AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0443470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0443470 MtrunA17_Chr3g0078271 94.774 574 4 1 3 576 157 704 0.0 1105
Msa0443470 MtrunA17_Chr8g0355141 74.403 586 108 11 3 576 209 764 0.0 850
Msa0443470 MtrunA17_Chr8g0368211 64.000 75 25 2 276 350 1 73 1.85e-22 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0443470 AT2G27100.1 63.889 540 173 10 48 576 192 720 0.0 648

Find 200 sgRNAs with CRISPR-Local

Find 474 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTAGCAATGTGATATTT+TGG 0.094846 3_3:-14227624 Msa0443470:intron
TCCAGTAACCTTCGCTTTAA+AGG 0.144365 3_3:+14225483 None:intergenic
GCCTTTAAAGCGAAGGTTAC+TGG 0.178081 3_3:-14225484 Msa0443470:CDS
CCGTGGCTTAACATCTATTA+AGG 0.179953 3_3:-14226471 Msa0443470:CDS
ATATCTTCTTGTATCCTTCT+AGG 0.180061 3_3:+14226626 None:intergenic
CGTAAGCTTGACAAGGAAAA+AGG 0.217997 3_3:-14226581 Msa0443470:CDS
ATCTGTTTCCTCCTCTGAAT+TGG 0.224196 3_3:+14226739 None:intergenic
ATGACAGTAACTTCTTCTTC+TGG 0.235175 3_3:+14224345 None:intergenic
AGCAAATTGAAATTATGATT+TGG 0.243868 3_3:+14223863 None:intergenic
TCTTCATGCCTTGCTCCTTC+TGG 0.255229 3_3:+14226332 None:intergenic
ATTCATGGTGTAGATTATTA+TGG 0.272200 3_3:-14226398 Msa0443470:CDS
AAGTTGCGATGCAGATGTTT+AGG 0.279432 3_3:-14225133 Msa0443470:CDS
CTCCTCTGAATTGGGCTCAC+TGG 0.296081 3_3:+14226748 None:intergenic
GCAAATTGAAATTATGATTT+GGG 0.305967 3_3:+14223864 None:intergenic
AATTATGTTGGCCTTGTATC+AGG 0.312900 3_3:-14223950 Msa0443470:three_prime_UTR
CTGGTTTGGCTCATTGAGAT+TGG 0.315755 3_3:-14224297 Msa0443470:three_prime_UTR
TGTAATCTAGTTGTAATAAT+GGG 0.326501 3_3:-14224225 Msa0443470:three_prime_UTR
TCTGTTTCCTCCTCTGAATT+GGG 0.330335 3_3:+14226740 None:intergenic
CTGTAATCTAGTTGTAATAA+TGG 0.330615 3_3:-14224226 Msa0443470:three_prime_UTR
ACATGGCAGGGGATCTAATA+AGG 0.335645 3_3:-14226696 Msa0443470:CDS
GAAAAGTATGGTTGGAAGTA+TGG 0.336039 3_3:-14226152 Msa0443470:CDS
ACTGGCTTGCTCTGATTTAG+TGG 0.341815 3_3:+14226766 None:intergenic
AGTTGCGATGCAGATGTTTA+GGG 0.344816 3_3:-14225132 Msa0443470:CDS
ACACACTTATAACATATCTT+TGG 0.344912 3_3:-14226424 Msa0443470:CDS
TTCTAATGTTACAACATCTA+TGG 0.354148 3_3:+14224179 None:intergenic
AACATCTATTAAGGGCTTAG+AGG 0.355957 3_3:-14226462 Msa0443470:CDS
AACATCTGCATCGCAACTTC+TGG 0.357957 3_3:+14225137 None:intergenic
CTCCTGGATGAATTGCTTAT+AGG 0.362268 3_3:+14227547 None:intergenic
GCTTGTAGGTTTCACTGGTT+TGG 0.363855 3_3:-14224311 Msa0443470:exon
GGAATTAACATCAAAATTGC+GGG 0.376005 3_3:-14226042 Msa0443470:CDS
ACATATCTTTGGCGGATTCA+TGG 0.376855 3_3:-14226413 Msa0443470:CDS
CTCCGCATCCGTCGGGGATC+AGG 0.378643 3_3:+14225008 None:intergenic
CATAGACTATCGGAGCTTGT+AGG 0.379735 3_3:-14224325 Msa0443470:exon
CCAGGTACAGGCATCAAAAC+TGG 0.382108 3_3:+14225282 None:intergenic
TTGTTCTGTCGCTCCTATCC+TGG 0.391046 3_3:+14225424 None:intergenic
ATTACTGTAAGTAAATTTGT+TGG 0.391234 3_3:+14227145 None:intergenic
CGATCCCACTTAGTGGGATA+AGG 0.392410 3_3:-14224023 Msa0443470:three_prime_UTR
TCAGGAATGACGATGCGTTC+TGG 0.403076 3_3:-14225083 Msa0443470:CDS
TGTTGTGGATAATCAAACTA+TGG 0.406352 3_3:-14223979 Msa0443470:three_prime_UTR
TCATGGGATGGCGAACTATC+AGG 0.408251 3_3:+14225390 None:intergenic
TGACAGTAACTTCTTCTTCT+GGG 0.410350 3_3:+14224346 None:intergenic
TTTATACCTATTCAGGCCTC+TGG 0.412686 3_3:-14225180 Msa0443470:intron
GTTAATTCCAACACAAGCTC+TGG 0.415960 3_3:+14226056 None:intergenic
GCCTGGATCCCTTGGAAGTA+AGG 0.418306 3_3:-14226244 Msa0443470:CDS
CACTTATAACATATCTTTGG+CGG 0.418530 3_3:-14226421 Msa0443470:CDS
AAAATTAGGGATGAAAAGTA+TGG 0.418748 3_3:-14226164 Msa0443470:CDS
CGTGGCTTAACATCTATTAA+GGG 0.420071 3_3:-14226470 Msa0443470:CDS
GCAGAGAAGGTTGGACAGCC+TGG 0.420227 3_3:-14226261 Msa0443470:CDS
TAAGTACCTCCGCATCCGTC+GGG 0.423656 3_3:+14225001 None:intergenic
AGAAGATATTCATCAGGTTC+AGG 0.424015 3_3:-14226612 Msa0443470:CDS
CTTAGAGGGTGTTGAGCTAC+TGG 0.424649 3_3:-14226447 Msa0443470:CDS
GGCGTTCCACCAGGAGCATC+AGG 0.425251 3_3:+14225889 None:intergenic
GAATGAAAATGCTCGACGTT+TGG 0.427952 3_3:-14226963 Msa0443470:CDS
AGCTAAGTCGGGGTCAGAAT+GGG 0.431013 3_3:-14226306 Msa0443470:CDS
CTTTGCAGTCCTTACTTCCA+AGG 0.431457 3_3:+14226235 None:intergenic
TGAAAGATGATCGTGGGAAT+CGG 0.435042 3_3:-14225452 Msa0443470:CDS
TCCTTACTTCCAAGGGATCC+AGG 0.438671 3_3:+14226243 None:intergenic
TGCGTTCTGGTCCTCACATA+GGG 0.441667 3_3:-14225070 Msa0443470:CDS
ACCTGAGATTGCTGCATGAC+AGG 0.446698 3_3:+14225868 None:intergenic
CTGTCAGTTCTGAACCTAGA+AGG 0.448137 3_3:-14226640 Msa0443470:CDS
GTATATCATCTTCAAGCTCC+TGG 0.449728 3_3:+14227531 None:intergenic
GGTTTCCCAACTGCCTCTCA+TGG 0.451422 3_3:+14225373 None:intergenic
GTTTGTGGATGTCAGTGACC+TGG 0.458850 3_3:-14223915 Msa0443470:three_prime_UTR
TCGGAGCTTGTAGGTTTCAC+TGG 0.460462 3_3:-14224316 Msa0443470:exon
GTTGGACAGCCTGGATCCCT+TGG 0.462251 3_3:-14226252 Msa0443470:CDS
CACTGACATCCACAAACAAT+AGG 0.463690 3_3:+14223921 None:intergenic
CAGCTAAGTCGGGGTCAGAA+TGG 0.467971 3_3:-14226307 Msa0443470:CDS
TTGATGCCTGTACCTGGTGC+CGG 0.468596 3_3:-14225276 Msa0443470:CDS
TGATGCCTGTACCTGGTGCC+GGG 0.471237 3_3:-14225275 Msa0443470:intron
CATGAAGAAACAGCTAAGTC+GGG 0.472186 3_3:-14226317 Msa0443470:CDS
GATAGGAGCGACAGAACAAA+TGG 0.472382 3_3:-14225420 Msa0443470:CDS
TATGATTTGTGCAGAAATCC+AGG 0.472977 3_3:-14226803 Msa0443470:intron
GCCTGTCATGCAGCAATCTC+AGG 0.476952 3_3:-14225869 Msa0443470:intron
GAACTGACAGGGTGAGCCTT+CGG 0.478155 3_3:+14226653 None:intergenic
CGATTTCTCTGCTGCTCCGA+AGG 0.478520 3_3:-14226669 Msa0443470:CDS
ATCGCAACTTCTGGTGGAGC+AGG 0.479254 3_3:+14225146 None:intergenic
TCTCACATGCCTAAAACCTT+TGG 0.481229 3_3:+14226355 None:intergenic
TCCCACGATCATCTTTCAAT+CGG 0.481981 3_3:+14225457 None:intergenic
GTGGATGCAGAGTTTAAACC+TGG 0.485312 3_3:+14226785 None:intergenic
TGTAGTGATCCTGATGCTCC+TGG 0.490637 3_3:-14225898 Msa0443470:intron
CCATCCCATGAGAGGCAGTT+GGG 0.495045 3_3:-14225378 Msa0443470:CDS
ATACCACTCCGCATCCTTGT+GGG 0.495435 3_3:+14227326 None:intergenic
TCGTGGGAATCGGCGAGACC+AGG 0.497837 3_3:-14225442 Msa0443470:CDS
CCATCTTCGTATGATCCATC+AGG 0.498285 3_3:-14225101 Msa0443470:CDS
TTTGATTATCCACCAAAACC+TGG 0.502490 3_3:+14224054 None:intergenic
GCATGAAGAAACAGCTAAGT+CGG 0.504054 3_3:-14226318 Msa0443470:CDS
TATATTCCGATCCCACTTAG+TGG 0.504498 3_3:-14224030 Msa0443470:three_prime_UTR
TTTGCAGTCCTTACTTCCAA+GGG 0.506157 3_3:+14226236 None:intergenic
ATGCGTTCTGGTCCTCACAT+AGG 0.506680 3_3:-14225071 Msa0443470:CDS
GGCATCAAAACTGGAGGAGG+GGG 0.507533 3_3:+14225291 None:intergenic
CAAATCTGCATAACCGCGAT+TGG 0.508789 3_3:+14228479 None:intergenic
TTTAGGCATGTGAGACCAGA+AGG 0.513433 3_3:-14226347 Msa0443470:CDS
ATGCAGATGTTTAGGGATCA+AGG 0.515375 3_3:-14225125 Msa0443470:CDS
ATCTGCATCGCAACTTCTGG+TGG 0.515886 3_3:+14225140 None:intergenic
ACCAACCCGGCACCAGGTAC+AGG 0.516357 3_3:+14225270 None:intergenic
GTTATGCAGATTTGCCAAGT+GGG 0.524038 3_3:-14228470 Msa0443470:CDS
TGCATGACAGGCGTTCCACC+AGG 0.524219 3_3:+14225880 None:intergenic
GATACAAGAAGATATTCATC+AGG 0.525306 3_3:-14226618 Msa0443470:CDS
TGGAATTAACATCAAAATTG+CGG 0.525419 3_3:-14226043 Msa0443470:CDS
CTTGTGAATTATTTCAGAGA+GGG 0.526093 3_3:-14227578 Msa0443470:CDS
CCCAACTGCCTCTCATGGGA+TGG 0.526209 3_3:+14225378 None:intergenic
TATACTCTGACTTGTACTCT+TGG 0.527237 3_3:+14227379 None:intergenic
GAAACAATGTTCGATGCATA+TGG 0.530275 3_3:-14225345 Msa0443470:CDS
TTGGCTCATTGAGATTGGAT+TGG 0.531912 3_3:-14224292 Msa0443470:three_prime_UTR
TCTGGTGGAGCAGGAACAAA+GGG 0.532051 3_3:+14225155 None:intergenic
TTCCCGAGCAAAATGCTACC+TGG 0.532763 3_3:-14224153 Msa0443470:three_prime_UTR
TTAGGGATGAAAAGTATGGT+TGG 0.532966 3_3:-14226160 Msa0443470:CDS
CTTCTAGGTTCAGAACTGAC+AGG 0.537567 3_3:+14226641 None:intergenic
TAAGGCTCGCAGTGGATCTG+TGG 0.539326 3_3:-14226510 Msa0443470:CDS
ACAACTAATCTCTTCAATGA+AGG 0.542635 3_3:-14228359 Msa0443470:intron
AAGCCACGGATAATTACTAC+AGG 0.543566 3_3:+14226485 None:intergenic
TTTGTGGATGTCAGTGACCT+GGG 0.544843 3_3:-14223914 Msa0443470:three_prime_UTR
ACAGGCATCAAAACTGGAGG+AGG 0.544938 3_3:+14225288 None:intergenic
CCGTCGGGGATCAGGTCTAA+AGG 0.547560 3_3:+14225016 None:intergenic
GAACGCATCGTCATTCCTGA+TGG 0.548956 3_3:+14225086 None:intergenic
GACCTGATCCCCGACGGATG+CGG 0.552652 3_3:-14225010 Msa0443470:CDS
CAAAGCCTTATCCCACTAAG+TGG 0.552931 3_3:+14224018 None:intergenic
ACATCTATTAAGGGCTTAGA+GGG 0.553584 3_3:-14226461 Msa0443470:CDS
GTTTCCCAACTGCCTCTCAT+GGG 0.553750 3_3:+14225374 None:intergenic
TTTCAATACCCACAAGGATG+CGG 0.555795 3_3:-14227334 Msa0443470:CDS
AGAGAAACCAACCCGGCACC+AGG 0.556392 3_3:+14225264 None:intergenic
TATACCACTCCGCATCCTTG+TGG 0.557388 3_3:+14227325 None:intergenic
TGAATCAGAATGGAGATCAA+TGG 0.558047 3_3:-14229910 None:intergenic
CCTGATGGATCATACGAAGA+TGG 0.561638 3_3:+14225101 None:intergenic
TTATACCTATTCAGGCCTCT+GGG 0.561914 3_3:-14225179 Msa0443470:intron
AGGACAAGCCTTTAAAGCGA+AGG 0.563691 3_3:-14225491 Msa0443470:CDS
GCCATCCCATGAGAGGCAGT+TGG 0.567581 3_3:-14225379 Msa0443470:CDS
TTCTGGTGGAGCAGGAACAA+AGG 0.568203 3_3:+14225154 None:intergenic
GTAAAAGAAGAAGACATGGC+AGG 0.568918 3_3:-14226709 Msa0443470:CDS
ATTTACTTACAGTAATTGAA+AGG 0.571034 3_3:-14227138 Msa0443470:intron
TTATGCAGATTTGCCAAGTG+GGG 0.573070 3_3:-14228469 Msa0443470:CDS
CTTATCCCACTAAGTGGGAT+CGG 0.573648 3_3:+14224024 None:intergenic
GTCCTATAAGCAATTCATCC+AGG 0.574466 3_3:-14227549 Msa0443470:CDS
TGCTGCAGCAGCTGACATGT+TGG 0.575171 3_3:-14226201 Msa0443470:CDS
GACAGTAACTTCTTCTTCTG+GGG 0.578270 3_3:+14224347 None:intergenic
ATAAGTACCTCCGCATCCGT+CGG 0.578460 3_3:+14225000 None:intergenic
GGAATCGGCGAGACCAGGAT+AGG 0.578499 3_3:-14225437 Msa0443470:CDS
GTAATCTAGTTGTAATAATG+GGG 0.578512 3_3:-14224224 Msa0443470:three_prime_UTR
AGCCAGTGAGCCCAATTCAG+AGG 0.578683 3_3:-14226750 Msa0443470:CDS
CATCGAACATTGTTTCATCA+CGG 0.580490 3_3:+14225352 None:intergenic
TAAAAGAAGAAGACATGGCA+GGG 0.583889 3_3:-14226708 Msa0443470:CDS
AAGTTACTGTCATAGACTAT+CGG 0.585625 3_3:-14224335 Msa0443470:CDS
GCCGATTGAAAGATGATCGT+GGG 0.585756 3_3:-14225458 Msa0443470:CDS
ATGTGAGACCAGAAGGAGCA+AGG 0.587740 3_3:-14226340 Msa0443470:CDS
GGGTAGTTTACAATTTGACC+TGG 0.587884 3_3:+14223884 None:intergenic
TCTGAGTTGAATGATACAGC+AGG 0.589557 3_3:+14225318 None:intergenic
AAGGCTCGCAGTGGATCTGT+GGG 0.592274 3_3:-14226509 Msa0443470:CDS
AAATGCTCGACGTTTGGCAA+AGG 0.592998 3_3:-14226957 Msa0443470:CDS
TTTGACCTGGATTAAAACCC+AGG 0.593127 3_3:+14223897 None:intergenic
ATATTCCGATCCCACTTAGT+GGG 0.594647 3_3:-14224029 Msa0443470:three_prime_UTR
TACCTACGCTCAGCTTCAGA+TGG 0.594958 3_3:+14227506 None:intergenic
TTGATTATCCACCAAAACCT+GGG 0.595127 3_3:+14224055 None:intergenic
TTGTGAATTATTTCAGAGAG+GGG 0.596322 3_3:-14227577 Msa0443470:CDS
CGGGGATCAGGTCTAAAGGT+GGG 0.597507 3_3:+14225020 None:intergenic
TTAATTCCAACACAAGCTCT+GGG 0.597647 3_3:+14226057 None:intergenic
TATGCAGATTTGCCAAGTGG+GGG 0.600967 3_3:-14228468 Msa0443470:CDS
ATAGGAAAAGACCTGATACA+AGG 0.607113 3_3:+14223939 None:intergenic
TCGGGGATCAGGTCTAAAGG+TGG 0.610998 3_3:+14225019 None:intergenic
AAAACACCCAGAGCTTGTGT+TGG 0.614464 3_3:-14226063 Msa0443470:CDS
CTGATCCCCGACGGATGCGG+AGG 0.614753 3_3:-14225007 Msa0443470:intron
CAGGCATCAAAACTGGAGGA+GGG 0.615388 3_3:+14225289 None:intergenic
GGTTATGCAGATTTGCCAAG+TGG 0.618297 3_3:-14228471 Msa0443470:CDS
TCAGAGGAGGAAACAGATGC+CGG 0.623419 3_3:-14226734 Msa0443470:CDS
GTGGTGCAGTTATCAAGACT+TGG 0.626723 3_3:-14224373 Msa0443470:intron
AGTGATCCTGATGCTCCTGG+TGG 0.627928 3_3:-14225895 Msa0443470:CDS
CCTTTAGACCTGATCCCCGA+CGG 0.633767 3_3:-14225016 Msa0443470:CDS
AAGTACCTCCGCATCCGTCG+GGG 0.635573 3_3:+14225002 None:intergenic
GGCCGATTGAAAGATGATCG+TGG 0.636197 3_3:-14225459 Msa0443470:CDS
TATGGTTGGAAGTATGGCTG+TGG 0.637523 3_3:-14226146 Msa0443470:CDS
ATAGTTCGCCATCCCATGAG+AGG 0.637985 3_3:-14225386 Msa0443470:CDS
TTAAAGCGAAGGTTACTGGA+AGG 0.638659 3_3:-14225480 Msa0443470:CDS
GCTTGTGAATTATTTCAGAG+AGG 0.640164 3_3:-14227579 Msa0443470:CDS
CCTTAATAGATGTTAAGCCA+CGG 0.640737 3_3:+14226471 None:intergenic
CAGTGAGCCCAATTCAGAGG+AGG 0.641145 3_3:-14226747 Msa0443470:CDS
CGTTCTGGTCCTCACATAGG+GGG 0.645123 3_3:-14225068 Msa0443470:CDS
GCGTTCTGGTCCTCACATAG+GGG 0.645525 3_3:-14225069 Msa0443470:CDS
CTTGAGACTAGTGATGCCAA+AGG 0.645562 3_3:-14226371 Msa0443470:CDS
GCAGATCTGGATGCCAATCG+CGG 0.645963 3_3:-14228492 Msa0443470:intron
CTTGGAAGTAAGGACTGCAA+AGG 0.649139 3_3:-14226234 Msa0443470:CDS
TGTTGTTCGTAAGCTTGACA+AGG 0.650753 3_3:-14226588 Msa0443470:CDS
GGGAGGAACAGCAATCATAG+AGG 0.652456 3_3:+14225040 None:intergenic
AAAGCCTTATCCCACTAAGT+GGG 0.653056 3_3:+14224019 None:intergenic
TTCTAGGTTCAGAACTGACA+GGG 0.653359 3_3:+14226642 None:intergenic
AGGCATCAAAACTGGAGGAG+GGG 0.658058 3_3:+14225290 None:intergenic
AATAGTGATAAGGCTCGCAG+TGG 0.662545 3_3:-14226518 Msa0443470:CDS
TAATCTAGTTGTAATAATGG+GGG 0.662924 3_3:-14224223 Msa0443470:three_prime_UTR
AGCTTATTTCAATACCCACA+AGG 0.664399 3_3:-14227340 Msa0443470:CDS
GGCCCTGTAGTAATTATCCG+TGG 0.666056 3_3:-14226488 Msa0443470:CDS
TGCCATCTGAAGCTGAGCGT+AGG 0.669466 3_3:-14227508 Msa0443470:intron
AAAAGAAGAAGACATGGCAG+GGG 0.670768 3_3:-14226707 Msa0443470:CDS
ACAATGTTCGATGCATATGG+TGG 0.677228 3_3:-14225342 Msa0443470:CDS
ATGAAGAAACAGCTAAGTCG+GGG 0.681698 3_3:-14226316 Msa0443470:CDS
GGATCAGGTCTAAAGGTGGG+AGG 0.688645 3_3:+14225023 None:intergenic
GGTGGTAAAAGAAGAAGACA+TGG 0.697775 3_3:-14226713 Msa0443470:CDS
GCAGGAACAAAGGGTCCCAG+AGG 0.699153 3_3:+14225164 None:intergenic
GGTACAGGCATCAAAACTGG+AGG 0.702355 3_3:+14225285 None:intergenic
GAGGAGGAAACAGATGCCGG+TGG 0.705310 3_3:-14226731 Msa0443470:CDS
ATTATCCACCAAAACCTGGG+AGG 0.707559 3_3:+14224058 None:intergenic
ATACCCACAAGGATGCGGAG+TGG 0.729545 3_3:-14227329 Msa0443470:intron
AGCCACGGATAATTACTACA+GGG 0.753218 3_3:+14226486 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAAAAAATCAATAG+AGG + chr3_3:14224746-14224765 None:intergenic 10.0%
!!! TTAATATGTTTTTTATGTTA+TGG - chr3_3:14225219-14225238 Msa0443470:intron 10.0%
!!! TAATATGTTTTTTATGTTAT+GGG - chr3_3:14225220-14225239 Msa0443470:intron 10.0%
!! ATAAACAAAAAAATTTGATT+TGG + chr3_3:14228820-14228839 None:intergenic 10.0%
!! TAAAATACAATAAAATAACA+TGG + chr3_3:14228928-14228947 None:intergenic 10.0%
!! TAAAATACATACTGAATTAT+GGG + chr3_3:14224505-14224524 None:intergenic 15.0%
!! ATAAAATACATACTGAATTA+TGG + chr3_3:14224506-14224525 None:intergenic 15.0%
!! TAAATCTTGATCAATTAATT+GGG - chr3_3:14225117-14225136 Msa0443470:CDS 15.0%
!!! TATGTATAAATTTCCTTTTA+GGG - chr3_3:14225181-14225200 Msa0443470:intron 15.0%
!!! AATTTTCAAATATTCTTAGA+TGG - chr3_3:14225503-14225522 Msa0443470:intron 15.0%
!! TTTAGATCAAAATCAATTAA+CGG + chr3_3:14226558-14226577 None:intergenic 15.0%
!! TATATAATTTATACCTATTC+AGG - chr3_3:14228566-14228585 Msa0443470:intron 15.0%
!! ACATAAAAAATAGTATGATT+TGG + chr3_3:14228864-14228883 None:intergenic 15.0%
!! TCTAAAAATCACATAAAAAA+GGG + chr3_3:14228888-14228907 None:intergenic 15.0%
!!! TTATTTTATTGTATTTTACC+TGG - chr3_3:14228930-14228949 Msa0443470:intron 15.0%
!!! GTCCTTAAGTTTTTTAAATT+TGG - chr3_3:14223938-14223957 Msa0443470:three_prime_UTR 20.0%
!! TGCCAAATTTAAAAAACTTA+AGG + chr3_3:14223943-14223962 None:intergenic 20.0%
!! TAAAATACTTCTGTAGTAAA+AGG - chr3_3:14224637-14224656 Msa0443470:intron 20.0%
!! GAGAATAAAAAAAACAGTAT+TGG + chr3_3:14225012-14225031 None:intergenic 20.0%
!! CTAAATCTTGATCAATTAAT+TGG - chr3_3:14225116-14225135 Msa0443470:CDS 20.0%
!!! GTATGTATAAATTTCCTTTT+AGG - chr3_3:14225180-14225199 Msa0443470:intron 20.0%
!!! TTTTTATGTTATGGGTTTTA+TGG - chr3_3:14225228-14225247 Msa0443470:intron 20.0%
!!! TTTTATGTTATGGGTTTTAT+GGG - chr3_3:14225229-14225248 Msa0443470:intron 20.0%
!!! TTTCTCTTTTGTTTTTCATT+TGG - chr3_3:14225981-14226000 Msa0443470:intron 20.0%
!! ATTACTGTAAGTAAATTTGT+TGG + chr3_3:14226611-14226630 None:intergenic 20.0%
!! ATTTACTTACAGTAATTGAA+AGG - chr3_3:14226615-14226634 Msa0443470:CDS 20.0%
!! TAATTATATTCAATCCTATC+TGG - chr3_3:14226749-14226768 Msa0443470:CDS 20.0%
!! TCTCATAATTCAATGAATTT+AGG + chr3_3:14226920-14226939 None:intergenic 20.0%
!! TCATAGTAAAAATAGTGATA+AGG - chr3_3:14227225-14227244 Msa0443470:intron 20.0%
!!! AGAAAAAACTTGATTCATTT+TGG - chr3_3:14227470-14227489 Msa0443470:intron 20.0%
!! ATCCATATGTTAGAAAAATT+AGG - chr3_3:14227575-14227594 Msa0443470:CDS 20.0%
!! TCCATATGTTAGAAAAATTA+GGG - chr3_3:14227576-14227595 Msa0443470:CDS 20.0%
!! AACCACTAAACAAAAATAAA+AGG + chr3_3:14227785-14227804 None:intergenic 20.0%
!! CTTCTAGATATAAAATTGTA+TGG + chr3_3:14227930-14227949 None:intergenic 20.0%
!!! TACAATTAAAAGCTTTATTG+AGG - chr3_3:14228531-14228550 Msa0443470:intron 20.0%
!!! CTCTAAAAATCACATAAAAA+AGG + chr3_3:14228889-14228908 None:intergenic 20.0%
!!! ATAAAGTTGATTGACATTTT+GGG - chr3_3:14228996-14229015 Msa0443470:intron 20.0%
!!! TCAATTTTATAAAACACATG+TGG - chr3_3:14229190-14229209 Msa0443470:intron 20.0%
!! TGGATTATTAAAATAACATG+TGG - chr3_3:14229210-14229229 Msa0443470:intron 20.0%
!! ATTATTAAAATAACATGTGG+TGG - chr3_3:14229213-14229232 Msa0443470:intron 20.0%
!! TTATTAAAATAACATGTGGT+GGG - chr3_3:14229214-14229233 Msa0443470:intron 20.0%
!!! TAATTTTAGTCAACTATACT+CGG - chr3_3:14229498-14229517 Msa0443470:intron 20.0%
!! TGTAATCTAGTTGTAATAAT+GGG - chr3_3:14229528-14229547 Msa0443470:intron 20.0%
!! CTATGGTTAAAAAATTATGT+TGG - chr3_3:14229791-14229810 Msa0443470:intron 20.0%
!! GCAAATTGAAATTATGATTT+GGG + chr3_3:14229892-14229911 None:intergenic 20.0%
!! AGCAAATTGAAATTATGATT+TGG + chr3_3:14229893-14229912 None:intergenic 20.0%
! GCTTTCTTATAGTAGTATTA+AGG + chr3_3:14223883-14223902 None:intergenic 25.0%
! AGTTAACAATGGAATTCTAA+AGG + chr3_3:14223977-14223996 None:intergenic 25.0%
!! GTCTAAAGTTTAGTTAACAA+TGG + chr3_3:14223988-14224007 None:intergenic 25.0%
! TTTCTCTCATGTAATCTTAA+GGG - chr3_3:14224008-14224027 Msa0443470:three_prime_UTR 25.0%
! AACAACAATCACATTTGATT+GGG + chr3_3:14224368-14224387 None:intergenic 25.0%
! AAACAACAATCACATTTGAT+TGG + chr3_3:14224369-14224388 None:intergenic 25.0%
!!! ATCAAATGTGATTGTTGTTT+TGG - chr3_3:14224369-14224388 Msa0443470:intron 25.0%
!!! TCAAATGTGATTGTTGTTTT+GGG - chr3_3:14224370-14224389 Msa0443470:intron 25.0%
!! TTTAGTCTATTCAGTGTTTT+TGG - chr3_3:14224533-14224552 Msa0443470:intron 25.0%
!! TTAGTCTATTCAGTGTTTTT+GGG - chr3_3:14224534-14224553 Msa0443470:intron 25.0%
!! ATTTTATTCTTTTCTCCTGA+TGG - chr3_3:14224775-14224794 Msa0443470:intron 25.0%
! TGTAATATTGAGACATTCAA+TGG - chr3_3:14224857-14224876 Msa0443470:intron 25.0%
!! CAAGATTTAGAACTAGATAA+CGG + chr3_3:14225106-14225125 None:intergenic 25.0%
! TTCAAAGAAATACATGATAC+AGG + chr3_3:14225369-14225388 None:intergenic 25.0%
! TAATGTTCCAATATCTTGAA+TGG - chr3_3:14225526-14225545 Msa0443470:intron 25.0%
! AATGTTCCAATATCTTGAAT+GGG - chr3_3:14225527-14225546 Msa0443470:intron 25.0%
! CTTGTATAATCACTATAACA+AGG + chr3_3:14225573-14225592 None:intergenic 25.0%
!! CTTGTTATAGTGATTATACA+AGG - chr3_3:14225571-14225590 Msa0443470:intron 25.0%
!! AACTTAGCAATGTGATATTT+TGG - chr3_3:14226129-14226148 Msa0443470:CDS 25.0%
!! ACTTAGCAATGTGATATTTT+GGG - chr3_3:14226130-14226149 Msa0443470:CDS 25.0%
!!! ATTGAAATAAGCTCGTTTTT+GGG + chr3_3:14226406-14226425 None:intergenic 25.0%
!! TATTGAAATAAGCTCGTTTT+TGG + chr3_3:14226407-14226426 None:intergenic 25.0%
! TTTGATCTAAACTTTGATGT+AGG - chr3_3:14226567-14226586 Msa0443470:CDS 25.0%
! ACACACTTATAACATATCTT+TGG - chr3_3:14227329-14227348 Msa0443470:intron 25.0%
! ATTCATGGTGTAGATTATTA+TGG - chr3_3:14227355-14227374 Msa0443470:CDS 25.0%
!! TCCCTAATTTTTCTAACATA+TGG + chr3_3:14227580-14227599 None:intergenic 25.0%
! AAAATTAGGGATGAAAAGTA+TGG - chr3_3:14227589-14227608 Msa0443470:CDS 25.0%
! TGGAATTAACATCAAAATTG+CGG - chr3_3:14227710-14227729 Msa0443470:intron 25.0%
!!! AGCCTTTTATTTTTGTTTAG+TGG - chr3_3:14227780-14227799 Msa0443470:intron 25.0%
!!! CACATGTTTTGAAAACATTT+TGG - chr3_3:14227994-14228013 Msa0443470:intron 25.0%
! GCTTGTAAAATCCTATATTA+AGG + chr3_3:14228031-14228050 None:intergenic 25.0%
! AAGGGAACATATATAAACAA+GGG + chr3_3:14228788-14228807 None:intergenic 25.0%
! AAAGGGAACATATATAAACA+AGG + chr3_3:14228789-14228808 None:intergenic 25.0%
!! TGTTTATATATGTTCCCTTT+TGG - chr3_3:14228789-14228808 Msa0443470:intron 25.0%
! CAAAATGTCAATCAACTTTA+TGG + chr3_3:14228997-14229016 None:intergenic 25.0%
!!! CATAAAGTTGATTGACATTT+TGG - chr3_3:14228995-14229014 Msa0443470:intron 25.0%
! GAGTAAAAGATTATGCATAT+AGG + chr3_3:14229090-14229109 None:intergenic 25.0%
!!! AGTATTTCTATTTTCTACTG+TGG - chr3_3:14229237-14229256 Msa0443470:intron 25.0%
!!! TCAATATGTTAGATAATGGA+TGG + chr3_3:14229303-14229322 None:intergenic 25.0%
! CAACTCAATATGTTAGATAA+TGG + chr3_3:14229307-14229326 None:intergenic 25.0%
! TTAAACTAATTTCCTAATCG+TGG - chr3_3:14229361-14229380 Msa0443470:intron 25.0%
! CTGTAATCTAGTTGTAATAA+TGG - chr3_3:14229527-14229546 Msa0443470:intron 25.0%
! GTAATCTAGTTGTAATAATG+GGG - chr3_3:14229529-14229548 Msa0443470:intron 25.0%
! TAATCTAGTTGTAATAATGG+GGG - chr3_3:14229530-14229549 Msa0443470:intron 25.0%
! TTCTAATGTTACAACATCTA+TGG + chr3_3:14229577-14229596 None:intergenic 25.0%
CTTTCTCTCATGTAATCTTA+AGG - chr3_3:14224007-14224026 Msa0443470:three_prime_UTR 30.0%
CTCCATAATGAAATATGTTC+CGG - chr3_3:14224084-14224103 Msa0443470:three_prime_UTR 30.0%
!!! CAAATGTGATTGTTGTTTTG+GGG - chr3_3:14224371-14224390 Msa0443470:intron 30.0%
!! TAGTCTATTCAGTGTTTTTG+GGG - chr3_3:14224535-14224554 Msa0443470:intron 30.0%
GAAAGAACTAAAAATGACAC+CGG + chr3_3:14224602-14224621 None:intergenic 30.0%
TAAAAGGTTACTTCTTCAGA+CGG - chr3_3:14224653-14224672 Msa0443470:intron 30.0%
! GAAATAATTTGACTTCCATC+AGG + chr3_3:14224793-14224812 None:intergenic 30.0%
!!! TCAGTTTTGAATGACAAGAA+TGG + chr3_3:14224815-14224834 None:intergenic 30.0%
CTTGATCAATTAATTGGGAA+AGG - chr3_3:14225122-14225141 Msa0443470:CDS 30.0%
ATAATTTACGTCACCCTAAA+AGG + chr3_3:14225197-14225216 None:intergenic 30.0%
ACAACTAATCTCTTCAATGA+AGG - chr3_3:14225394-14225413 Msa0443470:CDS 30.0%
GGTTATTGACAAACGAAATA+TGG - chr3_3:14225415-14225434 Msa0443470:CDS 30.0%
ATCTTGCACTCTTAGTATAT+TGG + chr3_3:14225449-14225468 None:intergenic 30.0%
TTTATCACCATAGGAGAATT+GGG + chr3_3:14225702-14225721 None:intergenic 30.0%
ATTTATCACCATAGGAGAAT+TGG + chr3_3:14225703-14225722 None:intergenic 30.0%
ATTCTCCTATGGTGATAAAT+AGG - chr3_3:14225703-14225722 Msa0443470:intron 30.0%
ATATGCCTATTTATCACCAT+AGG + chr3_3:14225711-14225730 None:intergenic 30.0%
TATGGTGATAAATAGGCATA+TGG - chr3_3:14225710-14225729 Msa0443470:intron 30.0%
AAGTGGCAAATTGACATAAT+GGG + chr3_3:14225856-14225875 None:intergenic 30.0%
CACATTATCTGTTTACTTTG+AGG - chr3_3:14225929-14225948 Msa0443470:intron 30.0%
!! CTTTTGACTATCATTCATCT+AGG + chr3_3:14226039-14226058 None:intergenic 30.0%
CTAGATGAATGATAGTCAAA+AGG - chr3_3:14226037-14226056 Msa0443470:CDS 30.0%
! CTTAGCAATGTGATATTTTG+GGG - chr3_3:14226131-14226150 Msa0443470:CDS 30.0%
CTTGTGAATTATTTCAGAGA+GGG - chr3_3:14226175-14226194 Msa0443470:CDS 30.0%
TTGTGAATTATTTCAGAGAG+GGG - chr3_3:14226176-14226195 Msa0443470:CDS 30.0%
GAGCTAAGAAAAAACGTAAA+AGG + chr3_3:14226291-14226310 None:intergenic 30.0%
ATTGCAACATCATTCATCAA+TGG + chr3_3:14226339-14226358 None:intergenic 30.0%
TCAATTGAAATTTCAGCAGT+GGG + chr3_3:14226463-14226482 None:intergenic 30.0%
TAAAAGATTATGTGCCAGAT+AGG + chr3_3:14226766-14226785 None:intergenic 30.0%
! TATCTGGCACATAATCTTTT+AGG - chr3_3:14226765-14226784 Msa0443470:CDS 30.0%
!!! TTTTTGCTTGATTTGCAAAG+TGG - chr3_3:14226821-14226840 Msa0443470:intron 30.0%
ATATCTTCTTGTATCCTTCT+AGG + chr3_3:14227130-14227149 None:intergenic 30.0%
GATACAAGAAGATATTCATC+AGG - chr3_3:14227135-14227154 Msa0443470:intron 30.0%
CACTTATAACATATCTTTGG+CGG - chr3_3:14227332-14227351 Msa0443470:CDS 30.0%
GGAATTAACATCAAAATTGC+GGG - chr3_3:14227711-14227730 Msa0443470:intron 30.0%
! GTTTTCAAAACATGTGATCA+CGG + chr3_3:14227990-14228009 None:intergenic 30.0%
TCTCTTGTCTACCTTAATAT+AGG - chr3_3:14228017-14228036 Msa0443470:intron 30.0%
AAATATATGCTGCTGTCTAT+GGG - chr3_3:14228115-14228134 Msa0443470:intron 30.0%
GACTTTGTGCAGAAATATAT+TGG + chr3_3:14228185-14228204 None:intergenic 30.0%
ATTTCTGCACAAAGTCATTA+TGG - chr3_3:14228189-14228208 Msa0443470:intron 30.0%
GAAGAAAGAAAATGGAGAAT+GGG + chr3_3:14228230-14228249 None:intergenic 30.0%
!! TTGATTTGGAGATACCAAAA+GGG + chr3_3:14228806-14228825 None:intergenic 30.0%
!! TTTGATTTGGAGATACCAAA+AGG + chr3_3:14228807-14228826 None:intergenic 30.0%
AAAACCAAAACCAATTCTAC+TGG + chr3_3:14229028-14229047 None:intergenic 30.0%
!!! AGTAGAATTGGTTTTGGTTT+TGG - chr3_3:14229027-14229046 Msa0443470:intron 30.0%
!!! TTTTGGAACTGTTCTAACTT+GGG - chr3_3:14229044-14229063 Msa0443470:intron 30.0%
AAGATTATGCATATAGGCAA+AGG + chr3_3:14229084-14229103 None:intergenic 30.0%
AAGTTACTGTCATAGACTAT+CGG - chr3_3:14229418-14229437 Msa0443470:intron 30.0%
AAAAATAAGATATAGCAGCC+AGG + chr3_3:14229621-14229640 None:intergenic 30.0%
TGTTGTGGATAATCAAACTA+TGG - chr3_3:14229774-14229793 Msa0443470:intron 30.0%
!! CATCGACTCTTAGATGAAAA+GGG - chr3_3:14224031-14224050 Msa0443470:three_prime_UTR 35.0%
CGGAACATATTTCATTATGG+AGG + chr3_3:14224086-14224105 None:intergenic 35.0%
GTCCGGAACATATTTCATTA+TGG + chr3_3:14224089-14224108 None:intergenic 35.0%
AATGAAATATGTTCCGGACT+AGG - chr3_3:14224090-14224109 Msa0443470:three_prime_UTR 35.0%
GAGCAAATCTTGCTTGTAAA+TGG + chr3_3:14224263-14224282 None:intergenic 35.0%
CACTAACTAACACTTGCTTA+GGG + chr3_3:14224291-14224310 None:intergenic 35.0%
CTAAGCAAGTGTTAGTTAGT+GGG - chr3_3:14224290-14224309 Msa0443470:three_prime_UTR 35.0%
! AAGTGTTAGTTAGTGGGTAT+AGG - chr3_3:14224296-14224315 Msa0443470:three_prime_UTR 35.0%
TAAATACCAAACAACAGCCA+GGG + chr3_3:14225070-14225089 None:intergenic 35.0%
ATAAATACCAAACAACAGCC+AGG + chr3_3:14225071-14225090 None:intergenic 35.0%
!!! TGGGTTTTATTTTGCAGATC+TGG - chr3_3:14225248-14225267 Msa0443470:intron 35.0%
AAGAAATACATGATACAGGC+AGG + chr3_3:14225365-14225384 None:intergenic 35.0%
TCCATAATCTCATCTCAAAG+CGG + chr3_3:14225636-14225655 None:intergenic 35.0%
GATGAGATTATGGATGTTCT+TGG - chr3_3:14225642-14225661 Msa0443470:intron 35.0%
TTATCACCATAGGAGAATTG+GGG + chr3_3:14225701-14225720 None:intergenic 35.0%
! AGTTGTTGTTAAGAAGACTG+AGG - chr3_3:14225791-14225810 Msa0443470:intron 35.0%
! GTTGTTGTTAAGAAGACTGA+GGG - chr3_3:14225792-14225811 Msa0443470:intron 35.0%
! TTGTTGTTAAGAAGACTGAG+GGG - chr3_3:14225793-14225812 Msa0443470:intron 35.0%
AGTGGCAAATTGACATAATG+GGG + chr3_3:14225855-14225874 None:intergenic 35.0%
GAAGTGGCAAATTGACATAA+TGG + chr3_3:14225857-14225876 None:intergenic 35.0%
TTGGGATTGTTTGAAAGAAG+TGG + chr3_3:14225873-14225892 None:intergenic 35.0%
AACAATCCCAAAGTCTTCTT+TGG - chr3_3:14225882-14225901 Msa0443470:CDS 35.0%
! CTGTTTACTTTGAGGAAGAT+TGG - chr3_3:14225937-14225956 Msa0443470:intron 35.0%
AGTCAAAAGGTTAGAGATAG+AGG - chr3_3:14226050-14226069 Msa0443470:CDS 35.0%
GTCAAAAGGTTAGAGATAGA+GGG - chr3_3:14226051-14226070 Msa0443470:CDS 35.0%
GCTTGTGAATTATTTCAGAG+AGG - chr3_3:14226174-14226193 Msa0443470:CDS 35.0%
! TATACTCTGACTTGTACTCT+TGG + chr3_3:14226377-14226396 None:intergenic 35.0%
AGCTTATTTCAATACCCACA+AGG - chr3_3:14226413-14226432 Msa0443470:CDS 35.0%
GTCAATTGAAATTTCAGCAG+TGG + chr3_3:14226464-14226483 None:intergenic 35.0%
ACCATTCATCAACGTAAAGA+GGG + chr3_3:14226687-14226706 None:intergenic 35.0%
TACCATTCATCAACGTAAAG+AGG + chr3_3:14226688-14226707 None:intergenic 35.0%
TGAATGGTAGAGAAATAGTC+AGG - chr3_3:14226699-14226718 Msa0443470:CDS 35.0%
AAACACACATAAAGTGAGAG+AGG + chr3_3:14226871-14226890 None:intergenic 35.0%
! TATGATTTGTGCAGAAATCC+AGG - chr3_3:14226950-14226969 Msa0443470:CDS 35.0%
! ATGTCTTCTTCTTTTACCAC+CGG + chr3_3:14227041-14227060 None:intergenic 35.0%
TAAAAGAAGAAGACATGGCA+GGG - chr3_3:14227045-14227064 Msa0443470:intron 35.0%
AGAAGATATTCATCAGGTTC+AGG - chr3_3:14227141-14227160 Msa0443470:CDS 35.0%
GTAAGCTTGACAAGGAAAAA+GGG - chr3_3:14227173-14227192 Msa0443470:intron 35.0%
CCTTAATAGATGTTAAGCCA+CGG + chr3_3:14227285-14227304 None:intergenic 35.0%
CGTGGCTTAACATCTATTAA+GGG - chr3_3:14227283-14227302 Msa0443470:intron 35.0%
AACATCTATTAAGGGCTTAG+AGG - chr3_3:14227291-14227310 Msa0443470:intron 35.0%
ACATCTATTAAGGGCTTAGA+GGG - chr3_3:14227292-14227311 Msa0443470:intron 35.0%
!! TTGATTCATTTTGGCAGAGA+AGG - chr3_3:14227479-14227498 Msa0443470:intron 35.0%
! TTAGGGATGAAAAGTATGGT+TGG - chr3_3:14227593-14227612 Msa0443470:CDS 35.0%
! GAAAAGTATGGTTGGAAGTA+TGG - chr3_3:14227601-14227620 Msa0443470:CDS 35.0%
! AAAAAGCTTTGTGCAACTCT+TGG + chr3_3:14227635-14227654 None:intergenic 35.0%
TTAATTCCAACACAAGCTCT+GGG + chr3_3:14227699-14227718 None:intergenic 35.0%
TTAGTGGTTAATCTTGCAAG+TGG - chr3_3:14227796-14227815 Msa0443470:intron 35.0%
AGACAGCAGCATATATTTCA+AGG + chr3_3:14228113-14228132 None:intergenic 35.0%
GAAATATATGCTGCTGTCTA+TGG - chr3_3:14228114-14228133 Msa0443470:intron 35.0%
AATATATGCTGCTGTCTATG+GGG - chr3_3:14228116-14228135 Msa0443470:intron 35.0%
GAGCATGATGTTTCACAATT+GGG - chr3_3:14228143-14228162 Msa0443470:intron 35.0%
GGAAGAAAGAAAATGGAGAA+TGG + chr3_3:14228231-14228250 None:intergenic 35.0%
TAGAGAGGGAAGAAAGAAAA+TGG + chr3_3:14228238-14228257 None:intergenic 35.0%
CTTTCTTCCCTCTCTATTTA+AGG - chr3_3:14228242-14228261 Msa0443470:intron 35.0%
CATCGAACATTGTTTCATCA+CGG + chr3_3:14228404-14228423 None:intergenic 35.0%
GAAACAATGTTCGATGCATA+TGG - chr3_3:14228408-14228427 Msa0443470:intron 35.0%
AAGTAAAAGAGAAACCAACC+CGG + chr3_3:14228499-14228518 None:intergenic 35.0%
!! AAAGCTTTATTGAGGTTTGC+TGG - chr3_3:14228539-14228558 Msa0443470:intron 35.0%
GTCAATCAACTTTATGGAAC+TGG + chr3_3:14228991-14229010 None:intergenic 35.0%
!!! GTTTTGGAACTGTTCTAACT+TGG - chr3_3:14229043-14229062 Msa0443470:intron 35.0%
GTATGTGATTGACTGTTTAG+TGG - chr3_3:14229333-14229352 Msa0443470:intron 35.0%
TGACAGTAACTTCTTCTTCT+GGG + chr3_3:14229410-14229429 None:intergenic 35.0%
ATGACAGTAACTTCTTCTTC+TGG + chr3_3:14229411-14229430 None:intergenic 35.0%
TTGATTATCCACCAAAACCT+GGG + chr3_3:14229701-14229720 None:intergenic 35.0%
TTTGATTATCCACCAAAACC+TGG + chr3_3:14229702-14229721 None:intergenic 35.0%
! TGTTGTTGTTGTTGTTGTTG+TGG - chr3_3:14229756-14229775 Msa0443470:intron 35.0%
!! AATTATGTTGGCCTTGTATC+AGG - chr3_3:14229803-14229822 Msa0443470:intron 35.0%
ATAGGAAAAGACCTGATACA+AGG + chr3_3:14229817-14229836 None:intergenic 35.0%
! AGGTCTTTTCCTATTGTTTG+TGG - chr3_3:14229823-14229842 Msa0443470:intron 35.0%
!! GCATCGACTCTTAGATGAAA+AGG - chr3_3:14224030-14224049 Msa0443470:three_prime_UTR 40.0%
CTCTTAGATGAAAAGGGAGA+AGG - chr3_3:14224037-14224056 Msa0443470:three_prime_UTR 40.0%
CCACTAACTAACACTTGCTT+AGG + chr3_3:14224292-14224311 None:intergenic 40.0%
CCTAAGCAAGTGTTAGTTAG+TGG - chr3_3:14224289-14224308 Msa0443470:three_prime_UTR 40.0%
GACAGTATGTTTCACACATC+TGG + chr3_3:14224441-14224460 None:intergenic 40.0%
!!! CTATTCAGTGTTTTTGGGGT+TGG - chr3_3:14224539-14224558 Msa0443470:intron 40.0%
! TTGAGGTAGCGATTTGAGAT+TGG - chr3_3:14224566-14224585 Msa0443470:intron 40.0%
AAACCACTGAACAGCAAACA+AGG + chr3_3:14224944-14224963 None:intergenic 40.0%
! TTGCTGTTCAGTGGTTTAAG+TGG - chr3_3:14224947-14224966 Msa0443470:intron 40.0%
TGCTGTTCAGTGGTTTAAGT+GGG - chr3_3:14224948-14224967 Msa0443470:intron 40.0%
TTCAGTGGTTTAAGTGGGTA+TGG - chr3_3:14224953-14224972 Msa0443470:intron 40.0%
TGGTTTAAGAATGCCATGCA+GGG + chr3_3:14224992-14225011 None:intergenic 40.0%
TTGGTTTAAGAATGCCATGC+AGG + chr3_3:14224993-14225012 None:intergenic 40.0%
AAATACCAAACAACAGCCAG+GGG + chr3_3:14225069-14225088 None:intergenic 40.0%
GTTATGCAGATTTGCCAAGT+GGG - chr3_3:14225283-14225302 Msa0443470:CDS 40.0%
TTATGCAGATTTGCCAAGTG+GGG - chr3_3:14225284-14225303 Msa0443470:CDS 40.0%
GTTCCAATATCTTGAATGGG+TGG - chr3_3:14225530-14225549 Msa0443470:intron 40.0%
AAGCCACCCATTCAAGATAT+TGG + chr3_3:14225536-14225555 None:intergenic 40.0%
!! ACCGCTTTGAGATGAGATTA+TGG - chr3_3:14225632-14225651 Msa0443470:intron 40.0%
GAGATTATGGATGTTCTTGG+AGG - chr3_3:14225645-14225664 Msa0443470:intron 40.0%
AGATAATGTGATAAAGCCCC+AGG + chr3_3:14225919-14225938 None:intergenic 40.0%
!! CTTTGAGGAAGATTGGTTTC+AGG - chr3_3:14225944-14225963 Msa0443470:intron 40.0%
!! AAGATTGGTTTCAGGCTCTA+TGG - chr3_3:14225952-14225971 Msa0443470:intron 40.0%
AAAAGGTTAGAGATAGAGGG+AGG - chr3_3:14226054-14226073 Msa0443470:CDS 40.0%
! CCACAGAAATCCTGATTTGT+GGG - chr3_3:14226077-14226096 Msa0443470:CDS 40.0%
! AATCCTGATTTGTGGGATGA+TGG - chr3_3:14226084-14226103 Msa0443470:CDS 40.0%
GTCCTATAAGCAATTCATCC+AGG - chr3_3:14226204-14226223 Msa0443470:CDS 40.0%
CTCCTGGATGAATTGCTTAT+AGG + chr3_3:14226209-14226228 None:intergenic 40.0%
GTATATCATCTTCAAGCTCC+TGG + chr3_3:14226225-14226244 None:intergenic 40.0%
TTTCAATACCCACAAGGATG+CGG - chr3_3:14226419-14226438 Msa0443470:CDS 40.0%
! TCCCTCTTTACGTTGATGAA+TGG - chr3_3:14226683-14226702 Msa0443470:CDS 40.0%
! CTGGCACATAATCTTTTAGG+AGG - chr3_3:14226768-14226787 Msa0443470:CDS 40.0%
GAATGAAAATGCTCGACGTT+TGG - chr3_3:14226790-14226809 Msa0443470:CDS 40.0%
AATGAATTTAGGCAAGCGTG+AGG + chr3_3:14226909-14226928 None:intergenic 40.0%
TCTGTTTCCTCCTCTGAATT+GGG + chr3_3:14227016-14227035 None:intergenic 40.0%
ATCTGTTTCCTCCTCTGAAT+TGG + chr3_3:14227017-14227036 None:intergenic 40.0%
GGTGGTAAAAGAAGAAGACA+TGG - chr3_3:14227040-14227059 Msa0443470:intron 40.0%
GTAAAAGAAGAAGACATGGC+AGG - chr3_3:14227044-14227063 Msa0443470:intron 40.0%
AAAAGAAGAAGACATGGCAG+GGG - chr3_3:14227046-14227065 Msa0443470:intron 40.0%
TTCTAGGTTCAGAACTGACA+GGG + chr3_3:14227114-14227133 None:intergenic 40.0%
TGTTGTTCGTAAGCTTGACA+AGG - chr3_3:14227165-14227184 Msa0443470:CDS 40.0%
CGTAAGCTTGACAAGGAAAA+AGG - chr3_3:14227172-14227191 Msa0443470:intron 40.0%
AGCCACGGATAATTACTACA+GGG + chr3_3:14227270-14227289 None:intergenic 40.0%
AAGCCACGGATAATTACTAC+AGG + chr3_3:14227271-14227290 None:intergenic 40.0%
CCGTGGCTTAACATCTATTA+AGG - chr3_3:14227282-14227301 Msa0443470:intron 40.0%
!! ACATATCTTTGGCGGATTCA+TGG - chr3_3:14227340-14227359 Msa0443470:CDS 40.0%
! CTAGTGATGCCAAAGGTTTT+AGG - chr3_3:14227389-14227408 Msa0443470:intron 40.0%
TCTCACATGCCTAAAACCTT+TGG + chr3_3:14227401-14227420 None:intergenic 40.0%
GCATGAAGAAACAGCTAAGT+CGG - chr3_3:14227435-14227454 Msa0443470:intron 40.0%
CATGAAGAAACAGCTAAGTC+GGG - chr3_3:14227436-14227455 Msa0443470:intron 40.0%
ATGAAGAAACAGCTAAGTCG+GGG - chr3_3:14227437-14227456 Msa0443470:intron 40.0%
!! TTCATTTTGGCAGAGAAGGT+TGG - chr3_3:14227483-14227502 Msa0443470:intron 40.0%
TTTGCAGTCCTTACTTCCAA+GGG + chr3_3:14227520-14227539 None:intergenic 40.0%
GTTAATTCCAACACAAGCTC+TGG + chr3_3:14227700-14227719 None:intergenic 40.0%
CATCAGGATCACTACAATGA+AGG + chr3_3:14227851-14227870 None:intergenic 40.0%
TACAAGCAACTTTGCAGATG+TGG - chr3_3:14228044-14228063 Msa0443470:intron 40.0%
GGAGCATGATGTTTCACAAT+TGG - chr3_3:14228142-14228161 Msa0443470:intron 40.0%
GGCTTGTCCTTAAATAGAGA+GGG + chr3_3:14228252-14228271 None:intergenic 40.0%
AGGCTTGTCCTTAAATAGAG+AGG + chr3_3:14228253-14228272 None:intergenic 40.0%
TCCAGTAACCTTCGCTTTAA+AGG + chr3_3:14228273-14228292 None:intergenic 40.0%
TTAAAGCGAAGGTTACTGGA+AGG - chr3_3:14228273-14228292 Msa0443470:intron 40.0%
TCCCACGATCATCTTTCAAT+CGG + chr3_3:14228299-14228318 None:intergenic 40.0%
TGAAAGATGATCGTGGGAAT+CGG - chr3_3:14228301-14228320 Msa0443470:intron 40.0%
ACAATGTTCGATGCATATGG+TGG - chr3_3:14228411-14228430 Msa0443470:intron 40.0%
! TCTGAGTTGAATGATACAGC+AGG + chr3_3:14228438-14228457 None:intergenic 40.0%
TTTATACCTATTCAGGCCTC+TGG - chr3_3:14228573-14228592 Msa0443470:intron 40.0%
TTATACCTATTCAGGCCTCT+GGG - chr3_3:14228574-14228593 Msa0443470:intron 40.0%
AAGTTGCGATGCAGATGTTT+AGG - chr3_3:14228620-14228639 Msa0443470:intron 40.0%
AGTTGCGATGCAGATGTTTA+GGG - chr3_3:14228621-14228640 Msa0443470:intron 40.0%
ATGCAGATGTTTAGGGATCA+AGG - chr3_3:14228628-14228647 Msa0443470:intron 40.0%
!! CTCTCCAGTAGAATTGGTTT+TGG - chr3_3:14229021-14229040 Msa0443470:intron 40.0%
! TTGATAACTGCACCACGATT+AGG + chr3_3:14229376-14229395 None:intergenic 40.0%
GACAGTAACTTCTTCTTCTG+GGG + chr3_3:14229409-14229428 None:intergenic 40.0%
TTGGCTCATTGAGATTGGAT+TGG - chr3_3:14229461-14229480 Msa0443470:intron 40.0%
TCAATCAAAAACTACCTCCC+AGG - chr3_3:14229681-14229700 Msa0443470:intron 40.0%
! AAAAACTACCTCCCAGGTTT+TGG - chr3_3:14229687-14229706 Msa0443470:intron 40.0%
TATATTCCGATCCCACTTAG+TGG - chr3_3:14229723-14229742 Msa0443470:intron 40.0%
ATATTCCGATCCCACTTAGT+GGG - chr3_3:14229724-14229743 Msa0443470:intron 40.0%
! AAAGCCTTATCCCACTAAGT+GGG + chr3_3:14229737-14229756 None:intergenic 40.0%
CACTGACATCCACAAACAAT+AGG + chr3_3:14229835-14229854 None:intergenic 40.0%
TTTGACCTGGATTAAAACCC+AGG + chr3_3:14229859-14229878 None:intergenic 40.0%
GGGTAGTTTACAATTTGACC+TGG + chr3_3:14229872-14229891 None:intergenic 40.0%
! ATATGTTCCGGACTAGGCAA+AGG - chr3_3:14224096-14224115 Msa0443470:three_prime_UTR 45.0%
GTGTGCAGCAACTCAGATTA+GGG + chr3_3:14224337-14224356 None:intergenic 45.0%
AGTGTGCAGCAACTCAGATT+AGG + chr3_3:14224338-14224357 None:intergenic 45.0%
TCTCAAATCGCTACCTCAAG+TGG + chr3_3:14224565-14224584 None:intergenic 45.0%
! TGAGATTGGTCACTATGCTC+CGG - chr3_3:14224580-14224599 Msa0443470:intron 45.0%
!! TGTCCTTGTTTGCTGTTCAG+TGG - chr3_3:14224938-14224957 Msa0443470:intron 45.0%
GGTTTAAGAATGCCATGCAG+GGG + chr3_3:14224991-14225010 None:intergenic 45.0%
ATTCTCTCCCCACCTCTTAA+TGG - chr3_3:14225026-14225045 Msa0443470:CDS 45.0%
AAACACACCCCTCCATTAAG+AGG + chr3_3:14225041-14225060 None:intergenic 45.0%
AATACCAAACAACAGCCAGG+GGG + chr3_3:14225068-14225087 None:intergenic 45.0%
CAAATCTGCATAACCGCGAT+TGG + chr3_3:14225277-14225296 None:intergenic 45.0%
GGTTATGCAGATTTGCCAAG+TGG - chr3_3:14225282-14225301 Msa0443470:CDS 45.0%
TATGCAGATTTGCCAAGTGG+GGG - chr3_3:14225285-14225304 Msa0443470:CDS 45.0%
AGTAGCACTCAACAGAGATC+TGG + chr3_3:14225603-14225622 None:intergenic 45.0%
TCTTGGAGGAATTTGACGTG+CGG - chr3_3:14225659-14225678 Msa0443470:intron 45.0%
TGAACACCCCAATTCTCCTA+TGG - chr3_3:14225692-14225711 Msa0443470:intron 45.0%
TCCAAACAAATGCTCTCTGC+AGG - chr3_3:14225741-14225760 Msa0443470:intron 45.0%
CCAAACAAATGCTCTCTGCA+GGG - chr3_3:14225742-14225761 Msa0443470:intron 45.0%
CAGCTGCCAAAGAAGACTTT+GGG + chr3_3:14225891-14225910 None:intergenic 45.0%
CAAAGTCTTCTTTGGCAGCT+GGG - chr3_3:14225890-14225909 Msa0443470:CDS 45.0%
AAAGTCTTCTTTGGCAGCTG+GGG - chr3_3:14225891-14225910 Msa0443470:CDS 45.0%
! ATTGGTTTCAGGCTCTATGG+AGG - chr3_3:14225955-14225974 Msa0443470:intron 45.0%
! GCCACAGAAATCCTGATTTG+TGG - chr3_3:14226076-14226095 Msa0443470:CDS 45.0%
CCCACAAATCAGGATTTCTG+TGG + chr3_3:14226080-14226099 None:intergenic 45.0%
CAACCATCATCCCACAAATC+AGG + chr3_3:14226090-14226109 None:intergenic 45.0%
AAATGCTCGACGTTTGGCAA+AGG - chr3_3:14226796-14226815 Msa0443470:intron 45.0%
GTGGATGCAGAGTTTAAACC+TGG + chr3_3:14226971-14226990 None:intergenic 45.0%
!! ACTGGCTTGCTCTGATTTAG+TGG + chr3_3:14226990-14227009 None:intergenic 45.0%
ACATGGCAGGGGATCTAATA+AGG - chr3_3:14227057-14227076 Msa0443470:intron 45.0%
CTTCTAGGTTCAGAACTGAC+AGG + chr3_3:14227115-14227134 None:intergenic 45.0%
!! CTGTCAGTTCTGAACCTAGA+AGG - chr3_3:14227113-14227132 Msa0443470:intron 45.0%
AATAGTGATAAGGCTCGCAG+TGG - chr3_3:14227235-14227254 Msa0443470:intron 45.0%
CTTGAGACTAGTGATGCCAA+AGG - chr3_3:14227382-14227401 Msa0443470:CDS 45.0%
TTTAGGCATGTGAGACCAGA+AGG - chr3_3:14227406-14227425 Msa0443470:intron 45.0%
CTTTGCAGTCCTTACTTCCA+AGG + chr3_3:14227521-14227540 None:intergenic 45.0%
CTTGGAAGTAAGGACTGCAA+AGG - chr3_3:14227519-14227538 Msa0443470:CDS 45.0%
! TATGGTTGGAAGTATGGCTG+TGG - chr3_3:14227607-14227626 Msa0443470:CDS 45.0%
AAAACACCCAGAGCTTGTGT+TGG - chr3_3:14227690-14227709 Msa0443470:intron 45.0%
GTGGTTAATCTTGCAAGTGG+TGG - chr3_3:14227799-14227818 Msa0443470:intron 45.0%
GTTAATCTTGCAAGTGGTGG+TGG - chr3_3:14227802-14227821 Msa0443470:intron 45.0%
TGCAGCAATCTCAGGTAGAA+TGG - chr3_3:14227892-14227911 Msa0443470:intron 45.0%
!! AGGACAAGCCTTTAAAGCGA+AGG - chr3_3:14228262-14228281 Msa0443470:intron 45.0%
!! GCCTTTAAAGCGAAGGTTAC+TGG - chr3_3:14228269-14228288 Msa0443470:intron 45.0%
GCCGATTGAAAGATGATCGT+GGG - chr3_3:14228295-14228314 Msa0443470:intron 45.0%
GATAGGAGCGACAGAACAAA+TGG - chr3_3:14228333-14228352 Msa0443470:intron 45.0%
AACATCTGCATCGCAACTTC+TGG + chr3_3:14228619-14228638 None:intergenic 45.0%
! CCTGATGGATCATACGAAGA+TGG + chr3_3:14228655-14228674 None:intergenic 45.0%
CCATCTTCGTATGATCCATC+AGG - chr3_3:14228652-14228671 Msa0443470:intron 45.0%
TGCATGCACTAAGCATTCTG+AGG + chr3_3:14228956-14228975 None:intergenic 45.0%
GTGGTGCAGTTATCAAGACT+TGG - chr3_3:14229380-14229399 Msa0443470:intron 45.0%
CATAGACTATCGGAGCTTGT+AGG - chr3_3:14229428-14229447 Msa0443470:intron 45.0%
! GCTTGTAGGTTTCACTGGTT+TGG - chr3_3:14229442-14229461 Msa0443470:intron 45.0%
!! CTGGTTTGGCTCATTGAGAT+TGG - chr3_3:14229456-14229475 Msa0443470:intron 45.0%
ATTATCCACCAAAACCTGGG+AGG + chr3_3:14229698-14229717 None:intergenic 45.0%
CTTATCCCACTAAGTGGGAT+CGG + chr3_3:14229732-14229751 None:intergenic 45.0%
! CAAAGCCTTATCCCACTAAG+TGG + chr3_3:14229738-14229757 None:intergenic 45.0%
TTTGTGGATGTCAGTGACCT+GGG - chr3_3:14229839-14229858 Msa0443470:intron 45.0%
!! AGTGACCTGGGTTTTAATCC+AGG - chr3_3:14229851-14229870 Msa0443470:intron 45.0%
!! ACAAAATATTAAAATATTAT+AGG - chr3_3:14225766-14225785 Msa0443470:intron 5.0%
ATCCGGACTACCTCAAGTGA+TGG - chr3_3:14224123-14224142 Msa0443470:three_prime_UTR 50.0%
!!! TTTTTGGGGTTGGCCACTTG+AGG - chr3_3:14224549-14224568 Msa0443470:intron 50.0%
TCTCCCCACCTCTTAATGGA+GGG - chr3_3:14225030-14225049 Msa0443470:CDS 50.0%
ACACCCCTCCATTAAGAGGT+GGG + chr3_3:14225037-14225056 None:intergenic 50.0%
CTTGGAGGAATTTGACGTGC+GGG - chr3_3:14225660-14225679 Msa0443470:intron 50.0%
TTGGAGGAATTTGACGTGCG+GGG - chr3_3:14225661-14225680 Msa0443470:intron 50.0%
!! CCCTGCAGAGAGCATTTGTT+TGG + chr3_3:14225745-14225764 None:intergenic 50.0%
ACTGAGGGGCTGTTTGAAAG+CGG - chr3_3:14225807-14225826 Msa0443470:intron 50.0%
CCAGCTGCCAAAGAAGACTT+TGG + chr3_3:14225892-14225911 None:intergenic 50.0%
CCAAAGTCTTCTTTGGCAGC+TGG - chr3_3:14225889-14225908 Msa0443470:CDS 50.0%
AAGTCTTCTTTGGCAGCTGG+GGG - chr3_3:14225892-14225911 Msa0443470:CDS 50.0%
TACCTACGCTCAGCTTCAGA+TGG + chr3_3:14226250-14226269 None:intergenic 50.0%
ATACCACTCCGCATCCTTGT+GGG + chr3_3:14226430-14226449 None:intergenic 50.0%
TATACCACTCCGCATCCTTG+TGG + chr3_3:14226431-14226450 None:intergenic 50.0%
GAATTTAGGCAAGCGTGAGG+AGG + chr3_3:14226906-14226925 None:intergenic 50.0%
TCAGAGGAGGAAACAGATGC+CGG - chr3_3:14227019-14227038 Msa0443470:intron 50.0%
GGCCCTGTAGTAATTATCCG+TGG - chr3_3:14227265-14227284 Msa0443470:intron 50.0%
!! CTTAGAGGGTGTTGAGCTAC+TGG - chr3_3:14227306-14227325 Msa0443470:intron 50.0%
ATGTGAGACCAGAAGGAGCA+AGG - chr3_3:14227413-14227432 Msa0443470:intron 50.0%
TCTTCATGCCTTGCTCCTTC+TGG + chr3_3:14227424-14227443 None:intergenic 50.0%
AGCTAAGTCGGGGTCAGAAT+GGG - chr3_3:14227447-14227466 Msa0443470:intron 50.0%
TCCTTACTTCCAAGGGATCC+AGG + chr3_3:14227513-14227532 None:intergenic 50.0%
TGTAGTGATCCTGATGCTCC+TGG - chr3_3:14227855-14227874 Msa0443470:intron 50.0%
ACCTGAGATTGCTGCATGAC+AGG + chr3_3:14227888-14227907 None:intergenic 50.0%
GGCCGATTGAAAGATGATCG+TGG - chr3_3:14228294-14228313 Msa0443470:intron 50.0%
TTGTTCTGTCGCTCCTATCC+TGG + chr3_3:14228332-14228351 None:intergenic 50.0%
TCATGGGATGGCGAACTATC+AGG + chr3_3:14228366-14228385 None:intergenic 50.0%
ATAGTTCGCCATCCCATGAG+AGG - chr3_3:14228367-14228386 Msa0443470:intron 50.0%
GTTTCCCAACTGCCTCTCAT+GGG + chr3_3:14228382-14228401 None:intergenic 50.0%
AGGCATCAAAACTGGAGGAG+GGG + chr3_3:14228466-14228485 None:intergenic 50.0%
CAGGCATCAAAACTGGAGGA+GGG + chr3_3:14228467-14228486 None:intergenic 50.0%
ACAGGCATCAAAACTGGAGG+AGG + chr3_3:14228468-14228487 None:intergenic 50.0%
GGTACAGGCATCAAAACTGG+AGG + chr3_3:14228471-14228490 None:intergenic 50.0%
CCAGGTACAGGCATCAAAAC+TGG + chr3_3:14228474-14228493 None:intergenic 50.0%
!! CCAGTTTTGATGCCTGTACC+TGG - chr3_3:14228471-14228490 Msa0443470:CDS 50.0%
TCTGGTGGAGCAGGAACAAA+GGG + chr3_3:14228601-14228620 None:intergenic 50.0%
TTCTGGTGGAGCAGGAACAA+AGG + chr3_3:14228602-14228621 None:intergenic 50.0%
ATCTGCATCGCAACTTCTGG+TGG + chr3_3:14228616-14228635 None:intergenic 50.0%
GAACGCATCGTCATTCCTGA+TGG + chr3_3:14228670-14228689 None:intergenic 50.0%
TCAGGAATGACGATGCGTTC+TGG - chr3_3:14228670-14228689 Msa0443470:intron 50.0%
ATGCGTTCTGGTCCTCACAT+AGG - chr3_3:14228682-14228701 Msa0443470:intron 50.0%
TGCGTTCTGGTCCTCACATA+GGG - chr3_3:14228683-14228702 Msa0443470:intron 50.0%
GGGAGGAACAGCAATCATAG+AGG + chr3_3:14228716-14228735 None:intergenic 50.0%
ATAAGTACCTCCGCATCCGT+CGG + chr3_3:14228756-14228775 None:intergenic 50.0%
TGGGTGCTCTCCAGTAGAAT+TGG - chr3_3:14229015-14229034 Msa0443470:intron 50.0%
TCGGAGCTTGTAGGTTTCAC+TGG - chr3_3:14229437-14229456 Msa0443470:intron 50.0%
TTCCCGAGCAAAATGCTACC+TGG - chr3_3:14229600-14229619 Msa0443470:intron 50.0%
! AGCCAGGTAGCATTTTGCTC+GGG + chr3_3:14229605-14229624 None:intergenic 50.0%
! CAGCCAGGTAGCATTTTGCT+CGG + chr3_3:14229606-14229625 None:intergenic 50.0%
!! AACTACCTCCCAGGTTTTGG+TGG - chr3_3:14229690-14229709 Msa0443470:intron 50.0%
CGATCCCACTTAGTGGGATA+AGG - chr3_3:14229730-14229749 Msa0443470:intron 50.0%
GTTTGTGGATGTCAGTGACC+TGG - chr3_3:14229838-14229857 Msa0443470:intron 50.0%
GATTGCGCCTTTGCCTAGTC+CGG + chr3_3:14224106-14224125 None:intergenic 55.0%
! GACTAGGCAAAGGCGCAATC+CGG - chr3_3:14224106-14224125 Msa0443470:three_prime_UTR 55.0%
GGCCATCACTTGAGGTAGTC+CGG + chr3_3:14224128-14224147 None:intergenic 55.0%
TTTCTCTCACGTCCCCTGCA+TGG - chr3_3:14224976-14224995 Msa0443470:intron 55.0%
CTCTCCCCACCTCTTAATGG+AGG - chr3_3:14225029-14225048 Msa0443470:CDS 55.0%
CTCCCCACCTCTTAATGGAG+GGG - chr3_3:14225031-14225050 Msa0443470:CDS 55.0%
CACCCCTCCATTAAGAGGTG+GGG + chr3_3:14225036-14225055 None:intergenic 55.0%
CACACCCCTCCATTAAGAGG+TGG + chr3_3:14225038-14225057 None:intergenic 55.0%
GCAGATCTGGATGCCAATCG+CGG - chr3_3:14225261-14225280 Msa0443470:intron 55.0%
TGGAGGAATTTGACGTGCGG+GGG - chr3_3:14225662-14225681 Msa0443470:intron 55.0%
AGTCTTCTTTGGCAGCTGGG+GGG - chr3_3:14225893-14225912 Msa0443470:CDS 55.0%
GGTTTCAGGCTCTATGGAGG+AGG - chr3_3:14225958-14225977 Msa0443470:intron 55.0%
! TGCCATCTGAAGCTGAGCGT+AGG - chr3_3:14226245-14226264 Msa0443470:CDS 55.0%
ATACCCACAAGGATGCGGAG+TGG - chr3_3:14226424-14226443 Msa0443470:CDS 55.0%
CAAGCGTGAGGAGGAAGAGA+AGG + chr3_3:14226897-14226916 None:intergenic 55.0%
AGCCAGTGAGCCCAATTCAG+AGG - chr3_3:14227003-14227022 Msa0443470:intron 55.0%
CTCCTCTGAATTGGGCTCAC+TGG + chr3_3:14227008-14227027 None:intergenic 55.0%
CAGTGAGCCCAATTCAGAGG+AGG - chr3_3:14227006-14227025 Msa0443470:intron 55.0%
CGATTTCTCTGCTGCTCCGA+AGG - chr3_3:14227084-14227103 Msa0443470:intron 55.0%
GAACTGACAGGGTGAGCCTT+CGG + chr3_3:14227103-14227122 None:intergenic 55.0%
TAAGGCTCGCAGTGGATCTG+TGG - chr3_3:14227243-14227262 Msa0443470:intron 55.0%
AAGGCTCGCAGTGGATCTGT+GGG - chr3_3:14227244-14227263 Msa0443470:intron 55.0%
CAGCTAAGTCGGGGTCAGAA+TGG - chr3_3:14227446-14227465 Msa0443470:intron 55.0%
GCCTGGATCCCTTGGAAGTA+AGG - chr3_3:14227509-14227528 Msa0443470:CDS 55.0%
TGCTGCAGCAGCTGACATGT+TGG - chr3_3:14227552-14227571 Msa0443470:CDS 55.0%
AGTGATCCTGATGCTCCTGG+TGG - chr3_3:14227858-14227877 Msa0443470:intron 55.0%
GCCTGTCATGCAGCAATCTC+AGG - chr3_3:14227884-14227903 Msa0443470:intron 55.0%
ATGCTGCTGTCTATGGGGCA+AGG - chr3_3:14228121-14228140 Msa0443470:intron 55.0%
CCATCCCATGAGAGGCAGTT+GGG - chr3_3:14228375-14228394 Msa0443470:intron 55.0%
GGTTTCCCAACTGCCTCTCA+TGG + chr3_3:14228383-14228402 None:intergenic 55.0%
GGCATCAAAACTGGAGGAGG+GGG + chr3_3:14228465-14228484 None:intergenic 55.0%
TTGATGCCTGTACCTGGTGC+CGG - chr3_3:14228477-14228496 Msa0443470:CDS 55.0%
ATCGCAACTTCTGGTGGAGC+AGG + chr3_3:14228610-14228629 None:intergenic 55.0%
GCGTTCTGGTCCTCACATAG+GGG - chr3_3:14228684-14228703 Msa0443470:intron 55.0%
CGTTCTGGTCCTCACATAGG+GGG - chr3_3:14228685-14228704 Msa0443470:intron 55.0%
GGATCAGGTCTAAAGGTGGG+AGG + chr3_3:14228733-14228752 None:intergenic 55.0%
CGGGGATCAGGTCTAAAGGT+GGG + chr3_3:14228736-14228755 None:intergenic 55.0%
TCGGGGATCAGGTCTAAAGG+TGG + chr3_3:14228737-14228756 None:intergenic 55.0%
CCTTTAGACCTGATCCCCGA+CGG - chr3_3:14228737-14228756 Msa0443470:intron 55.0%
TAAGTACCTCCGCATCCGTC+GGG + chr3_3:14228755-14228774 None:intergenic 55.0%
!! GCACTAAGCATTCTGAGGCC+AGG + chr3_3:14228951-14228970 None:intergenic 55.0%
GTGTCCCCCTGGCTGTTGTT+TGG - chr3_3:14225061-14225080 Msa0443470:CDS 60.0%
GAGGGGCTGTTTGAAAGCGG+TGG - chr3_3:14225810-14225829 Msa0443470:intron 60.0%
GAGGAGGAAACAGATGCCGG+TGG - chr3_3:14227022-14227041 Msa0443470:intron 60.0%
GCAGAGAAGGTTGGACAGCC+TGG - chr3_3:14227492-14227511 Msa0443470:intron 60.0%
GTTGGACAGCCTGGATCCCT+TGG - chr3_3:14227501-14227520 Msa0443470:intron 60.0%
TGCATGACAGGCGTTCCACC+AGG + chr3_3:14227876-14227895 None:intergenic 60.0%
GGAATCGGCGAGACCAGGAT+AGG - chr3_3:14228316-14228335 Msa0443470:intron 60.0%
GCCATCCCATGAGAGGCAGT+TGG - chr3_3:14228374-14228393 Msa0443470:intron 60.0%
CCCAACTGCCTCTCATGGGA+TGG + chr3_3:14228378-14228397 None:intergenic 60.0%
TGATGCCTGTACCTGGTGCC+GGG - chr3_3:14228478-14228497 Msa0443470:CDS 60.0%
AGAGAAACCAACCCGGCACC+AGG + chr3_3:14228492-14228511 None:intergenic 60.0%
AGGGTCCCAGAGGCCTGAAT+AGG + chr3_3:14228582-14228601 None:intergenic 60.0%
GCAGGAACAAAGGGTCCCAG+AGG + chr3_3:14228592-14228611 None:intergenic 60.0%
GAGGCTTGTCCCCCTATGTG+AGG + chr3_3:14228697-14228716 None:intergenic 60.0%
CCGTCGGGGATCAGGTCTAA+AGG + chr3_3:14228740-14228759 None:intergenic 60.0%
AAGTACCTCCGCATCCGTCG+GGG + chr3_3:14228754-14228773 None:intergenic 60.0%
GGGGTGTGTTTGTGTCCCCC+TGG - chr3_3:14225050-14225069 Msa0443470:CDS 65.0%
!! TGCCAAGTGGGGGTGCTCGA+AGG - chr3_3:14225295-14225314 Msa0443470:CDS 65.0%
GACCTTCGAGCACCCCCACT+TGG + chr3_3:14225300-14225319 None:intergenic 65.0%
!! GGCGTTCCACCAGGAGCATC+AGG + chr3_3:14227867-14227886 None:intergenic 65.0%
TCGTGGGAATCGGCGAGACC+AGG - chr3_3:14228311-14228330 Msa0443470:intron 65.0%
ACCAACCCGGCACCAGGTAC+AGG + chr3_3:14228486-14228505 None:intergenic 65.0%
GACCTGATCCCCGACGGATG+CGG - chr3_3:14228743-14228762 Msa0443470:intron 65.0%
TCTTTGGCAGCTGGGGGGCC+TGG - chr3_3:14225898-14225917 Msa0443470:intron 70.0%
CTTTGGCAGCTGGGGGGCCT+GGG - chr3_3:14225899-14225918 Msa0443470:intron 70.0%
TTTGGCAGCTGGGGGGCCTG+GGG - chr3_3:14225900-14225919 Msa0443470:intron 70.0%
! GCCTGTACCTGGTGCCGGGT+TGG - chr3_3:14228482-14228501 Msa0443470:CDS 70.0%
CTCCGCATCCGTCGGGGATC+AGG + chr3_3:14228748-14228767 None:intergenic 70.0%
CTGATCCCCGACGGATGCGG+AGG - chr3_3:14228746-14228765 Msa0443470:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 14223852 14229923 14223852 ID=Msa0443470;Name=Msa0443470
chr3_3 mRNA 14223852 14229923 14223852 ID=Msa0443470-mRNA-1;Parent=Msa0443470;Name=Msa0443470-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.72|0.66|0.75|0.81|0.83|12|474|576
chr3_3 exon 14223852 14224386 14223852 ID=Msa0443470-mRNA-1:exon:3200;Parent=Msa0443470-mRNA-1
chr3_3 exon 14225008 14225187 14225008 ID=Msa0443470-mRNA-1:exon:3199;Parent=Msa0443470-mRNA-1
chr3_3 exon 14225276 14225511 14225276 ID=Msa0443470-mRNA-1:exon:3198;Parent=Msa0443470-mRNA-1
chr3_3 exon 14225870 14225915 14225870 ID=Msa0443470-mRNA-1:exon:3197;Parent=Msa0443470-mRNA-1
chr3_3 exon 14226014 14226811 14226014 ID=Msa0443470-mRNA-1:exon:3196;Parent=Msa0443470-mRNA-1
chr3_3 exon 14226920 14226988 14226920 ID=Msa0443470-mRNA-1:exon:3195;Parent=Msa0443470-mRNA-1
chr3_3 exon 14227139 14227186 14227139 ID=Msa0443470-mRNA-1:exon:3194;Parent=Msa0443470-mRNA-1
chr3_3 exon 14227330 14227404 14227330 ID=Msa0443470-mRNA-1:exon:3193;Parent=Msa0443470-mRNA-1
chr3_3 exon 14227509 14227639 14227509 ID=Msa0443470-mRNA-1:exon:3192;Parent=Msa0443470-mRNA-1
chr3_3 exon 14228360 14228381 14228360 ID=Msa0443470-mRNA-1:exon:3191;Parent=Msa0443470-mRNA-1
chr3_3 exon 14228459 14228510 14228459 ID=Msa0443470-mRNA-1:exon:3190;Parent=Msa0443470-mRNA-1
chr3_3 exon 14229911 14229923 14229911 ID=Msa0443470-mRNA-1:exon:3189;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14229911 14229923 14229911 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14228459 14228510 14228459 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14228360 14228381 14228360 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14227509 14227639 14227509 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14227330 14227404 14227330 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14227139 14227186 14227139 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14226920 14226988 14226920 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14226014 14226811 14226014 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14225870 14225915 14225870 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14225276 14225511 14225276 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14225008 14225187 14225008 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 CDS 14224326 14224386 14224326 ID=Msa0443470-mRNA-1:cds;Parent=Msa0443470-mRNA-1
chr3_3 three_prime_UTR 14223852 14224325 14223852 ID=Msa0443470-mRNA-1:three_prime_utr;Parent=Msa0443470-mRNA-1
Gene Sequence

>Msa0443470

ATGGAGATCAATGATCTGGATGCCAATCGCGGTTATGCAGATTTGCCAAGTGGGGGTGCTCGAAGACAACTAATCTCTTCAATGAAGCAATGTGATATTTTGGGGAAAGTCTGTTCACTTGAAGAGCTTGTGAATTATTTCAGAGAGGGGTTGATGTCCTATAAGCAATTCATCCAGGAGCTTGAAGATGATATACTGCCATCTGAAGCTGAGCGTAGATACCAAGAGTACAAGTCAGAGTATATTACTACCCAAAAACGAGCTTATTTCAATACCCACAAGGATGCGGAGTGGTTGAAAGATAAGTATCATCCAACAAATTTACTTACAGTAATTGAAAGGAGGAATGAAAATGCTCGACGTTTGGCAAAGGAGTTTTTGCTTGATTTGCAAAGTGGAGCACTAGACATAAATCCAGGTTTAAACTCTGCATCCACTAAATCAGAGCAAGCCAGTGAGCCCAATTCAGAGGAGGAAACAGATGCCGGTGGTAAAAGAAGAAGACATGGCAGGGGATCTAATAAGGACAACGATTTCTCTGCTGCTCCGAAGGCTCACCCTGTCAGTTCTGAACCTAGAAGGATACAAGAAGATATTCATCAGGTTCAGGCTGTTGTTCGTAAGCTTGACAAGGAAAAAGGGATTGAAGATAATATTTTATGCACTAATGATCATAGTAAAAATAGTGATAAGGCTCGCAGTGGATCTGTGGGCCCTGTAGTAATTATCCGTGGCTTAACATCTATTAAGGGCTTAGAGGGTGTTGAGCTACTGGACACACTTATAACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGAATGCTTGAGACTAGTGATGCCAAAGGTTTTAGGCATGTGAGACCAGAAGGAGCAAGGCATGAAGAAACAGCTAAGTCGGGGTCAGAATGGGAGAAAAAACTTGATTCATTTTGGCAGAGAAGGTTGGACAGCCTGGATCCCTTGGAAGTAAGGACTGCAAAGGAGAAGATAGATGCTGCAGCAGCTGACATGTTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGTTGGAAGTATGGCTGTGGAGCCAAGAGTTGCACAAAGCTTTTTCATGCTGTTGAGTTTGTGTACAAACATCTCAAGCTAAAACACCCAGAGCTTGTGTTGGAATTAACATCAAAATTGCGGGAAGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACGCCTGTCATGCAGCAATCTCAGGACAAGCCTTTAAAGCGAAGGTTACTGGAAGGCCGATTGAAAGATGATCGTGGGAATCGGCGAGACCAGGATAGGAGCGACAGAACAAATGGAGATAGACCTGATAGTTCGCCATCCCATGAGAGGCAGTTGGGAAACCGTGATGAAACAATGTTCGATGCATATGGTGGACCTGCTGTATCATTCAACTCAGATATGCCCCCTCCTCCAGTTTTGATGCCTGTACCTGGTGCCGGGCCTCTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCGATGCAGATGTTTAGGGATCAAGGACCATCTTCGTATGATCCATCAGGAATGACGATGCGTTCTGGTCCTCACATAGGGGGACAAGCCTCTATGATTGCTGTTCCTCCCACCTTTAGACCTGATCCCCGACGGATGCGGAGTTATCAAGACTTGGATGCCCCAGAAGAAGAAGTTACTGTCATAGACTATCGGAGCTTGTAG

Protein sequence

>Msa0443470

MEINDLDANRGYADLPSGGARRQLISSMKQCDILGKVCSLEELVNYFREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHKDAEWLKDKYHPTNLLTVIERRNENARRLAKEFLLDLQSGALDINPGLNSASTKSEQASEPNSEEETDAGGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEKGIEDNILCTNDHSKNSDKARSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLETSDAKGFRHVRPEGARHEETAKSGSEWEKKLDSFWQRRLDSLDPLEVRTAKEKIDAAAADMLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLREDLYFQNYMNDPDAPGGTPVMQQSQDKPLKRRLLEGRLKDDRGNRRDQDRSDRTNGDRPDSSPSHERQLGNRDETMFDAYGGPAVSFNSDMPPPPVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGPSSYDPSGMTMRSGPHIGGQASMIAVPPTFRPDPRRMRSYQDLDAPEEEVTVIDYRSL*