chr3_3:10199514-10199533 | Msa0441720:intron | 50.0% |
| !! | TGGCCTAGTGGTATTGGCTT+GGG | - | chr3_3:10199515-10199534 | Msa0441720:intron | 50.0% |
| GTCTCAGGTTCGATTCTCAC+CGG | - | chr3_3:10199563-10199582 | Msa0441720:intron | 50.0% | |
| ! | TCACCGGTGTCAATTTGGGT+TGG | - | chr3_3:10199579-10199598 | Msa0441720:intron | 50.0% |
| AAGACTTGAGGGGCTCTATC+TGG | + | chr3_3:10200200-10200219 | None:intergenic | 50.0% | |
| TGAGCTATCCACCATCCAAC+AGG | + | chr3_3:10200403-10200422 | None:intergenic | 50.0% | |
| CCCCAACAAAAGGCTTAGGT+GGG | + | chr3_3:10200435-10200454 | None:intergenic | 50.0% | |
| ! | CCCACCTAAGCCTTTTGTTG+GGG | - | chr3_3:10200432-10200451 | Msa0441720:intron | 50.0% |
| ! | CCACCTAAGCCTTTTGTTGG+GGG | - | chr3_3:10200433-10200452 | Msa0441720:intron | 50.0% |
| GTGGACTTGCATGCAGTTGA+AGG | - | chr3_3:10200655-10200674 | Msa0441720:intron | 50.0% | |
| ! | GAGCATAGTGGGACAAGAGA+TGG | - | chr3_3:10200694-10200713 | Msa0441720:intron | 50.0% |
| TAGGGGAATGGACGGTTGAA+TGG | - | chr3_3:10201974-10201993 | Msa0441720:intron | 50.0% | |
| CTGAGTGCCCCTATCACCAA+GGG | + | chr3_3:10196247-10196266 | None:intergenic | 55.0% | |
| !! | GGAAACTGGCTTGTTGCCGA+AGG | - | chr3_3:10196373-10196392 | Msa0441720:intron | 55.0% |
| !! | ACTGGCTTGTTGCCGAAGGA+TGG | - | chr3_3:10196377-10196396 | Msa0441720:intron | 55.0% |
| ! | GCTTGTTGCCGAAGGATGGA+TGG | - | chr3_3:10196381-10196400 | Msa0441720:intron | 55.0% |
| AAGGCCCAGGGTTCAAACCT+CGG | - | chr3_3:10196752-10196771 | Msa0441720:CDS | 55.0% | |
| ATGGCCGAGGTTTGAACCCT+GGG | + | chr3_3:10196759-10196778 | None:intergenic | 55.0% | |
| CTGAGCTAAGCTCACGAGGA+CGG | - | chr3_3:10197199-10197218 | Msa0441720:intron | 55.0% | |
| CTTTGCGCTGAAAATGGGGG+AGG | - | chr3_3:10197644-10197663 | Msa0441720:CDS | 55.0% | |
| GGTGGAAAGTCTGAGCCTCT+TGG | + | chr3_3:10198342-10198361 | None:intergenic | 55.0% | |
| ! | ACTCGTGTGGGTGTCACCAA+TGG | - | chr3_3:10198484-10198503 | Msa0441720:intron | 55.0% |
| !!! | TTATTTTGGCACCCCACCCC+GGG | + | chr3_3:10198674-10198693 | None:intergenic | 55.0% |
| ! | AGGAAATCTGGCGGATGCCA+TGG | - | chr3_3:10199314-10199333 | Msa0441720:intron | 55.0% |
| ACTCAGGGTCGGATCTCCTT+GGG | + | chr3_3:10199352-10199371 | None:intergenic | 55.0% | |
| TACTCAGGGTCGGATCTCCT+TGG | + | chr3_3:10199353-10199372 | None:intergenic | 55.0% | |
| GGAGATCCGACCCTGAGTAT+AGG | - | chr3_3:10199354-10199373 | Msa0441720:intron | 55.0% | |
| CCGGGCTCAACCTATACTCA+GGG | + | chr3_3:10199367-10199386 | None:intergenic | 55.0% | |
| ! | CCCTGAGTATAGGTTGAGCC+CGG | - | chr3_3:10199364-10199383 | Msa0441720:intron | 55.0% |
| ! | CCTGAGTATAGGTTGAGCCC+GGG | - | chr3_3:10199365-10199384 | Msa0441720:intron | 55.0% |
| TTGGGTGGTAAATCCGTCCC+TGG | - | chr3_3:10199404-10199423 | Msa0441720:intron | 55.0% | |
| ACCACTAGGCCAACCCAAGT+GGG | + | chr3_3:10199507-10199526 | None:intergenic | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | + | chr3_3:10199508-10199527 | None:intergenic | 55.0% | |
| GGTCCCAAGCCAATACCACT+AGG | + | chr3_3:10199521-10199540 | None:intergenic | 55.0% | |
| !! | AGTGGTATTGGCTTGGGACC+TGG | - | chr3_3:10199521-10199540 | Msa0441720:intron | 55.0% |
| !! | GTGGTATTGGCTTGGGACCT+GGG | - | chr3_3:10199522-10199541 | Msa0441720:intron | 55.0% |
| GAATCGAACCTGAGACCTCG+AGG | + | chr3_3:10199559-10199578 | None:intergenic | 55.0% | |
| CCCCCAACAAAAGGCTTAGG+TGG | + | chr3_3:10200436-10200455 | None:intergenic | 55.0% | |
| GCTCCCCCAACAAAAGGCTT+AGG | + | chr3_3:10200439-10200458 | None:intergenic | 55.0% | |
| ! | GCCTTTTGTTGGGGGAGCTT+TGG | - | chr3_3:10200441-10200460 | Msa0441720:intron | 55.0% |
| GCCAAAGCTCCCCCAACAAA+AGG | + | chr3_3:10200445-10200464 | None:intergenic | 55.0% | |
| CCTGAGTGCCCCTATCACCA+AGG | + | chr3_3:10196248-10196267 | None:intergenic | 60.0% | |
| !! | CCTTGGTGATAGGGGCACTC+AGG | - | chr3_3:10196245-10196264 | Msa0441720:intron | 60.0% |
| GATGGCCGAGGTTTGAACCC+TGG | + | chr3_3:10196760-10196779 | None:intergenic | 60.0% | |
| AGCTAAGCTCACGAGGACGG+TGG | - | chr3_3:10197202-10197221 | Msa0441720:intron | 60.0% | |
| GCCGACCGTAGTTCACCTTC+TGG | - | chr3_3:10197680-10197699 | Msa0441720:CDS | 60.0% | |
| ! | CGTGTGGGTGTCACCAATGG+CGG | - | chr3_3:10198487-10198506 | Msa0441720:intron | 60.0% |
| !!! | TATTTTGGCACCCCACCCCG+GGG | + | chr3_3:10198841-10198860 | None:intergenic | 60.0% |
| TACCTCCGGGGTTCAAACCC+CGG | + | chr3_3:10198884-10198903 | None:intergenic | 60.0% | |
| GGTTTGAACCCCGGAGGTAG+TGG | - | chr3_3:10198885-10198904 | Msa0441720:intron | 60.0% | |
| AAGGTCCGGGGTTCAAACCC+CGG | + | chr3_3:10198911-10198930 | None:intergenic | 60.0% | |
| GGATCTCCTTGGGGACCCAT+GGG | + | chr3_3:10199342-10199361 | None:intergenic | 60.0% | |
| CTCAGGGTCGGATCTCCTTG+GGG | + | chr3_3:10199351-10199370 | None:intergenic | 60.0% | |
| CCCGGGCTCAACCTATACTC+AGG | + | chr3_3:10199368-10199387 | None:intergenic | 60.0% | |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | - | chr3_3:10199503-10199522 | Msa0441720:intron | 60.0% |
| TCGAACCTGAGACCTCGAGG+AGG | + | chr3_3:10199556-10199575 | None:intergenic | 60.0% | |
| GACAGAGCCGGGGATCTTAG+TGG | - | chr3_3:10201501-10201520 | Msa0441720:intron | 60.0% | |
| CCAAAATCAGGGGCGGAGCC+AGG | + | chr3_3:10196085-10196104 | None:intergenic | 65.0% | |
| ! | CCTGGCTCCGCCCCTGATTT+TGG | - | chr3_3:10196082-10196101 | Msa0441720:intron | 65.0% |
| AGTGGCCGGGGTTTGAACCC+CGG | - | chr3_3:10198821-10198840 | Msa0441720:intron | 65.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | - | chr3_3:10198821-10198840 | Msa0441720:intron | 65.0% | |
| ! | TGAACCCCGGAGGTAGTGGC+CGG | - | chr3_3:10198889-10198908 | Msa0441720:intron | 65.0% |
| AAACCCCGGCCACTACCTCC+GGG | + | chr3_3:10198897-10198916 | None:intergenic | 65.0% | |
| CAAACCCCGGCCACTACCTC+CGG | + | chr3_3:10198898-10198917 | None:intergenic | 65.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | - | chr3_3:10198821-10198840 | Msa0441720:intron | 65.0% | |
| GCGGATGCCATGGCTCCCAT+GGG | - | chr3_3:10199324-10199343 | Msa0441720:intron | 65.0% | |
| TTGGGGACCCATGGGAGCCA+TGG | + | chr3_3:10199334-10199353 | None:intergenic | 65.0% | |
| ATGGCTCCCATGGGTCCCCA+AGG | - | chr3_3:10199333-10199352 | Msa0441720:intron | 65.0% | |
| CGGATCTCCTTGGGGACCCA+TGG | + | chr3_3:10199343-10199362 | None:intergenic | 65.0% | |
| ! | AACTAGCCTGGGCACACGCC+CGG | + | chr3_3:10199386-10199405 | None:intergenic | 65.0% |
| ! | GGCGTGTGCCCAGGCTAGTT+GGG | - | chr3_3:10199386-10199405 | Msa0441720:intron | 65.0% |
| ! | GTGTGCCCAGGCTAGTTGGG+TGG | - | chr3_3:10199389-10199408 | Msa0441720:intron | 65.0% |
| ! | TCGAGGAGGAGCACACTCCC+AGG | + | chr3_3:10199542-10199561 | None:intergenic | 65.0% |
| ! | TGGGAGTGTGCTCCTCCTCG+AGG | - | chr3_3:10199541-10199560 | Msa0441720:intron | 65.0% |
| GTGCTCCTCCTCGAGGTCTC+AGG | - | chr3_3:10199548-10199567 | Msa0441720:intron | 65.0% | |
| GTGGCCGGGGTTTGAACCCC+GGG | - | chr3_3:10198822-10198841 | Msa0441720:intron | 70.0% | |
| TGGCCGGGGTTTGAACCCCG+GGG | - | chr3_3:10198823-10198842 | Msa0441720:intron | 70.0% | |
| CCACCCCGGGGTTCAAACCC+CGG | + | chr3_3:10198829-10198848 | None:intergenic | 70.0% | |
| CGGGGTTTGAACCCCGGGGT+GGG | - | chr3_3:10198827-10198846 | Msa0441720:intron | 70.0% | |
| GGGGTTTGAACCCCGGGGTG+GGG | - | chr3_3:10198828-10198847 | Msa0441720:intron | 70.0% | |
| ! | GAACCCCGGAGGTAGTGGCC+GGG | - | chr3_3:10198890-10198909 | Msa0441720:intron | 70.0% |
| ! | AACCCCGGAGGTAGTGGCCG+GGG | - | chr3_3:10198891-10198910 | Msa0441720:intron | 70.0% |
| AACCCCGGCCACTACCTCCG+GGG | + | chr3_3:10198896-10198915 | None:intergenic | 70.0% | |
| GGCGGATGCCATGGCTCCCA+TGG | - | chr3_3:10199323-10199342 | Msa0441720:intron | 70.0% | |
| ! | ACTAGCCTGGGCACACGCCC+GGG | + | chr3_3:10199385-10199404 | None:intergenic | 70.0% |
| GGGCGTGTGCCCAGGCTAGT+TGG | - | chr3_3:10199385-10199404 | Msa0441720:intron | 70.0% | |
| CCGGGGTTTGAACCCCGGGG+TGG | - | chr3_3:10198826-10198845 | Msa0441720:intron | 75.0% | |
| GGCCGGGGTTTGAACCCCGG+AGG | - | chr3_3:10198824-10198843 | Msa0441720:intron | 75.0% | |
| TTGAGCCCGGGCGTGTGCCC+AGG | - | chr3_3:10199377-10199396 | Msa0441720:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 10195870 | 10202158 | 10195870 | ID=Msa0441720;Name=Msa0441720 |
| chr3_3 | mRNA | 10195870 | 10202158 | 10195870 | ID=Msa0441720-mRNA-1;Parent=Msa0441720;Name=Msa0441720-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.22|0.1|1|0.77|0.6|10|0|536 |
| chr3_3 | exon | 10202027 | 10202158 | 10202027 | ID=Msa0441720-mRNA-1:exon:2225;Parent=Msa0441720-mRNA-1 |
| chr3_3 | exon | 10201584 | 10201808 | 10201584 | ID=Msa0441720-mRNA-1:exon:2224;Parent=Msa0441720-mRNA-1 |
| chr3_3 | exon | 10200310 | 10200429 | 10200310 | ID=Msa0441720-mRNA-1:exon:2223;Parent=Msa0441720-mRNA-1 |
| chr3_3 | exon | 10200025 | 10200222 | 10200025 | ID=Msa0441720-mRNA-1:exon:2222;Parent=Msa0441720-mRNA-1 |
| chr3_3 | exon | 10197805 | 10197960 | 10197805 | ID=Msa0441720-mRNA-1:exon:2221;Parent=Msa0441720-mRNA-1 |
| chr3_3 | exon | 10197534 | 10197703 | 10197534 | ID=Msa0441720-mRNA-1:exon:2220;Parent=Msa0441720-mRNA-1 |
| chr3_3 | exon | 10197246 | 10197395 | 10197246 | ID=Msa0441720-mRNA-1:exon:2219;Parent=Msa0441720-mRNA-1 |
| chr3_3 | exon | 10196586 | 10196813 | 10196586 | ID=Msa0441720-mRNA-1:exon:2218;Parent=Msa0441720-mRNA-1 |
| chr3_3 | exon | 10196473 | 10196522 | 10196473 | ID=Msa0441720-mRNA-1:exon:2217;Parent=Msa0441720-mRNA-1 |
| chr3_3 | exon | 10195870 | 10196051 | 10195870 | ID=Msa0441720-mRNA-1:exon:2216;Parent=Msa0441720-mRNA-1 |
| chr3_3 | CDS | 10202027 | 10202158 | 10202027 | ID=Msa0441720-mRNA-1:cds;Parent=Msa0441720-mRNA-1 |
| chr3_3 | CDS | 10201584 | 10201808 | 10201584 | ID=Msa0441720-mRNA-1:cds;Parent=Msa0441720-mRNA-1 |
| chr3_3 | CDS | 10200310 | 10200429 | 10200310 | ID=Msa0441720-mRNA-1:cds;Parent=Msa0441720-mRNA-1 |
| chr3_3 | CDS | 10200025 | 10200222 | 10200025 | ID=Msa0441720-mRNA-1:cds;Parent=Msa0441720-mRNA-1 |
| chr3_3 | CDS | 10197805 | 10197960 | 10197805 | ID=Msa0441720-mRNA-1:cds;Parent=Msa0441720-mRNA-1 |
| chr3_3 | CDS | 10197534 | 10197703 | 10197534 | ID=Msa0441720-mRNA-1:cds;Parent=Msa0441720-mRNA-1 |
| chr3_3 | CDS | 10197246 | 10197395 | 10197246 | ID=Msa0441720-mRNA-1:cds;Parent=Msa0441720-mRNA-1 |
| chr3_3 | CDS | 10196586 | 10196813 | 10196586 | ID=Msa0441720-mRNA-1:cds;Parent=Msa0441720-mRNA-1 |
| chr3_3 | CDS | 10196473 | 10196522 | 10196473 | ID=Msa0441720-mRNA-1:cds;Parent=Msa0441720-mRNA-1 |
| chr3_3 | CDS | 10195870 | 10196051 | 10195870 | ID=Msa0441720-mRNA-1:cds;Parent=Msa0441720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
