Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489590 | XP_013458840.1 | 95.032 | 785 | 11 | 2 | 1 | 785 | 1 | 757 | 0.0 | 1509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489590 | sp|Q8RXR2|CLCF_ARATH | 67.696 | 777 | 182 | 11 | 39 | 785 | 44 | 781 | 0.0 | 976 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489590 | A0A072UTF6 | 95.032 | 785 | 11 | 2 | 1 | 785 | 1 | 757 | 0.0 | 1509 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0441940 | Msa0489590 | 0.838385 | 2.967610e-57 | -8.615850e-47 |
| Msa0240650 | Msa0489590 | 0.813357 | 2.666575e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489590 | MtrunA17_Chr3g0079741 | 94.790 | 787 | 11 | 3 | 1 | 785 | 1 | 759 | 0.0 | 1503 |
| Msa0489590 | MtrunA17_Chr5g0448751 | 37.335 | 758 | 380 | 16 | 35 | 758 | 2 | 698 | 1.88e-115 | 365 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489590 | AT1G55620.2 | 67.696 | 777 | 182 | 11 | 39 | 785 | 44 | 781 | 0.0 | 976 |
| Msa0489590 | AT1G55620.1 | 69.952 | 619 | 142 | 5 | 177 | 785 | 1 | 585 | 0.0 | 823 |
| Msa0489590 | AT4G35440.1 | 39.264 | 652 | 329 | 13 | 103 | 735 | 68 | 671 | 5.73e-129 | 401 |
| Msa0489590 | AT4G35440.2 | 39.264 | 652 | 329 | 13 | 103 | 735 | 68 | 671 | 2.17e-128 | 401 |
Find 228 sgRNAs with CRISPR-Local
Find 530 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATTCGTTTGCATAATTT+AGG | 0.121116 | 3_4:-10146896 | Msa0489590:three_prime_UTR |
| GGGCTGTTGGGCTGGCCATT+TGG | 0.134286 | 3_4:-10148846 | Msa0489590:CDS |
| GGCTGTTGGGCTGGCCATTT+GGG | 0.170279 | 3_4:-10148845 | Msa0489590:CDS |
| ATAATATTCCAGGATATTTA+AGG | 0.176331 | 3_4:+10149766 | None:intergenic |
| AATTGAAGCGATTTCATTAA+TGG | 0.194430 | 3_4:-10154651 | Msa0489590:five_prime_UTR |
| AATCGATGAAGAACTATTTC+TGG | 0.200927 | 3_4:-10148674 | Msa0489590:CDS |
| ACAGCTCTTTGCAAGGGCTC+TGG | 0.217875 | 3_4:-10149639 | Msa0489590:CDS |
| CTGGCTTCGTTTGCAGAGAT+TGG | 0.220386 | 3_4:-10152572 | Msa0489590:CDS |
| TTGTTATCCGAATACTAATT+TGG | 0.225513 | 3_4:-10147743 | Msa0489590:CDS |
| GACTATATCCAGGAGAAATT+TGG | 0.229814 | 3_4:-10149843 | Msa0489590:CDS |
| CTTCATTTATTTGATTCTTC+TGG | 0.229853 | 3_4:-10154325 | Msa0489590:CDS |
| AACTGTATCAAATGTCTTAC+AGG | 0.230240 | 3_4:-10150788 | Msa0489590:CDS |
| AAGAAGCATAGTGCAATTTC+TGG | 0.257145 | 3_4:+10146794 | None:intergenic |
| GAGTAGTATTCTGCTTCTTA+TGG | 0.264903 | 3_4:+10146849 | None:intergenic |
| CTACCTTTATACCTGATATT+AGG | 0.275635 | 3_4:-10149930 | Msa0489590:CDS |
| ATTCAAGCTGCAGTTACTTT+AGG | 0.280234 | 3_4:-10152385 | Msa0489590:CDS |
| TACAACTGCCATGATTATAT+TGG | 0.284492 | 3_4:-10150827 | Msa0489590:CDS |
| AATATCCTGGAATATTATAC+TGG | 0.291535 | 3_4:-10149761 | Msa0489590:CDS |
| CTTGTTGCTGCTTTCAATAA+AGG | 0.292178 | 3_4:-10154223 | Msa0489590:CDS |
| TGCAAGGGCTCTGGGCTTGT+AGG | 0.300501 | 3_4:-10149630 | Msa0489590:CDS |
| ATTAGAATTTGAAATTCTAA+TGG | 0.303299 | 3_4:+10154776 | None:intergenic |
| TTTAGGTACTGGCTGTTCAT+TGG | 0.303630 | 3_4:-10152368 | Msa0489590:CDS |
| TTGCTCCTTGGTTGTCTCCT+TGG | 0.310407 | 3_4:-10154262 | Msa0489590:CDS |
| AACGATCAACTCCGTCTTCT+AGG | 0.310860 | 3_4:-10154586 | Msa0489590:CDS |
| ACCATGACTCCTCCGGTTAC+AGG | 0.314186 | 3_4:+10152520 | None:intergenic |
| GAACACATCGCCGGAGTTAA+TGG | 0.314664 | 3_4:-10154520 | Msa0489590:CDS |
| ATATTCGTTTGCATAATTTA+GGG | 0.316154 | 3_4:-10146895 | Msa0489590:three_prime_UTR |
| CAGCTCTTTGCAAGGGCTCT+GGG | 0.316199 | 3_4:-10149638 | Msa0489590:CDS |
| GGCGGTGGCGGTGGAGGTAG+TGG | 0.319359 | 3_4:-10154499 | Msa0489590:CDS |
| GTGCTTCTGCTCCTGGAATA+TGG | 0.331356 | 3_4:-10149698 | Msa0489590:CDS |
| ACTATTTCTGGACAAACTTA+AGG | 0.331504 | 3_4:-10148662 | Msa0489590:intron |
| CAATGACTCGTTTGGTTGCT+TGG | 0.331580 | 3_4:-10149881 | Msa0489590:CDS |
| ATAATCATGGCAGTTGTAAA+TGG | 0.332811 | 3_4:+10150832 | None:intergenic |
| TTGTTGCTGCTTTCAATAAA+GGG | 0.333792 | 3_4:-10154222 | Msa0489590:CDS |
| TCCACCTGGTAAAAGAAATT+TGG | 0.333930 | 3_4:-10148788 | Msa0489590:CDS |
| GGTTTAGAACTCTGCATTGT+TGG | 0.350768 | 3_4:-10148718 | Msa0489590:CDS |
| GGCTTCAATGCAGCAGTTGC+AGG | 0.351636 | 3_4:-10150910 | Msa0489590:CDS |
| GTGTGGTTTACTAGAAATAT+TGG | 0.355175 | 3_4:-10152488 | Msa0489590:CDS |
| ATTGAAGCGATTTCATTAAT+GGG | 0.356362 | 3_4:-10154650 | Msa0489590:five_prime_UTR |
| GCTGCAGTTGGTGCTGTGTT+TGG | 0.356598 | 3_4:-10149576 | Msa0489590:CDS |
| TTCCTCTTGTCAGGTTTCTC+AGG | 0.357791 | 3_4:-10148286 | Msa0489590:intron |
| TTAGGTACTGGCTGTTCATT+GGG | 0.358475 | 3_4:-10152367 | Msa0489590:CDS |
| GCAGCAGCTGGAATTTCTTC+AGG | 0.362055 | 3_4:-10152241 | Msa0489590:intron |
| ATACAATGGGAAAGAGAAAC+AGG | 0.362934 | 3_4:-10146825 | Msa0489590:three_prime_UTR |
| TGCCCTGCCATAGGTGGTTT+AGG | 0.367716 | 3_4:-10149804 | Msa0489590:CDS |
| ATTCCTAATATCAGGTATAA+AGG | 0.376141 | 3_4:+10149927 | None:intergenic |
| GCCATAGGTGGTTTAGGAGC+TGG | 0.378901 | 3_4:-10149798 | Msa0489590:CDS |
| AATGAGAATATAGTGTTTGT+TGG | 0.379744 | 3_4:+10154813 | None:intergenic |
| TGTCGACATTGAGGCTGATT+TGG | 0.381424 | 3_4:-10149231 | Msa0489590:CDS |
| GGAGGTAGTGGGAGTGGTAA+AGG | 0.382584 | 3_4:-10154487 | Msa0489590:CDS |
| AGAGATATGTTGAAATTATC+AGG | 0.385849 | 3_4:-10154460 | Msa0489590:CDS |
| AGGAGCAACAAAGCCCATTC+AGG | 0.387645 | 3_4:+10154277 | None:intergenic |
| GGTTCCCTCAGTGACAAATC+AGG | 0.389342 | 3_4:-10148824 | Msa0489590:CDS |
| ACAGAAAACAATTTGACAAA+TGG | 0.391756 | 3_4:-10147132 | Msa0489590:CDS |
| TAAGAGCGACTCAGATCCTT+TGG | 0.394845 | 3_4:-10148085 | Msa0489590:CDS |
| GAATGGGCTTTGTTGCTCCT+TGG | 0.397932 | 3_4:-10154274 | Msa0489590:CDS |
| GGCTTACCAGAGCATAAGCC+TGG | 0.405869 | 3_4:+10149493 | None:intergenic |
| GGAAAGAGTGCTTCTGCTCC+TGG | 0.406413 | 3_4:-10149705 | Msa0489590:CDS |
| AAGTCAAAACCTTGTCTTTG+AGG | 0.411275 | 3_4:+10152439 | None:intergenic |
| TGACATATGGTGACATTAGA+AGG | 0.411341 | 3_4:-10148137 | Msa0489590:CDS |
| GTTAATGGCGGTGGCGGTGG+AGG | 0.411426 | 3_4:-10154505 | Msa0489590:CDS |
| CGGGCACTGTAAAAGCTGAT+TGG | 0.411686 | 3_4:+10150761 | None:intergenic |
| ACAAGAGTGGTTATTTGATA+AGG | 0.412286 | 3_4:-10146985 | Msa0489590:three_prime_UTR |
| TGTCTCCTTGGTCTTGCCAC+TGG | 0.413211 | 3_4:-10154250 | Msa0489590:CDS |
| AATTTGATGAATTTAACAAC+TGG | 0.413985 | 3_4:-10154681 | Msa0489590:five_prime_UTR |
| CTTCCACCGCGTTTAACTAC+TGG | 0.414609 | 3_4:+10147676 | None:intergenic |
| ATGTCAACACTAGGACCTTC+AGG | 0.420080 | 3_4:+10152343 | None:intergenic |
| AGAAGTCTCATTAGACTTCT+CGG | 0.421457 | 3_4:+10148107 | None:intergenic |
| TCATTGATTCTTAACGTGTT+GGG | 0.421711 | 3_4:+10146937 | None:intergenic |
| GATTCTTAACGTGTTGGGAT+TGG | 0.421937 | 3_4:+10146942 | None:intergenic |
| GGAGTTAATGGCGGTGGCGG+TGG | 0.422789 | 3_4:-10154508 | Msa0489590:CDS |
| TGTGCAACAGCAGCATTTCC+AGG | 0.423733 | 3_4:+10149519 | None:intergenic |
| GTTGCAGCTGGTGCAGCAGC+TGG | 0.424808 | 3_4:-10152253 | Msa0489590:CDS |
| AATATACAAGAAGTGATATA+TGG | 0.425734 | 3_4:+10147016 | None:intergenic |
| TCCTTCATTATGACGAACTA+TGG | 0.426948 | 3_4:-10147618 | Msa0489590:CDS |
| ATCATTGATTCTTAACGTGT+TGG | 0.428471 | 3_4:+10146936 | None:intergenic |
| ATCATTGCCCTTAAATATCC+TGG | 0.429383 | 3_4:-10149774 | Msa0489590:CDS |
| ACGAACTATGGCACTGTCTC+AGG | 0.429918 | 3_4:-10147606 | Msa0489590:intron |
| CACACAGCATTCCTAATATC+AGG | 0.431743 | 3_4:+10149919 | None:intergenic |
| ATGAGAATATAGTGTTTGTT+GGG | 0.435433 | 3_4:+10154814 | None:intergenic |
| CTGATAGTGCACCTCCTGAA+TGG | 0.436429 | 3_4:-10154291 | Msa0489590:CDS |
| GGCCACGGCTAGAGAGTTGA+TGG | 0.437465 | 3_4:-10147722 | Msa0489590:CDS |
| TCAAATAATGAAGATGATGA+TGG | 0.439967 | 3_4:-10148745 | Msa0489590:CDS |
| CTTGATGGGATATTGACATA+TGG | 0.439987 | 3_4:-10148150 | Msa0489590:CDS |
| TGAGTTAGAAGCCATATTCC+AGG | 0.441628 | 3_4:+10149687 | None:intergenic |
| CTGTGAAGTATGTCAGTTGT+AGG | 0.444307 | 3_4:-10149262 | Msa0489590:CDS |
| AGCCAGGCAGCACCCTCATT+CGG | 0.445698 | 3_4:+10152589 | None:intergenic |
| GCAGTTGGTGCTGTGTTTGG+AGG | 0.445882 | 3_4:-10149573 | Msa0489590:CDS |
| GTTATCAATTCAGCAATTCC+TGG | 0.446728 | 3_4:-10149537 | Msa0489590:CDS |
| AAACCCCAGTATAATATTCC+AGG | 0.447643 | 3_4:+10149756 | None:intergenic |
| AGTCAAAACCTTGTCTTTGA+GGG | 0.448717 | 3_4:+10152440 | None:intergenic |
| GCCGTGGCCAAATTAGTATT+CGG | 0.450163 | 3_4:+10147736 | None:intergenic |
| CCATAGGTGGTTTAGGAGCT+GGG | 0.452875 | 3_4:-10149797 | Msa0489590:CDS |
| TAATATTCCAGGATATTTAA+GGG | 0.456614 | 3_4:+10149767 | None:intergenic |
| CTAGAGAGTTGATGGAGGCC+AGG | 0.458606 | 3_4:-10147714 | Msa0489590:CDS |
| GTGGAAGAAATTCTACGTAC+TGG | 0.465680 | 3_4:-10149726 | Msa0489590:CDS |
| TCTTTGAGAGTTACAGATGA+TGG | 0.466147 | 3_4:+10148237 | None:intergenic |
| GGCGGTGGAGGTAGTGGGAG+TGG | 0.467870 | 3_4:-10154493 | Msa0489590:CDS |
| GAGGTAGTGGGAGTGGTAAA+GGG | 0.468028 | 3_4:-10154486 | Msa0489590:CDS |
| GAACTCTGCATTGTTGGAGA+TGG | 0.470679 | 3_4:-10148712 | Msa0489590:CDS |
| TGCTGCTGTTGCACAACCCC+AGG | 0.472828 | 3_4:-10149511 | Msa0489590:CDS |
| AGGTGCATGTAATACATGAA+TGG | 0.473264 | 3_4:-10152627 | Msa0489590:CDS |
| CCCAGCTCCTAAACCACCTA+TGG | 0.473469 | 3_4:+10149797 | None:intergenic |
| AACGTGTTGGGATTGGAACT+TGG | 0.473675 | 3_4:+10146949 | None:intergenic |
| GTTTGTTGGGATCACTTGCT+AGG | 0.473933 | 3_4:+10154827 | None:intergenic |
| CTCCGAATGAGGGTGCTGCC+TGG | 0.475061 | 3_4:-10152591 | Msa0489590:CDS |
| TTCATCGATTTCTTCAAGCT+CGG | 0.478662 | 3_4:+10148687 | None:intergenic |
| CAGAAAACAATTTGACAAAT+GGG | 0.478761 | 3_4:-10147131 | Msa0489590:CDS |
| ATGTAATACATGAATGGGTA+TGG | 0.481494 | 3_4:-10152621 | Msa0489590:CDS |
| AGAAGCATAGTGCAATTTCT+GGG | 0.482200 | 3_4:+10146795 | None:intergenic |
| TGGCTTCGTTTGCAGAGATT+GGG | 0.483027 | 3_4:-10152571 | Msa0489590:CDS |
| TGATAGTGCACCTCCTGAAT+GGG | 0.483817 | 3_4:-10154290 | Msa0489590:CDS |
| GGCTGTTCATTGGGTCCTGA+AGG | 0.484109 | 3_4:-10152358 | Msa0489590:CDS |
| TGCAGAGATTGGGTGATACA+TGG | 0.484884 | 3_4:-10152561 | Msa0489590:CDS |
| ATCGGAAAGTCGTGCGCCAA+TGG | 0.485806 | 3_4:-10152322 | Msa0489590:CDS |
| AGCAGATTTCAACTCGTACT+CGG | 0.486135 | 3_4:+10150741 | None:intergenic |
| GAGAGGAAGCGAAGAATTGT+CGG | 0.486398 | 3_4:-10147643 | Msa0489590:CDS |
| GGTGCATGTAATACATGAAT+GGG | 0.486735 | 3_4:-10152626 | Msa0489590:CDS |
| ATTAACTCTTGATTCAAGCT+TGG | 0.488193 | 3_4:-10147107 | Msa0489590:exon |
| TACGCACCGAGTTTAATGAT+TGG | 0.489864 | 3_4:-10149600 | Msa0489590:CDS |
| TAGAATACTGCTTCCTCTCA+TGG | 0.492339 | 3_4:-10149080 | Msa0489590:intron |
| AAGCGTGGCAATGACTCGTT+TGG | 0.492664 | 3_4:-10149889 | Msa0489590:CDS |
| CATCATTAATGAGAATCCAT+TGG | 0.492781 | 3_4:+10152306 | None:intergenic |
| AAATTATGCAAACGAATATG+AGG | 0.492841 | 3_4:+10146899 | None:intergenic |
| TTCCCCTGATTTGTCACTGA+GGG | 0.495318 | 3_4:+10148820 | None:intergenic |
| GGGCACTGTAAAAGCTGATT+GGG | 0.497926 | 3_4:+10150762 | None:intergenic |
| ACTGTAGTCTGCCCTGCCAT+AGG | 0.499166 | 3_4:-10149813 | Msa0489590:CDS |
| GCTGCAGTTACTTTAGGTAC+TGG | 0.500181 | 3_4:-10152379 | Msa0489590:CDS |
| ATGGGCTGGTACTCCGAATG+AGG | 0.500266 | 3_4:-10152602 | Msa0489590:CDS |
| GCTTGAATAGCCTTTACCGT+TGG | 0.500425 | 3_4:+10152400 | None:intergenic |
| AGAATACTACTCAATACAAT+GGG | 0.501975 | 3_4:-10146838 | Msa0489590:three_prime_UTR |
| CAATCTCTGCAAACGAAGCC+AGG | 0.502178 | 3_4:+10152573 | None:intergenic |
| GCCGGAGTTAATGGCGGTGG+CGG | 0.506433 | 3_4:-10154511 | Msa0489590:CDS |
| TGGTAATTGCTTAACGCCCC+TGG | 0.508454 | 3_4:+10147696 | None:intergenic |
| GTTTCCTCTGTTTGTACTCG+AGG | 0.510022 | 3_4:-10147802 | Msa0489590:CDS |
| CAATGGATTCTCATTAATGA+TGG | 0.511491 | 3_4:-10152305 | Msa0489590:CDS |
| GCTCCTAAACCACCTATGGC+AGG | 0.513781 | 3_4:+10149801 | None:intergenic |
| CTCCGGTTACAGGTATCAAA+AGG | 0.516383 | 3_4:+10152530 | None:intergenic |
| AACTGAAGCCAATATAATCA+TGG | 0.517487 | 3_4:+10150819 | None:intergenic |
| AATATTGGATCAAATAAAGC+AGG | 0.518607 | 3_4:-10152473 | Msa0489590:CDS |
| TATTGCCACAGCTCTTTGCA+AGG | 0.519958 | 3_4:-10149646 | Msa0489590:CDS |
| AAAATAGCACTTGTTGCAGC+TGG | 0.520530 | 3_4:-10152265 | Msa0489590:CDS |
| ACCTGTAACCGGAGGAGTCA+TGG | 0.521632 | 3_4:-10152521 | Msa0489590:CDS |
| ATATCCTGGAATATTATACT+GGG | 0.526329 | 3_4:-10149760 | Msa0489590:CDS |
| TGGCTTCTAACTCAATTAGC+AGG | 0.529356 | 3_4:-10149678 | Msa0489590:CDS |
| AACTCAATTAGCAGGTGCTA+AGG | 0.529397 | 3_4:-10149670 | Msa0489590:CDS |
| GCAGATTTCAACTCGTACTC+GGG | 0.532249 | 3_4:+10150742 | None:intergenic |
| TAGAGAGTTGATGGAGGCCA+GGG | 0.533353 | 3_4:-10147713 | Msa0489590:CDS |
| TTTGATAATCTAACTTTCTG+TGG | 0.537945 | 3_4:+10147160 | None:intergenic |
| ACCGCCACCGCCATTAACTC+CGG | 0.538050 | 3_4:+10154510 | None:intergenic |
| GCGGTGGCGGTGGAGGTAGT+GGG | 0.539408 | 3_4:-10154498 | Msa0489590:CDS |
| TAGGAAGGCCAAATTTCTCC+TGG | 0.539754 | 3_4:+10149835 | None:intergenic |
| AGGAATCTATCCAACGGTAA+AGG | 0.540393 | 3_4:-10152410 | Msa0489590:CDS |
| GCCATAGTTCGTCATAATGA+AGG | 0.541299 | 3_4:+10147617 | None:intergenic |
| TTAACTTGTGCAGGTTGGAA+TGG | 0.542954 | 3_4:-10149176 | Msa0489590:intron |
| TGTTGCTGCTTTCAATAAAG+GGG | 0.543037 | 3_4:-10154221 | Msa0489590:intron |
| TGTCACTGAGGGAACCCAAA+TGG | 0.544172 | 3_4:+10148831 | None:intergenic |
| CACGGATCGGAACACATCGC+CGG | 0.548171 | 3_4:-10154529 | Msa0489590:CDS |
| TTAATGATTGGTGCTGCAGT+TGG | 0.548394 | 3_4:-10149588 | Msa0489590:CDS |
| ATCGCCGGAGTTAATGGCGG+TGG | 0.548582 | 3_4:-10154514 | Msa0489590:CDS |
| CAGAATACTACTCAATACAA+TGG | 0.548634 | 3_4:-10146839 | Msa0489590:three_prime_UTR |
| CAAATAATGAAGATGATGAT+GGG | 0.550654 | 3_4:-10148744 | Msa0489590:CDS |
| ATTTGATGAATTTAACAACT+GGG | 0.555779 | 3_4:-10154680 | Msa0489590:five_prime_UTR |
| ATTGCCACAGCTCTTTGCAA+GGG | 0.555909 | 3_4:-10149645 | Msa0489590:CDS |
| AAGGGCTCTGGGCTTGTAGG+TGG | 0.557216 | 3_4:-10149627 | Msa0489590:CDS |
| ACAACCCCAGGCTTATGCTC+TGG | 0.559697 | 3_4:-10149499 | Msa0489590:intron |
| TCCGAATACTAATTTGGCCA+CGG | 0.561548 | 3_4:-10147737 | Msa0489590:CDS |
| CATGCCAACCATGACTCCTC+CGG | 0.562534 | 3_4:+10152513 | None:intergenic |
| GTAGTCTGCCCTGCCATAGG+TGG | 0.563738 | 3_4:-10149810 | Msa0489590:CDS |
| TACGAGTTGAAATCTGCTGC+TGG | 0.570488 | 3_4:-10150736 | Msa0489590:intron |
| CTCCATCAACTCTCTAGCCG+TGG | 0.573432 | 3_4:+10147720 | None:intergenic |
| GTTCCCTCAGTGACAAATCA+GGG | 0.580531 | 3_4:-10148823 | Msa0489590:CDS |
| CTCAGTGACAAATCAGGGGA+AGG | 0.581546 | 3_4:-10148818 | Msa0489590:CDS |
| GCTTACCAGAGCATAAGCCT+GGG | 0.582753 | 3_4:+10149494 | None:intergenic |
| GTCAAAACCTTGTCTTTGAG+GGG | 0.583643 | 3_4:+10152441 | None:intergenic |
| TTATCAAATAACCACTCTTG+TGG | 0.594290 | 3_4:+10146987 | None:intergenic |
| GTCATGGTTGGCATGATGTG+TGG | 0.594764 | 3_4:-10152505 | Msa0489590:CDS |
| AGAGCCCTTGCAAAGAGCTG+TGG | 0.596197 | 3_4:+10149641 | None:intergenic |
| AGTTATTCCCCTCAAAGACA+AGG | 0.598527 | 3_4:-10152448 | Msa0489590:CDS |
| GAATGTCACTGTCGACATTG+AGG | 0.601703 | 3_4:-10149240 | Msa0489590:CDS |
| ATACTGGGGTTTCACAAATG+TGG | 0.606217 | 3_4:-10149745 | Msa0489590:CDS |
| TGGGCTGGTACTCCGAATGA+GGG | 0.609332 | 3_4:-10152601 | Msa0489590:CDS |
| GGAGAATTCTCTGCACGAAG+AGG | 0.611903 | 3_4:+10150856 | None:intergenic |
| GGAGACCAGTGGCAAGACCA+AGG | 0.612140 | 3_4:+10154245 | None:intergenic |
| CTCCTAAACCACCTATGGCA+GGG | 0.612594 | 3_4:+10149802 | None:intergenic |
| AGAAGTAGAACTGAAGTCAA+AGG | 0.614115 | 3_4:+10149124 | None:intergenic |
| GAACGAGACATTGAAGCTCA+CGG | 0.614125 | 3_4:-10154547 | Msa0489590:CDS |
| TCGCTATTGAAACTGTGCTG+AGG | 0.616198 | 3_4:-10150879 | Msa0489590:CDS |
| CTTTATTGAAAGCAGCAACA+AGG | 0.617678 | 3_4:+10154224 | None:intergenic |
| AATGAAGATGATGATGGGAA+TGG | 0.618213 | 3_4:-10148739 | Msa0489590:CDS |
| CATTTACTACATACATCCAA+AGG | 0.622009 | 3_4:+10148069 | None:intergenic |
| ATGGCAGGGCAGACTACAGT+AGG | 0.622344 | 3_4:+10149816 | None:intergenic |
| CATGTCGAAATACTATCTGA+AGG | 0.623321 | 3_4:-10148262 | Msa0489590:CDS |
| CAGCCAGCAAAACTGTGTGC+TGG | 0.629332 | 3_4:-10148193 | Msa0489590:CDS |
| AGACATTGAAGCTCACGGAT+CGG | 0.631337 | 3_4:-10154542 | Msa0489590:CDS |
| GGTAAAAGAAATTTGGCGAG+AGG | 0.632782 | 3_4:-10148781 | Msa0489590:CDS |
| ATCATGGCAGTTGTAAATGG+AGG | 0.633666 | 3_4:+10150835 | None:intergenic |
| AGCTATCGTGGACGAGCACG+TGG | 0.634226 | 3_4:-10147775 | Msa0489590:CDS |
| GCTGTGTGGCGTTGTAAGCG+TGG | 0.636334 | 3_4:-10149904 | Msa0489590:CDS |
| ACTCGAGGAATGAGCTATCG+TGG | 0.638496 | 3_4:-10147787 | Msa0489590:CDS |
| AGCAACAAAGCCCATTCAGG+AGG | 0.640278 | 3_4:+10154280 | None:intergenic |
| TGTAATACATGAATGGGTAT+GGG | 0.640519 | 3_4:-10152620 | Msa0489590:CDS |
| CAGGGCAGACTACAGTAGGA+AGG | 0.640537 | 3_4:+10149820 | None:intergenic |
| GTGGAAGTCACAATAGAGAG+AGG | 0.645325 | 3_4:-10147660 | Msa0489590:CDS |
| AGAGAGTTGATGGAGGCCAG+GGG | 0.648802 | 3_4:-10147712 | Msa0489590:CDS |
| CTTCAGATAGTATTTCGACA+TGG | 0.649097 | 3_4:+10148263 | None:intergenic |
| CTTCCCCTGATTTGTCACTG+AGG | 0.650403 | 3_4:+10148819 | None:intergenic |
| ATACATGAATGGGTATGGGC+TGG | 0.650440 | 3_4:-10152616 | Msa0489590:CDS |
| ACTGTATCAAATGTCTTACA+GGG | 0.656078 | 3_4:-10150787 | Msa0489590:CDS |
| GTAACCGGAGGAGTCATGGT+TGG | 0.664027 | 3_4:-10152517 | Msa0489590:CDS |
| CTTCTGATGAACCTAGAAGA+CGG | 0.665644 | 3_4:+10154575 | None:intergenic |
| GACTTTCCGATGTCAACACT+AGG | 0.669720 | 3_4:+10152334 | None:intergenic |
| TTCCCTCAGTGACAAATCAG+GGG | 0.672221 | 3_4:-10148822 | Msa0489590:CDS |
| GCAGCACCAATCATTAAACT+CGG | 0.674844 | 3_4:+10149594 | None:intergenic |
| CTTACCAGAGCATAAGCCTG+GGG | 0.679204 | 3_4:+10149495 | None:intergenic |
| AGCAGCAACAAGGAGACCAG+TGG | 0.683119 | 3_4:+10154234 | None:intergenic |
| GAAGGTCCTAGTGTTGACAT+CGG | 0.683955 | 3_4:-10152340 | Msa0489590:CDS |
| CAAGACCAAGGAGACAACCA+AGG | 0.688884 | 3_4:+10154257 | None:intergenic |
| GGGAAGGAGAGTGATCCACC+TGG | 0.688942 | 3_4:-10148802 | Msa0489590:CDS |
| CACGGCTAGAGAGTTGATGG+AGG | 0.691369 | 3_4:-10147719 | Msa0489590:CDS |
| TACAATGGGAAAGAGAAACA+GGG | 0.699247 | 3_4:-10146824 | Msa0489590:three_prime_UTR |
| ACTTGCAGGAATCTATCCAA+CGG | 0.700362 | 3_4:-10152416 | Msa0489590:CDS |
| TATCCTGGAATATTATACTG+GGG | 0.700995 | 3_4:-10149759 | Msa0489590:CDS |
| CACATCGCCGGAGTTAATGG+CGG | 0.705098 | 3_4:-10154517 | Msa0489590:CDS |
| TTACCAGTAGTTAAACGCGG+TGG | 0.708980 | 3_4:-10147679 | Msa0489590:CDS |
| CAATTACCAGTAGTTAAACG+CGG | 0.710350 | 3_4:-10147682 | Msa0489590:CDS |
| CATTCCTCGAGTACAAACAG+AGG | 0.725332 | 3_4:+10147798 | None:intergenic |
| CTGATATTAGGAATGCTGTG+TGG | 0.784835 | 3_4:-10149918 | Msa0489590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTATAAAAAAAATT+GGG | + | chr3_4:10150361-10150380 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTATAAAAAAAAT+TGG | + | chr3_4:10150362-10150381 | None:intergenic | 0.0% |
| !! | AAAAAAAAATGAGAATTTAA+TGG | - | chr3_4:10150373-10150392 | Msa0489590:intron | 10.0% |
| !! | AAAAAAAATGAGAATTTAAT+GGG | - | chr3_4:10150374-10150393 | Msa0489590:intron | 10.0% |
| !! | ATTTCACAAATAAAATAAAA+AGG | + | chr3_4:10151113-10151132 | None:intergenic | 10.0% |
| !!! | AATATTTTCAACTTATATAT+TGG | - | chr3_4:10152846-10152865 | Msa0489590:intron | 10.0% |
| !!! | ATTAGAATTTGAAATTCTAA+TGG | + | chr3_4:10146956-10146975 | None:intergenic | 15.0% |
| !! | TCGATAATAATTTGAAAAAA+CGG | - | chr3_4:10147947-10147966 | Msa0489590:intron | 15.0% |
| !!! | ATTGTTTTTCAAATTATTAC+CGG | + | chr3_4:10148400-10148419 | None:intergenic | 15.0% |
| !! | TGACATATATTCTAATATTA+TGG | - | chr3_4:10149552-10149571 | Msa0489590:CDS | 15.0% |
| !! | ATATTATGGTCATTTAATTA+AGG | - | chr3_4:10149566-10149585 | Msa0489590:CDS | 15.0% |
| !! | TAGACATAAAATAATCTAAT+GGG | + | chr3_4:10149688-10149707 | None:intergenic | 15.0% |
| !! | ATAAATTTAGCTAAAACTTA+AGG | + | chr3_4:10150297-10150316 | None:intergenic | 15.0% |
| !! | AAAAGCTCTATAAATAAATA+AGG | + | chr3_4:10150536-10150555 | None:intergenic | 15.0% |
| !! | TAAAATAAAAAGGATGAAAA+AGG | + | chr3_4:10151103-10151122 | None:intergenic | 15.0% |
| !!! | AATATTACTAATTTTGGTAT+TGG | + | chr3_4:10151390-10151409 | None:intergenic | 15.0% |
| !!! | CTTCTTAATATTACTAATTT+TGG | + | chr3_4:10151396-10151415 | None:intergenic | 15.0% |
| !! | ATTAGTAATATTAAGAAGAA+TGG | - | chr3_4:10151398-10151417 | Msa0489590:intron | 15.0% |
| !! | CAAGTTCTATAAATAATAAT+TGG | + | chr3_4:10153789-10153808 | None:intergenic | 15.0% |
| !! | ATTGTCATTAATTTAATCTT+AGG | - | chr3_4:10153811-10153830 | Msa0489590:intron | 15.0% |
| !!! | ATTCATATTCAATATTTTAC+AGG | - | chr3_4:10153890-10153909 | Msa0489590:intron | 15.0% |
| !! | AGATTAAGTATTAGATTTAA+GGG | + | chr3_4:10154153-10154172 | None:intergenic | 15.0% |
| !! | TAGATTAAGTATTAGATTTA+AGG | + | chr3_4:10154154-10154173 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTTAAGCATGTA+AGG | - | chr3_4:10154377-10154396 | Msa0489590:CDS | 15.0% |
| !! | AATGTGAAGATTGAAAAAAA+GGG | + | chr3_4:10146987-10147006 | None:intergenic | 20.0% |
| !! | AATTTGATGAATTTAACAAC+TGG | - | chr3_4:10147048-10147067 | Msa0489590:three_prime_UTR | 20.0% |
| !! | ATTTGATGAATTTAACAACT+GGG | - | chr3_4:10147049-10147068 | Msa0489590:three_prime_UTR | 20.0% |
| !!! | TGAGAATGTTTTGTTTTTTT+TGG | - | chr3_4:10147550-10147569 | Msa0489590:intron | 20.0% |
| !! | ACAAAACTATAAATGAGATA+TGG | + | chr3_4:10148063-10148082 | None:intergenic | 20.0% |
| !! | GGTAATAATTTGAAAAACAA+TGG | - | chr3_4:10148399-10148418 | Msa0489590:intron | 20.0% |
| !! | ACTTTGCATGATTTATTAAT+AGG | - | chr3_4:10149015-10149034 | Msa0489590:intron | 20.0% |
| !! | ATTGACTATATAAGATTAGT+AGG | + | chr3_4:10149072-10149091 | None:intergenic | 20.0% |
| !! | CTAGACATAAAATAATCTAA+TGG | + | chr3_4:10149689-10149708 | None:intergenic | 20.0% |
| !!! | CATTAGATTATTTTATGTCT+AGG | - | chr3_4:10149687-10149706 | Msa0489590:CDS | 20.0% |
| !! | TTTCTAAATGTGATATTGTT+AGG | - | chr3_4:10149742-10149761 | Msa0489590:CDS | 20.0% |
| !! | TTCTAAATGTGATATTGTTA+GGG | - | chr3_4:10149743-10149762 | Msa0489590:CDS | 20.0% |
| !!! | TTTAATTTTAGTATCATGCT+TGG | + | chr3_4:10150084-10150103 | None:intergenic | 20.0% |
| !! | AATTCACTTAAATAGTTAGT+TGG | + | chr3_4:10150189-10150208 | None:intergenic | 20.0% |
| !! | TTGCTTAAAATTTAATGTAG+AGG | - | chr3_4:10150431-10150450 | Msa0489590:intron | 20.0% |
| !! | TGCTTAAAATTTAATGTAGA+GGG | - | chr3_4:10150432-10150451 | Msa0489590:intron | 20.0% |
| !! | TTCATAGTATTAATCAACAT+TGG | + | chr3_4:10150592-10150611 | None:intergenic | 20.0% |
| !! | TTTGAATAATTCATACAACA+TGG | - | chr3_4:10151581-10151600 | Msa0489590:intron | 20.0% |
| !! | TAATATTCCAGGATATTTAA+GGG | + | chr3_4:10151965-10151984 | None:intergenic | 20.0% |
| !! | ATAATATTCCAGGATATTTA+AGG | + | chr3_4:10151966-10151985 | None:intergenic | 20.0% |
| !!! | AATTTTCAACCTATTTGTTA+CGG | - | chr3_4:10154203-10154222 | Msa0489590:intron | 20.0% |
| !! | AATATACAAGAAGTGATATA+TGG | + | chr3_4:10154716-10154735 | None:intergenic | 20.0% |
| !! | ATATTCGTTTGCATAATTTA+GGG | - | chr3_4:10154834-10154853 | Msa0489590:five_prime_UTR | 20.0% |
| ! | ATGAGAATATAGTGTTTGTT+GGG | + | chr3_4:10146918-10146937 | None:intergenic | 25.0% |
| ! | AATGAGAATATAGTGTTTGT+TGG | + | chr3_4:10146919-10146938 | None:intergenic | 25.0% |
| ! | ATGTGAAGATTGAAAAAAAG+GGG | + | chr3_4:10146986-10147005 | None:intergenic | 25.0% |
| ! | GAATGTGAAGATTGAAAAAA+AGG | + | chr3_4:10146988-10147007 | None:intergenic | 25.0% |
| ! | AATTGAAGCGATTTCATTAA+TGG | - | chr3_4:10147078-10147097 | Msa0489590:three_prime_UTR | 25.0% |
| ! | ATTGAAGCGATTTCATTAAT+GGG | - | chr3_4:10147079-10147098 | Msa0489590:three_prime_UTR | 25.0% |
| !! | AAAATTAAGTTTTCCAATGC+CGG | - | chr3_4:10147118-10147137 | Msa0489590:exon | 25.0% |
| ! | AGAGATATGTTGAAATTATC+AGG | - | chr3_4:10147269-10147288 | Msa0489590:intron | 25.0% |
| ! | CTTCATTTATTTGATTCTTC+TGG | - | chr3_4:10147404-10147423 | Msa0489590:intron | 25.0% |
| ! | TGTTTGAATGATGATCTTAA+TGG | - | chr3_4:10147646-10147665 | Msa0489590:CDS | 25.0% |
| !!! | AATGTTGAATTTTAGAAGTC+AGG | - | chr3_4:10148722-10148741 | Msa0489590:CDS | 25.0% |
| ! | TTCCTTCGATTAATAAAAAG+TGG | - | chr3_4:10148753-10148772 | Msa0489590:CDS | 25.0% |
| ! | TCCTTCGATTAATAAAAAGT+GGG | - | chr3_4:10148754-10148773 | Msa0489590:CDS | 25.0% |
| ! | GCATGATTTATTAATAGGAA+TGG | - | chr3_4:10149020-10149039 | Msa0489590:intron | 25.0% |
| !! | TATAGTCAATTTTCTCATCT+AGG | - | chr3_4:10149082-10149101 | Msa0489590:CDS | 25.0% |
| ! | AATATTGGATCAAATAAAGC+AGG | - | chr3_4:10149256-10149275 | Msa0489590:CDS | 25.0% |
| !! | TTGTTTATGTTTGAGTTTCT+TGG | - | chr3_4:10149766-10149785 | Msa0489590:CDS | 25.0% |
| !! | ATTTGAAGATGGGAAATTTT+AGG | + | chr3_4:10150251-10150270 | None:intergenic | 25.0% |
| ! | AAAAAAATTGGGGTTTATGA+TGG | + | chr3_4:10150350-10150369 | None:intergenic | 25.0% |
| !! | TTGTGTTTCCTTTCTAATTT+TGG | - | chr3_4:10150721-10150740 | Msa0489590:intron | 25.0% |
| !! | TTTTGTGGATTTCTAAATGT+TGG | - | chr3_4:10150766-10150785 | Msa0489590:CDS | 25.0% |
| !!! | ACTTTTAAGACTCAAGATTT+AGG | - | chr3_4:10151195-10151214 | Msa0489590:intron | 25.0% |
| ! | ATTGTGCAATTTCAATTCTT+TGG | + | chr3_4:10151236-10151255 | None:intergenic | 25.0% |
| ! | AATATCCTGGAATATTATAC+TGG | - | chr3_4:10151968-10151987 | Msa0489590:intron | 25.0% |
| ! | ATATCCTGGAATATTATACT+GGG | - | chr3_4:10151969-10151988 | Msa0489590:intron | 25.0% |
| ! | ATAGTTGTTTGTTCAAATTC+TGG | - | chr3_4:10152308-10152327 | Msa0489590:CDS | 25.0% |
| !!! | AAAGTTAATTTAACTTGTGC+AGG | - | chr3_4:10152544-10152563 | Msa0489590:CDS | 25.0% |
| !!! | ATTTTATTGATTACCATGAG+AGG | + | chr3_4:10152665-10152684 | None:intergenic | 25.0% |
| ! | ATATATTGGCAAAATTTCTC+AGG | - | chr3_4:10152860-10152879 | Msa0489590:intron | 25.0% |
| ! | TATATTGGCAAAATTTCTCA+GGG | - | chr3_4:10152861-10152880 | Msa0489590:intron | 25.0% |
| ! | TCAAATAATGAAGATGATGA+TGG | - | chr3_4:10152984-10153003 | Msa0489590:intron | 25.0% |
| ! | CAAATAATGAAGATGATGAT+GGG | - | chr3_4:10152985-10153004 | Msa0489590:intron | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+AGG | - | chr3_4:10153308-10153327 | Msa0489590:intron | 25.0% |
| ! | ATTGAGAAATTAGGTATGTT+TGG | + | chr3_4:10153416-10153435 | None:intergenic | 25.0% |
| ! | AACAATGACATTGAGAAATT+AGG | + | chr3_4:10153425-10153444 | None:intergenic | 25.0% |
| ! | CTTGAAATATATAAAGACCA+GGG | + | chr3_4:10153687-10153706 | None:intergenic | 25.0% |
| ! | TCTTGAAATATATAAAGACC+AGG | + | chr3_4:10153688-10153707 | None:intergenic | 25.0% |
| ! | TGACAGAAAAAAATGATGAA+AGG | - | chr3_4:10153747-10153766 | Msa0489590:intron | 25.0% |
| ! | TGAAAAAACTGACAGTTAAA+AGG | + | chr3_4:10153860-10153879 | None:intergenic | 25.0% |
| ! | TTGTTATCCGAATACTAATT+TGG | - | chr3_4:10153986-10154005 | Msa0489590:intron | 25.0% |
| !! | CAAATAGGTTGAAAATTTCA+AGG | + | chr3_4:10154200-10154219 | None:intergenic | 25.0% |
| ! | AGATGAAAAACTCTTAAAAG+TGG | + | chr3_4:10154247-10154266 | None:intergenic | 25.0% |
| !! | TCCATTCATATTACTGTTTT+TGG | - | chr3_4:10154487-10154506 | Msa0489590:CDS | 25.0% |
| !!! | CCATTCATATTACTGTTTTT+GGG | - | chr3_4:10154488-10154507 | Msa0489590:CDS | 25.0% |
| ! | TGATATTTATGTTAATGTGC+AGG | - | chr3_4:10154535-10154554 | Msa0489590:CDS | 25.0% |
| !! | TTTGATAATCTAACTTTCTG+TGG | + | chr3_4:10154572-10154591 | None:intergenic | 25.0% |
| ! | ACAGAAAACAATTTGACAAA+TGG | - | chr3_4:10154597-10154616 | Msa0489590:CDS | 25.0% |
| ! | CAGAAAACAATTTGACAAAT+GGG | - | chr3_4:10154598-10154617 | Msa0489590:CDS | 25.0% |
| !!! | ACTCACTATTTCTTTTGTAA+GGG | + | chr3_4:10154651-10154670 | None:intergenic | 25.0% |
| !!! | AACTCACTATTTCTTTTGTA+AGG | + | chr3_4:10154652-10154671 | None:intergenic | 25.0% |
| ! | AAATTATGCAAACGAATATG+AGG | + | chr3_4:10154833-10154852 | None:intergenic | 25.0% |
| ! | CATATTCGTTTGCATAATTT+AGG | - | chr3_4:10154833-10154852 | Msa0489590:five_prime_UTR | 25.0% |
| ! | AGAATACTACTCAATACAAT+GGG | - | chr3_4:10154891-10154910 | Msa0489590:five_prime_UTR | 25.0% |
| TGTGAAGATTGAAAAAAAGG+GGG | + | chr3_4:10146985-10147004 | None:intergenic | 30.0% | |
| !! | TTGTTGCTGCTTTCAATAAA+GGG | - | chr3_4:10147507-10147526 | Msa0489590:intron | 30.0% |
| ! | GAATGATGATCTTAATGGAT+AGG | - | chr3_4:10147651-10147670 | Msa0489590:CDS | 30.0% |
| ! | CAACAACATCTCTGTTTTAT+GGG | - | chr3_4:10148158-10148177 | Msa0489590:CDS | 30.0% |
| ATGTTGATCTCAATGGATAT+AGG | - | chr3_4:10148260-10148279 | Msa0489590:CDS | 30.0% | |
| ATATAGGAGAAAAGCAAACT+AGG | - | chr3_4:10148276-10148295 | Msa0489590:CDS | 30.0% | |
| GCAATTACATTTCTGATTAG+AGG | + | chr3_4:10148476-10148495 | None:intergenic | 30.0% | |
| TCAAATTCACAGACTTCAAA+CGG | + | chr3_4:10148515-10148534 | None:intergenic | 30.0% | |
| !! | AAAACAGAAACGTTGTTTCT+TGG | + | chr3_4:10148592-10148611 | None:intergenic | 30.0% |
| ! | AGAAACAACGTTTCTGTTTT+TGG | - | chr3_4:10148592-10148611 | Msa0489590:intron | 30.0% |
| !! | GAAACAACGTTTCTGTTTTT+GGG | - | chr3_4:10148593-10148612 | Msa0489590:intron | 30.0% |
| !!! | AAACAACGTTTCTGTTTTTG+GGG | - | chr3_4:10148594-10148613 | Msa0489590:intron | 30.0% |
| CCTTCGATTAATAAAAAGTG+GGG | - | chr3_4:10148755-10148774 | Msa0489590:CDS | 30.0% | |
| CTTCGATTAATAAAAAGTGG+GGG | - | chr3_4:10148756-10148775 | Msa0489590:CDS | 30.0% | |
| !! | TAGTTAGCTTTGATACTGTT+TGG | - | chr3_4:10148879-10148898 | Msa0489590:intron | 30.0% |
| AGTATGATACACTAGATCTT+TGG | - | chr3_4:10148985-10149004 | Msa0489590:intron | 30.0% | |
| ATGTAATACATGAATGGGTA+TGG | - | chr3_4:10149108-10149127 | Msa0489590:CDS | 30.0% | |
| TGTAATACATGAATGGGTAT+GGG | - | chr3_4:10149109-10149128 | Msa0489590:CDS | 30.0% | |
| GTGTGGTTTACTAGAAATAT+TGG | - | chr3_4:10149241-10149260 | Msa0489590:CDS | 30.0% | |
| CATCATTAATGAGAATCCAT+TGG | + | chr3_4:10149426-10149445 | None:intergenic | 30.0% | |
| ! | CAATGGATTCTCATTAATGA+TGG | - | chr3_4:10149424-10149443 | Msa0489590:intron | 30.0% |
| !!! | TTAGGGTTTGGAGATTTTTT+AGG | - | chr3_4:10149825-10149844 | Msa0489590:CDS | 30.0% |
| !!! | TAGGGTTTGGAGATTTTTTA+GGG | - | chr3_4:10149826-10149845 | Msa0489590:CDS | 30.0% |
| TAGGGTCTATAATTGAGAAT+TGG | - | chr3_4:10149844-10149863 | Msa0489590:CDS | 30.0% | |
| !! | AGTTTTATAGGGTTTGAGTT+AGG | + | chr3_4:10149888-10149907 | None:intergenic | 30.0% |
| !! | CCTTGCATATCAGTTTTATA+GGG | + | chr3_4:10149899-10149918 | None:intergenic | 30.0% |
| !! | ACCTTGCATATCAGTTTTAT+AGG | + | chr3_4:10149900-10149919 | None:intergenic | 30.0% |
| ! | AAGCTTTATAAGCACTACTT+GGG | - | chr3_4:10149931-10149950 | Msa0489590:CDS | 30.0% |
| !! | AATTCCTAATTGTGCCATTT+GGG | + | chr3_4:10150049-10150068 | None:intergenic | 30.0% |
| ! | TAATTCCTAATTGTGCCATT+TGG | + | chr3_4:10150050-10150069 | None:intergenic | 30.0% |
| AATGGCACAATTAGGAATTA+AGG | - | chr3_4:10150050-10150069 | Msa0489590:intron | 30.0% | |
| TCACTTAAATAGTTAGTTGG+TGG | + | chr3_4:10150186-10150205 | None:intergenic | 30.0% | |
| GTAAAGTGATATATACCTAG+AGG | - | chr3_4:10150218-10150237 | Msa0489590:intron | 30.0% | |
| !! | ATTTTAGGAAAATCACCTCT+AGG | + | chr3_4:10150236-10150255 | None:intergenic | 30.0% |
| !! | AATGAGAATTTAATGGGTTC+AGG | - | chr3_4:10150380-10150399 | Msa0489590:intron | 30.0% |
| !!! | CATTTTTAGTCTCTCTAGTT+TGG | + | chr3_4:10150505-10150524 | None:intergenic | 30.0% |
| !! | AGCATCTTTTGCTATATAGA+AGG | - | chr3_4:10150564-10150583 | Msa0489590:intron | 30.0% |
| !!! | TTTCTAATTTTGGCTGGTTT+CGG | - | chr3_4:10150731-10150750 | Msa0489590:intron | 30.0% |
| ! | CTATGCATTTTTCTTTCTTC+AGG | - | chr3_4:10150798-10150817 | Msa0489590:CDS | 30.0% |
| ATAATCATGGCAGTTGTAAA+TGG | + | chr3_4:10150900-10150919 | None:intergenic | 30.0% | |
| TACAACTGCCATGATTATAT+TGG | - | chr3_4:10150902-10150921 | Msa0489590:CDS | 30.0% | |
| AACTGAAGCCAATATAATCA+TGG | + | chr3_4:10150913-10150932 | None:intergenic | 30.0% | |
| AACTGTATCAAATGTCTTAC+AGG | - | chr3_4:10150941-10150960 | Msa0489590:intron | 30.0% | |
| ACTGTATCAAATGTCTTACA+GGG | - | chr3_4:10150942-10150961 | Msa0489590:intron | 30.0% | |
| !!! | ATTGCTACACTTTTTGAGTA+TGG | - | chr3_4:10151030-10151049 | Msa0489590:intron | 30.0% |
| GTGATAACAATACTGTAAGA+CGG | + | chr3_4:10151152-10151171 | None:intergenic | 30.0% | |
| AATTGAAATTGCACAATCCA+GGG | - | chr3_4:10151239-10151258 | Msa0489590:intron | 30.0% | |
| !! | TAGGAAGTAGGTTTGTTAAA+TGG | - | chr3_4:10151306-10151325 | Msa0489590:intron | 30.0% |
| AAAAGGGACAAATAAATGTG+AGG | + | chr3_4:10151440-10151459 | None:intergenic | 30.0% | |
| ! | TCACATTTATTTGTCCCTTT+TGG | - | chr3_4:10151439-10151458 | Msa0489590:intron | 30.0% |
| ! | CACATTTATTTGTCCCTTTT+GGG | - | chr3_4:10151440-10151459 | Msa0489590:intron | 30.0% |
| TTAAAAGAGTTCCAGGAAAA+GGG | - | chr3_4:10151490-10151509 | Msa0489590:intron | 30.0% | |
| ! | GTATCTCTTTTATCTTCGTA+TGG | + | chr3_4:10151620-10151639 | None:intergenic | 30.0% |
| CTAATTAACGATTTACCTCT+AGG | - | chr3_4:10151684-10151703 | Msa0489590:intron | 30.0% | |
| TATGAACATACAATACCTAG+AGG | + | chr3_4:10151702-10151721 | None:intergenic | 30.0% | |
| ! | TCTAGGTATTGTATGTTCAT+AGG | - | chr3_4:10151701-10151720 | Msa0489590:intron | 30.0% |
| CTGGATATAGTCAAAAAACT+TGG | + | chr3_4:10151878-10151897 | None:intergenic | 30.0% | |
| !!! | CAAGTTTTTTGACTATATCC+AGG | - | chr3_4:10151876-10151895 | Msa0489590:intron | 30.0% |
| TATCCTGGAATATTATACTG+GGG | - | chr3_4:10151970-10151989 | Msa0489590:intron | 30.0% | |
| TACAAAGTGTAGTTCAATAG+TGG | + | chr3_4:10152363-10152382 | None:intergenic | 30.0% | |
| !! | TTAATTTAACTTGTGCAGGT+TGG | - | chr3_4:10152548-10152567 | Msa0489590:CDS | 30.0% |
| !! | TGCTATTTCATATGAATGAC+AGG | - | chr3_4:10152734-10152753 | Msa0489590:intron | 30.0% |
| ATATTGGCAAAATTTCTCAG+GGG | - | chr3_4:10152862-10152881 | Msa0489590:intron | 30.0% | |
| AATCGATGAAGAACTATTTC+TGG | - | chr3_4:10153055-10153074 | Msa0489590:intron | 30.0% | |
| !! | ACTATTTCTGGACAAACTTA+AGG | - | chr3_4:10153067-10153086 | Msa0489590:intron | 30.0% |
| ! | ACGAAGATGATTTTCTTGAT+GGG | - | chr3_4:10153565-10153584 | Msa0489590:intron | 30.0% |
| CATTTACTACATACATCCAA+AGG | + | chr3_4:10153663-10153682 | None:intergenic | 30.0% | |
| TTAAAAGAGCCGTAACAAAT+AGG | + | chr3_4:10154215-10154234 | None:intergenic | 30.0% | |
| CCCAAAAACAGTAATATGAA+TGG | + | chr3_4:10154491-10154510 | None:intergenic | 30.0% | |
| ATTAACTCTTGATTCAAGCT+TGG | - | chr3_4:10154622-10154641 | Msa0489590:five_prime_UTR | 30.0% | |
| !!! | ATATTTTAATGCCACAAGAG+TGG | - | chr3_4:10154731-10154750 | Msa0489590:five_prime_UTR | 30.0% |
| TTATCAAATAACCACTCTTG+TGG | + | chr3_4:10154745-10154764 | None:intergenic | 30.0% | |
| ACAAGAGTGGTTATTTGATA+AGG | - | chr3_4:10154744-10154763 | Msa0489590:five_prime_UTR | 30.0% | |
| !! | TCATTGATTCTTAACGTGTT+GGG | + | chr3_4:10154795-10154814 | None:intergenic | 30.0% |
| !! | ATCATTGATTCTTAACGTGT+TGG | + | chr3_4:10154796-10154815 | None:intergenic | 30.0% |
| CAGAATACTACTCAATACAA+TGG | - | chr3_4:10154890-10154909 | Msa0489590:five_prime_UTR | 30.0% | |
| CTTTATTGAAAGCAGCAACA+AGG | + | chr3_4:10147508-10147527 | None:intergenic | 35.0% | |
| !! | CTTGTTGCTGCTTTCAATAA+AGG | - | chr3_4:10147506-10147525 | Msa0489590:intron | 35.0% |
| !! | TGTTGCTGCTTTCAATAAAG+GGG | - | chr3_4:10147508-10147527 | Msa0489590:intron | 35.0% |
| ! | TGATGATCTTAATGGATAGG+AGG | - | chr3_4:10147654-10147673 | Msa0489590:CDS | 35.0% |
| GTTAGTTACACTCAATGATC+TGG | - | chr3_4:10147698-10147717 | Msa0489590:CDS | 35.0% | |
| ATCTATGAAGCTTCAAGCAT+AGG | - | chr3_4:10147721-10147740 | Msa0489590:CDS | 35.0% | |
| CTATGTGTTAGTGTCATATC+CGG | + | chr3_4:10147755-10147774 | None:intergenic | 35.0% | |
| TGACACTAACACATAGACAT+CGG | - | chr3_4:10147759-10147778 | Msa0489590:CDS | 35.0% | |
| GTTTCTGAATGTGATCTCAA+TGG | - | chr3_4:10147801-10147820 | Msa0489590:CDS | 35.0% | |
| GGAAATGAGCAAAACAAACT+AGG | - | chr3_4:10147822-10147841 | Msa0489590:intron | 35.0% | |
| GAGCAAAACAAACTAGGATA+TGG | - | chr3_4:10147828-10147847 | Msa0489590:intron | 35.0% | |
| ACAAACTAGGATATGGTGAT+AGG | - | chr3_4:10147835-10147854 | Msa0489590:intron | 35.0% | |
| GTTCAACACCAACACAAAAT+TGG | + | chr3_4:10147998-10148017 | None:intergenic | 35.0% | |
| !! | TTTGTGTTGGTGTTGAACAT+CGG | - | chr3_4:10148000-10148019 | Msa0489590:intron | 35.0% |
| !! | AGATGTTGTTGCTTGGATTT+TGG | + | chr3_4:10148149-10148168 | None:intergenic | 35.0% |
| AAAACAGAGATGTTGTTGCT+TGG | + | chr3_4:10148156-10148175 | None:intergenic | 35.0% | |
| ! | GCAACAACATCTCTGTTTTA+TGG | - | chr3_4:10148157-10148176 | Msa0489590:CDS | 35.0% |
| TGTCTGAATGTTGATCTCAA+TGG | - | chr3_4:10148253-10148272 | Msa0489590:CDS | 35.0% | |
| GACACTAGATACATAAACAC+CGG | - | chr3_4:10148378-10148397 | Msa0489590:intron | 35.0% | |
| TACATTTCTGATTAGAGGCA+TGG | + | chr3_4:10148471-10148490 | None:intergenic | 35.0% | |
| CAAATTCACAGACTTCAAAC+GGG | + | chr3_4:10148514-10148533 | None:intergenic | 35.0% | |
| !!! | AACAACGTTTCTGTTTTTGG+GGG | - | chr3_4:10148595-10148614 | Msa0489590:intron | 35.0% |
| !! | GTTGAATTTTAGAAGTCAGG+AGG | - | chr3_4:10148725-10148744 | Msa0489590:CDS | 35.0% |
| !! | AATTTTAGAAGTCAGGAGGA+AGG | - | chr3_4:10148729-10148748 | Msa0489590:CDS | 35.0% |
| !!! | CCCCACTTTTTATTAATCGA+AGG | + | chr3_4:10148758-10148777 | None:intergenic | 35.0% |
| AAGCTAACTACAAGTCACAA+AGG | + | chr3_4:10148869-10148888 | None:intergenic | 35.0% | |
| CGTTTGCAATATAGACAGAA+TGG | + | chr3_4:10148956-10148975 | None:intergenic | 35.0% | |
| AGGTGCATGTAATACATGAA+TGG | - | chr3_4:10149102-10149121 | Msa0489590:CDS | 35.0% | |
| GGTGCATGTAATACATGAAT+GGG | - | chr3_4:10149103-10149122 | Msa0489590:CDS | 35.0% | |
| ! | ATCCTTTTGATACCTGTAAC+CGG | - | chr3_4:10149197-10149216 | Msa0489590:intron | 35.0% |
| AGTCAAAACCTTGTCTTTGA+GGG | + | chr3_4:10149292-10149311 | None:intergenic | 35.0% | |
| AAGTCAAAACCTTGTCTTTG+AGG | + | chr3_4:10149293-10149312 | None:intergenic | 35.0% | |
| ! | ATTCAAGCTGCAGTTACTTT+AGG | - | chr3_4:10149344-10149363 | Msa0489590:intron | 35.0% |
| ! | TGTTTGAGTTTCTTGGTTAC+CGG | - | chr3_4:10149773-10149792 | Msa0489590:CDS | 35.0% |
| CTATCGTAGTTTGACTGTTA+GGG | - | chr3_4:10149808-10149827 | Msa0489590:CDS | 35.0% | |
| GGTCTATAATTGAGAATTGG+CGG | - | chr3_4:10149847-10149866 | Msa0489590:CDS | 35.0% | |
| ! | ATTGAGAATTGGCGGTTTTA+TGG | - | chr3_4:10149855-10149874 | Msa0489590:CDS | 35.0% |
| !! | AATTGGCGGTTTTATGGTTT+GGG | - | chr3_4:10149861-10149880 | Msa0489590:CDS | 35.0% |
| CCCTATAAAACTGATATGCA+AGG | - | chr3_4:10149896-10149915 | Msa0489590:CDS | 35.0% | |
| ! | CAAGCTTTATAAGCACTACT+TGG | - | chr3_4:10149930-10149949 | Msa0489590:CDS | 35.0% |
| TTCATTCTGTTAGGTATCAG+AGG | + | chr3_4:10149993-10150012 | None:intergenic | 35.0% | |
| ! | TTTAGAGCAGATGTGATTTG+AGG | + | chr3_4:10150144-10150163 | None:intergenic | 35.0% |
| TTAATGTAGAGGGACTTCAT+TGG | - | chr3_4:10150442-10150461 | Msa0489590:intron | 35.0% | |
| ATCTGTGAAAATTGAGTCCA+TGG | - | chr3_4:10150645-10150664 | Msa0489590:intron | 35.0% | |
| !! | GTTTCCTTTCTAATTTTGGC+TGG | - | chr3_4:10150725-10150744 | Msa0489590:intron | 35.0% |
| GAAACCAGCCAAAATTAGAA+AGG | + | chr3_4:10150732-10150751 | None:intergenic | 35.0% | |
| !!! | ACACTTTTTGAGTATGGTTC+AGG | - | chr3_4:10151036-10151055 | Msa0489590:intron | 35.0% |
| GAATTGAAATTGCACAATCC+AGG | - | chr3_4:10151238-10151257 | Msa0489590:intron | 35.0% | |
| !! | ATAGACATGCTTTAGGAAGT+AGG | - | chr3_4:10151294-10151313 | Msa0489590:intron | 35.0% |
| TCAGACTTCTATAAGATCTG+CGG | - | chr3_4:10151361-10151380 | Msa0489590:intron | 35.0% | |
| GAACATGTTAAAAGAGTTCC+AGG | - | chr3_4:10151483-10151502 | Msa0489590:intron | 35.0% | |
| GTTAAAAGAGTTCCAGGAAA+AGG | - | chr3_4:10151489-10151508 | Msa0489590:intron | 35.0% | |
| TAAAAGAGTTCCAGGAAAAG+GGG | - | chr3_4:10151491-10151510 | Msa0489590:intron | 35.0% | |
| ! | AATTATTCAACCCCTTTTCC+TGG | + | chr3_4:10151504-10151523 | None:intergenic | 35.0% |
| GTATCTTCGAAGAGAGTTAT+AGG | - | chr3_4:10151524-10151543 | Msa0489590:intron | 35.0% | |
| TCGAAGAGAGTTATAGGAAA+AGG | - | chr3_4:10151530-10151549 | Msa0489590:intron | 35.0% | |
| ATACAACATGGAAACTGTGT+GGG | - | chr3_4:10151593-10151612 | Msa0489590:intron | 35.0% | |
| TTGAATACTCAGATGTCGAT+TGG | - | chr3_4:10151648-10151667 | Msa0489590:intron | 35.0% | |
| ! | TGAATACTCAGATGTCGATT+GGG | - | chr3_4:10151649-10151668 | Msa0489590:intron | 35.0% |
| ! | AGGTATTGTATGTTCATAGG+AGG | - | chr3_4:10151704-10151723 | Msa0489590:intron | 35.0% |
| GACTATATCCAGGAGAAATT+TGG | - | chr3_4:10151886-10151905 | Msa0489590:intron | 35.0% | |
| ATCATTGCCCTTAAATATCC+TGG | - | chr3_4:10151955-10151974 | Msa0489590:intron | 35.0% | |
| AAACCCCAGTATAATATTCC+AGG | + | chr3_4:10151976-10151995 | None:intergenic | 35.0% | |
| GTTATCAATTCAGCAATTCC+TGG | - | chr3_4:10152192-10152211 | Msa0489590:intron | 35.0% | |
| AGAAGTAGAACTGAAGTCAA+AGG | + | chr3_4:10152608-10152627 | None:intergenic | 35.0% | |
| CATATGAAATAGCAGAACAG+TGG | + | chr3_4:10152728-10152747 | None:intergenic | 35.0% | |
| TAACAAAATGAGTCCTGACA+TGG | - | chr3_4:10152759-10152778 | Msa0489590:intron | 35.0% | |
| GATAACCATCAATCACACAA+TGG | + | chr3_4:10152787-10152806 | None:intergenic | 35.0% | |
| TATTGGCAAAATTTCTCAGG+GGG | - | chr3_4:10152863-10152882 | Msa0489590:intron | 35.0% | |
| TCCACCTGGTAAAAGAAATT+TGG | - | chr3_4:10152941-10152960 | Msa0489590:intron | 35.0% | |
| !! | AATGAAGATGATGATGGGAA+TGG | - | chr3_4:10152990-10153009 | Msa0489590:intron | 35.0% |
| !! | TTCATCGATTTCTTCAAGCT+CGG | + | chr3_4:10153045-10153064 | None:intergenic | 35.0% |
| GCAGTCTTAACAACAAAAGA+TGG | + | chr3_4:10153136-10153155 | None:intergenic | 35.0% | |
| AGCTTATGCAGATAGCTAAT+AGG | + | chr3_4:10153269-10153288 | None:intergenic | 35.0% | |
| AAGCTCAAGTGAGTGTATTT+GGG | + | chr3_4:10153363-10153382 | None:intergenic | 35.0% | |
| TAAGCTCAAGTGAGTGTATT+TGG | + | chr3_4:10153364-10153383 | None:intergenic | 35.0% | |
| CTTCAGATAGTATTTCGACA+TGG | + | chr3_4:10153469-10153488 | None:intergenic | 35.0% | |
| CATGTCGAAATACTATCTGA+AGG | - | chr3_4:10153467-10153486 | Msa0489590:intron | 35.0% | |
| ! | TCTTTGAGAGTTACAGATGA+TGG | + | chr3_4:10153495-10153514 | None:intergenic | 35.0% |
| ! | GACGAAGATGATTTTCTTGA+TGG | - | chr3_4:10153564-10153583 | Msa0489590:intron | 35.0% |
| CTTGATGGGATATTGACATA+TGG | - | chr3_4:10153579-10153598 | Msa0489590:intron | 35.0% | |
| TGACATATGGTGACATTAGA+AGG | - | chr3_4:10153592-10153611 | Msa0489590:intron | 35.0% | |
| AGAAGTCTCATTAGACTTCT+CGG | + | chr3_4:10153625-10153644 | None:intergenic | 35.0% | |
| ATGTATGTAGTAAATGTCCC+TGG | - | chr3_4:10153667-10153686 | Msa0489590:intron | 35.0% | |
| CAATTACCAGTAGTTAAACG+CGG | - | chr3_4:10154047-10154066 | Msa0489590:intron | 35.0% | |
| TCCTTCATTATGACGAACTA+TGG | - | chr3_4:10154111-10154130 | Msa0489590:intron | 35.0% | |
| TGAAAATTTCAAGGAGATGC+AGG | + | chr3_4:10154191-10154210 | None:intergenic | 35.0% | |
| AACACTGCTTCTATTGTACT+CGG | + | chr3_4:10154331-10154350 | None:intergenic | 35.0% | |
| GGAAAGAATTATGCTCAGTT+TGG | + | chr3_4:10154470-10154489 | None:intergenic | 35.0% | |
| GAGTAGTATTCTGCTTCTTA+TGG | + | chr3_4:10154883-10154902 | None:intergenic | 35.0% | |
| ATACAATGGGAAAGAGAAAC+AGG | - | chr3_4:10154904-10154923 | Msa0489590:five_prime_UTR | 35.0% | |
| TACAATGGGAAAGAGAAACA+GGG | - | chr3_4:10154905-10154924 | Msa0489590:five_prime_UTR | 35.0% | |
| CTTCTGATGAACCTAGAAGA+CGG | + | chr3_4:10147157-10147176 | None:intergenic | 40.0% | |
| !! | CTTAATGGATAGGAGGTGTT+AGG | - | chr3_4:10147661-10147680 | Msa0489590:CDS | 40.0% |
| CTTGTGACTTAAGAGGTCAT+AGG | - | chr3_4:10148122-10148141 | Msa0489590:CDS | 40.0% | |
| GCAAACTAGGATACAGTGTT+AGG | - | chr3_4:10148289-10148308 | Msa0489590:intron | 40.0% | |
| ! | CAAACACACATTGACGGATA+TGG | + | chr3_4:10148441-10148460 | None:intergenic | 40.0% |
| ! | TGGTGTCAAACACACATTGA+CGG | + | chr3_4:10148447-10148466 | None:intergenic | 40.0% |
| TCACAAGCAGCATGAATACA+TGG | + | chr3_4:10148545-10148564 | None:intergenic | 40.0% | |
| CTTGTGACTTAAGAGGTAAC+AGG | - | chr3_4:10148558-10148577 | Msa0489590:intron | 40.0% | |
| ! | CCTAAAGTACTACACGAAGA+GGG | + | chr3_4:10148683-10148702 | None:intergenic | 40.0% |
| ! | TCCTAAAGTACTACACGAAG+AGG | + | chr3_4:10148684-10148703 | None:intergenic | 40.0% |
| CGATTAATAAAAAGTGGGGG+TGG | - | chr3_4:10148759-10148778 | Msa0489590:CDS | 40.0% | |
| AATAAAAAGTGGGGGTGGTT+TGG | - | chr3_4:10148764-10148783 | Msa0489590:CDS | 40.0% | |
| TACATAAAAGCCAGACGAAG+AGG | + | chr3_4:10148914-10148933 | None:intergenic | 40.0% | |
| AGTTATTCCCCTCAAAGACA+AGG | - | chr3_4:10149281-10149300 | Msa0489590:CDS | 40.0% | |
| GTCAAAACCTTGTCTTTGAG+GGG | + | chr3_4:10149291-10149310 | None:intergenic | 40.0% | |
| !!! | CAAGGTTTTGACTTACTTGC+AGG | - | chr3_4:10149299-10149318 | Msa0489590:intron | 40.0% |
| ACTTGCAGGAATCTATCCAA+CGG | - | chr3_4:10149313-10149332 | Msa0489590:intron | 40.0% | |
| AGGAATCTATCCAACGGTAA+AGG | - | chr3_4:10149319-10149338 | Msa0489590:intron | 40.0% | |
| !! | TTTAGGTACTGGCTGTTCAT+TGG | - | chr3_4:10149361-10149380 | Msa0489590:intron | 40.0% |
| !! | TTAGGTACTGGCTGTTCATT+GGG | - | chr3_4:10149362-10149381 | Msa0489590:intron | 40.0% |
| ! | AAAATAGCACTTGTTGCAGC+TGG | - | chr3_4:10149464-10149483 | Msa0489590:intron | 40.0% |
| TTGAGTTTGTACTCACGCAA+GGG | - | chr3_4:10149646-10149665 | Msa0489590:CDS | 40.0% | |
| TGTCTAGGCATTCATTGAGA+AGG | - | chr3_4:10149702-10149721 | Msa0489590:CDS | 40.0% | |
| GTCTAGGCATTCATTGAGAA+GGG | - | chr3_4:10149703-10149722 | Msa0489590:CDS | 40.0% | |
| ACGATAGCATTGCATCAATC+CGG | + | chr3_4:10149795-10149814 | None:intergenic | 40.0% | |
| GCTATCGTAGTTTGACTGTT+AGG | - | chr3_4:10149807-10149826 | Msa0489590:CDS | 40.0% | |
| GTAGTTTGACTGTTAGGGTT+TGG | - | chr3_4:10149813-10149832 | Msa0489590:CDS | 40.0% | |
| !! | GAATTGGCGGTTTTATGGTT+TGG | - | chr3_4:10149860-10149879 | Msa0489590:CDS | 40.0% |
| !! | ATTGGCGGTTTTATGGTTTG+GGG | - | chr3_4:10149862-10149881 | Msa0489590:CDS | 40.0% |
| TCTGTTAGGTATCAGAGGAT+GGG | + | chr3_4:10149988-10150007 | None:intergenic | 40.0% | |
| TTCTGTTAGGTATCAGAGGA+TGG | + | chr3_4:10149989-10150008 | None:intergenic | 40.0% | |
| GTGGTTGCAAATTGCAATGA+AGG | - | chr3_4:10150020-10150039 | Msa0489590:intron | 40.0% | |
| GGCACAATTAGGAATTAAGG+AGG | - | chr3_4:10150053-10150072 | Msa0489590:intron | 40.0% | |
| ! | GTGGTGAGACTTTAAGCTTT+TGG | + | chr3_4:10150167-10150186 | None:intergenic | 40.0% |
| TTAAGGATTCTGCAAGATGC+GGG | + | chr3_4:10150280-10150299 | None:intergenic | 40.0% | |
| CTTAAGGATTCTGCAAGATG+CGG | + | chr3_4:10150281-10150300 | None:intergenic | 40.0% | |
| ! | CTCTCTAGTTTGGACAAAGA+GGG | + | chr3_4:10150495-10150514 | None:intergenic | 40.0% |
| ! | TCTCTCTAGTTTGGACAAAG+AGG | + | chr3_4:10150496-10150515 | None:intergenic | 40.0% |
| GCTTGGAAGTAAAATGTCCA+TGG | + | chr3_4:10150665-10150684 | None:intergenic | 40.0% | |
| ! | GACATTTTACTTCCAAGCTC+TGG | - | chr3_4:10150667-10150686 | Msa0489590:intron | 40.0% |
| ATCATGGCAGTTGTAAATGG+AGG | + | chr3_4:10150897-10150916 | None:intergenic | 40.0% | |
| AGCAGATTTCAACTCGTACT+CGG | + | chr3_4:10150991-10151010 | None:intergenic | 40.0% | |
| GCATGCTATAGACATGCTTT+AGG | - | chr3_4:10151287-10151306 | Msa0489590:intron | 40.0% | |
| CAGAACATAGCATCCCAAAA+GGG | + | chr3_4:10151456-10151475 | None:intergenic | 40.0% | |
| ACAGAACATAGCATCCCAAA+AGG | + | chr3_4:10151457-10151476 | None:intergenic | 40.0% | |
| GGATGCTATGTTCTGTATCT+TGG | - | chr3_4:10151461-10151480 | Msa0489590:intron | 40.0% | |
| CATACAACATGGAAACTGTG+TGG | - | chr3_4:10151592-10151611 | Msa0489590:intron | 40.0% | |
| CACACAGCATTCCTAATATC+AGG | + | chr3_4:10151813-10151832 | None:intergenic | 40.0% | |
| CTGATATTAGGAATGCTGTG+TGG | - | chr3_4:10151811-10151830 | Msa0489590:intron | 40.0% | |
| ATACTGGGGTTTCACAAATG+TGG | - | chr3_4:10151984-10152003 | Msa0489590:intron | 40.0% | |
| GTGGAAGAAATTCTACGTAC+TGG | - | chr3_4:10152003-10152022 | Msa0489590:intron | 40.0% | |
| TGAGTTAGAAGCCATATTCC+AGG | + | chr3_4:10152045-10152064 | None:intergenic | 40.0% | |
| TGGCTTCTAACTCAATTAGC+AGG | - | chr3_4:10152051-10152070 | Msa0489590:intron | 40.0% | |
| AACTCAATTAGCAGGTGCTA+AGG | - | chr3_4:10152059-10152078 | Msa0489590:intron | 40.0% | |
| TACGCACCGAGTTTAATGAT+TGG | - | chr3_4:10152129-10152148 | Msa0489590:intron | 40.0% | |
| GCAGCACCAATCATTAAACT+CGG | + | chr3_4:10152138-10152157 | None:intergenic | 40.0% | |
| !! | TTAATGATTGGTGCTGCAGT+TGG | - | chr3_4:10152141-10152160 | Msa0489590:intron | 40.0% |
| ATTGACGACACAATGCTTCA+CGG | + | chr3_4:10152273-10152292 | None:intergenic | 40.0% | |
| ACAGCAGTGTTGTCAAAAAG+TGG | + | chr3_4:10152451-10152470 | None:intergenic | 40.0% | |
| CTGTGAAGTATGTCAGTTGT+AGG | - | chr3_4:10152467-10152486 | Msa0489590:CDS | 40.0% | |
| !! | TTAACTTGTGCAGGTTGGAA+TGG | - | chr3_4:10152553-10152572 | Msa0489590:CDS | 40.0% |
| TAGAATACTGCTTCCTCTCA+TGG | - | chr3_4:10152649-10152668 | Msa0489590:intron | 40.0% | |
| TGGTTCCATTGTGTGATTGA+TGG | - | chr3_4:10152779-10152798 | Msa0489590:intron | 40.0% | |
| ! | GCCAAATTTCTTTTACCAGG+TGG | + | chr3_4:10152945-10152964 | None:intergenic | 40.0% |
| ! | CTCGCCAAATTTCTTTTACC+AGG | + | chr3_4:10152948-10152967 | None:intergenic | 40.0% |
| GGTAAAAGAAATTTGGCGAG+AGG | - | chr3_4:10152948-10152967 | Msa0489590:intron | 40.0% | |
| ! | GGTTTAGAACTCTGCATTGT+TGG | - | chr3_4:10153011-10153030 | Msa0489590:intron | 40.0% |
| GCTATCTGCATAAGCTATCT+CGG | - | chr3_4:10153273-10153292 | Msa0489590:intron | 40.0% | |
| AGTGTATTTGGGAGAGCTTA+TGG | + | chr3_4:10153352-10153371 | None:intergenic | 40.0% | |
| ATGTCATTGTTCCTCTTGTC+AGG | - | chr3_4:10153434-10153453 | Msa0489590:intron | 40.0% | |
| TCCGAATACTAATTTGGCCA+CGG | - | chr3_4:10153992-10154011 | Msa0489590:intron | 40.0% | |
| GCCATAGTTCGTCATAATGA+AGG | + | chr3_4:10154115-10154134 | None:intergenic | 40.0% | |
| !!! | TGTTTTTGGGCATCAACTCT+TGG | - | chr3_4:10154501-10154520 | Msa0489590:CDS | 40.0% |
| GATTCTTAACGTGTTGGGAT+TGG | + | chr3_4:10154790-10154809 | None:intergenic | 40.0% | |
| ! | GTTTGTTGGGATCACTTGCT+AGG | + | chr3_4:10146905-10146924 | None:intergenic | 45.0% |
| ! | AGTTGATCGTTTTCCGGCAT+TGG | + | chr3_4:10147134-10147153 | None:intergenic | 45.0% |
| !! | AGACGGAGTTGATCGTTTTC+CGG | + | chr3_4:10147140-10147159 | None:intergenic | 45.0% |
| AACGATCAACTCCGTCTTCT+AGG | - | chr3_4:10147143-10147162 | Msa0489590:CDS | 45.0% | |
| GAACGAGACATTGAAGCTCA+CGG | - | chr3_4:10147182-10147201 | Msa0489590:intron | 45.0% | |
| AGACATTGAAGCTCACGGAT+CGG | - | chr3_4:10147187-10147206 | Msa0489590:intron | 45.0% | |
| ! | TGATAGTGCACCTCCTGAAT+GGG | - | chr3_4:10147439-10147458 | Msa0489590:intron | 45.0% |
| TCAAGCATAGGCACAGATAC+CGG | - | chr3_4:10147733-10147752 | Msa0489590:CDS | 45.0% | |
| CAACACAAAATTGGCGCATG+TGG | + | chr3_4:10147989-10148008 | None:intergenic | 45.0% | |
| ! | CACATGCGCCAATTTTGTGT+TGG | - | chr3_4:10147987-10148006 | Msa0489590:intron | 45.0% |
| ! | CATGCTGCTTGTGACTTAAG+AGG | - | chr3_4:10148115-10148134 | Msa0489590:CDS | 45.0% |
| ! | TTTCTGATTAGAGGCATGGC+TGG | + | chr3_4:10148467-10148486 | None:intergenic | 45.0% |
| CACAGACTTCAAACGGGATA+TGG | + | chr3_4:10148508-10148527 | None:intergenic | 45.0% | |
| ! | CATGCTGCTTGTGACTTAAG+AGG | - | chr3_4:10148115-10148134 | Msa0489590:CDS | 45.0% |
| CCCTCTTCGTGTAGTACTTT+AGG | - | chr3_4:10148680-10148699 | Msa0489590:CDS | 45.0% | |
| ATACATGAATGGGTATGGGC+TGG | - | chr3_4:10149113-10149132 | Msa0489590:CDS | 45.0% | |
| TGGCTTCGTTTGCAGAGATT+GGG | - | chr3_4:10149158-10149177 | Msa0489590:CDS | 45.0% | |
| TGCAGAGATTGGGTGATACA+TGG | - | chr3_4:10149168-10149187 | Msa0489590:intron | 45.0% | |
| CTCCGGTTACAGGTATCAAA+AGG | + | chr3_4:10149202-10149221 | None:intergenic | 45.0% | |
| ! | CTTTTGATACCTGTAACCGG+AGG | - | chr3_4:10149200-10149219 | Msa0489590:intron | 45.0% |
| GCTTGAATAGCCTTTACCGT+TGG | + | chr3_4:10149332-10149351 | None:intergenic | 45.0% | |
| ! | GCTGCAGTTACTTTAGGTAC+TGG | - | chr3_4:10149350-10149369 | Msa0489590:intron | 45.0% |
| ATGTCAACACTAGGACCTTC+AGG | + | chr3_4:10149389-10149408 | None:intergenic | 45.0% | |
| !! | GAAGGTCCTAGTGTTGACAT+CGG | - | chr3_4:10149389-10149408 | Msa0489590:intron | 45.0% |
| GACTTTCCGATGTCAACACT+AGG | + | chr3_4:10149398-10149417 | None:intergenic | 45.0% | |
| ! | AATGCAGTGCAAGGCATCAA+AGG | + | chr3_4:10149594-10149613 | None:intergenic | 45.0% |
| ATGCTTGACAATGCAGTGCA+AGG | + | chr3_4:10149603-10149622 | None:intergenic | 45.0% | |
| TGCACTGCATTGTCAAGCAT+AGG | - | chr3_4:10149603-10149622 | Msa0489590:CDS | 45.0% | |
| GCACTGCATTGTCAAGCATA+GGG | - | chr3_4:10149604-10149623 | Msa0489590:CDS | 45.0% | |
| CATTGTCAAGCATAGGGCTT+GGG | - | chr3_4:10149610-10149629 | Msa0489590:CDS | 45.0% | |
| CTTGAGTTTGTACTCACGCA+AGG | - | chr3_4:10149645-10149664 | Msa0489590:CDS | 45.0% | |
| AACACTGCCTCGAGAAGATA+TGG | + | chr3_4:10149957-10149976 | None:intergenic | 45.0% | |
| ACCTAACAGAATGAACGAGC+TGG | - | chr3_4:10149998-10150017 | Msa0489590:intron | 45.0% | |
| ACCAGCTCGTTCATTCTGTT+AGG | + | chr3_4:10150002-10150021 | None:intergenic | 45.0% | |
| TAACAGAATGAACGAGCTGG+TGG | - | chr3_4:10150001-10150020 | Msa0489590:intron | 45.0% | |
| TGCAATGAAGGCAACCCAAA+TGG | - | chr3_4:10150032-10150051 | Msa0489590:intron | 45.0% | |
| GCAACCCAAATGGCACAATT+AGG | - | chr3_4:10150042-10150061 | Msa0489590:intron | 45.0% | |
| CGGGAGTAGCATTTGAAGAT+GGG | + | chr3_4:10150261-10150280 | None:intergenic | 45.0% | |
| GTTTGGACAAAGAGGGACTT+TGG | + | chr3_4:10150488-10150507 | None:intergenic | 45.0% | |
| TTAAGCTAGAAGCCAGAGCT+TGG | + | chr3_4:10150682-10150701 | None:intergenic | 45.0% | |
| !!! | TTTTGGCTGGTTTCGGAGTA+CGG | - | chr3_4:10150738-10150757 | Msa0489590:CDS | 45.0% |
| !!! | CGGAGTACGGGTTTATTTTG+TGG | - | chr3_4:10150751-10150770 | Msa0489590:CDS | 45.0% |
| TCGCTATTGAAACTGTGCTG+AGG | - | chr3_4:10150850-10150869 | Msa0489590:CDS | 45.0% | |
| ! | GGGCACTGTAAAAGCTGATT+GGG | + | chr3_4:10150970-10150989 | None:intergenic | 45.0% |
| GCAGATTTCAACTCGTACTC+GGG | + | chr3_4:10150990-10151009 | None:intergenic | 45.0% | |
| ! | TACGAGTTGAAATCTGCTGC+TGG | - | chr3_4:10150993-10151012 | Msa0489590:intron | 45.0% |
| GAAATTGCACAATCCAGGGA+TGG | - | chr3_4:10151243-10151262 | Msa0489590:intron | 45.0% | |
| CGAGATTACTATACCATCCC+TGG | + | chr3_4:10151259-10151278 | None:intergenic | 45.0% | |
| CAATGACTCGTTTGGTTGCT+TGG | - | chr3_4:10151848-10151867 | Msa0489590:intron | 45.0% | |
| TAGGAAGGCCAAATTTCTCC+TGG | + | chr3_4:10151897-10151916 | None:intergenic | 45.0% | |
| TATTGCCACAGCTCTTTGCA+AGG | - | chr3_4:10152083-10152102 | Msa0489590:intron | 45.0% | |
| ATTGCCACAGCTCTTTGCAA+GGG | - | chr3_4:10152084-10152103 | Msa0489590:intron | 45.0% | |
| TGCTTCACGGGTAGTAAAGT+TGG | + | chr3_4:10152260-10152279 | None:intergenic | 45.0% | |
| TTGACGACACAATGCTTCAC+GGG | + | chr3_4:10152272-10152291 | None:intergenic | 45.0% | |
| CACGTATCACAGAACAGTAG+TGG | - | chr3_4:10152389-10152408 | Msa0489590:CDS | 45.0% | |
| GAATGTCACTGTCGACATTG+AGG | - | chr3_4:10152489-10152508 | Msa0489590:CDS | 45.0% | |
| TGTCGACATTGAGGCTGATT+TGG | - | chr3_4:10152498-10152517 | Msa0489590:CDS | 45.0% | |
| TCACACAATGGAACCATGTC+AGG | + | chr3_4:10152775-10152794 | None:intergenic | 45.0% | |
| AAAATTTCTCAGGGGGCTGT+TGG | - | chr3_4:10152870-10152889 | Msa0489590:intron | 45.0% | |
| AAATTTCTCAGGGGGCTGTT+GGG | - | chr3_4:10152871-10152890 | Msa0489590:intron | 45.0% | |
| GTTCCCTCAGTGACAAATCA+GGG | - | chr3_4:10152906-10152925 | Msa0489590:intron | 45.0% | |
| TTCCCTCAGTGACAAATCAG+GGG | - | chr3_4:10152907-10152926 | Msa0489590:intron | 45.0% | |
| ! | TTCCCCTGATTTGTCACTGA+GGG | + | chr3_4:10152912-10152931 | None:intergenic | 45.0% |
| GAACTCTGCATTGTTGGAGA+TGG | - | chr3_4:10153017-10153036 | Msa0489590:intron | 45.0% | |
| GATGGAAGATGTCGAAGATC+AGG | + | chr3_4:10153118-10153137 | None:intergenic | 45.0% | |
| AAGCTATCTCGGAGAGCTAA+TGG | - | chr3_4:10153284-10153303 | Msa0489590:intron | 45.0% | |
| TTCCTCTTGTCAGGTTTCTC+AGG | - | chr3_4:10153443-10153462 | Msa0489590:intron | 45.0% | |
| TAAGAGCGACTCAGATCCTT+TGG | - | chr3_4:10153644-10153663 | Msa0489590:intron | 45.0% | |
| GTTTCCTCTGTTTGTACTCG+AGG | - | chr3_4:10153927-10153946 | Msa0489590:intron | 45.0% | |
| CATTCCTCGAGTACAAACAG+AGG | + | chr3_4:10153934-10153953 | None:intergenic | 45.0% | |
| GCCGTGGCCAAATTAGTATT+CGG | + | chr3_4:10153996-10154015 | None:intergenic | 45.0% | |
| TTACCAGTAGTTAAACGCGG+TGG | - | chr3_4:10154050-10154069 | Msa0489590:intron | 45.0% | |
| GTGGAAGTCACAATAGAGAG+AGG | - | chr3_4:10154069-10154088 | Msa0489590:intron | 45.0% | |
| GAGAGGAAGCGAAGAATTGT+CGG | - | chr3_4:10154086-10154105 | Msa0489590:intron | 45.0% | |
| AACGTGTTGGGATTGGAACT+TGG | + | chr3_4:10154783-10154802 | None:intergenic | 45.0% | |
| !!! | TTTTTTTATAAAAAAAATTG+GGG | + | chr3_4:10150360-10150379 | None:intergenic | 5.0% |
| GAACACATCGCCGGAGTTAA+TGG | - | chr3_4:10147209-10147228 | Msa0489590:intron | 50.0% | |
| !! | GAGGTAGTGGGAGTGGTAAA+GGG | - | chr3_4:10147243-10147262 | Msa0489590:intron | 50.0% |
| ! | CTGATAGTGCACCTCCTGAA+TGG | - | chr3_4:10147438-10147457 | Msa0489590:intron | 50.0% |
| AGCAACAAAGCCCATTCAGG+AGG | + | chr3_4:10147452-10147471 | None:intergenic | 50.0% | |
| AGGAGCAACAAAGCCCATTC+AGG | + | chr3_4:10147455-10147474 | None:intergenic | 50.0% | |
| !! | GAATGGGCTTTGTTGCTCCT+TGG | - | chr3_4:10147455-10147474 | Msa0489590:intron | 50.0% |
| TTGCTCCTTGGTTGTCTCCT+TGG | - | chr3_4:10147467-10147486 | Msa0489590:intron | 50.0% | |
| CAAGACCAAGGAGACAACCA+AGG | + | chr3_4:10147475-10147494 | None:intergenic | 50.0% | |
| ! | GCACTGACGCTTCTGATTGA+AGG | + | chr3_4:10148031-10148050 | None:intergenic | 50.0% |
| GTGTCTGTGTCTGTGCTTCA+TGG | + | chr3_4:10148363-10148382 | None:intergenic | 50.0% | |
| TACCCTCATCAGATTCCACC+CGG | - | chr3_4:10148634-10148653 | Msa0489590:intron | 50.0% | |
| ! | GCAGTTTTCTCCTCTTCGTC+TGG | - | chr3_4:10148901-10148920 | Msa0489590:intron | 50.0% |
| ACAGAATGGACACAGAGCAC+GGG | + | chr3_4:10148942-10148961 | None:intergenic | 50.0% | |
| GACAGAATGGACACAGAGCA+CGG | + | chr3_4:10148943-10148962 | None:intergenic | 50.0% | |
| CAATCTCTGCAAACGAAGCC+AGG | + | chr3_4:10149159-10149178 | None:intergenic | 50.0% | |
| CTGGCTTCGTTTGCAGAGAT+TGG | - | chr3_4:10149157-10149176 | Msa0489590:CDS | 50.0% | |
| GTCATGGTTGGCATGATGTG+TGG | - | chr3_4:10149224-10149243 | Msa0489590:intron | 50.0% | |
| GCAGCAGCTGGAATTTCTTC+AGG | - | chr3_4:10149488-10149507 | Msa0489590:intron | 50.0% | |
| GCATTGTCAAGCATAGGGCT+TGG | - | chr3_4:10149609-10149628 | Msa0489590:CDS | 50.0% | |
| GCGTGAGTACAAACTCAAGC+AGG | + | chr3_4:10149644-10149663 | None:intergenic | 50.0% | |
| AGTTTGTACTCACGCAAGGG+CGG | - | chr3_4:10149649-10149668 | Msa0489590:CDS | 50.0% | |
| ACTTGGGCCATATCTTCTCG+AGG | - | chr3_4:10149947-10149966 | Msa0489590:intron | 50.0% | |
| GCGGGAGTAGCATTTGAAGA+TGG | + | chr3_4:10150262-10150281 | None:intergenic | 50.0% | |
| !! | TTTGGCTGGTTTCGGAGTAC+GGG | - | chr3_4:10150739-10150758 | Msa0489590:CDS | 50.0% |
| GGAGAATTCTCTGCACGAAG+AGG | + | chr3_4:10150876-10150895 | None:intergenic | 50.0% | |
| ! | CGGGCACTGTAAAAGCTGAT+TGG | + | chr3_4:10150971-10150990 | None:intergenic | 50.0% |
| AAGCGTGGCAATGACTCGTT+TGG | - | chr3_4:10151840-10151859 | Msa0489590:intron | 50.0% | |
| CTCCTAAACCACCTATGGCA+GGG | + | chr3_4:10151930-10151949 | None:intergenic | 50.0% | |
| CCATAGGTGGTTTAGGAGCT+GGG | - | chr3_4:10151932-10151951 | Msa0489590:intron | 50.0% | |
| GTGCTTCTGCTCCTGGAATA+TGG | - | chr3_4:10152031-10152050 | Msa0489590:intron | 50.0% | |
| TGTGCAACAGCAGCATTTCC+AGG | + | chr3_4:10152213-10152232 | None:intergenic | 50.0% | |
| CTTACCAGAGCATAAGCCTG+GGG | + | chr3_4:10152237-10152256 | None:intergenic | 50.0% | |
| GCTTACCAGAGCATAAGCCT+GGG | + | chr3_4:10152238-10152257 | None:intergenic | 50.0% | |
| GTGTCGTCAATTGTAGCTCG+TGG | - | chr3_4:10152282-10152301 | Msa0489590:CDS | 50.0% | |
| TGTCACTGAGGGAACCCAAA+TGG | + | chr3_4:10152901-10152920 | None:intergenic | 50.0% | |
| GGTTCCCTCAGTGACAAATC+AGG | - | chr3_4:10152905-10152924 | Msa0489590:intron | 50.0% | |
| ! | CTTCCCCTGATTTGTCACTG+AGG | + | chr3_4:10152913-10152932 | None:intergenic | 50.0% |
| CTCAGTGACAAATCAGGGGA+AGG | - | chr3_4:10152911-10152930 | Msa0489590:intron | 50.0% | |
| GGAAGATGTCGAAGATCAGG+AGG | + | chr3_4:10153115-10153134 | None:intergenic | 50.0% | |
| ! | CTACCAGCACACAGTTTTGC+TGG | + | chr3_4:10153542-10153561 | None:intergenic | 50.0% |
| ACTCGAGGAATGAGCTATCG+TGG | - | chr3_4:10153942-10153961 | Msa0489590:intron | 50.0% | |
| !! | TAGAGAGTTGATGGAGGCCA+GGG | - | chr3_4:10154016-10154035 | Msa0489590:intron | 50.0% |
| TGGTAATTGCTTAACGCCCC+TGG | + | chr3_4:10154036-10154055 | None:intergenic | 50.0% | |
| CTTCCACCGCGTTTAACTAC+TGG | + | chr3_4:10154056-10154075 | None:intergenic | 50.0% | |
| ACGAACTATGGCACTGTCTC+AGG | - | chr3_4:10154123-10154142 | Msa0489590:intron | 50.0% | |
| CACATCGCCGGAGTTAATGG+CGG | - | chr3_4:10147212-10147231 | Msa0489590:intron | 55.0% | |
| !! | GGAGGTAGTGGGAGTGGTAA+AGG | - | chr3_4:10147242-10147261 | Msa0489590:intron | 55.0% |
| !! | TGTCTCCTTGGTCTTGCCAC+TGG | - | chr3_4:10147479-10147498 | Msa0489590:intron | 55.0% |
| AGCAGCAACAAGGAGACCAG+TGG | + | chr3_4:10147498-10147517 | None:intergenic | 55.0% | |
| !! | ATGGGCTGGTACTCCGAATG+AGG | - | chr3_4:10149127-10149146 | Msa0489590:CDS | 55.0% |
| !! | TGGGCTGGTACTCCGAATGA+GGG | - | chr3_4:10149128-10149147 | Msa0489590:CDS | 55.0% |
| ACCTGTAACCGGAGGAGTCA+TGG | - | chr3_4:10149208-10149227 | Msa0489590:intron | 55.0% | |
| ACCATGACTCCTCCGGTTAC+AGG | + | chr3_4:10149212-10149231 | None:intergenic | 55.0% | |
| GTAACCGGAGGAGTCATGGT+TGG | - | chr3_4:10149212-10149231 | Msa0489590:intron | 55.0% | |
| CATGCCAACCATGACTCCTC+CGG | + | chr3_4:10149219-10149238 | None:intergenic | 55.0% | |
| GGCTGTTCATTGGGTCCTGA+AGG | - | chr3_4:10149371-10149390 | Msa0489590:intron | 55.0% | |
| ATCGGAAAGTCGTGCGCCAA+TGG | - | chr3_4:10149407-10149426 | Msa0489590:intron | 55.0% | |
| GGCTTCAATGCAGCAGTTGC+AGG | - | chr3_4:10150819-10150838 | Msa0489590:CDS | 55.0% | |
| CAGGGCAGACTACAGTAGGA+AGG | + | chr3_4:10151912-10151931 | None:intergenic | 55.0% | |
| ATGGCAGGGCAGACTACAGT+AGG | + | chr3_4:10151916-10151935 | None:intergenic | 55.0% | |
| ACTGTAGTCTGCCCTGCCAT+AGG | - | chr3_4:10151916-10151935 | Msa0489590:intron | 55.0% | |
| TGCCCTGCCATAGGTGGTTT+AGG | - | chr3_4:10151925-10151944 | Msa0489590:intron | 55.0% | |
| GCTCCTAAACCACCTATGGC+AGG | + | chr3_4:10151931-10151950 | None:intergenic | 55.0% | |
| GCCATAGGTGGTTTAGGAGC+TGG | - | chr3_4:10151931-10151950 | Msa0489590:intron | 55.0% | |
| CCCAGCTCCTAAACCACCTA+TGG | + | chr3_4:10151935-10151954 | None:intergenic | 55.0% | |
| !! | GGAAAGAGTGCTTCTGCTCC+TGG | - | chr3_4:10152024-10152043 | Msa0489590:intron | 55.0% |
| AGAGCCCTTGCAAAGAGCTG+TGG | + | chr3_4:10152091-10152110 | None:intergenic | 55.0% | |
| ACAGCTCTTTGCAAGGGCTC+TGG | - | chr3_4:10152090-10152109 | Msa0489590:intron | 55.0% | |
| CAGCTCTTTGCAAGGGCTCT+GGG | - | chr3_4:10152091-10152110 | Msa0489590:intron | 55.0% | |
| !! | GCTGCAGTTGGTGCTGTGTT+TGG | - | chr3_4:10152153-10152172 | Msa0489590:intron | 55.0% |
| !! | GCAGTTGGTGCTGTGTTTGG+AGG | - | chr3_4:10152156-10152175 | Msa0489590:intron | 55.0% |
| ACAACCCCAGGCTTATGCTC+TGG | - | chr3_4:10152230-10152249 | Msa0489590:intron | 55.0% | |
| GGCTTACCAGAGCATAAGCC+TGG | + | chr3_4:10152239-10152258 | None:intergenic | 55.0% | |
| GGCCTGAGAAACCTGACAAG+AGG | + | chr3_4:10153448-10153467 | None:intergenic | 55.0% | |
| CAGCCAGCAAAACTGTGTGC+TGG | - | chr3_4:10153536-10153555 | Msa0489590:intron | 55.0% | |
| CTCCATCAACTCTCTAGCCG+TGG | + | chr3_4:10154012-10154031 | None:intergenic | 55.0% | |
| !! | CACGGCTAGAGAGTTGATGG+AGG | - | chr3_4:10154010-10154029 | Msa0489590:intron | 55.0% |
| !! | CTAGAGAGTTGATGGAGGCC+AGG | - | chr3_4:10154015-10154034 | Msa0489590:intron | 55.0% |
| !! | AGAGAGTTGATGGAGGCCAG+GGG | - | chr3_4:10154017-10154036 | Msa0489590:intron | 55.0% |
| CACGGATCGGAACACATCGC+CGG | - | chr3_4:10147200-10147219 | Msa0489590:intron | 60.0% | |
| ATCGCCGGAGTTAATGGCGG+TGG | - | chr3_4:10147215-10147234 | Msa0489590:intron | 60.0% | |
| ACCGCCACCGCCATTAACTC+CGG | + | chr3_4:10147222-10147241 | None:intergenic | 60.0% | |
| GGAGACCAGTGGCAAGACCA+AGG | + | chr3_4:10147487-10147506 | None:intergenic | 60.0% | |
| CGCCGGGTGGAATCTGATGA+GGG | + | chr3_4:10148639-10148658 | None:intergenic | 60.0% | |
| CCTCATCAGATTCCACCCGG+CGG | - | chr3_4:10148637-10148656 | Msa0489590:intron | 60.0% | |
| CAATGCACAAAGCCTCCGCC+GGG | + | chr3_4:10148655-10148674 | None:intergenic | 60.0% | |
| CCAATGCACAAAGCCTCCGC+CGG | + | chr3_4:10148656-10148675 | None:intergenic | 60.0% | |
| ! | CGGCGGAGGCTTTGTGCATT+GGG | - | chr3_4:10148654-10148673 | Msa0489590:intron | 60.0% |
| AGCCAGGCAGCACCCTCATT+CGG | + | chr3_4:10149143-10149162 | None:intergenic | 60.0% | |
| GCTGTGTGGCGTTGTAAGCG+TGG | - | chr3_4:10151825-10151844 | Msa0489590:intron | 60.0% | |
| GTAGTCTGCCCTGCCATAGG+TGG | - | chr3_4:10151919-10151938 | Msa0489590:intron | 60.0% | |
| !! | TGCAAGGGCTCTGGGCTTGT+AGG | - | chr3_4:10152099-10152118 | Msa0489590:intron | 60.0% |
| !! | AAGGGCTCTGGGCTTGTAGG+TGG | - | chr3_4:10152102-10152121 | Msa0489590:intron | 60.0% |
| TGCTGCTGTTGCACAACCCC+AGG | - | chr3_4:10152218-10152237 | Msa0489590:intron | 60.0% | |
| !! | GGCTGTTGGGCTGGCCATTT+GGG | - | chr3_4:10152884-10152903 | Msa0489590:intron | 60.0% |
| GGGAAGGAGAGTGATCCACC+TGG | - | chr3_4:10152927-10152946 | Msa0489590:intron | 60.0% | |
| AGCTATCGTGGACGAGCACG+TGG | - | chr3_4:10153954-10153973 | Msa0489590:intron | 60.0% | |
| GGCCACGGCTAGAGAGTTGA+TGG | - | chr3_4:10154007-10154026 | Msa0489590:intron | 60.0% | |
| GCCGGAGTTAATGGCGGTGG+CGG | - | chr3_4:10147218-10147237 | Msa0489590:intron | 65.0% | |
| ! | GGAGTTAATGGCGGTGGCGG+TGG | - | chr3_4:10147221-10147240 | Msa0489590:intron | 65.0% |
| ! | GTTAATGGCGGTGGCGGTGG+AGG | - | chr3_4:10147224-10147243 | Msa0489590:intron | 65.0% |
| CCGCCGGGTGGAATCTGATG+AGG | + | chr3_4:10148640-10148659 | None:intergenic | 65.0% | |
| CATCAGATTCCACCCGGCGG+AGG | - | chr3_4:10148640-10148659 | Msa0489590:intron | 65.0% | |
| ! | CCGGCGGAGGCTTTGTGCAT+TGG | - | chr3_4:10148653-10148672 | Msa0489590:intron | 65.0% |
| !! | CTCCGAATGAGGGTGCTGCC+TGG | - | chr3_4:10149138-10149157 | Msa0489590:CDS | 65.0% |
| GTTGCAGCTGGTGCAGCAGC+TGG | - | chr3_4:10149476-10149495 | Msa0489590:intron | 65.0% | |
| TTCTCAGGGGGCTGTTGGGC+TGG | - | chr3_4:10152875-10152894 | Msa0489590:intron | 65.0% | |
| !! | GGGCTGTTGGGCTGGCCATT+TGG | - | chr3_4:10152883-10152902 | Msa0489590:intron | 65.0% |
| ! | GCGGTGGCGGTGGAGGTAGT+GGG | - | chr3_4:10147231-10147250 | Msa0489590:intron | 70.0% |
| !! | GGCGGTGGAGGTAGTGGGAG+TGG | - | chr3_4:10147236-10147255 | Msa0489590:intron | 70.0% |
| TGCACAAAGCCTCCGCCGGG+TGG | + | chr3_4:10148652-10148671 | None:intergenic | 70.0% | |
| ! | GGCGGTGGCGGTGGAGGTAG+TGG | - | chr3_4:10147230-10147249 | Msa0489590:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 10146806 | 10154945 | 10146806 | ID=Msa0489590;Name=Msa0489590 |
| chr3_4 | mRNA | 10146806 | 10154945 | 10146806 | ID=Msa0489590-mRNA-1;Parent=Msa0489590;Name=Msa0489590-mRNA-1;_AED=0.08;_eAED=0.08;_QI=328|0.77|0.9|1|1|1|10|319|785 |
| chr3_4 | exon | 10146806 | 10147194 | 10146806 | ID=Msa0489590-mRNA-1:exon:3297;Parent=Msa0489590-mRNA-1 |
| chr3_4 | exon | 10147607 | 10147839 | 10147607 | ID=Msa0489590-mRNA-1:exon:3296;Parent=Msa0489590-mRNA-1 |
| chr3_4 | exon | 10148083 | 10148295 | 10148083 | ID=Msa0489590-mRNA-1:exon:3295;Parent=Msa0489590-mRNA-1 |
| chr3_4 | exon | 10148663 | 10148869 | 10148663 | ID=Msa0489590-mRNA-1:exon:3294;Parent=Msa0489590-mRNA-1 |
| chr3_4 | exon | 10149081 | 10149185 | 10149081 | ID=Msa0489590-mRNA-1:exon:3293;Parent=Msa0489590-mRNA-1 |
| chr3_4 | exon | 10149226 | 10149303 | 10149226 | ID=Msa0489590-mRNA-1:exon:3292;Parent=Msa0489590-mRNA-1 |
| chr3_4 | exon | 10149500 | 10149954 | 10149500 | ID=Msa0489590-mRNA-1:exon:3291;Parent=Msa0489590-mRNA-1 |
| chr3_4 | exon | 10150737 | 10150931 | 10150737 | ID=Msa0489590-mRNA-1:exon:3290;Parent=Msa0489590-mRNA-1 |
| chr3_4 | exon | 10152242 | 10152647 | 10152242 | ID=Msa0489590-mRNA-1:exon:3289;Parent=Msa0489590-mRNA-1 |
| chr3_4 | exon | 10154222 | 10154945 | 10154222 | ID=Msa0489590-mRNA-1:exon:3288;Parent=Msa0489590-mRNA-1 |
| chr3_4 | five_prime_UTR | 10154618 | 10154945 | 10154618 | ID=Msa0489590-mRNA-1:five_prime_utr;Parent=Msa0489590-mRNA-1 |
| chr3_4 | CDS | 10154222 | 10154617 | 10154222 | ID=Msa0489590-mRNA-1:cds;Parent=Msa0489590-mRNA-1 |
| chr3_4 | CDS | 10152242 | 10152647 | 10152242 | ID=Msa0489590-mRNA-1:cds;Parent=Msa0489590-mRNA-1 |
| chr3_4 | CDS | 10150737 | 10150931 | 10150737 | ID=Msa0489590-mRNA-1:cds;Parent=Msa0489590-mRNA-1 |
| chr3_4 | CDS | 10149500 | 10149954 | 10149500 | ID=Msa0489590-mRNA-1:cds;Parent=Msa0489590-mRNA-1 |
| chr3_4 | CDS | 10149226 | 10149303 | 10149226 | ID=Msa0489590-mRNA-1:cds;Parent=Msa0489590-mRNA-1 |
| chr3_4 | CDS | 10149081 | 10149185 | 10149081 | ID=Msa0489590-mRNA-1:cds;Parent=Msa0489590-mRNA-1 |
| chr3_4 | CDS | 10148663 | 10148869 | 10148663 | ID=Msa0489590-mRNA-1:cds;Parent=Msa0489590-mRNA-1 |
| chr3_4 | CDS | 10148083 | 10148295 | 10148083 | ID=Msa0489590-mRNA-1:cds;Parent=Msa0489590-mRNA-1 |
| chr3_4 | CDS | 10147607 | 10147839 | 10147607 | ID=Msa0489590-mRNA-1:cds;Parent=Msa0489590-mRNA-1 |
| chr3_4 | CDS | 10147125 | 10147194 | 10147125 | ID=Msa0489590-mRNA-1:cds;Parent=Msa0489590-mRNA-1 |
| chr3_4 | three_prime_UTR | 10146806 | 10147124 | 10146806 | ID=Msa0489590-mRNA-1:three_prime_utr;Parent=Msa0489590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
