Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441940 | XP_013458840.1 | 98.811 | 757 | 9 | 0 | 1 | 757 | 1 | 757 | 0.0 | 1532 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441940 | sp|Q8RXR2|CLCF_ARATH | 70.187 | 748 | 184 | 10 | 39 | 757 | 44 | 781 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441940 | A0A072UTF6 | 98.811 | 757 | 9 | 0 | 1 | 757 | 1 | 757 | 0.0 | 1532 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0441940 | Msa0489590 | 0.838385 | 2.967610e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441940 | MtrunA17_Chr3g0079741 | 98.551 | 759 | 9 | 1 | 1 | 757 | 1 | 759 | 0.0 | 1527 |
| Msa0441940 | MtrunA17_Chr5g0448751 | 38.388 | 732 | 380 | 15 | 35 | 730 | 2 | 698 | 9.76e-122 | 381 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0441940 | AT1G55620.2 | 70.187 | 748 | 184 | 10 | 39 | 757 | 44 | 781 | 0.0 | 993 |
| Msa0441940 | AT1G55620.1 | 73.019 | 593 | 142 | 4 | 175 | 757 | 1 | 585 | 0.0 | 837 |
| Msa0441940 | AT4G35440.1 | 40.895 | 626 | 329 | 12 | 101 | 707 | 68 | 671 | 5.82e-135 | 416 |
| Msa0441940 | AT4G35440.2 | 40.895 | 626 | 329 | 12 | 101 | 707 | 68 | 671 | 1.95e-134 | 416 |
Find 224 sgRNAs with CRISPR-Local
Find 538 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATTCGTTTGCATAATTT+AGG | 0.121116 | 3_3:-10513558 | Msa0441940:three_prime_UTR |
| GGGCTGTTGGGCTGGCCATT+TGG | 0.134286 | 3_3:-10515508 | Msa0441940:CDS |
| GGCTGTTGGGCTGGCCATTT+GGG | 0.170279 | 3_3:-10515507 | Msa0441940:CDS |
| CTTCATTCATTTGATTCTTC+TGG | 0.175525 | 3_3:-10521121 | Msa0441940:CDS |
| ATAATATTCCAGGATATTTA+AGG | 0.176331 | 3_3:+10516428 | None:intergenic |
| AATCGATGAAGAACTATTTC+TGG | 0.200927 | 3_3:-10515336 | Msa0441940:CDS |
| ACAGCTCTTTGCAAGGGCTC+TGG | 0.217875 | 3_3:-10516301 | Msa0441940:CDS |
| CTGGCTTCGTTTGCAGAGAT+TGG | 0.220386 | 3_3:-10519234 | Msa0441940:CDS |
| TTGTTATCCGAATACTAATT+TGG | 0.225513 | 3_3:-10514405 | Msa0441940:CDS |
| GACTATATCCAGGAGAAATT+TGG | 0.229814 | 3_3:-10516505 | Msa0441940:CDS |
| AACTGTATCAAATGTCTTAC+AGG | 0.230240 | 3_3:-10517450 | Msa0441940:CDS |
| TGGTCTTGCCACTGGTCTTC+TGG | 0.237698 | 3_3:-10521038 | Msa0441940:CDS |
| AAGAAGCATAGTGCAATTTC+TGG | 0.257145 | 3_3:+10513456 | None:intergenic |
| GAGTAGTATTCTGCTTCTTA+TGG | 0.264903 | 3_3:+10513511 | None:intergenic |
| CTACCTTTATACCTGATATT+AGG | 0.275635 | 3_3:-10516592 | Msa0441940:CDS |
| ATTCAAGCTGCAGTTACTTT+AGG | 0.280234 | 3_3:-10519047 | Msa0441940:CDS |
| TACAACTGCCATGATTATAT+TGG | 0.284492 | 3_3:-10517489 | Msa0441940:CDS |
| AATATCCTGGAATATTATAC+TGG | 0.291535 | 3_3:-10516423 | Msa0441940:CDS |
| GGCGGTGGTGGTGGCGGTAG+TGG | 0.299309 | 3_3:-10521289 | Msa0441940:CDS |
| TGCAAGGGCTCTGGGCTTGT+AGG | 0.300501 | 3_3:-10516292 | Msa0441940:CDS |
| TTTAGGTACTGGCTGTTCAT+TGG | 0.303630 | 3_3:-10519030 | Msa0441940:CDS |
| CTGGTTGCTGCTTTCAATAA+AGG | 0.306131 | 3_3:-10521019 | Msa0441940:CDS |
| TTGCTCCTTGGTTGTCTCCT+TGG | 0.310407 | 3_3:-10521058 | Msa0441940:CDS |
| AACGATCAACTCCGTCTTCT+AGG | 0.310860 | 3_3:-10521376 | Msa0441940:CDS |
| ACCATGACTCCTCCGGTTAC+AGG | 0.314186 | 3_3:+10519182 | None:intergenic |
| GAACACATCGCCGGAGTTAA+TGG | 0.314664 | 3_3:-10521310 | Msa0441940:CDS |
| ATATTCGTTTGCATAATTTA+GGG | 0.316154 | 3_3:-10513557 | Msa0441940:three_prime_UTR |
| CAGCTCTTTGCAAGGGCTCT+GGG | 0.316199 | 3_3:-10516300 | Msa0441940:CDS |
| GTGCTTCTGCTCCTGGAATA+TGG | 0.331356 | 3_3:-10516360 | Msa0441940:CDS |
| ACTATTTCTGGACAAACTTA+AGG | 0.331504 | 3_3:-10515324 | Msa0441940:intron |
| CAATGACTCGTTTGGTTGCT+TGG | 0.331580 | 3_3:-10516543 | Msa0441940:CDS |
| ATAATCATGGCAGTTGTAAA+TGG | 0.332811 | 3_3:+10517494 | None:intergenic |
| TCCACCTGGTAAAAGAAATT+TGG | 0.333930 | 3_3:-10515450 | Msa0441940:CDS |
| TGGTTGCTGCTTTCAATAAA+GGG | 0.343376 | 3_3:-10521018 | Msa0441940:CDS |
| GGTTTAGAACTCTGCATTGT+TGG | 0.350768 | 3_3:-10515380 | Msa0441940:CDS |
| GGCTTCAATGCAGCAGTTGC+AGG | 0.351636 | 3_3:-10517572 | Msa0441940:CDS |
| GTGTGGTTTACTAGAAATAT+TGG | 0.355175 | 3_3:-10519150 | Msa0441940:CDS |
| GCTGCAGTTGGTGCTGTGTT+TGG | 0.356598 | 3_3:-10516238 | Msa0441940:CDS |
| TTCCTCTTGTCAGGTTTCTC+AGG | 0.357791 | 3_3:-10514948 | Msa0441940:intron |
| TTAGGTACTGGCTGTTCATT+GGG | 0.358475 | 3_3:-10519029 | Msa0441940:CDS |
| GCAGCAGCTGGAATTTCTTC+AGG | 0.362055 | 3_3:-10518903 | Msa0441940:intron |
| GGCGGTAGTGGGAGTGGTAA+AGG | 0.362636 | 3_3:-10521277 | Msa0441940:CDS |
| ATACAATGGGAAATAGAAAC+AGG | 0.366145 | 3_3:-10513487 | Msa0441940:three_prime_UTR |
| TGCCCTGCCATAGGTGGTTT+AGG | 0.367716 | 3_3:-10516466 | Msa0441940:CDS |
| ATTCCTAATATCAGGTATAA+AGG | 0.376141 | 3_3:+10516589 | None:intergenic |
| AATTTAAGCGATTCCATTGA+TGG | 0.377246 | 3_3:-10521441 | Msa0441940:five_prime_UTR |
| GCCATAGGTGGTTTAGGAGC+TGG | 0.378901 | 3_3:-10516460 | Msa0441940:CDS |
| AGAGATATGTTGAAATTATC+AGG | 0.385849 | 3_3:-10521250 | Msa0441940:CDS |
| AGGAGCAACAAAGCCCATTC+AGG | 0.387645 | 3_3:+10521073 | None:intergenic |
| GGTTCCCTCAGTGACAAATC+AGG | 0.389342 | 3_3:-10515486 | Msa0441940:CDS |
| ACAGAAAACAATTTGACAAA+TGG | 0.391756 | 3_3:-10513794 | Msa0441940:CDS |
| TAAGAGCGACTCAGATCCTT+TGG | 0.394845 | 3_3:-10514747 | Msa0441940:CDS |
| GAATGGGCTTTGTTGCTCCT+TGG | 0.397932 | 3_3:-10521070 | Msa0441940:CDS |
| GGCTTACCAGAGCATAAGCC+TGG | 0.405869 | 3_3:+10516155 | None:intergenic |
| GGAAAGAGTGCTTCTGCTCC+TGG | 0.406413 | 3_3:-10516367 | Msa0441940:CDS |
| AAGTCAAAACCTTGTCTTTG+AGG | 0.411275 | 3_3:+10519101 | None:intergenic |
| TGACATATGGTGACATTAGA+AGG | 0.411341 | 3_3:-10514799 | Msa0441940:CDS |
| CGGGCACTGTAAAAGCTGAT+TGG | 0.411686 | 3_3:+10517423 | None:intergenic |
| ACAAGAGTGGTTATTTGATA+AGG | 0.412286 | 3_3:-10513647 | Msa0441940:three_prime_UTR |
| TGTCTCCTTGGTCTTGCCAC+TGG | 0.413211 | 3_3:-10521046 | Msa0441940:CDS |
| AATTTGATGAATTTAACAAC+TGG | 0.413985 | 3_3:-10521471 | Msa0441940:five_prime_UTR |
| CTTCCACCGCGTTTAACTAC+TGG | 0.414609 | 3_3:+10514338 | None:intergenic |
| AATTAGAATTTGAAAGTCAA+TGG | 0.415202 | 3_3:+10521562 | None:intergenic |
| ATGTCAACACTAGGACCTTC+AGG | 0.420080 | 3_3:+10519005 | None:intergenic |
| AGAAGTCTCATTAGACTTCT+CGG | 0.421457 | 3_3:+10514769 | None:intergenic |
| TCATTGATTCTTAACGTGTT+GGG | 0.421711 | 3_3:+10513599 | None:intergenic |
| GATTCTTAACGTGTTGGGAT+TGG | 0.421937 | 3_3:+10513604 | None:intergenic |
| TGTGCAACAGCAGCATTTCC+AGG | 0.423733 | 3_3:+10516181 | None:intergenic |
| GTTGCAGCTGGTGCAGCAGC+TGG | 0.424808 | 3_3:-10518915 | Msa0441940:CDS |
| AATATACAAGAAGTGATATA+TGG | 0.425734 | 3_3:+10513678 | None:intergenic |
| GCGGTGGTGGTGGCGGTAGT+GGG | 0.426567 | 3_3:-10521288 | Msa0441940:CDS |
| TCCTTCATTATGACGAACTA+TGG | 0.426948 | 3_3:-10514280 | Msa0441940:CDS |
| ATCATTGATTCTTAACGTGT+TGG | 0.428471 | 3_3:+10513598 | None:intergenic |
| ATCATTGCCCTTAAATATCC+TGG | 0.429383 | 3_3:-10516436 | Msa0441940:CDS |
| ACGAACTATGGCACTGTCTC+AGG | 0.429918 | 3_3:-10514268 | Msa0441940:intron |
| CACACAGCATTCCTAATATC+AGG | 0.431743 | 3_3:+10516581 | None:intergenic |
| CTGATAGTGCACCTCCTGAA+TGG | 0.436429 | 3_3:-10521087 | Msa0441940:CDS |
| GGCCACGGCTAGAGAGTTGA+TGG | 0.437465 | 3_3:-10514384 | Msa0441940:CDS |
| TCAAATAATGAAGATGATGA+TGG | 0.439967 | 3_3:-10515407 | Msa0441940:CDS |
| CTTGATGGGATATTGACATA+TGG | 0.439987 | 3_3:-10514812 | Msa0441940:CDS |
| GGAGTTAATGGCGGTGGTGG+TGG | 0.440137 | 3_3:-10521298 | Msa0441940:CDS |
| TGAGTTAGAAGCCATATTCC+AGG | 0.441628 | 3_3:+10516349 | None:intergenic |
| AGCCAGGCAGCACCCTCATT+CGG | 0.445698 | 3_3:+10519251 | None:intergenic |
| GCAGTTGGTGCTGTGTTTGG+AGG | 0.445882 | 3_3:-10516235 | Msa0441940:CDS |
| GTTATCAATTCAGCAATTCC+TGG | 0.446728 | 3_3:-10516199 | Msa0441940:CDS |
| AAACCCCAGTATAATATTCC+AGG | 0.447643 | 3_3:+10516418 | None:intergenic |
| AGTCAAAACCTTGTCTTTGA+GGG | 0.448717 | 3_3:+10519102 | None:intergenic |
| GGTGGTGGCGGTAGTGGGAG+TGG | 0.449866 | 3_3:-10521283 | Msa0441940:CDS |
| GCCGTGGCCAAATTAGTATT+CGG | 0.450163 | 3_3:+10514398 | None:intergenic |
| CCATAGGTGGTTTAGGAGCT+GGG | 0.452875 | 3_3:-10516459 | Msa0441940:CDS |
| TAATATTCCAGGATATTTAA+GGG | 0.456614 | 3_3:+10516429 | None:intergenic |
| CTAGAGAGTTGATGGAGGCC+AGG | 0.458606 | 3_3:-10514376 | Msa0441940:CDS |
| GTTAATGGCGGTGGTGGTGG+CGG | 0.462911 | 3_3:-10521295 | Msa0441940:CDS |
| ATGAAAATATAGTGTCTGTT+GGG | 0.463303 | 3_3:+10521600 | None:intergenic |
| GTGGAAGAAATTCTACGTAC+TGG | 0.465680 | 3_3:-10516388 | Msa0441940:CDS |
| TCTTTGAGAGTTACAGATGA+TGG | 0.466147 | 3_3:+10514899 | None:intergenic |
| GAACTCTGCATTGTTGGAGA+TGG | 0.470679 | 3_3:-10515374 | Msa0441940:CDS |
| TGCTGCTGTTGCACAACCCC+AGG | 0.472828 | 3_3:-10516173 | Msa0441940:CDS |
| AGGTGCATGTAATACATGAA+TGG | 0.473264 | 3_3:-10519289 | Msa0441940:CDS |
| CCCAGCTCCTAAACCACCTA+TGG | 0.473469 | 3_3:+10516459 | None:intergenic |
| AACGTGTTGGGATTGGAACT+TGG | 0.473675 | 3_3:+10513611 | None:intergenic |
| CTCCGAATGAGGGTGCTGCC+TGG | 0.475061 | 3_3:-10519253 | Msa0441940:CDS |
| GCGGTAGTGGGAGTGGTAAA+GGG | 0.475130 | 3_3:-10521276 | Msa0441940:CDS |
| TTCATCGATTTCTTCAAGCT+CGG | 0.478662 | 3_3:+10515349 | None:intergenic |
| CAGAAAACAATTTGACAAAT+GGG | 0.478761 | 3_3:-10513793 | Msa0441940:CDS |
| ATGTAATACATGAATGGGTA+TGG | 0.481494 | 3_3:-10519283 | Msa0441940:CDS |
| AGAAGCATAGTGCAATTTCT+GGG | 0.482200 | 3_3:+10513457 | None:intergenic |
| TGGCTTCGTTTGCAGAGATT+GGG | 0.483027 | 3_3:-10519233 | Msa0441940:CDS |
| TGATAGTGCACCTCCTGAAT+GGG | 0.483817 | 3_3:-10521086 | Msa0441940:CDS |
| GGCTGTTCATTGGGTCCTGA+AGG | 0.484109 | 3_3:-10519020 | Msa0441940:CDS |
| TGCAGAGATTGGGTGATACA+TGG | 0.484884 | 3_3:-10519223 | Msa0441940:CDS |
| AATGAAAATATAGTGTCTGT+TGG | 0.485584 | 3_3:+10521599 | None:intergenic |
| ATCGGAAAGTCGTGCGCCAA+TGG | 0.485806 | 3_3:-10518984 | Msa0441940:CDS |
| AGCAGATTTCAACTCGTACT+CGG | 0.486135 | 3_3:+10517403 | None:intergenic |
| GAGAGGAAGCGAAGAATTGT+CGG | 0.486398 | 3_3:-10514305 | Msa0441940:CDS |
| GGTGCATGTAATACATGAAT+GGG | 0.486735 | 3_3:-10519288 | Msa0441940:CDS |
| ATTAACTCTTGATTCAAGCT+TGG | 0.488193 | 3_3:-10513769 | Msa0441940:exon |
| TACGCACCGAGTTTAATGAT+TGG | 0.489864 | 3_3:-10516262 | Msa0441940:CDS |
| TAGAATACTGCTTCCTCTCA+TGG | 0.492339 | 3_3:-10515742 | Msa0441940:intron |
| AAGCGTGGCAATGACTCGTT+TGG | 0.492664 | 3_3:-10516551 | Msa0441940:CDS |
| CATCATTAATGAGAATCCAT+TGG | 0.492781 | 3_3:+10518968 | None:intergenic |
| AAATTATGCAAACGAATATG+AGG | 0.492841 | 3_3:+10513561 | None:intergenic |
| TTCCCCTGATTTGTCACTGA+GGG | 0.495318 | 3_3:+10515482 | None:intergenic |
| GCCGGAGTTAATGGCGGTGG+TGG | 0.496160 | 3_3:-10521301 | Msa0441940:CDS |
| GGGCACTGTAAAAGCTGATT+GGG | 0.497926 | 3_3:+10517424 | None:intergenic |
| ACTGTAGTCTGCCCTGCCAT+AGG | 0.499166 | 3_3:-10516475 | Msa0441940:CDS |
| GCTGCAGTTACTTTAGGTAC+TGG | 0.500181 | 3_3:-10519041 | Msa0441940:CDS |
| ATGGGCTGGTACTCCGAATG+AGG | 0.500266 | 3_3:-10519264 | Msa0441940:CDS |
| GCTTGAATAGCCTTTACCGT+TGG | 0.500425 | 3_3:+10519062 | None:intergenic |
| AGAATACTACTCAATACAAT+GGG | 0.501975 | 3_3:-10513500 | Msa0441940:three_prime_UTR |
| CAATCTCTGCAAACGAAGCC+AGG | 0.502178 | 3_3:+10519235 | None:intergenic |
| TGGTAATTGCTTAACGCCCC+TGG | 0.508454 | 3_3:+10514358 | None:intergenic |
| GTTTCCTCTGTTTGTACTCG+AGG | 0.510022 | 3_3:-10514464 | Msa0441940:CDS |
| CAATGGATTCTCATTAATGA+TGG | 0.511491 | 3_3:-10518967 | Msa0441940:CDS |
| GCTCCTAAACCACCTATGGC+AGG | 0.513781 | 3_3:+10516463 | None:intergenic |
| CTCCGGTTACAGGTATCAAA+AGG | 0.516383 | 3_3:+10519192 | None:intergenic |
| AACTGAAGCCAATATAATCA+TGG | 0.517487 | 3_3:+10517481 | None:intergenic |
| AATATTGGATCAAATAAAGC+AGG | 0.518607 | 3_3:-10519135 | Msa0441940:CDS |
| TATTGCCACAGCTCTTTGCA+AGG | 0.519958 | 3_3:-10516308 | Msa0441940:CDS |
| AAAATAGCACTTGTTGCAGC+TGG | 0.520530 | 3_3:-10518927 | Msa0441940:CDS |
| ACCTGTAACCGGAGGAGTCA+TGG | 0.521632 | 3_3:-10519183 | Msa0441940:CDS |
| ACCACCACCGCCATTAACTC+CGG | 0.524738 | 3_3:+10521300 | None:intergenic |
| ATATCCTGGAATATTATACT+GGG | 0.526329 | 3_3:-10516422 | Msa0441940:CDS |
| TGGCTTCTAACTCAATTAGC+AGG | 0.529356 | 3_3:-10516340 | Msa0441940:CDS |
| AACTCAATTAGCAGGTGCTA+AGG | 0.529397 | 3_3:-10516332 | Msa0441940:CDS |
| GCAGATTTCAACTCGTACTC+GGG | 0.532249 | 3_3:+10517404 | None:intergenic |
| TAGAGAGTTGATGGAGGCCA+GGG | 0.533353 | 3_3:-10514375 | Msa0441940:CDS |
| TTTGATAATCTAACTTTCTG+TGG | 0.537945 | 3_3:+10513822 | None:intergenic |
| ATTTAAGCGATTCCATTGAT+GGG | 0.538797 | 3_3:-10521440 | Msa0441940:five_prime_UTR |
| TAGGAAGGCCAAATTTCTCC+TGG | 0.539754 | 3_3:+10516497 | None:intergenic |
| AGGAATCTATCCAACGGTAA+AGG | 0.540393 | 3_3:-10519072 | Msa0441940:CDS |
| GCCATAGTTCGTCATAATGA+AGG | 0.541299 | 3_3:+10514279 | None:intergenic |
| TTAACTTGTGCAGGTTGGAA+TGG | 0.542954 | 3_3:-10515838 | Msa0441940:intron |
| TGTCACTGAGGGAACCCAAA+TGG | 0.544172 | 3_3:+10515493 | None:intergenic |
| CACGGATCGGAACACATCGC+CGG | 0.548171 | 3_3:-10521319 | Msa0441940:CDS |
| TTAATGATTGGTGCTGCAGT+TGG | 0.548394 | 3_3:-10516250 | Msa0441940:CDS |
| CAGAATACTACTCAATACAA+TGG | 0.548634 | 3_3:-10513501 | Msa0441940:three_prime_UTR |
| CAAATAATGAAGATGATGAT+GGG | 0.550654 | 3_3:-10515406 | Msa0441940:CDS |
| GGTTGCTGCTTTCAATAAAG+GGG | 0.552620 | 3_3:-10521017 | Msa0441940:intron |
| ATTTGATGAATTTAACAACT+GGG | 0.555779 | 3_3:-10521470 | Msa0441940:five_prime_UTR |
| ATTGCCACAGCTCTTTGCAA+GGG | 0.555909 | 3_3:-10516307 | Msa0441940:CDS |
| AAGGGCTCTGGGCTTGTAGG+TGG | 0.557216 | 3_3:-10516289 | Msa0441940:CDS |
| ACAACCCCAGGCTTATGCTC+TGG | 0.559697 | 3_3:-10516161 | Msa0441940:intron |
| ATCGCCGGAGTTAATGGCGG+TGG | 0.561251 | 3_3:-10521304 | Msa0441940:CDS |
| TCCGAATACTAATTTGGCCA+CGG | 0.561548 | 3_3:-10514399 | Msa0441940:CDS |
| CATGCCAACCATGACTCCTC+CGG | 0.562534 | 3_3:+10519175 | None:intergenic |
| GTAGTCTGCCCTGCCATAGG+TGG | 0.563738 | 3_3:-10516472 | Msa0441940:CDS |
| TACGAGTTGAAATCTGCTGC+TGG | 0.570488 | 3_3:-10517398 | Msa0441940:intron |
| CTCCATCAACTCTCTAGCCG+TGG | 0.573432 | 3_3:+10514382 | None:intergenic |
| GTTCCCTCAGTGACAAATCA+GGG | 0.580531 | 3_3:-10515485 | Msa0441940:CDS |
| CTCAGTGACAAATCAGGGGA+AGG | 0.581546 | 3_3:-10515480 | Msa0441940:CDS |
| GCTTACCAGAGCATAAGCCT+GGG | 0.582753 | 3_3:+10516156 | None:intergenic |
| GTCAAAACCTTGTCTTTGAG+GGG | 0.583643 | 3_3:+10519103 | None:intergenic |
| GAAGACCAGTGGCAAGACCA+AGG | 0.592996 | 3_3:+10521041 | None:intergenic |
| TTATCAAATAACCACTCTTG+TGG | 0.594290 | 3_3:+10513649 | None:intergenic |
| GTCATGGTTGGCATGATGTG+TGG | 0.594764 | 3_3:-10519167 | Msa0441940:CDS |
| AGAGCCCTTGCAAAGAGCTG+TGG | 0.596197 | 3_3:+10516303 | None:intergenic |
| AGTTATTCCCCTCAAAGACA+AGG | 0.598527 | 3_3:-10519110 | Msa0441940:CDS |
| ATACTGGGGTTTCACAAATG+TGG | 0.606217 | 3_3:-10516407 | Msa0441940:CDS |
| TGGGCTGGTACTCCGAATGA+GGG | 0.609332 | 3_3:-10519263 | Msa0441940:CDS |
| GGAGAATTCTCTGCACGAAG+AGG | 0.611903 | 3_3:+10517518 | None:intergenic |
| CTCCTAAACCACCTATGGCA+GGG | 0.612594 | 3_3:+10516464 | None:intergenic |
| AGAAGTAGAACTGAAGTCAA+AGG | 0.614115 | 3_3:+10515786 | None:intergenic |
| GAACGAGACATTGAAGCTCA+CGG | 0.614125 | 3_3:-10521337 | Msa0441940:CDS |
| TCGCTATTGAAACTGTGCTG+AGG | 0.616198 | 3_3:-10517541 | Msa0441940:CDS |
| AATGAAGATGATGATGGGAA+TGG | 0.618213 | 3_3:-10515401 | Msa0441940:CDS |
| CATTTACTACATACATCCAA+AGG | 0.622009 | 3_3:+10514731 | None:intergenic |
| ATGGCAGGGCAGACTACAGT+AGG | 0.622344 | 3_3:+10516478 | None:intergenic |
| CATGTCGAAATACTATCTGA+AGG | 0.623321 | 3_3:-10514924 | Msa0441940:CDS |
| CAGCCAGCAAAACTGTGTGC+TGG | 0.629332 | 3_3:-10514855 | Msa0441940:CDS |
| AGACATTGAAGCTCACGGAT+CGG | 0.631337 | 3_3:-10521332 | Msa0441940:CDS |
| GGTAAAAGAAATTTGGCGAG+AGG | 0.632782 | 3_3:-10515443 | Msa0441940:CDS |
| ATCATGGCAGTTGTAAATGG+AGG | 0.633666 | 3_3:+10517497 | None:intergenic |
| AGCTATCGTGGACGAGCACG+TGG | 0.634226 | 3_3:-10514437 | Msa0441940:CDS |
| GCTGTGTGGCGTTGTAAGCG+TGG | 0.636334 | 3_3:-10516566 | Msa0441940:CDS |
| ACTCGAGGAATGAGCTATCG+TGG | 0.638496 | 3_3:-10514449 | Msa0441940:CDS |
| AGCAACAAAGCCCATTCAGG+AGG | 0.640278 | 3_3:+10521076 | None:intergenic |
| TGTAATACATGAATGGGTAT+GGG | 0.640519 | 3_3:-10519282 | Msa0441940:CDS |
| CAGGGCAGACTACAGTAGGA+AGG | 0.640537 | 3_3:+10516482 | None:intergenic |
| GTGGAAGTCACAATAGAGAG+AGG | 0.645325 | 3_3:-10514322 | Msa0441940:CDS |
| AGAGAGTTGATGGAGGCCAG+GGG | 0.648802 | 3_3:-10514374 | Msa0441940:CDS |
| CTTCAGATAGTATTTCGACA+TGG | 0.649097 | 3_3:+10514925 | None:intergenic |
| CTTCCCCTGATTTGTCACTG+AGG | 0.650403 | 3_3:+10515481 | None:intergenic |
| ATACATGAATGGGTATGGGC+TGG | 0.650440 | 3_3:-10519278 | Msa0441940:CDS |
| ACTGTATCAAATGTCTTACA+GGG | 0.656078 | 3_3:-10517449 | Msa0441940:CDS |
| AGCAGCAACCAGAAGACCAG+TGG | 0.662343 | 3_3:+10521030 | None:intergenic |
| GTAACCGGAGGAGTCATGGT+TGG | 0.664027 | 3_3:-10519179 | Msa0441940:CDS |
| CTTCTGATGAACCTAGAAGA+CGG | 0.665644 | 3_3:+10521365 | None:intergenic |
| GACTTTCCGATGTCAACACT+AGG | 0.669720 | 3_3:+10518996 | None:intergenic |
| TACAATGGGAAATAGAAACA+GGG | 0.669876 | 3_3:-10513486 | Msa0441940:three_prime_UTR |
| TTCCCTCAGTGACAAATCAG+GGG | 0.672221 | 3_3:-10515484 | Msa0441940:CDS |
| GCAGCACCAATCATTAAACT+CGG | 0.674844 | 3_3:+10516256 | None:intergenic |
| CTTACCAGAGCATAAGCCTG+GGG | 0.679204 | 3_3:+10516157 | None:intergenic |
| GAAGGTCCTAGTGTTGACAT+CGG | 0.683955 | 3_3:-10519002 | Msa0441940:CDS |
| CAAGACCAAGGAGACAACCA+AGG | 0.688884 | 3_3:+10521053 | None:intergenic |
| GGGAAGGAGAGTGATCCACC+TGG | 0.688942 | 3_3:-10515464 | Msa0441940:CDS |
| CACGGCTAGAGAGTTGATGG+AGG | 0.691369 | 3_3:-10514381 | Msa0441940:CDS |
| ACTTGCAGGAATCTATCCAA+CGG | 0.700362 | 3_3:-10519078 | Msa0441940:CDS |
| TATCCTGGAATATTATACTG+GGG | 0.700995 | 3_3:-10516421 | Msa0441940:CDS |
| CACATCGCCGGAGTTAATGG+CGG | 0.705098 | 3_3:-10521307 | Msa0441940:CDS |
| TTACCAGTAGTTAAACGCGG+TGG | 0.708980 | 3_3:-10514341 | Msa0441940:CDS |
| CAATTACCAGTAGTTAAACG+CGG | 0.710350 | 3_3:-10514344 | Msa0441940:CDS |
| CATTCCTCGAGTACAAACAG+AGG | 0.725332 | 3_3:+10514460 | None:intergenic |
| CTGATATTAGGAATGCTGTG+TGG | 0.784835 | 3_3:-10516580 | Msa0441940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTATAAAAAAAATT+GGG | + | chr3_3:10517150-10517169 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTATAAAAAAAAT+TGG | + | chr3_3:10517151-10517170 | None:intergenic | 0.0% |
| !! | AAAAAAAAATGAGAATTTAA+TGG | - | chr3_3:10517162-10517181 | Msa0441940:intron | 10.0% |
| !! | AAAAAAAATGAGAATTTAAT+GGG | - | chr3_3:10517163-10517182 | Msa0441940:intron | 10.0% |
| !! | ATTTCACAAATAAAATAAAA+AGG | + | chr3_3:10517902-10517921 | None:intergenic | 10.0% |
| !!! | AATATTTTCAACTTATATAT+TGG | - | chr3_3:10519635-10519654 | Msa0441940:intron | 10.0% |
| !! | TCGATAATAATTTGAAAAAA+CGG | - | chr3_3:10514636-10514655 | Msa0441940:intron | 15.0% |
| !!! | ATTGTTTTTCAAATTATTAC+CGG | + | chr3_3:10515089-10515108 | None:intergenic | 15.0% |
| !! | TGACATATATTCTAATATTA+TGG | - | chr3_3:10516341-10516360 | Msa0441940:CDS | 15.0% |
| !! | ATATTATGGTCATTTAATTA+AGG | - | chr3_3:10516355-10516374 | Msa0441940:CDS | 15.0% |
| !! | TAGACATAAAATAATCTAAT+GGG | + | chr3_3:10516477-10516496 | None:intergenic | 15.0% |
| !! | ATAAATTTAGCTAAAACTTA+AGG | + | chr3_3:10517086-10517105 | None:intergenic | 15.0% |
| !! | AAAAGCTCTATAAATAAATA+AGG | + | chr3_3:10517325-10517344 | None:intergenic | 15.0% |
| !! | TAAAATAAAAAGGATGAAAA+AGG | + | chr3_3:10517892-10517911 | None:intergenic | 15.0% |
| !!! | AATATTACTAATTTTGGTAT+TGG | + | chr3_3:10518179-10518198 | None:intergenic | 15.0% |
| !!! | CTTCTTAATATTACTAATTT+TGG | + | chr3_3:10518185-10518204 | None:intergenic | 15.0% |
| !! | ATTAGTAATATTAAGAAGAA+TGG | - | chr3_3:10518187-10518206 | Msa0441940:intron | 15.0% |
| !! | CAAGTTCTATAAATAATAAT+TGG | + | chr3_3:10520578-10520597 | None:intergenic | 15.0% |
| !! | ATTGTCATTAATTTAATCTT+AGG | - | chr3_3:10520600-10520619 | Msa0441940:intron | 15.0% |
| !!! | ATTCATATTCAATATTTTAC+AGG | - | chr3_3:10520679-10520698 | Msa0441940:intron | 15.0% |
| !! | AGATTAAGTATTAGATTTAA+GGG | + | chr3_3:10520942-10520961 | None:intergenic | 15.0% |
| !! | TAGATTAAGTATTAGATTTA+AGG | + | chr3_3:10520943-10520962 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTTAAGCATGTA+AGG | - | chr3_3:10521166-10521185 | Msa0441940:CDS | 15.0% |
| !! | AATTAGAATTTGAAAGTCAA+TGG | + | chr3_3:10513621-10513640 | None:intergenic | 20.0% |
| !! | ATGTGAAGATTGAAAAAAAA+GGG | + | chr3_3:10513651-10513670 | None:intergenic | 20.0% |
| !! | AATGTGAAGATTGAAAAAAA+AGG | + | chr3_3:10513652-10513671 | None:intergenic | 20.0% |
| !! | AATTTGATGAATTTAACAAC+TGG | - | chr3_3:10513709-10513728 | Msa0441940:three_prime_UTR | 20.0% |
| !! | ATTTGATGAATTTAACAACT+GGG | - | chr3_3:10513710-10513729 | Msa0441940:three_prime_UTR | 20.0% |
| !!! | TTTGAGAATGTTTTGTTTTT+TGG | - | chr3_3:10514203-10514222 | Msa0441940:intron | 20.0% |
| !!! | TTGAGAATGTTTTGTTTTTT+GGG | - | chr3_3:10514204-10514223 | Msa0441940:intron | 20.0% |
| !! | ACAAAACTATAAATGAGATA+TGG | + | chr3_3:10514752-10514771 | None:intergenic | 20.0% |
| !! | GGTAATAATTTGAAAAACAA+TGG | - | chr3_3:10515088-10515107 | Msa0441940:intron | 20.0% |
| !! | ACTTTGCATGATTTATTAAT+AGG | - | chr3_3:10515804-10515823 | Msa0441940:CDS | 20.0% |
| !! | ATTGACTATATAAGATTAGT+AGG | + | chr3_3:10515861-10515880 | None:intergenic | 20.0% |
| !! | CTAGACATAAAATAATCTAA+TGG | + | chr3_3:10516478-10516497 | None:intergenic | 20.0% |
| !!! | CATTAGATTATTTTATGTCT+AGG | - | chr3_3:10516476-10516495 | Msa0441940:CDS | 20.0% |
| !! | TTTCTAAATGTGATATTGTT+AGG | - | chr3_3:10516531-10516550 | Msa0441940:CDS | 20.0% |
| !! | TTCTAAATGTGATATTGTTA+GGG | - | chr3_3:10516532-10516551 | Msa0441940:CDS | 20.0% |
| !!! | TTTAATTTTAGTATCATGCT+TGG | + | chr3_3:10516873-10516892 | None:intergenic | 20.0% |
| !! | AATTCACTTAAATAGTTAGT+TGG | + | chr3_3:10516978-10516997 | None:intergenic | 20.0% |
| !! | TTGCTTAAAATTTAATGTAG+AGG | - | chr3_3:10517220-10517239 | Msa0441940:intron | 20.0% |
| !! | TGCTTAAAATTTAATGTAGA+GGG | - | chr3_3:10517221-10517240 | Msa0441940:intron | 20.0% |
| !! | TTCATAGTATTAATCAACAT+TGG | + | chr3_3:10517381-10517400 | None:intergenic | 20.0% |
| !! | TTTGAATAATTCATACAACA+TGG | - | chr3_3:10518370-10518389 | Msa0441940:intron | 20.0% |
| !! | TAATATTCCAGGATATTTAA+GGG | + | chr3_3:10518754-10518773 | None:intergenic | 20.0% |
| !! | ATAATATTCCAGGATATTTA+AGG | + | chr3_3:10518755-10518774 | None:intergenic | 20.0% |
| !!! | AATTTTCAACCTATTTGTTA+CGG | - | chr3_3:10520992-10521011 | Msa0441940:intron | 20.0% |
| !! | AATATACAAGAAGTGATATA+TGG | + | chr3_3:10521505-10521524 | None:intergenic | 20.0% |
| !! | ATATTCGTTTGCATAATTTA+GGG | - | chr3_3:10521623-10521642 | Msa0441940:five_prime_UTR | 20.0% |
| ! | ATGAAAATATAGTGTCTGTT+GGG | + | chr3_3:10513583-10513602 | None:intergenic | 25.0% |
| ! | AATGAAAATATAGTGTCTGT+TGG | + | chr3_3:10513584-10513603 | None:intergenic | 25.0% |
| ! | TGTGAAGATTGAAAAAAAAG+GGG | + | chr3_3:10513650-10513669 | None:intergenic | 25.0% |
| !! | AAAATAAAGTTTTCCAATGC+CGG | - | chr3_3:10513779-10513798 | Msa0441940:exon | 25.0% |
| ! | AGAGATATGTTGAAATTATC+AGG | - | chr3_3:10513930-10513949 | Msa0441940:intron | 25.0% |
| ! | TGTTTGAATGATGATCTTAA+TGG | - | chr3_3:10514297-10514316 | Msa0441940:CDS | 25.0% |
| ! | ATATAGGAAAAAAGCAAACT+AGG | - | chr3_3:10514965-10514984 | Msa0441940:intron | 25.0% |
| !!! | AATGTTGAATTTTAGAAGTC+AGG | - | chr3_3:10515411-10515430 | Msa0441940:CDS | 25.0% |
| ! | TTCCTTCGATTAATAAAAAG+TGG | - | chr3_3:10515442-10515461 | Msa0441940:CDS | 25.0% |
| ! | TCCTTCGATTAATAAAAAGT+GGG | - | chr3_3:10515443-10515462 | Msa0441940:CDS | 25.0% |
| ! | GCATGATTTATTAATAGGAA+TGG | - | chr3_3:10515809-10515828 | Msa0441940:CDS | 25.0% |
| !! | TATAGTCAATTTTCTCATCT+AGG | - | chr3_3:10515871-10515890 | Msa0441940:intron | 25.0% |
| ! | AATATTGGATCAAATAAAGC+AGG | - | chr3_3:10516045-10516064 | Msa0441940:intron | 25.0% |
| !! | TTGTTTATGTTTGAGTTTCT+TGG | - | chr3_3:10516555-10516574 | Msa0441940:CDS | 25.0% |
| !! | ATTTGAAGATGGGAAATTTT+AGG | + | chr3_3:10517040-10517059 | None:intergenic | 25.0% |
| ! | AAAAAAATTGGGGTTTATGA+TGG | + | chr3_3:10517139-10517158 | None:intergenic | 25.0% |
| !! | TTGTGTTTCCTTTCTAATTT+TGG | - | chr3_3:10517510-10517529 | Msa0441940:CDS | 25.0% |
| !! | TTTTGTGGATTTCTAAATGT+TGG | - | chr3_3:10517555-10517574 | Msa0441940:CDS | 25.0% |
| !!! | ACTTTTAAGACTCAAGATTT+AGG | - | chr3_3:10517984-10518003 | Msa0441940:intron | 25.0% |
| ! | ATTGTGCAATTTCAATTCTT+TGG | + | chr3_3:10518025-10518044 | None:intergenic | 25.0% |
| ! | ATTCCTAATATCAGGTATAA+AGG | + | chr3_3:10518594-10518613 | None:intergenic | 25.0% |
| ! | AATATCCTGGAATATTATAC+TGG | - | chr3_3:10518757-10518776 | Msa0441940:intron | 25.0% |
| ! | ATATCCTGGAATATTATACT+GGG | - | chr3_3:10518758-10518777 | Msa0441940:intron | 25.0% |
| ! | ATAGTTGTTTGTTCAAATTC+TGG | - | chr3_3:10519097-10519116 | Msa0441940:CDS | 25.0% |
| !!! | AAAGTTAATTTAACTTGTGC+AGG | - | chr3_3:10519333-10519352 | Msa0441940:intron | 25.0% |
| !!! | ATTTTATTGATTACCATGAG+AGG | + | chr3_3:10519454-10519473 | None:intergenic | 25.0% |
| ! | ATATATTGGCAAAATTTCTC+AGG | - | chr3_3:10519649-10519668 | Msa0441940:intron | 25.0% |
| ! | TATATTGGCAAAATTTCTCA+GGG | - | chr3_3:10519650-10519669 | Msa0441940:intron | 25.0% |
| ! | TCAAATAATGAAGATGATGA+TGG | - | chr3_3:10519773-10519792 | Msa0441940:intron | 25.0% |
| ! | CAAATAATGAAGATGATGAT+GGG | - | chr3_3:10519774-10519793 | Msa0441940:intron | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+AGG | - | chr3_3:10520097-10520116 | Msa0441940:intron | 25.0% |
| ! | ATTGAGAAATTAGGTATGTT+TGG | + | chr3_3:10520205-10520224 | None:intergenic | 25.0% |
| ! | AACAATGACATTGAGAAATT+AGG | + | chr3_3:10520214-10520233 | None:intergenic | 25.0% |
| ! | CTTGAAATATATAAAGACCA+GGG | + | chr3_3:10520476-10520495 | None:intergenic | 25.0% |
| ! | TCTTGAAATATATAAAGACC+AGG | + | chr3_3:10520477-10520496 | None:intergenic | 25.0% |
| ! | TGACAGAAAAAAATGATGAA+AGG | - | chr3_3:10520536-10520555 | Msa0441940:intron | 25.0% |
| ! | AGAAAAAACTGACAGTTAAA+AGG | + | chr3_3:10520649-10520668 | None:intergenic | 25.0% |
| ! | TTGTTATCCGAATACTAATT+TGG | - | chr3_3:10520775-10520794 | Msa0441940:intron | 25.0% |
| !! | CAAATAGGTTGAAAATTTCA+AGG | + | chr3_3:10520989-10521008 | None:intergenic | 25.0% |
| ! | AGATGAAAAACTCTTAAAAG+TGG | + | chr3_3:10521036-10521055 | None:intergenic | 25.0% |
| !! | TCCATTCATATTACTGTTTT+TGG | - | chr3_3:10521276-10521295 | Msa0441940:CDS | 25.0% |
| !!! | CCATTCATATTACTGTTTTT+GGG | - | chr3_3:10521277-10521296 | Msa0441940:CDS | 25.0% |
| ! | TGATATTTATGTTAATGTGC+AGG | - | chr3_3:10521324-10521343 | Msa0441940:CDS | 25.0% |
| !! | TTTGATAATCTAACTTTCTG+TGG | + | chr3_3:10521361-10521380 | None:intergenic | 25.0% |
| ! | ACAGAAAACAATTTGACAAA+TGG | - | chr3_3:10521386-10521405 | Msa0441940:CDS | 25.0% |
| ! | CAGAAAACAATTTGACAAAT+GGG | - | chr3_3:10521387-10521406 | Msa0441940:CDS | 25.0% |
| !!! | ACTCACTATTTCTTTTGTAA+GGG | + | chr3_3:10521440-10521459 | None:intergenic | 25.0% |
| !!! | AACTCACTATTTCTTTTGTA+AGG | + | chr3_3:10521441-10521460 | None:intergenic | 25.0% |
| ! | AAATTATGCAAACGAATATG+AGG | + | chr3_3:10521622-10521641 | None:intergenic | 25.0% |
| ! | CATATTCGTTTGCATAATTT+AGG | - | chr3_3:10521622-10521641 | Msa0441940:five_prime_UTR | 25.0% |
| ! | AGAATACTACTCAATACAAT+GGG | - | chr3_3:10521680-10521699 | Msa0441940:five_prime_UTR | 25.0% |
| GTGAAGATTGAAAAAAAAGG+GGG | + | chr3_3:10513649-10513668 | None:intergenic | 30.0% | |
| AATTTAAGCGATTCCATTGA+TGG | - | chr3_3:10513739-10513758 | Msa0441940:three_prime_UTR | 30.0% | |
| ATTTAAGCGATTCCATTGAT+GGG | - | chr3_3:10513740-10513759 | Msa0441940:three_prime_UTR | 30.0% | |
| ATTACTCAAAAACCCATCAA+TGG | + | chr3_3:10513755-10513774 | None:intergenic | 30.0% | |
| CTTCATTCATTTGATTCTTC+TGG | - | chr3_3:10514059-10514078 | Msa0441940:intron | 30.0% | |
| ! | GAATGATGATCTTAATGGAT+AGG | - | chr3_3:10514302-10514321 | Msa0441940:CDS | 30.0% |
| ! | CAACAACATCTCTGTTTTAT+GGG | - | chr3_3:10514847-10514866 | Msa0441940:CDS | 30.0% |
| ATGTTGATCTCAATGGATAT+AGG | - | chr3_3:10514949-10514968 | Msa0441940:intron | 30.0% | |
| GCAATTACATTTCTGATTAG+AGG | + | chr3_3:10515165-10515184 | None:intergenic | 30.0% | |
| TCAAATTCACAGACTTCAAA+CGG | + | chr3_3:10515204-10515223 | None:intergenic | 30.0% | |
| !! | AAAACAGAAACGTTGTTTCT+TGG | + | chr3_3:10515281-10515300 | None:intergenic | 30.0% |
| ! | AGAAACAACGTTTCTGTTTT+TGG | - | chr3_3:10515281-10515300 | Msa0441940:intron | 30.0% |
| !! | GAAACAACGTTTCTGTTTTT+GGG | - | chr3_3:10515282-10515301 | Msa0441940:intron | 30.0% |
| !!! | AAACAACGTTTCTGTTTTTG+GGG | - | chr3_3:10515283-10515302 | Msa0441940:intron | 30.0% |
| CCTTCGATTAATAAAAAGTG+GGG | - | chr3_3:10515444-10515463 | Msa0441940:CDS | 30.0% | |
| CTTCGATTAATAAAAAGTGG+GGG | - | chr3_3:10515445-10515464 | Msa0441940:CDS | 30.0% | |
| !! | TAGTTAGCTTTGATACTGTT+TGG | - | chr3_3:10515668-10515687 | Msa0441940:intron | 30.0% |
| AGTATGATACACTAGATCTT+TGG | - | chr3_3:10515774-10515793 | Msa0441940:CDS | 30.0% | |
| ATGTAATACATGAATGGGTA+TGG | - | chr3_3:10515897-10515916 | Msa0441940:intron | 30.0% | |
| TGTAATACATGAATGGGTAT+GGG | - | chr3_3:10515898-10515917 | Msa0441940:intron | 30.0% | |
| GTGTGGTTTACTAGAAATAT+TGG | - | chr3_3:10516030-10516049 | Msa0441940:intron | 30.0% | |
| CATCATTAATGAGAATCCAT+TGG | + | chr3_3:10516215-10516234 | None:intergenic | 30.0% | |
| ! | CAATGGATTCTCATTAATGA+TGG | - | chr3_3:10516213-10516232 | Msa0441940:CDS | 30.0% |
| !!! | TTAGGGTTTGGAGATTTTTT+AGG | - | chr3_3:10516614-10516633 | Msa0441940:intron | 30.0% |
| !!! | TAGGGTTTGGAGATTTTTTA+GGG | - | chr3_3:10516615-10516634 | Msa0441940:intron | 30.0% |
| TAGGGTCTATAATTGAGAAT+TGG | - | chr3_3:10516633-10516652 | Msa0441940:intron | 30.0% | |
| !! | AGTTTTATAGGGTTTGAGTT+AGG | + | chr3_3:10516677-10516696 | None:intergenic | 30.0% |
| !! | CCTTGCATATCAGTTTTATA+GGG | + | chr3_3:10516688-10516707 | None:intergenic | 30.0% |
| !! | ACCTTGCATATCAGTTTTAT+AGG | + | chr3_3:10516689-10516708 | None:intergenic | 30.0% |
| ! | AAGCTTTATAAGCACTACTT+GGG | - | chr3_3:10516720-10516739 | Msa0441940:intron | 30.0% |
| !! | AATTCCTAATTGTGCCATTT+GGG | + | chr3_3:10516838-10516857 | None:intergenic | 30.0% |
| ! | TAATTCCTAATTGTGCCATT+TGG | + | chr3_3:10516839-10516858 | None:intergenic | 30.0% |
| AATGGCACAATTAGGAATTA+AGG | - | chr3_3:10516839-10516858 | Msa0441940:intron | 30.0% | |
| TCACTTAAATAGTTAGTTGG+TGG | + | chr3_3:10516975-10516994 | None:intergenic | 30.0% | |
| GTAAAGTGATATATACCTAG+AGG | - | chr3_3:10517007-10517026 | Msa0441940:intron | 30.0% | |
| !! | ATTTTAGGAAAATCACCTCT+AGG | + | chr3_3:10517025-10517044 | None:intergenic | 30.0% |
| !! | AATGAGAATTTAATGGGTTC+AGG | - | chr3_3:10517169-10517188 | Msa0441940:intron | 30.0% |
| !!! | CATTTTTAGTCTCTCTAGTT+TGG | + | chr3_3:10517294-10517313 | None:intergenic | 30.0% |
| !! | AGCATCTTTTGCTATATAGA+AGG | - | chr3_3:10517353-10517372 | Msa0441940:intron | 30.0% |
| !!! | TTTCTAATTTTGGCTGGTTT+CGG | - | chr3_3:10517520-10517539 | Msa0441940:CDS | 30.0% |
| ! | CTATGCATTTTTCTTTCTTC+AGG | - | chr3_3:10517587-10517606 | Msa0441940:intron | 30.0% |
| ATAATCATGGCAGTTGTAAA+TGG | + | chr3_3:10517689-10517708 | None:intergenic | 30.0% | |
| TACAACTGCCATGATTATAT+TGG | - | chr3_3:10517691-10517710 | Msa0441940:intron | 30.0% | |
| AACTGAAGCCAATATAATCA+TGG | + | chr3_3:10517702-10517721 | None:intergenic | 30.0% | |
| AACTGTATCAAATGTCTTAC+AGG | - | chr3_3:10517730-10517749 | Msa0441940:intron | 30.0% | |
| ACTGTATCAAATGTCTTACA+GGG | - | chr3_3:10517731-10517750 | Msa0441940:intron | 30.0% | |
| !!! | ATTGCTACACTTTTTGAGTA+TGG | - | chr3_3:10517819-10517838 | Msa0441940:intron | 30.0% |
| GTGATAACAATACTGTAAGA+CGG | + | chr3_3:10517941-10517960 | None:intergenic | 30.0% | |
| AATTGAAATTGCACAATCCA+GGG | - | chr3_3:10518028-10518047 | Msa0441940:intron | 30.0% | |
| !! | TAGGAAGTAGGTTTGTTAAA+TGG | - | chr3_3:10518095-10518114 | Msa0441940:intron | 30.0% |
| AAAAGGGACAAATAAATGTG+AGG | + | chr3_3:10518229-10518248 | None:intergenic | 30.0% | |
| ! | TCACATTTATTTGTCCCTTT+TGG | - | chr3_3:10518228-10518247 | Msa0441940:intron | 30.0% |
| ! | CACATTTATTTGTCCCTTTT+GGG | - | chr3_3:10518229-10518248 | Msa0441940:intron | 30.0% |
| TTAAAAGAGTTCCAGGAAAA+GGG | - | chr3_3:10518279-10518298 | Msa0441940:intron | 30.0% | |
| ! | GTATCTCTTTTATCTTCGTA+TGG | + | chr3_3:10518409-10518428 | None:intergenic | 30.0% |
| CTAATTAACGATTTACCTCT+AGG | - | chr3_3:10518473-10518492 | Msa0441940:intron | 30.0% | |
| TATGAACATACAATACCTAG+AGG | + | chr3_3:10518491-10518510 | None:intergenic | 30.0% | |
| ! | TCTAGGTATTGTATGTTCAT+AGG | - | chr3_3:10518490-10518509 | Msa0441940:intron | 30.0% |
| CTACCTTTATACCTGATATT+AGG | - | chr3_3:10518588-10518607 | Msa0441940:intron | 30.0% | |
| CTGGATATAGTCAAAAAACT+TGG | + | chr3_3:10518667-10518686 | None:intergenic | 30.0% | |
| !!! | CAAGTTTTTTGACTATATCC+AGG | - | chr3_3:10518665-10518684 | Msa0441940:intron | 30.0% |
| TATCCTGGAATATTATACTG+GGG | - | chr3_3:10518759-10518778 | Msa0441940:intron | 30.0% | |
| TACAAAGTGTAGTTCAATAG+TGG | + | chr3_3:10519152-10519171 | None:intergenic | 30.0% | |
| !! | TTAATTTAACTTGTGCAGGT+TGG | - | chr3_3:10519337-10519356 | Msa0441940:intron | 30.0% |
| !! | TGCTATTTCATATGAATGAC+AGG | - | chr3_3:10519523-10519542 | Msa0441940:intron | 30.0% |
| ATATTGGCAAAATTTCTCAG+GGG | - | chr3_3:10519651-10519670 | Msa0441940:intron | 30.0% | |
| AATCGATGAAGAACTATTTC+TGG | - | chr3_3:10519844-10519863 | Msa0441940:intron | 30.0% | |
| !! | ACTATTTCTGGACAAACTTA+AGG | - | chr3_3:10519856-10519875 | Msa0441940:intron | 30.0% |
| ! | ACGAAGATGATTTTCTTGAT+GGG | - | chr3_3:10520354-10520373 | Msa0441940:intron | 30.0% |
| CATTTACTACATACATCCAA+AGG | + | chr3_3:10520452-10520471 | None:intergenic | 30.0% | |
| TTAAAAGAGCCGTAACAAAT+AGG | + | chr3_3:10521004-10521023 | None:intergenic | 30.0% | |
| CCCAAAAACAGTAATATGAA+TGG | + | chr3_3:10521280-10521299 | None:intergenic | 30.0% | |
| ATTAACTCTTGATTCAAGCT+TGG | - | chr3_3:10521411-10521430 | Msa0441940:five_prime_UTR | 30.0% | |
| !!! | ATATTTTAATGCCACAAGAG+TGG | - | chr3_3:10521520-10521539 | Msa0441940:five_prime_UTR | 30.0% |
| TTATCAAATAACCACTCTTG+TGG | + | chr3_3:10521534-10521553 | None:intergenic | 30.0% | |
| ACAAGAGTGGTTATTTGATA+AGG | - | chr3_3:10521533-10521552 | Msa0441940:five_prime_UTR | 30.0% | |
| !! | TCATTGATTCTTAACGTGTT+GGG | + | chr3_3:10521584-10521603 | None:intergenic | 30.0% |
| !! | ATCATTGATTCTTAACGTGT+TGG | + | chr3_3:10521585-10521604 | None:intergenic | 30.0% |
| CAGAATACTACTCAATACAA+TGG | - | chr3_3:10521679-10521698 | Msa0441940:five_prime_UTR | 30.0% | |
| ATACAATGGGAAATAGAAAC+AGG | - | chr3_3:10521693-10521712 | Msa0441940:five_prime_UTR | 30.0% | |
| TACAATGGGAAATAGAAACA+GGG | - | chr3_3:10521694-10521713 | Msa0441940:five_prime_UTR | 30.0% | |
| !! | TGGTTGCTGCTTTCAATAAA+GGG | - | chr3_3:10514162-10514181 | Msa0441940:intron | 35.0% |
| ! | TGATGATCTTAATGGATAGG+AGG | - | chr3_3:10514305-10514324 | Msa0441940:CDS | 35.0% |
| GTTAGTTACACTCAATGATC+TGG | - | chr3_3:10514349-10514368 | Msa0441940:CDS | 35.0% | |
| ATCTATGAAGCTTCAAGCAT+AGG | - | chr3_3:10514372-10514391 | Msa0441940:CDS | 35.0% | |
| CTATGTGTTAGTGTCATATC+CGG | + | chr3_3:10514406-10514425 | None:intergenic | 35.0% | |
| TGACACTAACACATAGACAT+CGG | - | chr3_3:10514410-10514429 | Msa0441940:CDS | 35.0% | |
| GGAAATGAGCAAAACAAACT+AGG | - | chr3_3:10514511-10514530 | Msa0441940:intron | 35.0% | |
| GAGCAAAACAAACTAGGATA+TGG | - | chr3_3:10514517-10514536 | Msa0441940:intron | 35.0% | |
| ACAAACTAGGATATGGTGAT+AGG | - | chr3_3:10514524-10514543 | Msa0441940:intron | 35.0% | |
| GTTCAACACCAACACAAAAT+TGG | + | chr3_3:10514687-10514706 | None:intergenic | 35.0% | |
| !! | TTTGTGTTGGTGTTGAACAT+CGG | - | chr3_3:10514689-10514708 | Msa0441940:intron | 35.0% |
| !! | AGATGTTGTTGCTTGGATTT+TGG | + | chr3_3:10514838-10514857 | None:intergenic | 35.0% |
| AAAACAGAGATGTTGTTGCT+TGG | + | chr3_3:10514845-10514864 | None:intergenic | 35.0% | |
| ! | GCAACAACATCTCTGTTTTA+TGG | - | chr3_3:10514846-10514865 | Msa0441940:CDS | 35.0% |
| TGTCTGAATGTTGATCTCAA+TGG | - | chr3_3:10514942-10514961 | Msa0441940:intron | 35.0% | |
| GACACTAGATACATAAACAC+CGG | - | chr3_3:10515067-10515086 | Msa0441940:intron | 35.0% | |
| TACATTTCTGATTAGAGGCA+TGG | + | chr3_3:10515160-10515179 | None:intergenic | 35.0% | |
| CAAATTCACAGACTTCAAAC+GGG | + | chr3_3:10515203-10515222 | None:intergenic | 35.0% | |
| !!! | AACAACGTTTCTGTTTTTGG+GGG | - | chr3_3:10515284-10515303 | Msa0441940:intron | 35.0% |
| !! | GTTGAATTTTAGAAGTCAGG+AGG | - | chr3_3:10515414-10515433 | Msa0441940:CDS | 35.0% |
| !! | AATTTTAGAAGTCAGGAGGA+AGG | - | chr3_3:10515418-10515437 | Msa0441940:CDS | 35.0% |
| !!! | CCCCACTTTTTATTAATCGA+AGG | + | chr3_3:10515447-10515466 | None:intergenic | 35.0% |
| AAGCTAACTACAAGTCACAA+AGG | + | chr3_3:10515658-10515677 | None:intergenic | 35.0% | |
| CGTTTGCAATATAGACAGAA+TGG | + | chr3_3:10515745-10515764 | None:intergenic | 35.0% | |
| AGGTGCATGTAATACATGAA+TGG | - | chr3_3:10515891-10515910 | Msa0441940:intron | 35.0% | |
| GGTGCATGTAATACATGAAT+GGG | - | chr3_3:10515892-10515911 | Msa0441940:intron | 35.0% | |
| ! | ATCCTTTTGATACCTGTAAC+CGG | - | chr3_3:10515986-10516005 | Msa0441940:intron | 35.0% |
| AGTCAAAACCTTGTCTTTGA+GGG | + | chr3_3:10516081-10516100 | None:intergenic | 35.0% | |
| AAGTCAAAACCTTGTCTTTG+AGG | + | chr3_3:10516082-10516101 | None:intergenic | 35.0% | |
| ! | ATTCAAGCTGCAGTTACTTT+AGG | - | chr3_3:10516133-10516152 | Msa0441940:intron | 35.0% |
| ! | TGTTTGAGTTTCTTGGTTAC+CGG | - | chr3_3:10516562-10516581 | Msa0441940:CDS | 35.0% |
| CTATCGTAGTTTGACTGTTA+GGG | - | chr3_3:10516597-10516616 | Msa0441940:CDS | 35.0% | |
| GGTCTATAATTGAGAATTGG+CGG | - | chr3_3:10516636-10516655 | Msa0441940:intron | 35.0% | |
| ! | ATTGAGAATTGGCGGTTTTA+TGG | - | chr3_3:10516644-10516663 | Msa0441940:intron | 35.0% |
| !! | AATTGGCGGTTTTATGGTTT+GGG | - | chr3_3:10516650-10516669 | Msa0441940:intron | 35.0% |
| CCCTATAAAACTGATATGCA+AGG | - | chr3_3:10516685-10516704 | Msa0441940:intron | 35.0% | |
| ! | CAAGCTTTATAAGCACTACT+TGG | - | chr3_3:10516719-10516738 | Msa0441940:intron | 35.0% |
| TTCATTCTGTTAGGTATCAG+AGG | + | chr3_3:10516782-10516801 | None:intergenic | 35.0% | |
| ! | TTTAGAGCAGATGTGATTTG+AGG | + | chr3_3:10516933-10516952 | None:intergenic | 35.0% |
| TTAATGTAGAGGGACTTCAT+TGG | - | chr3_3:10517231-10517250 | Msa0441940:intron | 35.0% | |
| ATCTGTGAAAATTGAGTCCA+TGG | - | chr3_3:10517434-10517453 | Msa0441940:CDS | 35.0% | |
| !! | GTTTCCTTTCTAATTTTGGC+TGG | - | chr3_3:10517514-10517533 | Msa0441940:CDS | 35.0% |
| GAAACCAGCCAAAATTAGAA+AGG | + | chr3_3:10517521-10517540 | None:intergenic | 35.0% | |
| !!! | ACACTTTTTGAGTATGGTTC+AGG | - | chr3_3:10517825-10517844 | Msa0441940:intron | 35.0% |
| GAATTGAAATTGCACAATCC+AGG | - | chr3_3:10518027-10518046 | Msa0441940:intron | 35.0% | |
| !! | ATAGACATGCTTTAGGAAGT+AGG | - | chr3_3:10518083-10518102 | Msa0441940:intron | 35.0% |
| TCAGACTTCTATAAGATCTG+CGG | - | chr3_3:10518150-10518169 | Msa0441940:intron | 35.0% | |
| GAACATGTTAAAAGAGTTCC+AGG | - | chr3_3:10518272-10518291 | Msa0441940:intron | 35.0% | |
| GTTAAAAGAGTTCCAGGAAA+AGG | - | chr3_3:10518278-10518297 | Msa0441940:intron | 35.0% | |
| TAAAAGAGTTCCAGGAAAAG+GGG | - | chr3_3:10518280-10518299 | Msa0441940:intron | 35.0% | |
| ! | AATTATTCAACCCCTTTTCC+TGG | + | chr3_3:10518293-10518312 | None:intergenic | 35.0% |
| GTATCTTCGAAGAGAGTTAT+AGG | - | chr3_3:10518313-10518332 | Msa0441940:intron | 35.0% | |
| TCGAAGAGAGTTATAGGAAA+AGG | - | chr3_3:10518319-10518338 | Msa0441940:intron | 35.0% | |
| ATACAACATGGAAACTGTGT+GGG | - | chr3_3:10518382-10518401 | Msa0441940:intron | 35.0% | |
| TTGAATACTCAGATGTCGAT+TGG | - | chr3_3:10518437-10518456 | Msa0441940:intron | 35.0% | |
| ! | TGAATACTCAGATGTCGATT+GGG | - | chr3_3:10518438-10518457 | Msa0441940:intron | 35.0% |
| ! | AGGTATTGTATGTTCATAGG+AGG | - | chr3_3:10518493-10518512 | Msa0441940:intron | 35.0% |
| GACTATATCCAGGAGAAATT+TGG | - | chr3_3:10518675-10518694 | Msa0441940:intron | 35.0% | |
| ATCATTGCCCTTAAATATCC+TGG | - | chr3_3:10518744-10518763 | Msa0441940:intron | 35.0% | |
| AAACCCCAGTATAATATTCC+AGG | + | chr3_3:10518765-10518784 | None:intergenic | 35.0% | |
| GTTATCAATTCAGCAATTCC+TGG | - | chr3_3:10518981-10519000 | Msa0441940:CDS | 35.0% | |
| ! | TGCTATTCTATAGTGCGTTT+TGG | - | chr3_3:10519214-10519233 | Msa0441940:CDS | 35.0% |
| AGAAGTAGAACTGAAGTCAA+AGG | + | chr3_3:10519397-10519416 | None:intergenic | 35.0% | |
| CATATGAAATAGCAGAACAG+TGG | + | chr3_3:10519517-10519536 | None:intergenic | 35.0% | |
| TAACAAAATGAGTCCTGACA+TGG | - | chr3_3:10519548-10519567 | Msa0441940:intron | 35.0% | |
| GATAACCATCAATCACACAA+TGG | + | chr3_3:10519576-10519595 | None:intergenic | 35.0% | |
| TATTGGCAAAATTTCTCAGG+GGG | - | chr3_3:10519652-10519671 | Msa0441940:intron | 35.0% | |
| TCCACCTGGTAAAAGAAATT+TGG | - | chr3_3:10519730-10519749 | Msa0441940:intron | 35.0% | |
| !! | AATGAAGATGATGATGGGAA+TGG | - | chr3_3:10519779-10519798 | Msa0441940:intron | 35.0% |
| !! | TTCATCGATTTCTTCAAGCT+CGG | + | chr3_3:10519834-10519853 | None:intergenic | 35.0% |
| GCAGTCTTAACAACAAAAGA+TGG | + | chr3_3:10519925-10519944 | None:intergenic | 35.0% | |
| AGCTTATGCAGATAGCTAAT+AGG | + | chr3_3:10520058-10520077 | None:intergenic | 35.0% | |
| CTTCAGATAGTATTTCGACA+TGG | + | chr3_3:10520258-10520277 | None:intergenic | 35.0% | |
| CATGTCGAAATACTATCTGA+AGG | - | chr3_3:10520256-10520275 | Msa0441940:intron | 35.0% | |
| ! | TCTTTGAGAGTTACAGATGA+TGG | + | chr3_3:10520284-10520303 | None:intergenic | 35.0% |
| ! | GACGAAGATGATTTTCTTGA+TGG | - | chr3_3:10520353-10520372 | Msa0441940:intron | 35.0% |
| CTTGATGGGATATTGACATA+TGG | - | chr3_3:10520368-10520387 | Msa0441940:intron | 35.0% | |
| TGACATATGGTGACATTAGA+AGG | - | chr3_3:10520381-10520400 | Msa0441940:intron | 35.0% | |
| AGAAGTCTCATTAGACTTCT+CGG | + | chr3_3:10520414-10520433 | None:intergenic | 35.0% | |
| ATGTATGTAGTAAATGTCCC+TGG | - | chr3_3:10520456-10520475 | Msa0441940:intron | 35.0% | |
| CAATTACCAGTAGTTAAACG+CGG | - | chr3_3:10520836-10520855 | Msa0441940:intron | 35.0% | |
| TCCTTCATTATGACGAACTA+TGG | - | chr3_3:10520900-10520919 | Msa0441940:intron | 35.0% | |
| TGAAAATTTCAAGGAGATGC+AGG | + | chr3_3:10520980-10520999 | None:intergenic | 35.0% | |
| AACACTGCTTCTATTGTACT+CGG | + | chr3_3:10521120-10521139 | None:intergenic | 35.0% | |
| GGAAAGAATTATGCTCAGTT+TGG | + | chr3_3:10521259-10521278 | None:intergenic | 35.0% | |
| GAGTAGTATTCTGCTTCTTA+TGG | + | chr3_3:10521672-10521691 | None:intergenic | 35.0% | |
| CTTCTGATGAACCTAGAAGA+CGG | + | chr3_3:10513818-10513837 | None:intergenic | 40.0% | |
| !! | CTGGTTGCTGCTTTCAATAA+AGG | - | chr3_3:10514161-10514180 | Msa0441940:intron | 40.0% |
| !! | GGTTGCTGCTTTCAATAAAG+GGG | - | chr3_3:10514163-10514182 | Msa0441940:intron | 40.0% |
| !! | CTTAATGGATAGGAGGTGTT+AGG | - | chr3_3:10514312-10514331 | Msa0441940:CDS | 40.0% |
| GTGTCTGAATGTGATCTCAA+TGG | - | chr3_3:10514452-10514471 | Msa0441940:CDS | 40.0% | |
| GTGTCTGAATGTGATCTCAA+TGG | - | chr3_3:10514452-10514471 | Msa0441940:CDS | 40.0% | |
| CTTGTGACTTAAGAGGTCAT+AGG | - | chr3_3:10514811-10514830 | Msa0441940:CDS | 40.0% | |
| GCAAACTAGGATACAGTGTT+AGG | - | chr3_3:10514978-10514997 | Msa0441940:intron | 40.0% | |
| ! | CAAACACACATTGACGGATA+TGG | + | chr3_3:10515130-10515149 | None:intergenic | 40.0% |
| ! | TGGTGTCAAACACACATTGA+CGG | + | chr3_3:10515136-10515155 | None:intergenic | 40.0% |
| TCACAAGCAGCATGAATACA+TGG | + | chr3_3:10515234-10515253 | None:intergenic | 40.0% | |
| CTTGTGACTTAAGAGGTAAC+AGG | - | chr3_3:10515247-10515266 | Msa0441940:intron | 40.0% | |
| ! | CCTAAAGTACTACACGAAGA+GGG | + | chr3_3:10515372-10515391 | None:intergenic | 40.0% |
| ! | TCCTAAAGTACTACACGAAG+AGG | + | chr3_3:10515373-10515392 | None:intergenic | 40.0% |
| CGATTAATAAAAAGTGGGGG+TGG | - | chr3_3:10515448-10515467 | Msa0441940:CDS | 40.0% | |
| AATAAAAAGTGGGGGTGGTT+TGG | - | chr3_3:10515453-10515472 | Msa0441940:CDS | 40.0% | |
| TACATAAAAGCCAGACGAAG+AGG | + | chr3_3:10515703-10515722 | None:intergenic | 40.0% | |
| AGTTATTCCCCTCAAAGACA+AGG | - | chr3_3:10516070-10516089 | Msa0441940:intron | 40.0% | |
| GTCAAAACCTTGTCTTTGAG+GGG | + | chr3_3:10516080-10516099 | None:intergenic | 40.0% | |
| !!! | CAAGGTTTTGACTTACTTGC+AGG | - | chr3_3:10516088-10516107 | Msa0441940:intron | 40.0% |
| ACTTGCAGGAATCTATCCAA+CGG | - | chr3_3:10516102-10516121 | Msa0441940:intron | 40.0% | |
| AGGAATCTATCCAACGGTAA+AGG | - | chr3_3:10516108-10516127 | Msa0441940:intron | 40.0% | |
| !! | TTTAGGTACTGGCTGTTCAT+TGG | - | chr3_3:10516150-10516169 | Msa0441940:intron | 40.0% |
| !! | TTAGGTACTGGCTGTTCATT+GGG | - | chr3_3:10516151-10516170 | Msa0441940:intron | 40.0% |
| ! | AAAATAGCACTTGTTGCAGC+TGG | - | chr3_3:10516253-10516272 | Msa0441940:CDS | 40.0% |
| TTGAGTTTGTACTCACGCAA+GGG | - | chr3_3:10516435-10516454 | Msa0441940:CDS | 40.0% | |
| TGTCTAGGCATTCATTGAGA+AGG | - | chr3_3:10516491-10516510 | Msa0441940:CDS | 40.0% | |
| GTCTAGGCATTCATTGAGAA+GGG | - | chr3_3:10516492-10516511 | Msa0441940:CDS | 40.0% | |
| ACGATAGCATTGCATCAATC+CGG | + | chr3_3:10516584-10516603 | None:intergenic | 40.0% | |
| GCTATCGTAGTTTGACTGTT+AGG | - | chr3_3:10516596-10516615 | Msa0441940:CDS | 40.0% | |
| GTAGTTTGACTGTTAGGGTT+TGG | - | chr3_3:10516602-10516621 | Msa0441940:intron | 40.0% | |
| !! | GAATTGGCGGTTTTATGGTT+TGG | - | chr3_3:10516649-10516668 | Msa0441940:intron | 40.0% |
| !! | ATTGGCGGTTTTATGGTTTG+GGG | - | chr3_3:10516651-10516670 | Msa0441940:intron | 40.0% |
| TCTGTTAGGTATCAGAGGAT+GGG | + | chr3_3:10516777-10516796 | None:intergenic | 40.0% | |
| TTCTGTTAGGTATCAGAGGA+TGG | + | chr3_3:10516778-10516797 | None:intergenic | 40.0% | |
| GTGGTTGCAAATTGCAATGA+AGG | - | chr3_3:10516809-10516828 | Msa0441940:intron | 40.0% | |
| GGCACAATTAGGAATTAAGG+AGG | - | chr3_3:10516842-10516861 | Msa0441940:intron | 40.0% | |
| ! | GTGGTGAGACTTTAAGCTTT+TGG | + | chr3_3:10516956-10516975 | None:intergenic | 40.0% |
| TTAAGGATTCTGCAAGATGC+GGG | + | chr3_3:10517069-10517088 | None:intergenic | 40.0% | |
| CTTAAGGATTCTGCAAGATG+CGG | + | chr3_3:10517070-10517089 | None:intergenic | 40.0% | |
| ! | CTCTCTAGTTTGGACAAAGA+GGG | + | chr3_3:10517284-10517303 | None:intergenic | 40.0% |
| ! | TCTCTCTAGTTTGGACAAAG+AGG | + | chr3_3:10517285-10517304 | None:intergenic | 40.0% |
| GCTTGGAAGTAAAATGTCCA+TGG | + | chr3_3:10517454-10517473 | None:intergenic | 40.0% | |
| ! | GACATTTTACTTCCAAGCTC+TGG | - | chr3_3:10517456-10517475 | Msa0441940:CDS | 40.0% |
| ATCATGGCAGTTGTAAATGG+AGG | + | chr3_3:10517686-10517705 | None:intergenic | 40.0% | |
| AGCAGATTTCAACTCGTACT+CGG | + | chr3_3:10517780-10517799 | None:intergenic | 40.0% | |
| GCATGCTATAGACATGCTTT+AGG | - | chr3_3:10518076-10518095 | Msa0441940:intron | 40.0% | |
| CAGAACATAGCATCCCAAAA+GGG | + | chr3_3:10518245-10518264 | None:intergenic | 40.0% | |
| ACAGAACATAGCATCCCAAA+AGG | + | chr3_3:10518246-10518265 | None:intergenic | 40.0% | |
| GGATGCTATGTTCTGTATCT+TGG | - | chr3_3:10518250-10518269 | Msa0441940:intron | 40.0% | |
| CATACAACATGGAAACTGTG+TGG | - | chr3_3:10518381-10518400 | Msa0441940:intron | 40.0% | |
| CACACAGCATTCCTAATATC+AGG | + | chr3_3:10518602-10518621 | None:intergenic | 40.0% | |
| CTGATATTAGGAATGCTGTG+TGG | - | chr3_3:10518600-10518619 | Msa0441940:intron | 40.0% | |
| ATACTGGGGTTTCACAAATG+TGG | - | chr3_3:10518773-10518792 | Msa0441940:intron | 40.0% | |
| GTGGAAGAAATTCTACGTAC+TGG | - | chr3_3:10518792-10518811 | Msa0441940:intron | 40.0% | |
| TGAGTTAGAAGCCATATTCC+AGG | + | chr3_3:10518834-10518853 | None:intergenic | 40.0% | |
| TGGCTTCTAACTCAATTAGC+AGG | - | chr3_3:10518840-10518859 | Msa0441940:intron | 40.0% | |
| AACTCAATTAGCAGGTGCTA+AGG | - | chr3_3:10518848-10518867 | Msa0441940:intron | 40.0% | |
| TACGCACCGAGTTTAATGAT+TGG | - | chr3_3:10518918-10518937 | Msa0441940:CDS | 40.0% | |
| GCAGCACCAATCATTAAACT+CGG | + | chr3_3:10518927-10518946 | None:intergenic | 40.0% | |
| !! | TTAATGATTGGTGCTGCAGT+TGG | - | chr3_3:10518930-10518949 | Msa0441940:CDS | 40.0% |
| ATTGACGACACAATGCTTCA+CGG | + | chr3_3:10519062-10519081 | None:intergenic | 40.0% | |
| ACAGCAGTGTTGTCAAAAAG+TGG | + | chr3_3:10519240-10519259 | None:intergenic | 40.0% | |
| CTGTGAAGTATGTCAGTTGT+AGG | - | chr3_3:10519256-10519275 | Msa0441940:CDS | 40.0% | |
| !! | TTAACTTGTGCAGGTTGGAA+TGG | - | chr3_3:10519342-10519361 | Msa0441940:intron | 40.0% |
| TAGAATACTGCTTCCTCTCA+TGG | - | chr3_3:10519438-10519457 | Msa0441940:intron | 40.0% | |
| TGGTTCCATTGTGTGATTGA+TGG | - | chr3_3:10519568-10519587 | Msa0441940:intron | 40.0% | |
| ! | GCCAAATTTCTTTTACCAGG+TGG | + | chr3_3:10519734-10519753 | None:intergenic | 40.0% |
| ! | CTCGCCAAATTTCTTTTACC+AGG | + | chr3_3:10519737-10519756 | None:intergenic | 40.0% |
| GGTAAAAGAAATTTGGCGAG+AGG | - | chr3_3:10519737-10519756 | Msa0441940:intron | 40.0% | |
| ! | GGTTTAGAACTCTGCATTGT+TGG | - | chr3_3:10519800-10519819 | Msa0441940:intron | 40.0% |
| GCTATCTGCATAAGCTATCT+CGG | - | chr3_3:10520062-10520081 | Msa0441940:intron | 40.0% | |
| AGTGTATTTGGGAGAGCTTA+TGG | + | chr3_3:10520141-10520160 | None:intergenic | 40.0% | |
| TCTCCCAAATACACTCACTT+GGG | - | chr3_3:10520146-10520165 | Msa0441940:intron | 40.0% | |
| AAGCCCAAGTGAGTGTATTT+GGG | + | chr3_3:10520152-10520171 | None:intergenic | 40.0% | |
| TAAGCCCAAGTGAGTGTATT+TGG | + | chr3_3:10520153-10520172 | None:intergenic | 40.0% | |
| ATGTCATTGTTCCTCTTGTC+AGG | - | chr3_3:10520223-10520242 | Msa0441940:intron | 40.0% | |
| TCCGAATACTAATTTGGCCA+CGG | - | chr3_3:10520781-10520800 | Msa0441940:intron | 40.0% | |
| GCCATAGTTCGTCATAATGA+AGG | + | chr3_3:10520904-10520923 | None:intergenic | 40.0% | |
| !!! | TGTTTTTGGGCATCAACTCT+TGG | - | chr3_3:10521290-10521309 | Msa0441940:CDS | 40.0% |
| GATTCTTAACGTGTTGGGAT+TGG | + | chr3_3:10521579-10521598 | None:intergenic | 40.0% | |
| ! | AGTTGATCGTTTTCCGGCAT+TGG | + | chr3_3:10513795-10513814 | None:intergenic | 45.0% |
| !! | AGACGGAGTTGATCGTTTTC+CGG | + | chr3_3:10513801-10513820 | None:intergenic | 45.0% |
| AACGATCAACTCCGTCTTCT+AGG | - | chr3_3:10513804-10513823 | Msa0441940:CDS | 45.0% | |
| GAACGAGACATTGAAGCTCA+CGG | - | chr3_3:10513843-10513862 | Msa0441940:intron | 45.0% | |
| AGACATTGAAGCTCACGGAT+CGG | - | chr3_3:10513848-10513867 | Msa0441940:intron | 45.0% | |
| ! | TGATAGTGCACCTCCTGAAT+GGG | - | chr3_3:10514094-10514113 | Msa0441940:intron | 45.0% |
| TCAAGCATAGGCACAGATAC+CGG | - | chr3_3:10514384-10514403 | Msa0441940:CDS | 45.0% | |
| CAACACAAAATTGGCGCATG+TGG | + | chr3_3:10514678-10514697 | None:intergenic | 45.0% | |
| ! | CACATGCGCCAATTTTGTGT+TGG | - | chr3_3:10514676-10514695 | Msa0441940:intron | 45.0% |
| ! | CATGCTGCTTGTGACTTAAG+AGG | - | chr3_3:10514804-10514823 | Msa0441940:CDS | 45.0% |
| ! | TTTCTGATTAGAGGCATGGC+TGG | + | chr3_3:10515156-10515175 | None:intergenic | 45.0% |
| CACAGACTTCAAACGGGATA+TGG | + | chr3_3:10515197-10515216 | None:intergenic | 45.0% | |
| ! | CATGCTGCTTGTGACTTAAG+AGG | - | chr3_3:10514804-10514823 | Msa0441940:CDS | 45.0% |
| CCCTCTTCGTGTAGTACTTT+AGG | - | chr3_3:10515369-10515388 | Msa0441940:CDS | 45.0% | |
| ATACATGAATGGGTATGGGC+TGG | - | chr3_3:10515902-10515921 | Msa0441940:intron | 45.0% | |
| TGGCTTCGTTTGCAGAGATT+GGG | - | chr3_3:10515947-10515966 | Msa0441940:intron | 45.0% | |
| TGCAGAGATTGGGTGATACA+TGG | - | chr3_3:10515957-10515976 | Msa0441940:intron | 45.0% | |
| CTCCGGTTACAGGTATCAAA+AGG | + | chr3_3:10515991-10516010 | None:intergenic | 45.0% | |
| ! | CTTTTGATACCTGTAACCGG+AGG | - | chr3_3:10515989-10516008 | Msa0441940:intron | 45.0% |
| GCTTGAATAGCCTTTACCGT+TGG | + | chr3_3:10516121-10516140 | None:intergenic | 45.0% | |
| ! | GCTGCAGTTACTTTAGGTAC+TGG | - | chr3_3:10516139-10516158 | Msa0441940:intron | 45.0% |
| ATGTCAACACTAGGACCTTC+AGG | + | chr3_3:10516178-10516197 | None:intergenic | 45.0% | |
| !! | GAAGGTCCTAGTGTTGACAT+CGG | - | chr3_3:10516178-10516197 | Msa0441940:CDS | 45.0% |
| GACTTTCCGATGTCAACACT+AGG | + | chr3_3:10516187-10516206 | None:intergenic | 45.0% | |
| ! | AATGCAGTGCAAGGCATCAA+AGG | + | chr3_3:10516383-10516402 | None:intergenic | 45.0% |
| ATGCTTGACAATGCAGTGCA+AGG | + | chr3_3:10516392-10516411 | None:intergenic | 45.0% | |
| TGCACTGCATTGTCAAGCAT+AGG | - | chr3_3:10516392-10516411 | Msa0441940:CDS | 45.0% | |
| GCACTGCATTGTCAAGCATA+GGG | - | chr3_3:10516393-10516412 | Msa0441940:CDS | 45.0% | |
| CTTGAGTTTGTACTCACGCA+AGG | - | chr3_3:10516434-10516453 | Msa0441940:CDS | 45.0% | |
| AACACTGCCTCGAGAAGATA+TGG | + | chr3_3:10516746-10516765 | None:intergenic | 45.0% | |
| ACCTAACAGAATGAACGAGC+TGG | - | chr3_3:10516787-10516806 | Msa0441940:intron | 45.0% | |
| ACCAGCTCGTTCATTCTGTT+AGG | + | chr3_3:10516791-10516810 | None:intergenic | 45.0% | |
| TAACAGAATGAACGAGCTGG+TGG | - | chr3_3:10516790-10516809 | Msa0441940:intron | 45.0% | |
| TGCAATGAAGGCAACCCAAA+TGG | - | chr3_3:10516821-10516840 | Msa0441940:intron | 45.0% | |
| GCAACCCAAATGGCACAATT+AGG | - | chr3_3:10516831-10516850 | Msa0441940:intron | 45.0% | |
| CGGGAGTAGCATTTGAAGAT+GGG | + | chr3_3:10517050-10517069 | None:intergenic | 45.0% | |
| GTTTGGACAAAGAGGGACTT+TGG | + | chr3_3:10517277-10517296 | None:intergenic | 45.0% | |
| TTAAGCTAGAAGCCAGAGCT+TGG | + | chr3_3:10517471-10517490 | None:intergenic | 45.0% | |
| !!! | TTTTGGCTGGTTTCGGAGTA+CGG | - | chr3_3:10517527-10517546 | Msa0441940:CDS | 45.0% |
| !!! | CGGAGTACGGGTTTATTTTG+TGG | - | chr3_3:10517540-10517559 | Msa0441940:CDS | 45.0% |
| TCGCTATTGAAACTGTGCTG+AGG | - | chr3_3:10517639-10517658 | Msa0441940:intron | 45.0% | |
| ! | GGGCACTGTAAAAGCTGATT+GGG | + | chr3_3:10517759-10517778 | None:intergenic | 45.0% |
| GCAGATTTCAACTCGTACTC+GGG | + | chr3_3:10517779-10517798 | None:intergenic | 45.0% | |
| ! | TACGAGTTGAAATCTGCTGC+TGG | - | chr3_3:10517782-10517801 | Msa0441940:intron | 45.0% |
| GAAATTGCACAATCCAGGGA+TGG | - | chr3_3:10518032-10518051 | Msa0441940:intron | 45.0% | |
| CGAGATTACTATACCATCCC+TGG | + | chr3_3:10518048-10518067 | None:intergenic | 45.0% | |
| CAATGACTCGTTTGGTTGCT+TGG | - | chr3_3:10518637-10518656 | Msa0441940:intron | 45.0% | |
| TAGGAAGGCCAAATTTCTCC+TGG | + | chr3_3:10518686-10518705 | None:intergenic | 45.0% | |
| TATTGCCACAGCTCTTTGCA+AGG | - | chr3_3:10518872-10518891 | Msa0441940:intron | 45.0% | |
| ATTGCCACAGCTCTTTGCAA+GGG | - | chr3_3:10518873-10518892 | Msa0441940:intron | 45.0% | |
| TGCTTCACGGGTAGTAAAGT+TGG | + | chr3_3:10519049-10519068 | None:intergenic | 45.0% | |
| TTGACGACACAATGCTTCAC+GGG | + | chr3_3:10519061-10519080 | None:intergenic | 45.0% | |
| CACGTATCACAGAACAGTAG+TGG | - | chr3_3:10519178-10519197 | Msa0441940:CDS | 45.0% | |
| GAATGTCACTGTCGACATTG+AGG | - | chr3_3:10519278-10519297 | Msa0441940:CDS | 45.0% | |
| TGTCGACATTGAGGCTGATT+TGG | - | chr3_3:10519287-10519306 | Msa0441940:CDS | 45.0% | |
| TCACACAATGGAACCATGTC+AGG | + | chr3_3:10519564-10519583 | None:intergenic | 45.0% | |
| AAAATTTCTCAGGGGGCTGT+TGG | - | chr3_3:10519659-10519678 | Msa0441940:intron | 45.0% | |
| AAATTTCTCAGGGGGCTGTT+GGG | - | chr3_3:10519660-10519679 | Msa0441940:intron | 45.0% | |
| GTTCCCTCAGTGACAAATCA+GGG | - | chr3_3:10519695-10519714 | Msa0441940:intron | 45.0% | |
| TTCCCTCAGTGACAAATCAG+GGG | - | chr3_3:10519696-10519715 | Msa0441940:intron | 45.0% | |
| ! | TTCCCCTGATTTGTCACTGA+GGG | + | chr3_3:10519701-10519720 | None:intergenic | 45.0% |
| GAACTCTGCATTGTTGGAGA+TGG | - | chr3_3:10519806-10519825 | Msa0441940:intron | 45.0% | |
| GATGGAAGATGTCGAAGATC+AGG | + | chr3_3:10519907-10519926 | None:intergenic | 45.0% | |
| AAGCTATCTCGGAGAGCTAA+TGG | - | chr3_3:10520073-10520092 | Msa0441940:intron | 45.0% | |
| CTCTCCCAAATACACTCACT+TGG | - | chr3_3:10520145-10520164 | Msa0441940:intron | 45.0% | |
| TTCCTCTTGTCAGGTTTCTC+AGG | - | chr3_3:10520232-10520251 | Msa0441940:intron | 45.0% | |
| TAAGAGCGACTCAGATCCTT+TGG | - | chr3_3:10520433-10520452 | Msa0441940:intron | 45.0% | |
| GTTTCCTCTGTTTGTACTCG+AGG | - | chr3_3:10520716-10520735 | Msa0441940:intron | 45.0% | |
| CATTCCTCGAGTACAAACAG+AGG | + | chr3_3:10520723-10520742 | None:intergenic | 45.0% | |
| GCCGTGGCCAAATTAGTATT+CGG | + | chr3_3:10520785-10520804 | None:intergenic | 45.0% | |
| TTACCAGTAGTTAAACGCGG+TGG | - | chr3_3:10520839-10520858 | Msa0441940:intron | 45.0% | |
| GTGGAAGTCACAATAGAGAG+AGG | - | chr3_3:10520858-10520877 | Msa0441940:intron | 45.0% | |
| GAGAGGAAGCGAAGAATTGT+CGG | - | chr3_3:10520875-10520894 | Msa0441940:intron | 45.0% | |
| AACGTGTTGGGATTGGAACT+TGG | + | chr3_3:10521572-10521591 | None:intergenic | 45.0% | |
| !!! | TTTTTTTATAAAAAAAATTG+GGG | + | chr3_3:10517149-10517168 | None:intergenic | 5.0% |
| GAACACATCGCCGGAGTTAA+TGG | - | chr3_3:10513870-10513889 | Msa0441940:intron | 50.0% | |
| ! | CTGATAGTGCACCTCCTGAA+TGG | - | chr3_3:10514093-10514112 | Msa0441940:intron | 50.0% |
| AGCAACAAAGCCCATTCAGG+AGG | + | chr3_3:10514107-10514126 | None:intergenic | 50.0% | |
| AGGAGCAACAAAGCCCATTC+AGG | + | chr3_3:10514110-10514129 | None:intergenic | 50.0% | |
| !! | GAATGGGCTTTGTTGCTCCT+TGG | - | chr3_3:10514110-10514129 | Msa0441940:intron | 50.0% |
| TTGCTCCTTGGTTGTCTCCT+TGG | - | chr3_3:10514122-10514141 | Msa0441940:intron | 50.0% | |
| CAAGACCAAGGAGACAACCA+AGG | + | chr3_3:10514130-10514149 | None:intergenic | 50.0% | |
| ! | GCACTGACGCTTCTGATTGA+AGG | + | chr3_3:10514720-10514739 | None:intergenic | 50.0% |
| GTGTCTGTGTCTGTGCTTCA+TGG | + | chr3_3:10515052-10515071 | None:intergenic | 50.0% | |
| TACCCTCATCAGATTCCACC+CGG | - | chr3_3:10515323-10515342 | Msa0441940:intron | 50.0% | |
| ! | GCAGTTTTCTCCTCTTCGTC+TGG | - | chr3_3:10515690-10515709 | Msa0441940:intron | 50.0% |
| ACAGAATGGACACAGAGCAC+GGG | + | chr3_3:10515731-10515750 | None:intergenic | 50.0% | |
| GACAGAATGGACACAGAGCA+CGG | + | chr3_3:10515732-10515751 | None:intergenic | 50.0% | |
| CAATCTCTGCAAACGAAGCC+AGG | + | chr3_3:10515948-10515967 | None:intergenic | 50.0% | |
| CTGGCTTCGTTTGCAGAGAT+TGG | - | chr3_3:10515946-10515965 | Msa0441940:intron | 50.0% | |
| GTCATGGTTGGCATGATGTG+TGG | - | chr3_3:10516013-10516032 | Msa0441940:intron | 50.0% | |
| GCAGCAGCTGGAATTTCTTC+AGG | - | chr3_3:10516277-10516296 | Msa0441940:CDS | 50.0% | |
| TGCATTGTCAAGCATAGGGC+TGG | - | chr3_3:10516397-10516416 | Msa0441940:CDS | 50.0% | |
| GCATTGTCAAGCATAGGGCT+GGG | - | chr3_3:10516398-10516417 | Msa0441940:CDS | 50.0% | |
| CATTGTCAAGCATAGGGCTG+GGG | - | chr3_3:10516399-10516418 | Msa0441940:CDS | 50.0% | |
| GCGTGAGTACAAACTCAAGC+AGG | + | chr3_3:10516433-10516452 | None:intergenic | 50.0% | |
| AGTTTGTACTCACGCAAGGG+CGG | - | chr3_3:10516438-10516457 | Msa0441940:CDS | 50.0% | |
| ACTTGGGCCATATCTTCTCG+AGG | - | chr3_3:10516736-10516755 | Msa0441940:intron | 50.0% | |
| GCGGGAGTAGCATTTGAAGA+TGG | + | chr3_3:10517051-10517070 | None:intergenic | 50.0% | |
| !! | TTTGGCTGGTTTCGGAGTAC+GGG | - | chr3_3:10517528-10517547 | Msa0441940:CDS | 50.0% |
| GGAGAATTCTCTGCACGAAG+AGG | + | chr3_3:10517665-10517684 | None:intergenic | 50.0% | |
| ! | CGGGCACTGTAAAAGCTGAT+TGG | + | chr3_3:10517760-10517779 | None:intergenic | 50.0% |
| AAGCGTGGCAATGACTCGTT+TGG | - | chr3_3:10518629-10518648 | Msa0441940:intron | 50.0% | |
| CTCCTAAACCACCTATGGCA+GGG | + | chr3_3:10518719-10518738 | None:intergenic | 50.0% | |
| CCATAGGTGGTTTAGGAGCT+GGG | - | chr3_3:10518721-10518740 | Msa0441940:intron | 50.0% | |
| GTGCTTCTGCTCCTGGAATA+TGG | - | chr3_3:10518820-10518839 | Msa0441940:intron | 50.0% | |
| TGTGCAACAGCAGCATTTCC+AGG | + | chr3_3:10519002-10519021 | None:intergenic | 50.0% | |
| CTTACCAGAGCATAAGCCTG+GGG | + | chr3_3:10519026-10519045 | None:intergenic | 50.0% | |
| GCTTACCAGAGCATAAGCCT+GGG | + | chr3_3:10519027-10519046 | None:intergenic | 50.0% | |
| GTGTCGTCAATTGTAGCTCG+TGG | - | chr3_3:10519071-10519090 | Msa0441940:CDS | 50.0% | |
| TGTCACTGAGGGAACCCAAA+TGG | + | chr3_3:10519690-10519709 | None:intergenic | 50.0% | |
| GGTTCCCTCAGTGACAAATC+AGG | - | chr3_3:10519694-10519713 | Msa0441940:intron | 50.0% | |
| ! | CTTCCCCTGATTTGTCACTG+AGG | + | chr3_3:10519702-10519721 | None:intergenic | 50.0% |
| CTCAGTGACAAATCAGGGGA+AGG | - | chr3_3:10519700-10519719 | Msa0441940:intron | 50.0% | |
| GGAAGATGTCGAAGATCAGG+AGG | + | chr3_3:10519904-10519923 | None:intergenic | 50.0% | |
| ! | CTACCAGCACACAGTTTTGC+TGG | + | chr3_3:10520331-10520350 | None:intergenic | 50.0% |
| ACTCGAGGAATGAGCTATCG+TGG | - | chr3_3:10520731-10520750 | Msa0441940:intron | 50.0% | |
| !! | TAGAGAGTTGATGGAGGCCA+GGG | - | chr3_3:10520805-10520824 | Msa0441940:intron | 50.0% |
| TGGTAATTGCTTAACGCCCC+TGG | + | chr3_3:10520825-10520844 | None:intergenic | 50.0% | |
| CTTCCACCGCGTTTAACTAC+TGG | + | chr3_3:10520845-10520864 | None:intergenic | 50.0% | |
| ACGAACTATGGCACTGTCTC+AGG | - | chr3_3:10520912-10520931 | Msa0441940:intron | 50.0% | |
| CACATCGCCGGAGTTAATGG+CGG | - | chr3_3:10513873-10513892 | Msa0441940:intron | 55.0% | |
| ACCACCACCGCCATTAACTC+CGG | + | chr3_3:10513883-10513902 | None:intergenic | 55.0% | |
| !! | GCGGTAGTGGGAGTGGTAAA+GGG | - | chr3_3:10513904-10513923 | Msa0441940:intron | 55.0% |
| !! | TGTCTCCTTGGTCTTGCCAC+TGG | - | chr3_3:10514134-10514153 | Msa0441940:intron | 55.0% |
| GAAGACCAGTGGCAAGACCA+AGG | + | chr3_3:10514142-10514161 | None:intergenic | 55.0% | |
| !! | TGGTCTTGCCACTGGTCTTC+TGG | - | chr3_3:10514142-10514161 | Msa0441940:intron | 55.0% |
| AGCAGCAACCAGAAGACCAG+TGG | + | chr3_3:10514153-10514172 | None:intergenic | 55.0% | |
| !! | ATGGGCTGGTACTCCGAATG+AGG | - | chr3_3:10515916-10515935 | Msa0441940:intron | 55.0% |
| !! | TGGGCTGGTACTCCGAATGA+GGG | - | chr3_3:10515917-10515936 | Msa0441940:intron | 55.0% |
| ACCTGTAACCGGAGGAGTCA+TGG | - | chr3_3:10515997-10516016 | Msa0441940:intron | 55.0% | |
| ACCATGACTCCTCCGGTTAC+AGG | + | chr3_3:10516001-10516020 | None:intergenic | 55.0% | |
| GTAACCGGAGGAGTCATGGT+TGG | - | chr3_3:10516001-10516020 | Msa0441940:intron | 55.0% | |
| CATGCCAACCATGACTCCTC+CGG | + | chr3_3:10516008-10516027 | None:intergenic | 55.0% | |
| GGCTGTTCATTGGGTCCTGA+AGG | - | chr3_3:10516160-10516179 | Msa0441940:intron | 55.0% | |
| ATCGGAAAGTCGTGCGCCAA+TGG | - | chr3_3:10516196-10516215 | Msa0441940:CDS | 55.0% | |
| GGCTTCAATGCAGCAGTTGC+AGG | - | chr3_3:10517608-10517627 | Msa0441940:intron | 55.0% | |
| CAGGGCAGACTACAGTAGGA+AGG | + | chr3_3:10518701-10518720 | None:intergenic | 55.0% | |
| ATGGCAGGGCAGACTACAGT+AGG | + | chr3_3:10518705-10518724 | None:intergenic | 55.0% | |
| ACTGTAGTCTGCCCTGCCAT+AGG | - | chr3_3:10518705-10518724 | Msa0441940:intron | 55.0% | |
| TGCCCTGCCATAGGTGGTTT+AGG | - | chr3_3:10518714-10518733 | Msa0441940:intron | 55.0% | |
| GCTCCTAAACCACCTATGGC+AGG | + | chr3_3:10518720-10518739 | None:intergenic | 55.0% | |
| GCCATAGGTGGTTTAGGAGC+TGG | - | chr3_3:10518720-10518739 | Msa0441940:intron | 55.0% | |
| CCCAGCTCCTAAACCACCTA+TGG | + | chr3_3:10518724-10518743 | None:intergenic | 55.0% | |
| !! | GGAAAGAGTGCTTCTGCTCC+TGG | - | chr3_3:10518813-10518832 | Msa0441940:intron | 55.0% |
| AGAGCCCTTGCAAAGAGCTG+TGG | + | chr3_3:10518880-10518899 | None:intergenic | 55.0% | |
| ACAGCTCTTTGCAAGGGCTC+TGG | - | chr3_3:10518879-10518898 | Msa0441940:intron | 55.0% | |
| CAGCTCTTTGCAAGGGCTCT+GGG | - | chr3_3:10518880-10518899 | Msa0441940:intron | 55.0% | |
| !! | GCTGCAGTTGGTGCTGTGTT+TGG | - | chr3_3:10518942-10518961 | Msa0441940:CDS | 55.0% |
| !! | GCAGTTGGTGCTGTGTTTGG+AGG | - | chr3_3:10518945-10518964 | Msa0441940:CDS | 55.0% |
| ACAACCCCAGGCTTATGCTC+TGG | - | chr3_3:10519019-10519038 | Msa0441940:CDS | 55.0% | |
| GGCTTACCAGAGCATAAGCC+TGG | + | chr3_3:10519028-10519047 | None:intergenic | 55.0% | |
| GGCCTGAGAAACCTGACAAG+AGG | + | chr3_3:10520237-10520256 | None:intergenic | 55.0% | |
| CAGCCAGCAAAACTGTGTGC+TGG | - | chr3_3:10520325-10520344 | Msa0441940:intron | 55.0% | |
| CTCCATCAACTCTCTAGCCG+TGG | + | chr3_3:10520801-10520820 | None:intergenic | 55.0% | |
| !! | CACGGCTAGAGAGTTGATGG+AGG | - | chr3_3:10520799-10520818 | Msa0441940:intron | 55.0% |
| !! | CTAGAGAGTTGATGGAGGCC+AGG | - | chr3_3:10520804-10520823 | Msa0441940:intron | 55.0% |
| !! | AGAGAGTTGATGGAGGCCAG+GGG | - | chr3_3:10520806-10520825 | Msa0441940:intron | 55.0% |
| CACGGATCGGAACACATCGC+CGG | - | chr3_3:10513861-10513880 | Msa0441940:intron | 60.0% | |
| ATCGCCGGAGTTAATGGCGG+TGG | - | chr3_3:10513876-10513895 | Msa0441940:intron | 60.0% | |
| ! | GGAGTTAATGGCGGTGGTGG+TGG | - | chr3_3:10513882-10513901 | Msa0441940:intron | 60.0% |
| !! | GTTAATGGCGGTGGTGGTGG+CGG | - | chr3_3:10513885-10513904 | Msa0441940:intron | 60.0% |
| !! | GGCGGTAGTGGGAGTGGTAA+AGG | - | chr3_3:10513903-10513922 | Msa0441940:intron | 60.0% |
| CGCCGGGTGGAATCTGATGA+GGG | + | chr3_3:10515328-10515347 | None:intergenic | 60.0% | |
| CCTCATCAGATTCCACCCGG+CGG | - | chr3_3:10515326-10515345 | Msa0441940:CDS | 60.0% | |
| CAATGCACAAAGCCTCCGCC+GGG | + | chr3_3:10515344-10515363 | None:intergenic | 60.0% | |
| CCAATGCACAAAGCCTCCGC+CGG | + | chr3_3:10515345-10515364 | None:intergenic | 60.0% | |
| ! | CGGCGGAGGCTTTGTGCATT+GGG | - | chr3_3:10515343-10515362 | Msa0441940:CDS | 60.0% |
| AGCCAGGCAGCACCCTCATT+CGG | + | chr3_3:10515932-10515951 | None:intergenic | 60.0% | |
| GCTGTGTGGCGTTGTAAGCG+TGG | - | chr3_3:10518614-10518633 | Msa0441940:intron | 60.0% | |
| GTAGTCTGCCCTGCCATAGG+TGG | - | chr3_3:10518708-10518727 | Msa0441940:intron | 60.0% | |
| !! | TGCAAGGGCTCTGGGCTTGT+AGG | - | chr3_3:10518888-10518907 | Msa0441940:intron | 60.0% |
| !! | AAGGGCTCTGGGCTTGTAGG+TGG | - | chr3_3:10518891-10518910 | Msa0441940:intron | 60.0% |
| TGCTGCTGTTGCACAACCCC+AGG | - | chr3_3:10519007-10519026 | Msa0441940:CDS | 60.0% | |
| !! | GGCTGTTGGGCTGGCCATTT+GGG | - | chr3_3:10519673-10519692 | Msa0441940:intron | 60.0% |
| GGGAAGGAGAGTGATCCACC+TGG | - | chr3_3:10519716-10519735 | Msa0441940:intron | 60.0% | |
| AGCTATCGTGGACGAGCACG+TGG | - | chr3_3:10520743-10520762 | Msa0441940:intron | 60.0% | |
| GGCCACGGCTAGAGAGTTGA+TGG | - | chr3_3:10520796-10520815 | Msa0441940:intron | 60.0% | |
| GCCGGAGTTAATGGCGGTGG+TGG | - | chr3_3:10513879-10513898 | Msa0441940:intron | 65.0% | |
| CCGCCGGGTGGAATCTGATG+AGG | + | chr3_3:10515329-10515348 | None:intergenic | 65.0% | |
| CATCAGATTCCACCCGGCGG+AGG | - | chr3_3:10515329-10515348 | Msa0441940:CDS | 65.0% | |
| ! | CCGGCGGAGGCTTTGTGCAT+TGG | - | chr3_3:10515342-10515361 | Msa0441940:CDS | 65.0% |
| !! | CTCCGAATGAGGGTGCTGCC+TGG | - | chr3_3:10515927-10515946 | Msa0441940:intron | 65.0% |
| GTTGCAGCTGGTGCAGCAGC+TGG | - | chr3_3:10516265-10516284 | Msa0441940:CDS | 65.0% | |
| TTCTCAGGGGGCTGTTGGGC+TGG | - | chr3_3:10519664-10519683 | Msa0441940:intron | 65.0% | |
| !! | GGGCTGTTGGGCTGGCCATT+TGG | - | chr3_3:10519672-10519691 | Msa0441940:intron | 65.0% |
| !! | GCGGTGGTGGTGGCGGTAGT+GGG | - | chr3_3:10513892-10513911 | Msa0441940:intron | 70.0% |
| !! | GGTGGTGGCGGTAGTGGGAG+TGG | - | chr3_3:10513897-10513916 | Msa0441940:intron | 70.0% |
| TGCACAAAGCCTCCGCCGGG+TGG | + | chr3_3:10515341-10515360 | None:intergenic | 70.0% | |
| !! | GGCGGTGGTGGTGGCGGTAG+TGG | - | chr3_3:10513891-10513910 | Msa0441940:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 10513468 | 10521734 | 10513468 | ID=Msa0441940;Name=Msa0441940 |
| chr3_3 | mRNA | 10513468 | 10521734 | 10513468 | ID=Msa0441940-mRNA-1;Parent=Msa0441940;Name=Msa0441940-mRNA-1;_AED=0.09;_eAED=0.09;_QI=327|1|1|1|1|1|9|319|757 |
| chr3_3 | exon | 10513468 | 10513856 | 10513468 | ID=Msa0441940-mRNA-1:exon:2322;Parent=Msa0441940-mRNA-1 |
| chr3_3 | exon | 10514269 | 10514501 | 10514269 | ID=Msa0441940-mRNA-1:exon:2321;Parent=Msa0441940-mRNA-1 |
| chr3_3 | exon | 10514745 | 10514957 | 10514745 | ID=Msa0441940-mRNA-1:exon:2320;Parent=Msa0441940-mRNA-1 |
| chr3_3 | exon | 10515325 | 10515531 | 10515325 | ID=Msa0441940-mRNA-1:exon:2319;Parent=Msa0441940-mRNA-1 |
| chr3_3 | exon | 10515743 | 10515847 | 10515743 | ID=Msa0441940-mRNA-1:exon:2318;Parent=Msa0441940-mRNA-1 |
| chr3_3 | exon | 10516162 | 10516616 | 10516162 | ID=Msa0441940-mRNA-1:exon:2317;Parent=Msa0441940-mRNA-1 |
| chr3_3 | exon | 10517399 | 10517593 | 10517399 | ID=Msa0441940-mRNA-1:exon:2316;Parent=Msa0441940-mRNA-1 |
| chr3_3 | exon | 10518904 | 10519309 | 10518904 | ID=Msa0441940-mRNA-1:exon:2315;Parent=Msa0441940-mRNA-1 |
| chr3_3 | exon | 10521018 | 10521734 | 10521018 | ID=Msa0441940-mRNA-1:exon:2314;Parent=Msa0441940-mRNA-1 |
| chr3_3 | five_prime_UTR | 10521408 | 10521734 | 10521408 | ID=Msa0441940-mRNA-1:five_prime_utr;Parent=Msa0441940-mRNA-1 |
| chr3_3 | CDS | 10521018 | 10521407 | 10521018 | ID=Msa0441940-mRNA-1:cds;Parent=Msa0441940-mRNA-1 |
| chr3_3 | CDS | 10518904 | 10519309 | 10518904 | ID=Msa0441940-mRNA-1:cds;Parent=Msa0441940-mRNA-1 |
| chr3_3 | CDS | 10517399 | 10517593 | 10517399 | ID=Msa0441940-mRNA-1:cds;Parent=Msa0441940-mRNA-1 |
| chr3_3 | CDS | 10516162 | 10516616 | 10516162 | ID=Msa0441940-mRNA-1:cds;Parent=Msa0441940-mRNA-1 |
| chr3_3 | CDS | 10515743 | 10515847 | 10515743 | ID=Msa0441940-mRNA-1:cds;Parent=Msa0441940-mRNA-1 |
| chr3_3 | CDS | 10515325 | 10515531 | 10515325 | ID=Msa0441940-mRNA-1:cds;Parent=Msa0441940-mRNA-1 |
| chr3_3 | CDS | 10514745 | 10514957 | 10514745 | ID=Msa0441940-mRNA-1:cds;Parent=Msa0441940-mRNA-1 |
| chr3_3 | CDS | 10514269 | 10514501 | 10514269 | ID=Msa0441940-mRNA-1:cds;Parent=Msa0441940-mRNA-1 |
| chr3_3 | CDS | 10513787 | 10513856 | 10513787 | ID=Msa0441940-mRNA-1:cds;Parent=Msa0441940-mRNA-1 |
| chr3_3 | three_prime_UTR | 10513468 | 10513786 | 10513468 | ID=Msa0441940-mRNA-1:three_prime_utr;Parent=Msa0441940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
