AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0392930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0392930 MtrunA17_Chr3g0078271 99.432 704 3 1 1 703 1 704 0.0 1422
Msa0392930 MtrunA17_Chr8g0355141 78.223 574 109 10 142 703 195 764 0.0 882
Msa0392930 MtrunA17_Chr8g0368211 64.000 75 25 2 403 477 1 73 4.89e-22 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0392930 AT2G27100.1 61.300 646 202 19 84 703 97 720 0.0 696

Find 277 sgRNAs with CRISPR-Local

Find 609 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTTCTCTCCATTTCT+AGG 0.134175 3_2:-6614152 Msa0392930:five_prime_UTR
TCCAGTAACCTTCGCTTTAA+AGG 0.144365 3_2:+6607957 None:intergenic
GCCTTTAAAGCGAAGGTTAC+TGG 0.178081 3_2:-6607958 Msa0392930:CDS
CCGTGGCTTAACATCTATTA+AGG 0.179953 3_2:-6608945 Msa0392930:CDS
ATATCTTCTTGTATCCTTCT+AGG 0.180061 3_2:+6609100 None:intergenic
CGTAAGCTTGACAAGGAAAA+AGG 0.217997 3_2:-6609055 Msa0392930:CDS
ATCTGTTTCCTCCTCTGAAT+TGG 0.232822 3_2:+6609213 None:intergenic
ATGACAGTAACTTCTTCTTC+TGG 0.235175 3_2:+6606813 None:intergenic
TCTTCATGCCTTGCTCCTTC+TGG 0.255229 3_2:+6608806 None:intergenic
GGATATCAAAACGGAATTTC+TGG 0.258959 3_2:-6612407 Msa0392930:intron
AGCAATTTGAAATTATGATT+TGG 0.260525 3_2:+6606307 None:intergenic
ATTCATGGTGTAGATTATTA+TGG 0.272200 3_2:-6608872 Msa0392930:CDS
AAGTTGCGATGCAGATGTTT+AGG 0.279432 3_2:-6607607 Msa0392930:CDS
CTCCTCTGAATTGGGCTCAC+TGG 0.296081 3_2:+6609222 None:intergenic
TAGCGGCGGTCACGATAGTT+AGG 0.305964 3_2:+6613867 None:intergenic
GCAATTTGAAATTATGATTT+GGG 0.312787 3_2:+6606308 None:intergenic
GGCCGAGGTGGCCGCGGCGG+CGG 0.313450 3_2:-6613942 Msa0392930:CDS
TACCTCCCCGGAACAGAAAA+AGG 0.313583 3_2:-6606522 Msa0392930:three_prime_UTR
CTGGTTTGGCTCATTGAGAT+TGG 0.315755 3_2:-6606765 Msa0392930:three_prime_UTR
AAGAAGATGAAGAAATGAAA+TGG 0.316200 3_2:+6614172 None:intergenic
CACCGCCGCCGCGGCCACCT+CGG 0.318151 3_2:+6613940 None:intergenic
GGGTTGGGGTTAGGTGGAGG+TGG 0.324888 3_2:+6614026 None:intergenic
AATTATGTTGGCCTTGTATC+AGG 0.325609 3_2:-6606394 Msa0392930:three_prime_UTR
TGTAATCTAGTTGTAATAAT+GGG 0.326501 3_2:-6606693 Msa0392930:three_prime_UTR
CTGTAATCTAGTTGTAATAA+TGG 0.330615 3_2:-6606694 Msa0392930:three_prime_UTR
ACATGGCAGGGGATCTAATA+AGG 0.335645 3_2:-6609170 Msa0392930:CDS
GAAAAGTATGGTTGGAAGTA+TGG 0.336039 3_2:-6608626 Msa0392930:CDS
CGAGGTGGCCGCGGCGGCGG+TGG 0.341743 3_2:-6613939 Msa0392930:CDS
ACTGGCTTGCTCTGATTTAG+TGG 0.341815 3_2:+6609240 None:intergenic
AGTTGCGATGCAGATGTTTA+GGG 0.344816 3_2:-6607606 Msa0392930:CDS
ACACACTTATAACATATCTT+TGG 0.344912 3_2:-6608898 Msa0392930:CDS
AAATCGCGACGACGAGGGTT+GGG 0.346216 3_2:+6614011 None:intergenic
TCTGTTTCCTCCTCTGAATT+GGG 0.350220 3_2:+6609214 None:intergenic
TGGAGATCGGTCGTGAGATT+CGG 0.351300 3_2:+6614085 None:intergenic
TTCTAATGTTACAACATCTA+TGG 0.354148 3_2:+6606647 None:intergenic
AACATCTATTAAGGGCTTAG+AGG 0.355957 3_2:-6608936 Msa0392930:CDS
GGAGGTGGAGCGGTGGTGGT+TGG 0.356369 3_2:+6614065 None:intergenic
AACATCTGCATCGCAACTTC+TGG 0.357957 3_2:+6607611 None:intergenic
CGCGGCCACCTCGGCCGCCA+CGG 0.360677 3_2:+6613949 None:intergenic
CTCCTGGATGAATTGCTTAT+AGG 0.362268 3_2:+6610021 None:intergenic
GCTTGTAGGTTTCACTGGTT+TGG 0.363855 3_2:-6606779 Msa0392930:exon
ATGAAGAAATGAAATGGGTT+TGG 0.371123 3_2:+6614178 None:intergenic
GAACTGACAGGGTGAGCCTT+TGG 0.371179 3_2:+6609127 None:intergenic
CGTGGCGGCCGAGGTGGCCG+CGG 0.374865 3_2:-6613948 Msa0392930:CDS
GGAATTAACATCAAAATTGC+GGG 0.376005 3_2:-6608516 Msa0392930:CDS
ACATATCTTTGGCGGATTCA+TGG 0.376855 3_2:-6608887 Msa0392930:CDS
CTCCGCATCCGTCGGGGATC+AGG 0.378643 3_2:+6607482 None:intergenic
CATAGACTATCGGAGCTTGT+AGG 0.379735 3_2:-6606793 Msa0392930:exon
CCAGGTACAGGCATCAAAAC+TGG 0.382108 3_2:+6607756 None:intergenic
CGACGACGAGGGTTGGGGTT+AGG 0.385071 3_2:+6614017 None:intergenic
TTGTTCTGTCACTCCTATCC+TGG 0.389177 3_2:+6607898 None:intergenic
ATTACTGTAAGTAAATTTGT+TGG 0.391234 3_2:+6609619 None:intergenic
CGATCCCACTTAGTGGGATA+AGG 0.392410 3_2:-6606473 Msa0392930:three_prime_UTR
CCCCTTCTAGATCTCTTATA+CGG 0.400477 3_2:+6613807 None:intergenic
GGAGATCGGTCGTGAGATTC+GGG 0.400805 3_2:+6614086 None:intergenic
TCAGGAATGACGATGCGTTC+TGG 0.403076 3_2:-6607557 Msa0392930:CDS
TGTTGTGGATAATCAAACTA+TGG 0.406352 3_2:-6606423 Msa0392930:three_prime_UTR
TCATGGGATGGCGAACTATC+AGG 0.408251 3_2:+6607864 None:intergenic
TTCTCTTCTCTCCATTTCTA+GGG 0.409479 3_2:-6614151 Msa0392930:five_prime_UTR
TGACAGTAACTTCTTCTTCT+GGG 0.410350 3_2:+6606814 None:intergenic
TTTATACCTATTCAGGCCTC+TGG 0.412686 3_2:-6607654 Msa0392930:intron
AGAAGATGAAGAAATGAAAT+GGG 0.414047 3_2:+6614173 None:intergenic
GTTAATTCCAACACAAGCTC+TGG 0.415960 3_2:+6608530 None:intergenic
GCCTGGATCCCTTGGAAGTA+AGG 0.418306 3_2:-6608718 Msa0392930:CDS
CACTTATAACATATCTTTGG+CGG 0.418530 3_2:-6608895 Msa0392930:CDS
AAAATTAGGGATGAAAAGTA+TGG 0.418748 3_2:-6608638 Msa0392930:CDS
CGAGGGTTGGGGTTAGGTGG+AGG 0.418872 3_2:+6614023 None:intergenic
ATGAATGGAAACCCTAGAAA+TGG 0.419272 3_2:+6614140 None:intergenic
AGGAGGAGGTGGAGCGGTGG+TGG 0.419667 3_2:+6614061 None:intergenic
CGTGGCTTAACATCTATTAA+GGG 0.420071 3_2:-6608944 Msa0392930:CDS
GCAGAGAAGGTTGGACAGCC+TGG 0.420227 3_2:-6608735 Msa0392930:CDS
CGTCCTCACCGTGGCGGCCG+AGG 0.422279 3_2:-6613957 Msa0392930:CDS
TAAGTACCTCCGCATCCGTC+GGG 0.423656 3_2:+6607475 None:intergenic
AGAAGATATTCATCAGGTTC+AGG 0.424015 3_2:-6609086 Msa0392930:CDS
CTTAGAGGGTGTTGAGCTAC+TGG 0.424649 3_2:-6608921 Msa0392930:CDS
GGCGTTCCACCAGGAGCATC+AGG 0.425251 3_2:+6608363 None:intergenic
GAATGAAAATGCTCGACGTT+TGG 0.427952 3_2:-6609437 Msa0392930:CDS
AGCTAAGTCGGGGTCAGAAT+GGG 0.431013 3_2:-6608780 Msa0392930:CDS
CTTTGCAGTCCTTACTTCCA+AGG 0.431457 3_2:+6608709 None:intergenic
TGAAAGATGATCGTGGGAAT+CGG 0.435042 3_2:-6607926 Msa0392930:CDS
TCCTTACTTCCAAGGGATCC+AGG 0.438671 3_2:+6608717 None:intergenic
GTTTCCATTCATCTCTTCAA+TGG 0.441656 3_2:-6614129 Msa0392930:exon
TGCGTTCTGGTCCTCACATA+GGG 0.441667 3_2:-6607544 Msa0392930:CDS
ACCTGAGATTGCTGCATGAC+AGG 0.446698 3_2:+6608342 None:intergenic
CTGTCAGTTCTGAACCTAGA+AGG 0.448137 3_2:-6609114 Msa0392930:CDS
GTATATCATCTTCAAGCTCC+TGG 0.449728 3_2:+6610005 None:intergenic
GGTTTCCCAACTGCCTCTCA+TGG 0.451422 3_2:+6607847 None:intergenic
GTTTGTGGATGTCAGTGACC+TGG 0.458850 3_2:-6606359 Msa0392930:three_prime_UTR
TCGGAGCTTGTAGGTTTCAC+TGG 0.460462 3_2:-6606784 Msa0392930:exon
GTTGGACAGCCTGGATCCCT+TGG 0.462251 3_2:-6608726 Msa0392930:CDS
TTATGCAATTACCTGTCGTT+AGG 0.463422 3_2:+6613771 None:intergenic
CACTGACATCCACAAACAAT+AGG 0.463690 3_2:+6606365 None:intergenic
CAGCTAAGTCGGGGTCAGAA+TGG 0.467971 3_2:-6608781 Msa0392930:CDS
TTGATGCCTGTACCTGGTGC+CGG 0.468596 3_2:-6607750 Msa0392930:CDS
TGATGCCTGTACCTGGTGCC+GGG 0.471237 3_2:-6607749 Msa0392930:intron
CGACGAGACTGCTGCGGAGG+AGG 0.471743 3_2:+6613840 None:intergenic
CATGAAGAAACAGCTAAGTC+GGG 0.472186 3_2:-6608791 Msa0392930:CDS
TATGATTTGTGCAGAAATCC+AGG 0.472977 3_2:-6609277 Msa0392930:intron
CGATTTCTCTGCTGCTCCAA+AGG 0.475184 3_2:-6609143 Msa0392930:CDS
GGAGGTGGGAGATCGTCGTC+AGG 0.475713 3_2:+6614041 None:intergenic
CGCCGTATAAGAGATCTAGA+AGG 0.476081 3_2:-6613809 Msa0392930:CDS
GCCTGTCATGCAGCAATCTC+AGG 0.476952 3_2:-6608343 Msa0392930:intron
ATCGCAACTTCTGGTGGAGC+AGG 0.479254 3_2:+6607620 None:intergenic
TCTCACATGCCTAAAACCTT+TGG 0.481229 3_2:+6608829 None:intergenic
TCCCACGATCATCTTTCAAT+CGG 0.481981 3_2:+6607931 None:intergenic
GTGGATGCAGAGTTTAAACC+TGG 0.485312 3_2:+6609259 None:intergenic
GGCAGATTTCCACATCGATC+TGG 0.487532 3_2:-6612434 Msa0392930:CDS
GATAGGAGTGACAGAACAAA+TGG 0.489165 3_2:-6607894 Msa0392930:CDS
TGTAGTGATCCTGATGCTCC+TGG 0.490637 3_2:-6608372 Msa0392930:intron
CCATCCCATGAGAGGCAGTT+GGG 0.495045 3_2:-6607852 Msa0392930:CDS
ATACCACTCCGCATCCTTGT+GGG 0.495435 3_2:+6609800 None:intergenic
TATGAACGTGGAGGTGGAAG+GGG 0.497685 3_2:-6612482 Msa0392930:CDS
TCGTGGGAATCGGCGAGACC+AGG 0.497837 3_2:-6607916 Msa0392930:CDS
CCATCTTCGTATGATCCATC+AGG 0.498285 3_2:-6607575 Msa0392930:CDS
GGTTGGGGTTAGGTGGAGGT+GGG 0.500708 3_2:+6614027 None:intergenic
CTCGGCCGCCACGGTGAGGA+CGG 0.500922 3_2:+6613958 None:intergenic
CATAGCCACCGAAGTGATCA+TGG 0.502264 3_2:+6612501 None:intergenic
CCCGAGCAAAATATGCTACC+TGG 0.502408 3_2:-6606619 Msa0392930:three_prime_UTR
GGCGGCCGAGGTGGCCGCGG+CGG 0.503914 3_2:-6613945 Msa0392930:CDS
GCATGAAGAAACAGCTAAGT+CGG 0.504054 3_2:-6608792 Msa0392930:CDS
TATATTCCGATCCCACTTAG+TGG 0.504498 3_2:-6606480 Msa0392930:three_prime_UTR
TTTGCAGTCCTTACTTCCAA+GGG 0.506157 3_2:+6608710 None:intergenic
GAGCGGTGGTGGTTGGAGAT+CGG 0.506162 3_2:+6614072 None:intergenic
ATGCGTTCTGGTCCTCACAT+AGG 0.506680 3_2:-6607545 Msa0392930:CDS
GGCATCAAAACTGGAGGAGG+GGG 0.507533 3_2:+6607765 None:intergenic
CAAATCTGCATAACCGCGAT+TGG 0.508789 3_2:+6610953 None:intergenic
TTTAGGCATGTGAGACCAGA+AGG 0.513433 3_2:-6608821 Msa0392930:CDS
GAAATCGCGACGACGAGGGT+TGG 0.514577 3_2:+6614010 None:intergenic
ATGCAGATGTTTAGGGATCA+AGG 0.515375 3_2:-6607599 Msa0392930:CDS
ATCTGCATCGCAACTTCTGG+TGG 0.515886 3_2:+6607614 None:intergenic
ACCAACCCGGCACCAGGTAC+AGG 0.516357 3_2:+6607744 None:intergenic
AATCGCGACGACGAGGGTTG+GGG 0.517751 3_2:+6614012 None:intergenic
AGATCGTCGTCAGGAGGAGG+TGG 0.519392 3_2:+6614050 None:intergenic
CTATGAACGTGGAGGTGGAA+GGG 0.520781 3_2:-6612483 Msa0392930:CDS
GGGAGATCGTCGTCAGGAGG+AGG 0.522110 3_2:+6614047 None:intergenic
GTTATGCAGATTTGCCAAGT+GGG 0.524038 3_2:-6610944 Msa0392930:CDS
TGCATGACAGGCGTTCCACC+AGG 0.524219 3_2:+6608354 None:intergenic
GATACAAGAAGATATTCATC+AGG 0.525306 3_2:-6609092 Msa0392930:CDS
TGGAATTAACATCAAAATTG+CGG 0.525419 3_2:-6608517 Msa0392930:CDS
GCTATGAACGTGGAGGTGGA+AGG 0.526026 3_2:-6612484 Msa0392930:CDS
CCCAACTGCCTCTCATGGGA+TGG 0.526209 3_2:+6607852 None:intergenic
TATACTCTGACTTGTACTCT+TGG 0.527237 3_2:+6609853 None:intergenic
GAAACAATGTTCGATGCATA+TGG 0.530275 3_2:-6607819 Msa0392930:CDS
TTGGCTCATTGAGATTGGAT+TGG 0.531912 3_2:-6606760 Msa0392930:three_prime_UTR
TCTGGTGGAGCAGGAACAAA+GGG 0.532051 3_2:+6607629 None:intergenic
GGTGGCTATGAACGTGGAGG+TGG 0.532372 3_2:-6612488 Msa0392930:CDS
TTAGGGATGAAAAGTATGGT+TGG 0.532966 3_2:-6608634 Msa0392930:CDS
CTTCTAGGTTCAGAACTGAC+AGG 0.537567 3_2:+6609115 None:intergenic
TAAGGCTCGCAGTGGATCTG+TGG 0.539326 3_2:-6608984 Msa0392930:CDS
TACCTGTCGTTAGGTCTATG+AGG 0.541014 3_2:+6613780 None:intergenic
AAGCCACGGATAATTACTAC+AGG 0.543566 3_2:+6608959 None:intergenic
TTTGTGGATGTCAGTGACCT+GGG 0.544843 3_2:-6606358 Msa0392930:three_prime_UTR
ACAGGCATCAAAACTGGAGG+AGG 0.544938 3_2:+6607762 None:intergenic
GAACGTGGAGGTGGAAGGGG+TGG 0.546875 3_2:-6612479 Msa0392930:CDS
CCGTCGGGGATCAGGTCTAA+AGG 0.547560 3_2:+6607490 None:intergenic
GAACGCATCGTCATTCCTGA+TGG 0.548956 3_2:+6607560 None:intergenic
CGGTCACGATAGTTAGGGCT+AGG 0.549799 3_2:+6613873 None:intergenic
TCGGCCATTGAAGAGATGAA+TGG 0.551754 3_2:+6614125 None:intergenic
GACCTGATCCCCGACGGATG+CGG 0.552652 3_2:-6607484 Msa0392930:CDS
CAAAGCCTTATCCCACTAAG+TGG 0.552931 3_2:+6606468 None:intergenic
ACATCTATTAAGGGCTTAGA+GGG 0.553584 3_2:-6608935 Msa0392930:CDS
GTTTCCCAACTGCCTCTCAT+GGG 0.553750 3_2:+6607848 None:intergenic
TTTCAATACCCACAAGGATG+CGG 0.555795 3_2:-6609808 Msa0392930:CDS
AGAGAAACCAACCCGGCACC+AGG 0.556392 3_2:+6607738 None:intergenic
TATACCACTCCGCATCCTTG+TGG 0.557388 3_2:+6609799 None:intergenic
CTAGATCTCTTATACGGCGG+AGG 0.558280 3_2:+6613813 None:intergenic
CCTCACCGTGGCGGCCGAGG+TGG 0.560575 3_2:-6613954 Msa0392930:CDS
CCTGATGGATCATACGAAGA+TGG 0.561638 3_2:+6607575 None:intergenic
TTATACCTATTCAGGCCTCT+GGG 0.561914 3_2:-6607653 Msa0392930:intron
AGGACAAGCCTTTAAAGCGA+AGG 0.563691 3_2:-6607965 Msa0392930:CDS
GCCATCCCATGAGAGGCAGT+TGG 0.567581 3_2:-6607853 Msa0392930:CDS
TTCTGGTGGAGCAGGAACAA+AGG 0.568203 3_2:+6607628 None:intergenic
GTAAAAGAAGAAGACATGGC+AGG 0.568918 3_2:-6609183 Msa0392930:CDS
ATTTACTTACAGTAATTGAA+AGG 0.571034 3_2:-6609612 Msa0392930:intron
CGATGTGGAAATCTGCCACC+AGG 0.571313 3_2:+6612440 None:intergenic
CTTCTAGATCTCTTATACGG+CGG 0.571503 3_2:+6613810 None:intergenic
TTATGCAGATTTGCCAAGTG+GGG 0.573070 3_2:-6610943 Msa0392930:CDS
CTTATCCCACTAAGTGGGAT+CGG 0.573648 3_2:+6606474 None:intergenic
GTCCTATAAGCAATTCATCC+AGG 0.574466 3_2:-6610023 Msa0392930:CDS
TGCTGCAGCAGCTGACATGT+TGG 0.575171 3_2:-6608675 Msa0392930:CDS
GCCGTATAAGAGATCTAGAA+GGG 0.575206 3_2:-6613808 Msa0392930:CDS
CGAAATCTCTGTCGTCTCGA+CGG 0.577882 3_2:+6613985 None:intergenic
GACAGTAACTTCTTCTTCTG+GGG 0.578270 3_2:+6606815 None:intergenic
ATAAGTACCTCCGCATCCGT+CGG 0.578460 3_2:+6607474 None:intergenic
GGAATCGGCGAGACCAGGAT+AGG 0.578499 3_2:-6607911 Msa0392930:CDS
GTAATCTAGTTGTAATAATG+GGG 0.578512 3_2:-6606692 Msa0392930:three_prime_UTR
AGCCAGTGAGCCCAATTCAG+AGG 0.578683 3_2:-6609224 Msa0392930:CDS
CATCGAACATTGTTTCATCA+CGG 0.580490 3_2:+6607826 None:intergenic
TAAAAGAAGAAGACATGGCA+GGG 0.583889 3_2:-6609182 Msa0392930:CDS
GAACGACGAGACTGCTGCGG+AGG 0.585310 3_2:+6613837 None:intergenic
AAGTTACTGTCATAGACTAT+CGG 0.585625 3_2:-6606803 Msa0392930:CDS
GCCGATTGAAAGATGATCGT+GGG 0.585756 3_2:-6607932 Msa0392930:CDS
AGCGGCGGTCACGATAGTTA+GGG 0.586078 3_2:+6613868 None:intergenic
ATGTGAGACCAGAAGGAGCA+AGG 0.587740 3_2:-6608814 Msa0392930:CDS
GTCAGGAGGAGGTGGAGCGG+TGG 0.588117 3_2:+6614058 None:intergenic
CTATGGTTAAGAAATTATGT+TGG 0.588408 3_2:-6606406 Msa0392930:three_prime_UTR
TCTGAGTTGAATGATACAGC+AGG 0.589557 3_2:+6607792 None:intergenic
CACTTCGGTGGCTATGAACG+TGG 0.590987 3_2:-6612494 Msa0392930:CDS
CCACCTCGGCCGCCACGGTG+AGG 0.591302 3_2:+6613954 None:intergenic
AAGGCTCGCAGTGGATCTGT+GGG 0.592274 3_2:-6608983 Msa0392930:CDS
AAATGCTCGACGTTTGGCAA+AGG 0.592998 3_2:-6609431 Msa0392930:CDS
TCAGAGGAGGAAACAGATGC+TGG 0.593610 3_2:-6609208 Msa0392930:CDS
ATATTCCGATCCCACTTAGT+GGG 0.594647 3_2:-6606479 Msa0392930:three_prime_UTR
TTTCCACATCGATCTGGAGG+GGG 0.594827 3_2:-6612428 Msa0392930:CDS
TACCTACGCTCAGCTTCAGA+TGG 0.594958 3_2:+6609980 None:intergenic
GGTCGTGAGATTCGGGAGGG+AGG 0.595215 3_2:+6614093 None:intergenic
CGGGGATCAGGTCTAAAGGT+GGG 0.597507 3_2:+6607494 None:intergenic
TTAATTCCAACACAAGCTCT+GGG 0.597647 3_2:+6608531 None:intergenic
TATGCAGATTTGCCAAGTGG+GGG 0.600967 3_2:-6610942 Msa0392930:CDS
AGATTTCCACATCGATCTGG+AGG 0.603786 3_2:-6612431 Msa0392930:CDS
GGTGGGAGATCGTCGTCAGG+AGG 0.604290 3_2:+6614044 None:intergenic
CGACGAGGGTTGGGGTTAGG+TGG 0.605859 3_2:+6614020 None:intergenic
ATAGGAAAAGACCTGATACA+AGG 0.607113 3_2:+6606383 None:intergenic
TCGGGGATCAGGTCTAAAGG+TGG 0.610998 3_2:+6607493 None:intergenic
GGCCGCCACGGTGAGGACGG+CGG 0.613259 3_2:+6613961 None:intergenic
GGCGTTTGATGTCTCTATCA+CGG 0.614422 3_2:+6613904 None:intergenic
AAAACACCCAGAGCTTGTGT+TGG 0.614464 3_2:-6608537 Msa0392930:CDS
CTGATCCCCGACGGATGCGG+AGG 0.614753 3_2:-6607481 Msa0392930:intron
CAGGCATCAAAACTGGAGGA+GGG 0.615388 3_2:+6607763 None:intergenic
GTCCTCATAGACCTAACGAC+AGG 0.615608 3_2:-6613782 Msa0392930:intron
GGTTATGCAGATTTGCCAAG+TGG 0.618297 3_2:-6610945 Msa0392930:CDS
ATTTCCACATCGATCTGGAG+GGG 0.621278 3_2:-6612429 Msa0392930:CDS
TTTGACCTAGATTAAAACCC+AGG 0.621387 3_2:+6606341 None:intergenic
GTCGTCAGGAGGAGGTGGAG+CGG 0.622070 3_2:+6614055 None:intergenic
TTTGGCCATGATCACTTCGG+TGG 0.625230 3_2:-6612506 Msa0392930:CDS
GTGGTGCAGTTATCAAGACT+TGG 0.626723 3_2:-6606841 Msa0392930:intron
AGTGATCCTGATGCTCCTGG+TGG 0.627928 3_2:-6608369 Msa0392930:CDS
GGAGAACGACGAGACTGCTG+CGG 0.631420 3_2:+6613834 None:intergenic
GGTCGAAATCGCGACGACGA+GGG 0.633423 3_2:+6614006 None:intergenic
CCTTTAGACCTGATCCCCGA+CGG 0.633767 3_2:-6607490 Msa0392930:CDS
GATTTCCACATCGATCTGGA+GGG 0.634289 3_2:-6612430 Msa0392930:CDS
AGGTTTGGCCATGATCACTT+CGG 0.635013 3_2:-6612509 Msa0392930:CDS
AAGTACCTCCGCATCCGTCG+GGG 0.635573 3_2:+6607476 None:intergenic
GACCGCCGTCCTCACCGTGG+CGG 0.636148 3_2:-6613963 Msa0392930:CDS
GGCCGATTGAAAGATGATCG+TGG 0.636197 3_2:-6607933 Msa0392930:CDS
TATGGTTGGAAGTATGGCTG+TGG 0.637523 3_2:-6608620 Msa0392930:CDS
ATAGTTCGCCATCCCATGAG+AGG 0.637985 3_2:-6607860 Msa0392930:CDS
TTAAAGCGAAGGTTACTGGA+AGG 0.638659 3_2:-6607954 Msa0392930:CDS
CCTTAATAGATGTTAAGCCA+CGG 0.640737 3_2:+6608945 None:intergenic
CAGTGAGCCCAATTCAGAGG+AGG 0.641145 3_2:-6609221 Msa0392930:CDS
CGTTCTGGTCCTCACATAGG+GGG 0.645123 3_2:-6607542 Msa0392930:CDS
GCGTTCTGGTCCTCACATAG+GGG 0.645525 3_2:-6607543 Msa0392930:CDS
CTTGAGACTAGTGATGCCAA+AGG 0.645562 3_2:-6608845 Msa0392930:CDS
GCAGATCTGGATGCCAATCG+CGG 0.645963 3_2:-6610966 Msa0392930:intron
CTTGGAAGTAAGGACTGCAA+AGG 0.649139 3_2:-6608708 Msa0392930:CDS
TGTTGTTCGTAAGCTTGACA+AGG 0.650753 3_2:-6609062 Msa0392930:CDS
GGGAGGAACAGCAATCATAG+AGG 0.652456 3_2:+6607514 None:intergenic
AAAGCCTTATCCCACTAAGT+GGG 0.653056 3_2:+6606469 None:intergenic
TTCTAGGTTCAGAACTGACA+GGG 0.653359 3_2:+6609116 None:intergenic
GGCTATGCAGATGATAGACC+TGG 0.653573 3_2:-6612458 Msa0392930:CDS
AGGCATCAAAACTGGAGGAG+GGG 0.658058 3_2:+6607764 None:intergenic
AATAGTGATAAGGCTCGCAG+TGG 0.662545 3_2:-6608992 Msa0392930:CDS
TAATCTAGTTGTAATAATGG+GGG 0.662924 3_2:-6606691 Msa0392930:three_prime_UTR
CGGTCGAAATCGCGACGACG+AGG 0.663606 3_2:+6614005 None:intergenic
AGCTTATTTCAATACCCACA+AGG 0.664399 3_2:-6609814 Msa0392930:CDS
TGTAGTAACCACCGCCGCCG+CGG 0.664696 3_2:+6613931 None:intergenic
GGCCCTGTAGTAATTATCCG+TGG 0.666056 3_2:-6608962 Msa0392930:CDS
GCTGCGGAGGAGGAGAATAG+CGG 0.667835 3_2:+6613850 None:intergenic
TGCCATCTGAAGCTGAGCGT+AGG 0.669466 3_2:-6609982 Msa0392930:intron
GATCGGTCGTGAGATTCGGG+AGG 0.670604 3_2:+6614089 None:intergenic
AAAAGAAGAAGACATGGCAG+GGG 0.670768 3_2:-6609181 Msa0392930:CDS
ATCGGTCGTGAGATTCGGGA+GGG 0.670933 3_2:+6614090 None:intergenic
ACAATGTTCGATGCATATGG+TGG 0.677228 3_2:-6607816 Msa0392930:CDS
GGTGGTAAAAGAAGAAGACA+TGG 0.677981 3_2:-6609187 Msa0392930:CDS
ATGAAGAAACAGCTAAGTCG+GGG 0.681698 3_2:-6608790 Msa0392930:CDS
GGATCAGGTCTAAAGGTGGG+AGG 0.688645 3_2:+6607497 None:intergenic
GAGGAGGAAACAGATGCTGG+TGG 0.689092 3_2:-6609205 Msa0392930:CDS
GCGGAGGAGGAGAATAGCGG+CGG 0.691138 3_2:+6613853 None:intergenic
TTCGGTGGCTATGAACGTGG+AGG 0.692988 3_2:-6612491 Msa0392930:CDS
GCAGGAACAAAGGGTCCCAG+AGG 0.699153 3_2:+6607638 None:intergenic
GGTACAGGCATCAAAACTGG+AGG 0.702355 3_2:+6607759 None:intergenic
TTCGACCGCCGTCCTCACCG+TGG 0.713062 3_2:-6613966 Msa0392930:CDS
CCGTATAAGAGATCTAGAAG+GGG 0.715875 3_2:-6613807 Msa0392930:CDS
ATACCCACAAGGATGCGGAG+TGG 0.729545 3_2:-6609803 Msa0392930:intron
AGCCACGGATAATTACTACA+GGG 0.753218 3_2:+6608960 None:intergenic
TATGCAGATGATAGACCTGG+TGG 0.763982 3_2:-6612455 Msa0392930:CDS
AGTTAGGGCTAGGACTACGA+CGG 0.787338 3_2:+6613883 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAATTGCATTTAT+AGG + chr3_2:6608210-6608229 None:intergenic 10.0%
!! TAAAATAAAAAAATCAATAG+AGG + chr3_2:6608975-6608994 None:intergenic 10.0%
!! NNNNNNNNNNAAAACAGTAT+TGG + chr3_2:6609231-6609250 None:intergenic 10.0%
!!! TTAATATGTTTTTTATGTTA+TGG - chr3_2:6609538-6609557 Msa0392930:intron 10.0%
!!! TAATATGTTTTTTATGTTAT+GGG - chr3_2:6609539-6609558 Msa0392930:intron 10.0%
!! ATAAACAAAAAAATTTGATT+TGG + chr3_2:6613139-6613158 None:intergenic 10.0%
!! TAAAATACAATAAAATAACA+TGG + chr3_2:6613247-6613266 None:intergenic 10.0%
!! AATTAATCGTTTATTAATTG+AGG - chr3_2:6606801-6606820 Msa0392930:CDS 15.0%
!!! TAATTGATAGCATTTAATTT+AGG - chr3_2:6606834-6606853 Msa0392930:CDS 15.0%
!!! AATTGATAGCATTTAATTTA+GGG - chr3_2:6606835-6606854 Msa0392930:CDS 15.0%
!!! TCTTTTGAATAATTGTTTAT+TGG - chr3_2:6607114-6607133 Msa0392930:intron 15.0%
!!! CTTTTGAATAATTGTTTATT+GGG - chr3_2:6607115-6607134 Msa0392930:intron 15.0%
!!! ATAAAATTTGTGATAATGTT+TGG - chr3_2:6607215-6607234 Msa0392930:intron 15.0%
!!! TAAAATTTGTGATAATGTTT+GGG - chr3_2:6607216-6607235 Msa0392930:intron 15.0%
!!! AATTTGAAATAAGTTTTATC+TGG + chr3_2:6607296-6607315 None:intergenic 15.0%
!!! ATTTCAAATAAGTTTTATCT+TGG + chr3_2:6607350-6607369 None:intergenic 15.0%
!! TAAAATACATACTGAATTAT+GGG + chr3_2:6608733-6608752 None:intergenic 15.0%
!! ATAAAATACATACTGAATTA+TGG + chr3_2:6608734-6608753 None:intergenic 15.0%
!! TAAATCTTGATCAATTAATT+GGG - chr3_2:6609436-6609455 Msa0392930:CDS 15.0%
!!! TATGTATAAATTTCCTTTTA+GGG - chr3_2:6609500-6609519 Msa0392930:intron 15.0%
!!! AATTTTCAAATATTCTTAGA+TGG - chr3_2:6609822-6609841 Msa0392930:CDS 15.0%
!! TTTAGATCAAAATCAATTAA+CGG + chr3_2:6610877-6610896 None:intergenic 15.0%
!! TATATAATTTATACCTATTC+AGG - chr3_2:6612885-6612904 Msa0392930:intron 15.0%
!! ACATAAAAAATAGTATGATT+TGG + chr3_2:6613183-6613202 None:intergenic 15.0%
!! TCTAAAAATCACATAAAAAA+GGG + chr3_2:6613207-6613226 None:intergenic 15.0%
!!! TTATTTTATTGTATTTTACC+TGG - chr3_2:6613249-6613268 Msa0392930:intron 15.0%
!! ACTTATTTGAATTTATCTAC+TGG - chr3_2:6607191-6607210 Msa0392930:intron 20.0%
!!! TCATGTACTTAATTTTTCAT+GGG - chr3_2:6607668-6607687 Msa0392930:intron 20.0%
!!! TGTTTGTTGTATAATGTAAA+AGG - chr3_2:6607714-6607733 Msa0392930:intron 20.0%
!!! TTTAAAGTCATGTATTTGAT+TGG - chr3_2:6607836-6607855 Msa0392930:CDS 20.0%
!!! TCTTTTCTTGTTTTTATGTT+AGG - chr3_2:6608326-6608345 Msa0392930:intron 20.0%
!!! CTTTTCTTGTTTTTATGTTA+GGG - chr3_2:6608327-6608346 Msa0392930:intron 20.0%
!!! TTTTCTTGTTTTTATGTTAG+GGG - chr3_2:6608328-6608347 Msa0392930:intron 20.0%
!! TAAAATACTTCTGTAGTAAA+AGG - chr3_2:6608865-6608884 Msa0392930:CDS 20.0%
!! CTAAATCTTGATCAATTAAT+TGG - chr3_2:6609435-6609454 Msa0392930:CDS 20.0%
!!! GTATGTATAAATTTCCTTTT+AGG - chr3_2:6609499-6609518 Msa0392930:intron 20.0%
!!! TTTTTATGTTATGGGTTTTA+TGG - chr3_2:6609547-6609566 Msa0392930:intron 20.0%
!!! TTTTATGTTATGGGTTTTAT+GGG - chr3_2:6609548-6609567 Msa0392930:intron 20.0%
!!! TTTCTCTTTTGTTTTTCATT+TGG - chr3_2:6610300-6610319 Msa0392930:intron 20.0%
!! ATTACTGTAAGTAAATTTGT+TGG + chr3_2:6610930-6610949 None:intergenic 20.0%
!! ATTTACTTACAGTAATTGAA+AGG - chr3_2:6610934-6610953 Msa0392930:CDS 20.0%
!! TAATTATATTCAATCCTATC+TGG - chr3_2:6611068-6611087 Msa0392930:intron 20.0%
!! TCTCATAATTCAATGAATTT+AGG + chr3_2:6611239-6611258 None:intergenic 20.0%
!! TCATAGTAAAAATAGTGATA+AGG - chr3_2:6611544-6611563 Msa0392930:intron 20.0%
!!! AGAAAAAACTTGATTCATTT+TGG - chr3_2:6611789-6611808 Msa0392930:intron 20.0%
!! ATCCATATGTTAGAAAAATT+AGG - chr3_2:6611894-6611913 Msa0392930:intron 20.0%
!! TCCATATGTTAGAAAAATTA+GGG - chr3_2:6611895-6611914 Msa0392930:intron 20.0%
!! AACCACTAAACAAAAATAAA+AGG + chr3_2:6612104-6612123 None:intergenic 20.0%
!! CTTCTAGATATAAAATTGTA+TGG + chr3_2:6612249-6612268 None:intergenic 20.0%
!!! TACAATTAAAAGCTTTATTG+AGG - chr3_2:6612850-6612869 Msa0392930:intron 20.0%
!!! CTCTAAAAATCACATAAAAA+AGG + chr3_2:6613208-6613227 None:intergenic 20.0%
!!! ATAAAGTTGATTGACATTTT+GGG - chr3_2:6613315-6613334 Msa0392930:intron 20.0%
!!! TCAATTTTATAAAACACATG+TGG - chr3_2:6613515-6613534 Msa0392930:intron 20.0%
!! TGGATTATTAAAATAACATG+TGG - chr3_2:6613535-6613554 Msa0392930:intron 20.0%
!! ATTATTAAAATAACATGTGG+TGG - chr3_2:6613538-6613557 Msa0392930:intron 20.0%
!! TTATTAAAATAACATGTGGT+GGG - chr3_2:6613539-6613558 Msa0392930:intron 20.0%
!!! TAATTTTAGTCAACTATACT+TGG - chr3_2:6613823-6613842 Msa0392930:CDS 20.0%
!! TGTAATCTAGTTGTAATAAT+GGG - chr3_2:6613853-6613872 Msa0392930:CDS 20.0%
!!! GCAATTTGAAATTATGATTT+GGG + chr3_2:6614241-6614260 None:intergenic 20.0%
!!! AGCAATTTGAAATTATGATT+TGG + chr3_2:6614242-6614261 None:intergenic 20.0%
! AGAAGATGAAGAAATGAAAT+GGG + chr3_2:6606376-6606395 None:intergenic 25.0%
! AAGAAGATGAAGAAATGAAA+TGG + chr3_2:6606377-6606396 None:intergenic 25.0%
!! ATAGCATTTAATTTAGGGTT+AGG - chr3_2:6606840-6606859 Msa0392930:intron 25.0%
! ATTTATACGAACTGTAGATT+AGG - chr3_2:6606867-6606886 Msa0392930:intron 25.0%
! TTTATACGAACTGTAGATTA+GGG - chr3_2:6606868-6606887 Msa0392930:intron 25.0%
!! TTTGTCTTTTCCAATAGAAA+TGG - chr3_2:6607457-6607476 Msa0392930:intron 25.0%
! ATAAGTTGTTTATCCAAACA+GGG - chr3_2:6607513-6607532 Msa0392930:CDS 25.0%
! ATAAAGTAGTCAGTTACAAT+TGG + chr3_2:6607618-6607637 None:intergenic 25.0%
! ACTGACTACTTTATAATGAA+AGG - chr3_2:6607624-6607643 Msa0392930:CDS 25.0%
!! GTCATGTACTTAATTTTTCA+TGG - chr3_2:6607667-6607686 Msa0392930:intron 25.0%
! GCAAAGAAAACAAATAATAC+AGG + chr3_2:6607943-6607962 None:intergenic 25.0%
! ATGTATCAGTAAACAATGAT+GGG + chr3_2:6608284-6608303 None:intergenic 25.0%
! TATGTATCAGTAAACAATGA+TGG + chr3_2:6608285-6608304 None:intergenic 25.0%
! AAATTGTACAGAAAATGTCT+GGG - chr3_2:6608458-6608477 Msa0392930:intron 25.0%
! AACAACAATCACATTTGATT+GGG + chr3_2:6608596-6608615 None:intergenic 25.0%
! AAACAACAATCACATTTGAT+TGG + chr3_2:6608597-6608616 None:intergenic 25.0%
!!! ATCAAATGTGATTGTTGTTT+TGG - chr3_2:6608597-6608616 Msa0392930:CDS 25.0%
!! TTTAGTCTATTCAGTGTTTT+TGG - chr3_2:6608761-6608780 Msa0392930:CDS 25.0%
!! TTAGTCTATTCAGTGTTTTT+GGG - chr3_2:6608762-6608781 Msa0392930:CDS 25.0%
!! ATTTTATTCTTTTCTCCTGA+TGG - chr3_2:6608994-6609013 Msa0392930:CDS 25.0%
! TGTAATATTGAGACATTCAA+TGG - chr3_2:6609076-6609095 Msa0392930:CDS 25.0%
!! CAAGATTTAGAACTAGATAA+CGG + chr3_2:6609425-6609444 None:intergenic 25.0%
! TTCAAAGAAATACATGATAC+AGG + chr3_2:6609688-6609707 None:intergenic 25.0%
! TAATGTTCCAATATCTTGAA+TGG - chr3_2:6609845-6609864 Msa0392930:CDS 25.0%
! AATGTTCCAATATCTTGAAT+GGG - chr3_2:6609846-6609865 Msa0392930:CDS 25.0%
! CTTGTATAATCACTATAACA+AGG + chr3_2:6609892-6609911 None:intergenic 25.0%
!! CTTGTTATAGTGATTATACA+AGG - chr3_2:6609890-6609909 Msa0392930:intron 25.0%
!! AACTTAGCAATGTGATATTT+TGG - chr3_2:6610448-6610467 Msa0392930:intron 25.0%
!! ACTTAGCAATGTGATATTTT+GGG - chr3_2:6610449-6610468 Msa0392930:intron 25.0%
!!! ATTGAAATAAGCTCGTTTTT+GGG + chr3_2:6610725-6610744 None:intergenic 25.0%
!! TATTGAAATAAGCTCGTTTT+TGG + chr3_2:6610726-6610745 None:intergenic 25.0%
! TTTGATCTAAACTTTGATGT+AGG - chr3_2:6610886-6610905 Msa0392930:intron 25.0%
! ACACACTTATAACATATCTT+TGG - chr3_2:6611648-6611667 Msa0392930:intron 25.0%
! ATTCATGGTGTAGATTATTA+TGG - chr3_2:6611674-6611693 Msa0392930:intron 25.0%
!! TCCCTAATTTTTCTAACATA+TGG + chr3_2:6611899-6611918 None:intergenic 25.0%
! AAAATTAGGGATGAAAAGTA+TGG - chr3_2:6611908-6611927 Msa0392930:intron 25.0%
! TGGAATTAACATCAAAATTG+CGG - chr3_2:6612029-6612048 Msa0392930:intron 25.0%
!!! AGCCTTTTATTTTTGTTTAG+TGG - chr3_2:6612099-6612118 Msa0392930:intron 25.0%
!!! CACATGTTTTGAAAACATTT+TGG - chr3_2:6612313-6612332 Msa0392930:intron 25.0%
! GCTTGTAAAATCCTATATTA+AGG + chr3_2:6612350-6612369 None:intergenic 25.0%
! AAGGGAACATATATAAACAA+GGG + chr3_2:6613107-6613126 None:intergenic 25.0%
! AAAGGGAACATATATAAACA+AGG + chr3_2:6613108-6613127 None:intergenic 25.0%
!! TGTTTATATATGTTCCCTTT+TGG - chr3_2:6613108-6613127 Msa0392930:intron 25.0%
!! TGTTTATATATGTTCCCTTT+TGG - chr3_2:6613108-6613127 Msa0392930:intron 25.0%
! CAAAATGTCAATCAACTTTA+TGG + chr3_2:6613316-6613335 None:intergenic 25.0%
!!! CATAAAGTTGATTGACATTT+TGG - chr3_2:6613314-6613333 Msa0392930:intron 25.0%
! GAGTAAAAGATTATGCATAT+AGG + chr3_2:6613415-6613434 None:intergenic 25.0%
!!! AGTATTTCTATTTTCTACTG+TGG - chr3_2:6613562-6613581 Msa0392930:intron 25.0%
!!! TCAATATGTTAGATAATGGA+TGG + chr3_2:6613628-6613647 None:intergenic 25.0%
! CAACTCAATATGTTAGATAA+TGG + chr3_2:6613632-6613651 None:intergenic 25.0%
! TTAAACTAATTTCCTAATCG+TGG - chr3_2:6613686-6613705 Msa0392930:intron 25.0%
! CTGTAATCTAGTTGTAATAA+TGG - chr3_2:6613852-6613871 Msa0392930:CDS 25.0%
! GTAATCTAGTTGTAATAATG+GGG - chr3_2:6613854-6613873 Msa0392930:CDS 25.0%
! TAATCTAGTTGTAATAATGG+GGG - chr3_2:6613855-6613874 Msa0392930:CDS 25.0%
! TTCTAATGTTACAACATCTA+TGG + chr3_2:6613902-6613921 None:intergenic 25.0%
! CTATGGTTAAGAAATTATGT+TGG - chr3_2:6614140-6614159 Msa0392930:five_prime_UTR 25.0%
! ATGAAGAAATGAAATGGGTT+TGG + chr3_2:6606371-6606390 None:intergenic 30.0%
! GTGCAAGAAATTTTAGATTG+CGG - chr3_2:6606969-6606988 Msa0392930:intron 30.0%
AGCCATTGTTTATAGTCATA+AGG - chr3_2:6607155-6607174 Msa0392930:intron 30.0%
TCAAATAAGTCAATCCAAAC+AGG + chr3_2:6607181-6607200 None:intergenic 30.0%
TCTGGAGAATTTATGAGATT+AGG + chr3_2:6607278-6607297 None:intergenic 30.0%
!! GTTGTTTTCATATGCTATCT+TGG + chr3_2:6607405-6607424 None:intergenic 30.0%
TATGCATAAGCCATTTCTAT+TGG + chr3_2:6607470-6607489 None:intergenic 30.0%
GATAAGTTGTTTATCCAAAC+AGG - chr3_2:6607512-6607531 Msa0392930:CDS 30.0%
TAAGTTGTTTATCCAAACAG+GGG - chr3_2:6607514-6607533 Msa0392930:CDS 30.0%
TAAATGAAATTGTGTGCCTA+TGG - chr3_2:6607559-6607578 Msa0392930:CDS 30.0%
!! TTTTCATGGGATTTGTTTGA+AGG - chr3_2:6607681-6607700 Msa0392930:intron 30.0%
! TCATGTATTTGATTGGTTGT+TGG - chr3_2:6607843-6607862 Msa0392930:CDS 30.0%
AACATAGTTTCTGATGCATA+GGG + chr3_2:6607975-6607994 None:intergenic 30.0%
TAACATAGTTTCTGATGCAT+AGG + chr3_2:6607976-6607995 None:intergenic 30.0%
CTTACTGGTGATTCTTAAAA+TGG - chr3_2:6608370-6608389 Msa0392930:CDS 30.0%
GAAATTGTACAGAAAATGTC+TGG - chr3_2:6608457-6608476 Msa0392930:intron 30.0%
!! TAGTCTATTCAGTGTTTTTG+GGG - chr3_2:6608763-6608782 Msa0392930:CDS 30.0%
GAAAGAACTAAAAATGACAC+CGG + chr3_2:6608830-6608849 None:intergenic 30.0%
TAAAAGGTTACTTCTTCAGA+CGG - chr3_2:6608881-6608900 Msa0392930:CDS 30.0%
! GAAATAATTTGACTTCCATC+AGG + chr3_2:6609012-6609031 None:intergenic 30.0%
!!! TCAGTTTTGAATGACAAGAA+TGG + chr3_2:6609034-6609053 None:intergenic 30.0%
CTTGATCAATTAATTGGGAA+AGG - chr3_2:6609441-6609460 Msa0392930:CDS 30.0%
ATAATTTACGTCACCCTAAA+AGG + chr3_2:6609516-6609535 None:intergenic 30.0%
ACAACTAATCTCTTCAATGA+AGG - chr3_2:6609713-6609732 Msa0392930:intron 30.0%
GGTTATTGACAAACGAAATA+TGG - chr3_2:6609734-6609753 Msa0392930:intron 30.0%
ATCTTGCACTCTTAGTATAT+TGG + chr3_2:6609768-6609787 None:intergenic 30.0%
TTTATCACCATAGGAGAATT+GGG + chr3_2:6610021-6610040 None:intergenic 30.0%
ATTTATCACCATAGGAGAAT+TGG + chr3_2:6610022-6610041 None:intergenic 30.0%
ATTCTCCTATGGTGATAAAT+AGG - chr3_2:6610022-6610041 Msa0392930:CDS 30.0%
ATATGCCTATTTATCACCAT+AGG + chr3_2:6610030-6610049 None:intergenic 30.0%
TATGGTGATAAATAGGCATA+TGG - chr3_2:6610029-6610048 Msa0392930:CDS 30.0%
AAGTGGCAAATTGACATAAT+GGG + chr3_2:6610175-6610194 None:intergenic 30.0%
CACATTATCTGTTTACTTTG+AGG - chr3_2:6610248-6610267 Msa0392930:intron 30.0%
!! CTTTTGACTATCATTCATCT+AGG + chr3_2:6610358-6610377 None:intergenic 30.0%
CTAGATGAATGATAGTCAAA+AGG - chr3_2:6610356-6610375 Msa0392930:intron 30.0%
! CTTAGCAATGTGATATTTTG+GGG - chr3_2:6610450-6610469 Msa0392930:intron 30.0%
CTTGTGAATTATTTCAGAGA+GGG - chr3_2:6610494-6610513 Msa0392930:intron 30.0%
TTGTGAATTATTTCAGAGAG+GGG - chr3_2:6610495-6610514 Msa0392930:intron 30.0%
GAGCTAAGAAAAAACGTAAA+AGG + chr3_2:6610610-6610629 None:intergenic 30.0%
ATTGCAACATCATTCATCAA+TGG + chr3_2:6610658-6610677 None:intergenic 30.0%
TCAATTGAAATTTCAGCAGT+GGG + chr3_2:6610782-6610801 None:intergenic 30.0%
TAAAAGATTATGTGCCAGAT+AGG + chr3_2:6611085-6611104 None:intergenic 30.0%
! TATCTGGCACATAATCTTTT+AGG - chr3_2:6611084-6611103 Msa0392930:intron 30.0%
!!! TTTTTGCTTGATTTGCAAAG+TGG - chr3_2:6611140-6611159 Msa0392930:intron 30.0%
ATATCTTCTTGTATCCTTCT+AGG + chr3_2:6611449-6611468 None:intergenic 30.0%
GATACAAGAAGATATTCATC+AGG - chr3_2:6611454-6611473 Msa0392930:intron 30.0%
CACTTATAACATATCTTTGG+CGG - chr3_2:6611651-6611670 Msa0392930:intron 30.0%
GGAATTAACATCAAAATTGC+GGG - chr3_2:6612030-6612049 Msa0392930:intron 30.0%
! GTTTTCAAAACATGTGATCA+CGG + chr3_2:6612309-6612328 None:intergenic 30.0%
TCTCTTGTCTACCTTAATAT+AGG - chr3_2:6612336-6612355 Msa0392930:intron 30.0%
AAATATATGCTGCTGTCTAT+GGG - chr3_2:6612434-6612453 Msa0392930:CDS 30.0%
GACTTTGTGCAGAAATATAT+TGG + chr3_2:6612504-6612523 None:intergenic 30.0%
ATTTCTGCACAAAGTCATTA+TGG - chr3_2:6612508-6612527 Msa0392930:CDS 30.0%
GAAGAAAGAAAATGGAGAAT+GGG + chr3_2:6612549-6612568 None:intergenic 30.0%
!! TTGATTTGGAGATACCAAAA+GGG + chr3_2:6613125-6613144 None:intergenic 30.0%
!! TTTGATTTGGAGATACCAAA+AGG + chr3_2:6613126-6613145 None:intergenic 30.0%
! ATGATTTGGAGATACCAAAA+GGG + chr3_2:6613169-6613188 None:intergenic 30.0%
! TATGATTTGGAGATACCAAA+AGG + chr3_2:6613170-6613189 None:intergenic 30.0%
AAAACCAAAACCAATTCTAC+TGG + chr3_2:6613347-6613366 None:intergenic 30.0%
!!! AGTAGAATTGGTTTTGGTTT+TGG - chr3_2:6613346-6613365 Msa0392930:intron 30.0%
!!! ATTGGTTTTGGTTTTGGTTT+TGG - chr3_2:6613352-6613371 Msa0392930:intron 30.0%
!!! TTTTGGAACTGTTCTAACTT+GGG - chr3_2:6613369-6613388 Msa0392930:intron 30.0%
AAGATTATGCATATAGGCAA+AGG + chr3_2:6613409-6613428 None:intergenic 30.0%
AAGTTACTGTCATAGACTAT+CGG - chr3_2:6613743-6613762 Msa0392930:intron 30.0%
AAAAATAAGATATAGCAGCC+AGG + chr3_2:6613948-6613967 None:intergenic 30.0%
TGTTGTGGATAATCAAACTA+TGG - chr3_2:6614123-6614142 Msa0392930:exon 30.0%
TTCTCTTCTCTCCATTTCTA+GGG - chr3_2:6606395-6606414 Msa0392930:three_prime_UTR 35.0%
ATGAATGGAAACCCTAGAAA+TGG + chr3_2:6606409-6606428 None:intergenic 35.0%
GTTTCCATTCATCTCTTCAA+TGG - chr3_2:6606417-6606436 Msa0392930:three_prime_UTR 35.0%
TTATGCAATTACCTGTCGTT+AGG + chr3_2:6606778-6606797 None:intergenic 35.0%
GTGCAAGAACATTTAGATTG+CGG - chr3_2:6606915-6606934 Msa0392930:intron 35.0%
! GGCCTTATGACTATAAACAA+TGG + chr3_2:6607160-6607179 None:intergenic 35.0%
TTATAGTCATAAGGCCTGTT+TGG - chr3_2:6607164-6607183 Msa0392930:intron 35.0%
CAGAAACCATAAAAGTCCAT+AGG + chr3_2:6607578-6607597 None:intergenic 35.0%
CACTGTTACTCAATCTTATC+TGG - chr3_2:6607775-6607794 Msa0392930:CDS 35.0%
TGTTACTCAATCTTATCTGG+CGG - chr3_2:6607778-6607797 Msa0392930:CDS 35.0%
! TGGCGGATCATTAAAAACAT+TGG - chr3_2:6607795-6607814 Msa0392930:CDS 35.0%
TTTCTGATGCATAGGGTAAA+TGG + chr3_2:6607968-6607987 None:intergenic 35.0%
ATAACAAAGCAATTGGAGGA+GGG + chr3_2:6608006-6608025 None:intergenic 35.0%
TACGCACATAACAAAGCAAT+TGG + chr3_2:6608013-6608032 None:intergenic 35.0%
! CTTTGTTATGTGCGTAAAAC+AGG - chr3_2:6608017-6608036 Msa0392930:intron 35.0%
TTATGTGCGTAAAACAGGTT+TGG - chr3_2:6608022-6608041 Msa0392930:intron 35.0%
GGATATCAAAACGGAATTTC+TGG - chr3_2:6608139-6608158 Msa0392930:intron 35.0%
! GTGTTGCATTTGTTACTTAC+TGG - chr3_2:6608355-6608374 Msa0392930:CDS 35.0%
GAGCAAATCTTGCTTGTAAA+TGG + chr3_2:6608491-6608510 None:intergenic 35.0%
CACTAACTAACACTTGCTTA+GGG + chr3_2:6608519-6608538 None:intergenic 35.0%
CTAAGCAAGTGTTAGTTAGT+GGG - chr3_2:6608518-6608537 Msa0392930:CDS 35.0%
! AAGTGTTAGTTAGTGGGTAT+AGG - chr3_2:6608524-6608543 Msa0392930:CDS 35.0%
TAAATACCAAACAACAGCCA+GGG + chr3_2:6609389-6609408 None:intergenic 35.0%
ATAAATACCAAACAACAGCC+AGG + chr3_2:6609390-6609409 None:intergenic 35.0%
!!! TGGGTTTTATTTTGCAGATC+TGG - chr3_2:6609567-6609586 Msa0392930:intron 35.0%
AAGAAATACATGATACAGGC+AGG + chr3_2:6609684-6609703 None:intergenic 35.0%
TCCATAATCTCATCTCAAAG+CGG + chr3_2:6609955-6609974 None:intergenic 35.0%
GATGAGATTATGGATGTTCT+TGG - chr3_2:6609961-6609980 Msa0392930:intron 35.0%
TTATCACCATAGGAGAATTG+GGG + chr3_2:6610020-6610039 None:intergenic 35.0%
! AGTTGTTGTTAAGAAGACTG+AGG - chr3_2:6610110-6610129 Msa0392930:intron 35.0%
! GTTGTTGTTAAGAAGACTGA+GGG - chr3_2:6610111-6610130 Msa0392930:intron 35.0%
! TTGTTGTTAAGAAGACTGAG+GGG - chr3_2:6610112-6610131 Msa0392930:intron 35.0%
AGTGGCAAATTGACATAATG+GGG + chr3_2:6610174-6610193 None:intergenic 35.0%
GAAGTGGCAAATTGACATAA+TGG + chr3_2:6610176-6610195 None:intergenic 35.0%
TTGGGATTGTTTGAAAGAAG+TGG + chr3_2:6610192-6610211 None:intergenic 35.0%
AACAATCCCAAAGTCTTCTT+TGG - chr3_2:6610201-6610220 Msa0392930:intron 35.0%
! CTGTTTACTTTGAGGAAGAT+TGG - chr3_2:6610256-6610275 Msa0392930:intron 35.0%
AGTCAAAAGGTTAGAGATAG+AGG - chr3_2:6610369-6610388 Msa0392930:intron 35.0%
GTCAAAAGGTTAGAGATAGA+GGG - chr3_2:6610370-6610389 Msa0392930:intron 35.0%
GCTTGTGAATTATTTCAGAG+AGG - chr3_2:6610493-6610512 Msa0392930:intron 35.0%
! TATACTCTGACTTGTACTCT+TGG + chr3_2:6610696-6610715 None:intergenic 35.0%
AGCTTATTTCAATACCCACA+AGG - chr3_2:6610732-6610751 Msa0392930:intron 35.0%
GTCAATTGAAATTTCAGCAG+TGG + chr3_2:6610783-6610802 None:intergenic 35.0%
ACCATTCATCAACGTAAAGA+GGG + chr3_2:6611006-6611025 None:intergenic 35.0%
TACCATTCATCAACGTAAAG+AGG + chr3_2:6611007-6611026 None:intergenic 35.0%
TGAATGGTAGAGAAATAGTC+AGG - chr3_2:6611018-6611037 Msa0392930:intron 35.0%
AAACACACATAAAGTGAGAG+AGG + chr3_2:6611190-6611209 None:intergenic 35.0%
! TATGATTTGTGCAGAAATCC+AGG - chr3_2:6611269-6611288 Msa0392930:intron 35.0%
TAAAAGAAGAAGACATGGCA+GGG - chr3_2:6611364-6611383 Msa0392930:intron 35.0%
AGAAGATATTCATCAGGTTC+AGG - chr3_2:6611460-6611479 Msa0392930:intron 35.0%
GTAAGCTTGACAAGGAAAAA+GGG - chr3_2:6611492-6611511 Msa0392930:intron 35.0%
CCTTAATAGATGTTAAGCCA+CGG + chr3_2:6611604-6611623 None:intergenic 35.0%
CGTGGCTTAACATCTATTAA+GGG - chr3_2:6611602-6611621 Msa0392930:intron 35.0%
AACATCTATTAAGGGCTTAG+AGG - chr3_2:6611610-6611629 Msa0392930:intron 35.0%
ACATCTATTAAGGGCTTAGA+GGG - chr3_2:6611611-6611630 Msa0392930:intron 35.0%
!! TTGATTCATTTTGGCAGAGA+AGG - chr3_2:6611798-6611817 Msa0392930:intron 35.0%
! TTAGGGATGAAAAGTATGGT+TGG - chr3_2:6611912-6611931 Msa0392930:intron 35.0%
! GAAAAGTATGGTTGGAAGTA+TGG - chr3_2:6611920-6611939 Msa0392930:intron 35.0%
! AAAAAGCTTTGTGCAACTCT+TGG + chr3_2:6611954-6611973 None:intergenic 35.0%
TTAATTCCAACACAAGCTCT+GGG + chr3_2:6612018-6612037 None:intergenic 35.0%
TTAGTGGTTAATCTTGCAAG+TGG - chr3_2:6612115-6612134 Msa0392930:intron 35.0%
AGACAGCAGCATATATTTCA+AGG + chr3_2:6612432-6612451 None:intergenic 35.0%
GAAATATATGCTGCTGTCTA+TGG - chr3_2:6612433-6612452 Msa0392930:CDS 35.0%
AATATATGCTGCTGTCTATG+GGG - chr3_2:6612435-6612454 Msa0392930:CDS 35.0%
GAGCATGATGTTTCACAATT+GGG - chr3_2:6612462-6612481 Msa0392930:CDS 35.0%
GGAAGAAAGAAAATGGAGAA+TGG + chr3_2:6612550-6612569 None:intergenic 35.0%
TAGAGAGGGAAGAAAGAAAA+TGG + chr3_2:6612557-6612576 None:intergenic 35.0%
CTTTCTTCCCTCTCTATTTA+AGG - chr3_2:6612561-6612580 Msa0392930:intron 35.0%
CATCGAACATTGTTTCATCA+CGG + chr3_2:6612723-6612742 None:intergenic 35.0%
GAAACAATGTTCGATGCATA+TGG - chr3_2:6612727-6612746 Msa0392930:intron 35.0%
AAGTAAAAGAGAAACCAACC+CGG + chr3_2:6612818-6612837 None:intergenic 35.0%
!! AAAGCTTTATTGAGGTTTGC+TGG - chr3_2:6612858-6612877 Msa0392930:intron 35.0%
GTCAATCAACTTTATGGAAC+TGG + chr3_2:6613310-6613329 None:intergenic 35.0%
!!! GTTTTGGAACTGTTCTAACT+TGG - chr3_2:6613368-6613387 Msa0392930:intron 35.0%
TGACAGTAACTTCTTCTTCT+GGG + chr3_2:6613735-6613754 None:intergenic 35.0%
ATGACAGTAACTTCTTCTTC+TGG + chr3_2:6613736-6613755 None:intergenic 35.0%
! ACCAAAACCTTTTTCTGTTC+CGG + chr3_2:6614034-6614053 None:intergenic 35.0%
! TGTTGTTGTTGTTGTTGTTG+TGG - chr3_2:6614099-6614118 Msa0392930:CDS 35.0%
!! AATTATGTTGGCCTTGTATC+AGG - chr3_2:6614152-6614171 Msa0392930:five_prime_UTR 35.0%
ATAGGAAAAGACCTGATACA+AGG + chr3_2:6614166-6614185 None:intergenic 35.0%
! AGGTCTTTTCCTATTGTTTG+TGG - chr3_2:6614172-6614191 Msa0392930:five_prime_UTR 35.0%
TTTGACCTAGATTAAAACCC+AGG + chr3_2:6614208-6614227 None:intergenic 35.0%
!!! TGGTTTTGATTCGAGGGTTT+GGG + chr3_2:6606351-6606370 None:intergenic 40.0%
!!! TTGGTTTTGATTCGAGGGTT+TGG + chr3_2:6606352-6606371 None:intergenic 40.0%
!!! TGGGTTTGGTTTTGATTCGA+GGG + chr3_2:6606357-6606376 None:intergenic 40.0%
!!! ATGGGTTTGGTTTTGATTCG+AGG + chr3_2:6606358-6606377 None:intergenic 40.0%
CTTCTCTTCTCTCCATTTCT+AGG - chr3_2:6606394-6606413 Msa0392930:three_prime_UTR 40.0%
CTTCTAGATCTCTTATACGG+CGG + chr3_2:6606739-6606758 None:intergenic 40.0%
GCCGTATAAGAGATCTAGAA+GGG - chr3_2:6606738-6606757 Msa0392930:three_prime_UTR 40.0%
CCCCTTCTAGATCTCTTATA+CGG + chr3_2:6606742-6606761 None:intergenic 40.0%
CCGTATAAGAGATCTAGAAG+GGG - chr3_2:6606739-6606758 Msa0392930:three_prime_UTR 40.0%
ATATAACTTCTGCCCCTGTT+TGG + chr3_2:6607529-6607548 None:intergenic 40.0%
! TGTGTGCCTATGGACTTTTA+TGG - chr3_2:6607569-6607588 Msa0392930:CDS 40.0%
CATAACAAAGCAATTGGAGG+AGG + chr3_2:6608007-6608026 None:intergenic 40.0%
GCACATAACAAAGCAATTGG+AGG + chr3_2:6608010-6608029 None:intergenic 40.0%
CCACTAACTAACACTTGCTT+AGG + chr3_2:6608520-6608539 None:intergenic 40.0%
CCTAAGCAAGTGTTAGTTAG+TGG - chr3_2:6608517-6608536 Msa0392930:CDS 40.0%
GACAGTATGTTTCACACATC+TGG + chr3_2:6608669-6608688 None:intergenic 40.0%
!!! CTATTCAGTGTTTTTGGGGT+TGG - chr3_2:6608767-6608786 Msa0392930:CDS 40.0%
! TTGAGGTAGCGATTTGAGAT+TGG - chr3_2:6608794-6608813 Msa0392930:CDS 40.0%
AAACCACTGAACAGCAAACA+AGG + chr3_2:6609163-6609182 None:intergenic 40.0%
! TTGCTGTTCAGTGGTTTAAG+TGG - chr3_2:6609166-6609185 Msa0392930:CDS 40.0%
TGCTGTTCAGTGGTTTAAGT+GGG - chr3_2:6609167-6609186 Msa0392930:CDS 40.0%
TTCAGTGGTTTAAGTGGGTA+TGG - chr3_2:6609172-6609191 Msa0392930:CDS 40.0%
TGGTTTAAGAATGCCATGCA+GGG + chr3_2:6609211-6609230 None:intergenic 40.0%
TTGGTTTAAGAATGCCATGC+AGG + chr3_2:6609212-6609231 None:intergenic 40.0%
AAATACCAAACAACAGCCAG+GGG + chr3_2:6609388-6609407 None:intergenic 40.0%
GTTATGCAGATTTGCCAAGT+GGG - chr3_2:6609602-6609621 Msa0392930:intron 40.0%
TTATGCAGATTTGCCAAGTG+GGG - chr3_2:6609603-6609622 Msa0392930:intron 40.0%
GTTCCAATATCTTGAATGGG+TGG - chr3_2:6609849-6609868 Msa0392930:CDS 40.0%
AAGCCACCCATTCAAGATAT+TGG + chr3_2:6609855-6609874 None:intergenic 40.0%
!! ACCGCTTTGAGATGAGATTA+TGG - chr3_2:6609951-6609970 Msa0392930:intron 40.0%
GAGATTATGGATGTTCTTGG+AGG - chr3_2:6609964-6609983 Msa0392930:intron 40.0%
AGATAATGTGATAAAGCCCC+AGG + chr3_2:6610238-6610257 None:intergenic 40.0%
!! CTTTGAGGAAGATTGGTTTC+AGG - chr3_2:6610263-6610282 Msa0392930:intron 40.0%
!! AAGATTGGTTTCAGGCTCTA+TGG - chr3_2:6610271-6610290 Msa0392930:intron 40.0%
AAAAGGTTAGAGATAGAGGG+AGG - chr3_2:6610373-6610392 Msa0392930:intron 40.0%
! CCACAGAAATCCTGATTTGT+GGG - chr3_2:6610396-6610415 Msa0392930:intron 40.0%
! AATCCTGATTTGTGGGATGA+TGG - chr3_2:6610403-6610422 Msa0392930:intron 40.0%
GTCCTATAAGCAATTCATCC+AGG - chr3_2:6610523-6610542 Msa0392930:intron 40.0%
CTCCTGGATGAATTGCTTAT+AGG + chr3_2:6610528-6610547 None:intergenic 40.0%
GTATATCATCTTCAAGCTCC+TGG + chr3_2:6610544-6610563 None:intergenic 40.0%
TTTCAATACCCACAAGGATG+CGG - chr3_2:6610738-6610757 Msa0392930:intron 40.0%
! TCCCTCTTTACGTTGATGAA+TGG - chr3_2:6611002-6611021 Msa0392930:intron 40.0%
! CTGGCACATAATCTTTTAGG+AGG - chr3_2:6611087-6611106 Msa0392930:intron 40.0%
GAATGAAAATGCTCGACGTT+TGG - chr3_2:6611109-6611128 Msa0392930:intron 40.0%
AATGAATTTAGGCAAGCGTG+AGG + chr3_2:6611228-6611247 None:intergenic 40.0%
TCTGTTTCCTCCTCTGAATT+GGG + chr3_2:6611335-6611354 None:intergenic 40.0%
ATCTGTTTCCTCCTCTGAAT+TGG + chr3_2:6611336-6611355 None:intergenic 40.0%
GGTGGTAAAAGAAGAAGACA+TGG - chr3_2:6611359-6611378 Msa0392930:intron 40.0%
GTAAAAGAAGAAGACATGGC+AGG - chr3_2:6611363-6611382 Msa0392930:intron 40.0%
AAAAGAAGAAGACATGGCAG+GGG - chr3_2:6611365-6611384 Msa0392930:intron 40.0%
TTCTAGGTTCAGAACTGACA+GGG + chr3_2:6611433-6611452 None:intergenic 40.0%
TGTTGTTCGTAAGCTTGACA+AGG - chr3_2:6611484-6611503 Msa0392930:intron 40.0%
CGTAAGCTTGACAAGGAAAA+AGG - chr3_2:6611491-6611510 Msa0392930:intron 40.0%
AGCCACGGATAATTACTACA+GGG + chr3_2:6611589-6611608 None:intergenic 40.0%
AAGCCACGGATAATTACTAC+AGG + chr3_2:6611590-6611609 None:intergenic 40.0%
CCGTGGCTTAACATCTATTA+AGG - chr3_2:6611601-6611620 Msa0392930:intron 40.0%
!! ACATATCTTTGGCGGATTCA+TGG - chr3_2:6611659-6611678 Msa0392930:intron 40.0%
! CTAGTGATGCCAAAGGTTTT+AGG - chr3_2:6611708-6611727 Msa0392930:intron 40.0%
TCTCACATGCCTAAAACCTT+TGG + chr3_2:6611720-6611739 None:intergenic 40.0%
GCATGAAGAAACAGCTAAGT+CGG - chr3_2:6611754-6611773 Msa0392930:intron 40.0%
CATGAAGAAACAGCTAAGTC+GGG - chr3_2:6611755-6611774 Msa0392930:intron 40.0%
ATGAAGAAACAGCTAAGTCG+GGG - chr3_2:6611756-6611775 Msa0392930:intron 40.0%
!! TTCATTTTGGCAGAGAAGGT+TGG - chr3_2:6611802-6611821 Msa0392930:intron 40.0%
TTTGCAGTCCTTACTTCCAA+GGG + chr3_2:6611839-6611858 None:intergenic 40.0%
GTTAATTCCAACACAAGCTC+TGG + chr3_2:6612019-6612038 None:intergenic 40.0%
CATCAGGATCACTACAATGA+AGG + chr3_2:6612170-6612189 None:intergenic 40.0%
TACAAGCAACTTTGCAGATG+TGG - chr3_2:6612363-6612382 Msa0392930:intron 40.0%
GGAGCATGATGTTTCACAAT+TGG - chr3_2:6612461-6612480 Msa0392930:CDS 40.0%
GGCTTGTCCTTAAATAGAGA+GGG + chr3_2:6612571-6612590 None:intergenic 40.0%
AGGCTTGTCCTTAAATAGAG+AGG + chr3_2:6612572-6612591 None:intergenic 40.0%
TCCAGTAACCTTCGCTTTAA+AGG + chr3_2:6612592-6612611 None:intergenic 40.0%
TTAAAGCGAAGGTTACTGGA+AGG - chr3_2:6612592-6612611 Msa0392930:intron 40.0%
TCCCACGATCATCTTTCAAT+CGG + chr3_2:6612618-6612637 None:intergenic 40.0%
TGAAAGATGATCGTGGGAAT+CGG - chr3_2:6612620-6612639 Msa0392930:intron 40.0%
GATAGGAGTGACAGAACAAA+TGG - chr3_2:6612652-6612671 Msa0392930:intron 40.0%
ACAATGTTCGATGCATATGG+TGG - chr3_2:6612730-6612749 Msa0392930:intron 40.0%
! TCTGAGTTGAATGATACAGC+AGG + chr3_2:6612757-6612776 None:intergenic 40.0%
TTTATACCTATTCAGGCCTC+TGG - chr3_2:6612892-6612911 Msa0392930:intron 40.0%
TTATACCTATTCAGGCCTCT+GGG - chr3_2:6612893-6612912 Msa0392930:intron 40.0%
AAGTTGCGATGCAGATGTTT+AGG - chr3_2:6612939-6612958 Msa0392930:intron 40.0%
AGTTGCGATGCAGATGTTTA+GGG - chr3_2:6612940-6612959 Msa0392930:intron 40.0%
ATGCAGATGTTTAGGGATCA+AGG - chr3_2:6612947-6612966 Msa0392930:intron 40.0%
!! CTCTCCAGTAGAATTGGTTT+TGG - chr3_2:6613340-6613359 Msa0392930:intron 40.0%
GTATGTGATCGACTGTTTAG+TGG - chr3_2:6613658-6613677 Msa0392930:intron 40.0%
! TTGATAACTGCACCACGATT+AGG + chr3_2:6613701-6613720 None:intergenic 40.0%
GACAGTAACTTCTTCTTCTG+GGG + chr3_2:6613734-6613753 None:intergenic 40.0%
TTGGCTCATTGAGATTGGAT+TGG - chr3_2:6613786-6613805 Msa0392930:CDS 40.0%
TCAATCAAAAACTACCTCCC+CGG - chr3_2:6614012-6614031 Msa0392930:CDS 40.0%
! CAAAACCTTTTTCTGTTCCG+GGG + chr3_2:6614032-6614051 None:intergenic 40.0%
! CCAAAACCTTTTTCTGTTCC+GGG + chr3_2:6614033-6614052 None:intergenic 40.0%
!! GGAACAGAAAAAGGTTTTGG+TGG - chr3_2:6614033-6614052 Msa0392930:CDS 40.0%
TATATTCCGATCCCACTTAG+TGG - chr3_2:6614066-6614085 Msa0392930:CDS 40.0%
ATATTCCGATCCCACTTAGT+GGG - chr3_2:6614067-6614086 Msa0392930:CDS 40.0%
! AAAGCCTTATCCCACTAAGT+GGG + chr3_2:6614080-6614099 None:intergenic 40.0%
CACTGACATCCACAAACAAT+AGG + chr3_2:6614184-6614203 None:intergenic 40.0%
!! AGTGACCTGGGTTTTAATCT+AGG - chr3_2:6614200-6614219 Msa0392930:five_prime_UTR 40.0%
TCGGCCATTGAAGAGATGAA+TGG + chr3_2:6606424-6606443 None:intergenic 45.0%
GGCGTTTGATGTCTCTATCA+CGG + chr3_2:6606645-6606664 None:intergenic 45.0%
CGCCGTATAAGAGATCTAGA+AGG - chr3_2:6606737-6606756 Msa0392930:three_prime_UTR 45.0%
TACCTGTCGTTAGGTCTATG+AGG + chr3_2:6606769-6606788 None:intergenic 45.0%
AGGTTTGGCCATGATCACTT+CGG - chr3_2:6608037-6608056 Msa0392930:intron 45.0%
TATGCAGATGATAGACCTGG+TGG - chr3_2:6608091-6608110 Msa0392930:intron 45.0%
AGATTTCCACATCGATCTGG+AGG - chr3_2:6608115-6608134 Msa0392930:intron 45.0%
GATTTCCACATCGATCTGGA+GGG - chr3_2:6608116-6608135 Msa0392930:intron 45.0%
ATTTCCACATCGATCTGGAG+GGG - chr3_2:6608117-6608136 Msa0392930:intron 45.0%
TCTGGAGGGGGATATCAAAA+CGG - chr3_2:6608130-6608149 Msa0392930:intron 45.0%
GTGTGCAGCAACTCAGATTA+GGG + chr3_2:6608565-6608584 None:intergenic 45.0%
AGTGTGCAGCAACTCAGATT+AGG + chr3_2:6608566-6608585 None:intergenic 45.0%
TCTCAAATCGCTACCTCAAG+TGG + chr3_2:6608793-6608812 None:intergenic 45.0%
! TGAGATTGGTCACTATGCTC+CGG - chr3_2:6608808-6608827 Msa0392930:CDS 45.0%
!! TGTCCTTGTTTGCTGTTCAG+TGG - chr3_2:6609157-6609176 Msa0392930:CDS 45.0%
GGTTTAAGAATGCCATGCAG+GGG + chr3_2:6609210-6609229 None:intergenic 45.0%
ATTCTCTCCCCACCTCTTAA+TGG - chr3_2:6609345-6609364 Msa0392930:intron 45.0%
AAACACACCCCTCCATTAAG+AGG + chr3_2:6609360-6609379 None:intergenic 45.0%
AATACCAAACAACAGCCAGG+GGG + chr3_2:6609387-6609406 None:intergenic 45.0%
CAAATCTGCATAACCGCGAT+TGG + chr3_2:6609596-6609615 None:intergenic 45.0%
GGTTATGCAGATTTGCCAAG+TGG - chr3_2:6609601-6609620 Msa0392930:intron 45.0%
TATGCAGATTTGCCAAGTGG+GGG - chr3_2:6609604-6609623 Msa0392930:intron 45.0%
AGTAGCACTCAACAGAGATC+TGG + chr3_2:6609922-6609941 None:intergenic 45.0%
TCTTGGAGGAATTTGACGTG+CGG - chr3_2:6609978-6609997 Msa0392930:intron 45.0%
TGAACACCCCAATTCTCCTA+TGG - chr3_2:6610011-6610030 Msa0392930:CDS 45.0%
TCCAAACAAATGCTCTCTGC+AGG - chr3_2:6610060-6610079 Msa0392930:intron 45.0%
CCAAACAAATGCTCTCTGCA+GGG - chr3_2:6610061-6610080 Msa0392930:intron 45.0%
CAGCTGCCAAAGAAGACTTT+GGG + chr3_2:6610210-6610229 None:intergenic 45.0%
CAAAGTCTTCTTTGGCAGCT+GGG - chr3_2:6610209-6610228 Msa0392930:intron 45.0%
AAAGTCTTCTTTGGCAGCTG+GGG - chr3_2:6610210-6610229 Msa0392930:intron 45.0%
! ATTGGTTTCAGGCTCTATGG+AGG - chr3_2:6610274-6610293 Msa0392930:intron 45.0%
! GCCACAGAAATCCTGATTTG+TGG - chr3_2:6610395-6610414 Msa0392930:intron 45.0%
CCCACAAATCAGGATTTCTG+TGG + chr3_2:6610399-6610418 None:intergenic 45.0%
CAACCATCATCCCACAAATC+AGG + chr3_2:6610409-6610428 None:intergenic 45.0%
AAATGCTCGACGTTTGGCAA+AGG - chr3_2:6611115-6611134 Msa0392930:intron 45.0%
!! ACTGGCTTGCTCTGATTTAG+TGG + chr3_2:6611309-6611328 None:intergenic 45.0%
ACATGGCAGGGGATCTAATA+AGG - chr3_2:6611376-6611395 Msa0392930:intron 45.0%
CTTCTAGGTTCAGAACTGAC+AGG + chr3_2:6611434-6611453 None:intergenic 45.0%
!! CTGTCAGTTCTGAACCTAGA+AGG - chr3_2:6611432-6611451 Msa0392930:intron 45.0%
AATAGTGATAAGGCTCGCAG+TGG - chr3_2:6611554-6611573 Msa0392930:intron 45.0%
CTTGAGACTAGTGATGCCAA+AGG - chr3_2:6611701-6611720 Msa0392930:intron 45.0%
TTTAGGCATGTGAGACCAGA+AGG - chr3_2:6611725-6611744 Msa0392930:intron 45.0%
CTTTGCAGTCCTTACTTCCA+AGG + chr3_2:6611840-6611859 None:intergenic 45.0%
CTTGGAAGTAAGGACTGCAA+AGG - chr3_2:6611838-6611857 Msa0392930:intron 45.0%
! TATGGTTGGAAGTATGGCTG+TGG - chr3_2:6611926-6611945 Msa0392930:intron 45.0%
AAAACACCCAGAGCTTGTGT+TGG - chr3_2:6612009-6612028 Msa0392930:intron 45.0%
GTGGTTAATCTTGCAAGTGG+TGG - chr3_2:6612118-6612137 Msa0392930:intron 45.0%
GTTAATCTTGCAAGTGGTGG+TGG - chr3_2:6612121-6612140 Msa0392930:intron 45.0%
TGCAGCAATCTCAGGTAGAA+TGG - chr3_2:6612211-6612230 Msa0392930:intron 45.0%
!! AGGACAAGCCTTTAAAGCGA+AGG - chr3_2:6612581-6612600 Msa0392930:intron 45.0%
!! GCCTTTAAAGCGAAGGTTAC+TGG - chr3_2:6612588-6612607 Msa0392930:intron 45.0%
GCCGATTGAAAGATGATCGT+GGG - chr3_2:6612614-6612633 Msa0392930:intron 45.0%
TTGTTCTGTCACTCCTATCC+TGG + chr3_2:6612651-6612670 None:intergenic 45.0%
AACATCTGCATCGCAACTTC+TGG + chr3_2:6612938-6612957 None:intergenic 45.0%
! CCTGATGGATCATACGAAGA+TGG + chr3_2:6612974-6612993 None:intergenic 45.0%
CCATCTTCGTATGATCCATC+AGG - chr3_2:6612971-6612990 Msa0392930:intron 45.0%
TGCATGCACTAAGCATTCTG+AGG + chr3_2:6613275-6613294 None:intergenic 45.0%
GTGGTGCAGTTATCAAGACT+TGG - chr3_2:6613705-6613724 Msa0392930:intron 45.0%
CATAGACTATCGGAGCTTGT+AGG - chr3_2:6613753-6613772 Msa0392930:intron 45.0%
! GCTTGTAGGTTTCACTGGTT+TGG - chr3_2:6613767-6613786 Msa0392930:intron 45.0%
!! CTGGTTTGGCTCATTGAGAT+TGG - chr3_2:6613781-6613800 Msa0392930:intron 45.0%
! CCAGGTAGCATATTTTGCTC+GGG + chr3_2:6613930-6613949 None:intergenic 45.0%
! GCCAGGTAGCATATTTTGCT+CGG + chr3_2:6613931-6613950 None:intergenic 45.0%
! CCCGGAACAGAAAAAGGTTT+TGG - chr3_2:6614030-6614049 Msa0392930:CDS 45.0%
CTTATCCCACTAAGTGGGAT+CGG + chr3_2:6614075-6614094 None:intergenic 45.0%
! CAAAGCCTTATCCCACTAAG+TGG + chr3_2:6614081-6614100 None:intergenic 45.0%
TTTGTGGATGTCAGTGACCT+GGG - chr3_2:6614188-6614207 Msa0392930:five_prime_UTR 45.0%
!! ACAAAATATTAAAATATTAT+AGG - chr3_2:6610085-6610104 Msa0392930:intron 5.0%
TGGAGATCGGTCGTGAGATT+CGG + chr3_2:6606464-6606483 None:intergenic 50.0%
CGAAATCTCTGTCGTCTCGA+CGG + chr3_2:6606564-6606583 None:intergenic 50.0%
AGTTAGGGCTAGGACTACGA+CGG + chr3_2:6606666-6606685 None:intergenic 50.0%
CTAGATCTCTTATACGGCGG+AGG + chr3_2:6606736-6606755 None:intergenic 50.0%
GTCCTCATAGACCTAACGAC+AGG - chr3_2:6606764-6606783 Msa0392930:three_prime_UTR 50.0%
TTTGGCCATGATCACTTCGG+TGG - chr3_2:6608040-6608059 Msa0392930:intron 50.0%
CATAGCCACCGAAGTGATCA+TGG + chr3_2:6608048-6608067 None:intergenic 50.0%
CTATGAACGTGGAGGTGGAA+GGG - chr3_2:6608063-6608082 Msa0392930:intron 50.0%
TATGAACGTGGAGGTGGAAG+GGG - chr3_2:6608064-6608083 Msa0392930:intron 50.0%
GGCTATGCAGATGATAGACC+TGG - chr3_2:6608088-6608107 Msa0392930:intron 50.0%
GGCAGATTTCCACATCGATC+TGG - chr3_2:6608112-6608131 Msa0392930:intron 50.0%
TTTCCACATCGATCTGGAGG+GGG - chr3_2:6608118-6608137 Msa0392930:intron 50.0%
!!! TTTTTGGGGTTGGCCACTTG+AGG - chr3_2:6608777-6608796 Msa0392930:CDS 50.0%
TCTCCCCACCTCTTAATGGA+GGG - chr3_2:6609349-6609368 Msa0392930:intron 50.0%
ACACCCCTCCATTAAGAGGT+GGG + chr3_2:6609356-6609375 None:intergenic 50.0%
CTTGGAGGAATTTGACGTGC+GGG - chr3_2:6609979-6609998 Msa0392930:intron 50.0%
TTGGAGGAATTTGACGTGCG+GGG - chr3_2:6609980-6609999 Msa0392930:intron 50.0%
!! CCCTGCAGAGAGCATTTGTT+TGG + chr3_2:6610064-6610083 None:intergenic 50.0%
ACTGAGGGGCTGTTTGAAAG+CGG - chr3_2:6610126-6610145 Msa0392930:intron 50.0%
CCAGCTGCCAAAGAAGACTT+TGG + chr3_2:6610211-6610230 None:intergenic 50.0%
CCAAAGTCTTCTTTGGCAGC+TGG - chr3_2:6610208-6610227 Msa0392930:intron 50.0%
AAGTCTTCTTTGGCAGCTGG+GGG - chr3_2:6610211-6610230 Msa0392930:intron 50.0%
TACCTACGCTCAGCTTCAGA+TGG + chr3_2:6610569-6610588 None:intergenic 50.0%
ATACCACTCCGCATCCTTGT+GGG + chr3_2:6610749-6610768 None:intergenic 50.0%
TATACCACTCCGCATCCTTG+TGG + chr3_2:6610750-6610769 None:intergenic 50.0%
GAATTTAGGCAAGCGTGAGG+AGG + chr3_2:6611225-6611244 None:intergenic 50.0%
TCAGAGGAGGAAACAGATGC+TGG - chr3_2:6611338-6611357 Msa0392930:intron 50.0%
CGATTTCTCTGCTGCTCCAA+AGG - chr3_2:6611403-6611422 Msa0392930:intron 50.0%
GGCCCTGTAGTAATTATCCG+TGG - chr3_2:6611584-6611603 Msa0392930:intron 50.0%
!! CTTAGAGGGTGTTGAGCTAC+TGG - chr3_2:6611625-6611644 Msa0392930:intron 50.0%
ATGTGAGACCAGAAGGAGCA+AGG - chr3_2:6611732-6611751 Msa0392930:intron 50.0%
TCTTCATGCCTTGCTCCTTC+TGG + chr3_2:6611743-6611762 None:intergenic 50.0%
AGCTAAGTCGGGGTCAGAAT+GGG - chr3_2:6611766-6611785 Msa0392930:intron 50.0%
TCCTTACTTCCAAGGGATCC+AGG + chr3_2:6611832-6611851 None:intergenic 50.0%
TGTAGTGATCCTGATGCTCC+TGG - chr3_2:6612174-6612193 Msa0392930:intron 50.0%
ACCTGAGATTGCTGCATGAC+AGG + chr3_2:6612207-6612226 None:intergenic 50.0%
GGCCGATTGAAAGATGATCG+TGG - chr3_2:6612613-6612632 Msa0392930:intron 50.0%
TCATGGGATGGCGAACTATC+AGG + chr3_2:6612685-6612704 None:intergenic 50.0%
ATAGTTCGCCATCCCATGAG+AGG - chr3_2:6612686-6612705 Msa0392930:intron 50.0%
GTTTCCCAACTGCCTCTCAT+GGG + chr3_2:6612701-6612720 None:intergenic 50.0%
AGGCATCAAAACTGGAGGAG+GGG + chr3_2:6612785-6612804 None:intergenic 50.0%
CAGGCATCAAAACTGGAGGA+GGG + chr3_2:6612786-6612805 None:intergenic 50.0%
ACAGGCATCAAAACTGGAGG+AGG + chr3_2:6612787-6612806 None:intergenic 50.0%
GGTACAGGCATCAAAACTGG+AGG + chr3_2:6612790-6612809 None:intergenic 50.0%
CCAGGTACAGGCATCAAAAC+TGG + chr3_2:6612793-6612812 None:intergenic 50.0%
!! CCAGTTTTGATGCCTGTACC+TGG - chr3_2:6612790-6612809 Msa0392930:intron 50.0%
TCTGGTGGAGCAGGAACAAA+GGG + chr3_2:6612920-6612939 None:intergenic 50.0%
TTCTGGTGGAGCAGGAACAA+AGG + chr3_2:6612921-6612940 None:intergenic 50.0%
ATCTGCATCGCAACTTCTGG+TGG + chr3_2:6612935-6612954 None:intergenic 50.0%
GAACGCATCGTCATTCCTGA+TGG + chr3_2:6612989-6613008 None:intergenic 50.0%
TCAGGAATGACGATGCGTTC+TGG - chr3_2:6612989-6613008 Msa0392930:intron 50.0%
ATGCGTTCTGGTCCTCACAT+AGG - chr3_2:6613001-6613020 Msa0392930:intron 50.0%
TGCGTTCTGGTCCTCACATA+GGG - chr3_2:6613002-6613021 Msa0392930:intron 50.0%
GGGAGGAACAGCAATCATAG+AGG + chr3_2:6613035-6613054 None:intergenic 50.0%
ATAAGTACCTCCGCATCCGT+CGG + chr3_2:6613075-6613094 None:intergenic 50.0%
TGGGTGCTCTCCAGTAGAAT+TGG - chr3_2:6613334-6613353 Msa0392930:intron 50.0%
TCGGAGCTTGTAGGTTTCAC+TGG - chr3_2:6613762-6613781 Msa0392930:intron 50.0%
CCCGAGCAAAATATGCTACC+TGG - chr3_2:6613927-6613946 Msa0392930:CDS 50.0%
TACCTCCCCGGAACAGAAAA+AGG - chr3_2:6614024-6614043 Msa0392930:CDS 50.0%
! AACCTTTTTCTGTTCCGGGG+AGG + chr3_2:6614029-6614048 None:intergenic 50.0%
CGATCCCACTTAGTGGGATA+AGG - chr3_2:6614073-6614092 Msa0392930:CDS 50.0%
GTTTGTGGATGTCAGTGACC+TGG - chr3_2:6614187-6614206 Msa0392930:five_prime_UTR 50.0%
! GGGAGGGAGGTTTTCGACTT+CGG + chr3_2:6606443-6606462 None:intergenic 55.0%
ATCGGTCGTGAGATTCGGGA+GGG + chr3_2:6606459-6606478 None:intergenic 55.0%
GGAGATCGGTCGTGAGATTC+GGG + chr3_2:6606463-6606482 None:intergenic 55.0%
AAATCGCGACGACGAGGGTT+GGG + chr3_2:6606538-6606557 None:intergenic 55.0%
CGGTCACGATAGTTAGGGCT+AGG + chr3_2:6606676-6606695 None:intergenic 55.0%
AGCGGCGGTCACGATAGTTA+GGG + chr3_2:6606681-6606700 None:intergenic 55.0%
TAGCGGCGGTCACGATAGTT+AGG + chr3_2:6606682-6606701 None:intergenic 55.0%
CACTTCGGTGGCTATGAACG+TGG - chr3_2:6608052-6608071 Msa0392930:intron 55.0%
TTCGGTGGCTATGAACGTGG+AGG - chr3_2:6608055-6608074 Msa0392930:intron 55.0%
GCTATGAACGTGGAGGTGGA+AGG - chr3_2:6608062-6608081 Msa0392930:intron 55.0%
CGATGTGGAAATCTGCCACC+AGG + chr3_2:6608109-6608128 None:intergenic 55.0%
TATCCCCCTCCAGATCGATG+TGG + chr3_2:6608124-6608143 None:intergenic 55.0%
TTTCTCTCACGTCCCCTGCA+TGG - chr3_2:6609195-6609214 Msa0392930:CDS 55.0%
CTCTCCCCACCTCTTAATGG+AGG - chr3_2:6609348-6609367 Msa0392930:intron 55.0%
CTCCCCACCTCTTAATGGAG+GGG - chr3_2:6609350-6609369 Msa0392930:intron 55.0%
CACCCCTCCATTAAGAGGTG+GGG + chr3_2:6609355-6609374 None:intergenic 55.0%
CACACCCCTCCATTAAGAGG+TGG + chr3_2:6609357-6609376 None:intergenic 55.0%
GCAGATCTGGATGCCAATCG+CGG - chr3_2:6609580-6609599 Msa0392930:intron 55.0%
TGGAGGAATTTGACGTGCGG+GGG - chr3_2:6609981-6610000 Msa0392930:intron 55.0%
AGTCTTCTTTGGCAGCTGGG+GGG - chr3_2:6610212-6610231 Msa0392930:intron 55.0%
GGTTTCAGGCTCTATGGAGG+AGG - chr3_2:6610277-6610296 Msa0392930:intron 55.0%
! TGCCATCTGAAGCTGAGCGT+AGG - chr3_2:6610564-6610583 Msa0392930:intron 55.0%
ATACCCACAAGGATGCGGAG+TGG - chr3_2:6610743-6610762 Msa0392930:intron 55.0%
CAAGCGTGAGGAGGAAGAGA+AGG + chr3_2:6611216-6611235 None:intergenic 55.0%
AGCCAGTGAGCCCAATTCAG+AGG - chr3_2:6611322-6611341 Msa0392930:intron 55.0%
CTCCTCTGAATTGGGCTCAC+TGG + chr3_2:6611327-6611346 None:intergenic 55.0%
CAGTGAGCCCAATTCAGAGG+AGG - chr3_2:6611325-6611344 Msa0392930:intron 55.0%
GAGGAGGAAACAGATGCTGG+TGG - chr3_2:6611341-6611360 Msa0392930:intron 55.0%
GAACTGACAGGGTGAGCCTT+TGG + chr3_2:6611422-6611441 None:intergenic 55.0%
TAAGGCTCGCAGTGGATCTG+TGG - chr3_2:6611562-6611581 Msa0392930:intron 55.0%
AAGGCTCGCAGTGGATCTGT+GGG - chr3_2:6611563-6611582 Msa0392930:intron 55.0%
CAGCTAAGTCGGGGTCAGAA+TGG - chr3_2:6611765-6611784 Msa0392930:intron 55.0%
GCCTGGATCCCTTGGAAGTA+AGG - chr3_2:6611828-6611847 Msa0392930:intron 55.0%
TGCTGCAGCAGCTGACATGT+TGG - chr3_2:6611871-6611890 Msa0392930:intron 55.0%
AGTGATCCTGATGCTCCTGG+TGG - chr3_2:6612177-6612196 Msa0392930:intron 55.0%
GCCTGTCATGCAGCAATCTC+AGG - chr3_2:6612203-6612222 Msa0392930:intron 55.0%
ATGCTGCTGTCTATGGGGCA+AGG - chr3_2:6612440-6612459 Msa0392930:CDS 55.0%
CCATCCCATGAGAGGCAGTT+GGG - chr3_2:6612694-6612713 Msa0392930:intron 55.0%
GGTTTCCCAACTGCCTCTCA+TGG + chr3_2:6612702-6612721 None:intergenic 55.0%
GGCATCAAAACTGGAGGAGG+GGG + chr3_2:6612784-6612803 None:intergenic 55.0%
TTGATGCCTGTACCTGGTGC+CGG - chr3_2:6612796-6612815 Msa0392930:intron 55.0%
ATCGCAACTTCTGGTGGAGC+AGG + chr3_2:6612929-6612948 None:intergenic 55.0%
GCGTTCTGGTCCTCACATAG+GGG - chr3_2:6613003-6613022 Msa0392930:intron 55.0%
CGTTCTGGTCCTCACATAGG+GGG - chr3_2:6613004-6613023 Msa0392930:intron 55.0%
GGATCAGGTCTAAAGGTGGG+AGG + chr3_2:6613052-6613071 None:intergenic 55.0%
CGGGGATCAGGTCTAAAGGT+GGG + chr3_2:6613055-6613074 None:intergenic 55.0%
TCGGGGATCAGGTCTAAAGG+TGG + chr3_2:6613056-6613075 None:intergenic 55.0%
CCTTTAGACCTGATCCCCGA+CGG - chr3_2:6613056-6613075 Msa0392930:intron 55.0%
TAAGTACCTCCGCATCCGTC+GGG + chr3_2:6613074-6613093 None:intergenic 55.0%
!! GCACTAAGCATTCTGAGGCC+AGG + chr3_2:6613270-6613289 None:intergenic 55.0%
GATCGGTCGTGAGATTCGGG+AGG + chr3_2:6606460-6606479 None:intergenic 60.0%
! GAGCGGTGGTGGTTGGAGAT+CGG + chr3_2:6606477-6606496 None:intergenic 60.0%
AGATCGTCGTCAGGAGGAGG+TGG + chr3_2:6606499-6606518 None:intergenic 60.0%
GGTTGGGGTTAGGTGGAGGT+GGG + chr3_2:6606522-6606541 None:intergenic 60.0%
AATCGCGACGACGAGGGTTG+GGG + chr3_2:6606537-6606556 None:intergenic 60.0%
GAAATCGCGACGACGAGGGT+TGG + chr3_2:6606539-6606558 None:intergenic 60.0%
GGTCGAAATCGCGACGACGA+GGG + chr3_2:6606543-6606562 None:intergenic 60.0%
GCTGCGGAGGAGGAGAATAG+CGG + chr3_2:6606699-6606718 None:intergenic 60.0%
GGAGAACGACGAGACTGCTG+CGG + chr3_2:6606715-6606734 None:intergenic 60.0%
GGTGGCTATGAACGTGGAGG+TGG - chr3_2:6608058-6608077 Msa0392930:intron 60.0%
GTGTCCCCCTGGCTGTTGTT+TGG - chr3_2:6609380-6609399 Msa0392930:intron 60.0%
GAGGGGCTGTTTGAAAGCGG+TGG - chr3_2:6610129-6610148 Msa0392930:intron 60.0%
GCAGAGAAGGTTGGACAGCC+TGG - chr3_2:6611811-6611830 Msa0392930:intron 60.0%
GTTGGACAGCCTGGATCCCT+TGG - chr3_2:6611820-6611839 Msa0392930:intron 60.0%
TGCATGACAGGCGTTCCACC+AGG + chr3_2:6612195-6612214 None:intergenic 60.0%
GGAATCGGCGAGACCAGGAT+AGG - chr3_2:6612635-6612654 Msa0392930:intron 60.0%
GCCATCCCATGAGAGGCAGT+TGG - chr3_2:6612693-6612712 Msa0392930:intron 60.0%
CCCAACTGCCTCTCATGGGA+TGG + chr3_2:6612697-6612716 None:intergenic 60.0%
TGATGCCTGTACCTGGTGCC+GGG - chr3_2:6612797-6612816 Msa0392930:intron 60.0%
AGAGAAACCAACCCGGCACC+AGG + chr3_2:6612811-6612830 None:intergenic 60.0%
AGGGTCCCAGAGGCCTGAAT+AGG + chr3_2:6612901-6612920 None:intergenic 60.0%
GCAGGAACAAAGGGTCCCAG+AGG + chr3_2:6612911-6612930 None:intergenic 60.0%
GAGGCTTGTCCCCCTATGTG+AGG + chr3_2:6613016-6613035 None:intergenic 60.0%
CCGTCGGGGATCAGGTCTAA+AGG + chr3_2:6613059-6613078 None:intergenic 60.0%
AAGTACCTCCGCATCCGTCG+GGG + chr3_2:6613073-6613092 None:intergenic 60.0%
GGTCGTGAGATTCGGGAGGG+AGG + chr3_2:6606456-6606475 None:intergenic 65.0%
GTCGTCAGGAGGAGGTGGAG+CGG + chr3_2:6606494-6606513 None:intergenic 65.0%
GGGAGATCGTCGTCAGGAGG+AGG + chr3_2:6606502-6606521 None:intergenic 65.0%
GGTGGGAGATCGTCGTCAGG+AGG + chr3_2:6606505-6606524 None:intergenic 65.0%
GGAGGTGGGAGATCGTCGTC+AGG + chr3_2:6606508-6606527 None:intergenic 65.0%
GGGTTGGGGTTAGGTGGAGG+TGG + chr3_2:6606523-6606542 None:intergenic 65.0%
CGAGGGTTGGGGTTAGGTGG+AGG + chr3_2:6606526-6606545 None:intergenic 65.0%
CGACGAGGGTTGGGGTTAGG+TGG + chr3_2:6606529-6606548 None:intergenic 65.0%
CGACGACGAGGGTTGGGGTT+AGG + chr3_2:6606532-6606551 None:intergenic 65.0%
CGGTCGAAATCGCGACGACG+AGG + chr3_2:6606544-6606563 None:intergenic 65.0%
TGTAGTAACCACCGCCGCCG+CGG + chr3_2:6606618-6606637 None:intergenic 65.0%
GCGGAGGAGGAGAATAGCGG+CGG + chr3_2:6606696-6606715 None:intergenic 65.0%
GAACGACGAGACTGCTGCGG+AGG + chr3_2:6606712-6606731 None:intergenic 65.0%
GAACGTGGAGGTGGAAGGGG+TGG - chr3_2:6608067-6608086 Msa0392930:intron 65.0%
GGGGTGTGTTTGTGTCCCCC+TGG - chr3_2:6609369-6609388 Msa0392930:intron 65.0%
!! TGCCAAGTGGGGGTGCTCGA+AGG - chr3_2:6609614-6609633 Msa0392930:CDS 65.0%
GACCTTCGAGCACCCCCACT+TGG + chr3_2:6609619-6609638 None:intergenic 65.0%
!! GGCGTTCCACCAGGAGCATC+AGG + chr3_2:6612186-6612205 None:intergenic 65.0%
TCGTGGGAATCGGCGAGACC+AGG - chr3_2:6612630-6612649 Msa0392930:intron 65.0%
ACCAACCCGGCACCAGGTAC+AGG + chr3_2:6612805-6612824 None:intergenic 65.0%
GACCTGATCCCCGACGGATG+CGG - chr3_2:6613062-6613081 Msa0392930:intron 65.0%
! GGAGGTGGAGCGGTGGTGGT+TGG + chr3_2:6606484-6606503 None:intergenic 70.0%
AGGAGGAGGTGGAGCGGTGG+TGG + chr3_2:6606488-6606507 None:intergenic 70.0%
GTCAGGAGGAGGTGGAGCGG+TGG + chr3_2:6606491-6606510 None:intergenic 70.0%
TTCGACCGCCGTCCTCACCG+TGG - chr3_2:6606580-6606599 Msa0392930:three_prime_UTR 70.0%
CGACGAGACTGCTGCGGAGG+AGG + chr3_2:6606709-6606728 None:intergenic 70.0%
TCTTTGGCAGCTGGGGGGCC+TGG - chr3_2:6610217-6610236 Msa0392930:intron 70.0%
CTTTGGCAGCTGGGGGGCCT+GGG - chr3_2:6610218-6610237 Msa0392930:intron 70.0%
TTTGGCAGCTGGGGGGCCTG+GGG - chr3_2:6610219-6610238 Msa0392930:intron 70.0%
! GCCTGTACCTGGTGCCGGGT+TGG - chr3_2:6612801-6612820 Msa0392930:intron 70.0%
CTCCGCATCCGTCGGGGATC+AGG + chr3_2:6613067-6613086 None:intergenic 70.0%
CTGATCCCCGACGGATGCGG+AGG - chr3_2:6613065-6613084 Msa0392930:intron 70.0%
GACCGCCGTCCTCACCGTGG+CGG - chr3_2:6606583-6606602 Msa0392930:three_prime_UTR 75.0%
CTCGGCCGCCACGGTGAGGA+CGG + chr3_2:6606591-6606610 None:intergenic 75.0%
! GGCCGCCACGGTGAGGACGG+CGG + chr3_2:6606588-6606607 None:intergenic 80.0%
! CGTCCTCACCGTGGCGGCCG+AGG - chr3_2:6606589-6606608 Msa0392930:three_prime_UTR 80.0%
! CCACCTCGGCCGCCACGGTG+AGG + chr3_2:6606595-6606614 None:intergenic 80.0%
! CCTCACCGTGGCGGCCGAGG+TGG - chr3_2:6606592-6606611 Msa0392930:three_prime_UTR 80.0%
! CGCGGCCACCTCGGCCGCCA+CGG + chr3_2:6606600-6606619 None:intergenic 85.0%
! CGTGGCGGCCGAGGTGGCCG+CGG - chr3_2:6606598-6606617 Msa0392930:three_prime_UTR 85.0%
! CACCGCCGCCGCGGCCACCT+CGG + chr3_2:6606609-6606628 None:intergenic 85.0%
! GGCGGCCGAGGTGGCCGCGG+CGG - chr3_2:6606601-6606620 Msa0392930:three_prime_UTR 90.0%
! GGCCGAGGTGGCCGCGGCGG+CGG - chr3_2:6606604-6606623 Msa0392930:three_prime_UTR 90.0%
! CGAGGTGGCCGCGGCGGCGG+TGG - chr3_2:6606607-6606626 Msa0392930:three_prime_UTR 90.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 6606296 6614272 6606296 ID=Msa0392930;Name=Msa0392930
chr3_2 mRNA 6606296 6614272 6606296 ID=Msa0392930-mRNA-1;Parent=Msa0392930;Name=Msa0392930-mRNA-1;_AED=0.10;_eAED=0.10;_QI=140|1|1|1|1|1|12|498|703
chr3_2 exon 6606296 6606854 6606296 ID=Msa0392930-mRNA-1:exon:1691;Parent=Msa0392930-mRNA-1
chr3_2 exon 6607482 6607661 6607482 ID=Msa0392930-mRNA-1:exon:1690;Parent=Msa0392930-mRNA-1
chr3_2 exon 6607750 6607985 6607750 ID=Msa0392930-mRNA-1:exon:1689;Parent=Msa0392930-mRNA-1
chr3_2 exon 6608344 6608389 6608344 ID=Msa0392930-mRNA-1:exon:1688;Parent=Msa0392930-mRNA-1
chr3_2 exon 6608488 6609285 6608488 ID=Msa0392930-mRNA-1:exon:1687;Parent=Msa0392930-mRNA-1
chr3_2 exon 6609394 6609462 6609394 ID=Msa0392930-mRNA-1:exon:1686;Parent=Msa0392930-mRNA-1
chr3_2 exon 6609613 6609660 6609613 ID=Msa0392930-mRNA-1:exon:1685;Parent=Msa0392930-mRNA-1
chr3_2 exon 6609804 6609878 6609804 ID=Msa0392930-mRNA-1:exon:1684;Parent=Msa0392930-mRNA-1
chr3_2 exon 6609983 6610057 6609983 ID=Msa0392930-mRNA-1:exon:1683;Parent=Msa0392930-mRNA-1
chr3_2 exon 6610933 6610984 6610933 ID=Msa0392930-mRNA-1:exon:1682;Parent=Msa0392930-mRNA-1
chr3_2 exon 6612408 6612529 6612408 ID=Msa0392930-mRNA-1:exon:1681;Parent=Msa0392930-mRNA-1
chr3_2 exon 6613783 6614272 6613783 ID=Msa0392930-mRNA-1:exon:1680;Parent=Msa0392930-mRNA-1
chr3_2 five_prime_UTR 6614133 6614272 6614133 ID=Msa0392930-mRNA-1:five_prime_utr;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6613783 6614132 6613783 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6612408 6612529 6612408 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6610933 6610984 6610933 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6609983 6610057 6609983 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6609804 6609878 6609804 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6609613 6609660 6609613 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6609394 6609462 6609394 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6608488 6609285 6608488 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6608344 6608389 6608344 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6607750 6607985 6607750 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6607482 6607661 6607482 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 CDS 6606794 6606854 6606794 ID=Msa0392930-mRNA-1:cds;Parent=Msa0392930-mRNA-1
chr3_2 three_prime_UTR 6606296 6606793 6606296 ID=Msa0392930-mRNA-1:three_prime_utr;Parent=Msa0392930-mRNA-1
Gene Sequence

>Msa0392930

ATGGCCGAAGTCGAAAACCTCCCTCCCGAATCTCACGACCGATCTCCAACCACCACCGCTCCACCTCCTCCTGACGACGATCTCCCACCTCCACCTAACCCCAACCCTCGTCGTCGCGATTTCGACCGTCGAGACGACAGAGATTTCGACCGCCGTCCTCACCGTGGCGGCCGAGGTGGCCGCGGCGGCGGTGGTTACTACAATAACCGTGATAGAGACATCAAACGCCGTCGTAGTCCTAGCCCTAACTATCGTGACCGCCGCTATTCTCCTCCTCCGCAGCAGTCTCGTCGTTCTCCTCCGCCGTATAAGAGATCTAGAAGGGGTAGTCCTCATAGACCTAACGACAGGTTTGGCCATGATCACTTCGGTGGCTATGAACGTGGAGGTGGAAGGGGTGGCTATGCAGATGATAGACCTGGTGGCAGATTTCCACATCGATCTGGAGGGGGATATCAAAACGGAATTTCTGATCTGGATGCCAATCGCGGTTATGCAGATTTGCCAAGTGGGGGTGCTCGAAGAGAGGGGTTGATGTCCTATAAGCAATTCATCCAGGAGCTTGAAGATGATATACTGCCATCTGAAGCTGAGCGTAGATACCAAGAGTACAAGTCAGAGTATATTACTACCCAAAAACGAGCTTATTTCAATACCCACAAGGATGCGGAGTGGTTGAAAGATAAGTATCATCCAACAAATTTACTTACAGTAATTGAAAGGAGGAATGAAAATGCTCGACGTTTGGCAAAGGAGTTTTTGCTTGATTTGCAAAGTGGAGCACTAGACATAAATCCAGGTTTAAACTCTGCATCCACTAAATCAGAGCAAGCCAGTGAGCCCAATTCAGAGGAGGAAACAGATGCTGGTGGTAAAAGAAGAAGACATGGCAGGGGATCTAATAAGGACAACGATTTCTCTGCTGCTCCAAAGGCTCACCCTGTCAGTTCTGAACCTAGAAGGATACAAGAAGATATTCATCAGGTTCAGGCTGTTGTTCGTAAGCTTGACAAGGAAAAAGGGATTGAAGATAATATTTTATGTACTAATGATCATAGTAAAAATAGTGATAAGGCTCGCAGTGGATCTGTGGGCCCTGTAGTAATTATCCGTGGCTTAACATCTATTAAGGGCTTAGAGGGTGTTGAGCTACTGGACACACTTATAACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGAATGCTTGAGACTAGTGATGCCAAAGGTTTTAGGCATGTGAGACCAGAAGGAGCAAGGCATGAAGAAACAGCTAAGTCGGGGTCAGAATGGGAGAAAAAACTTGATTCATTTTGGCAGAGAAGGTTGGACAGCCTGGATCCCTTGGAAGTAAGGACTGCAAAGGAGAAGATAGATGCTGCAGCAGCTGACATGTTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGTTGGAAGTATGGCTGTGGAGCCAAGAGTTGCACAAAGCTTTTTCATGCTGTTGAGTTTGTGTACAAACATCTCAAGCTAAAACACCCAGAGCTTGTGTTGGAATTAACATCAAAATTGCGGGAAGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACGCCTGTCATGCAGCAATCTCAGGACAAGCCTTTAAAGCGAAGGTTACTGGAAGGCCGATTGAAAGATGATCGTGGGAATCGGCGAGACCAGGATAGGAGTGACAGAACAAATGGAGATAGACCTGATAGTTCGCCATCCCATGAGAGGCAGTTGGGAAACCGTGATGAAACAATGTTCGATGCATATGGTGGACCTGCTGTATCATTCAACTCAGATATGCCCCCTCCTCCAGTTTTGATGCCTGTACCTGGTGCCGGGCCTCTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCGATGCAGATGTTTAGGGATCAAGGACCATCTTCGTATGATCCATCAGGAATGACGATGCGTTCTGGTCCTCACATAGGGGGACAAGCCTCTATGATTGCTGTTCCTCCCACCTTTAGACCTGATCCCCGACGGATGCGGAGTTATCAAGACTTGGATGCCCCAGAAGAAGAAGTTACTGTCATAGACTATCGGAGCTTGTAG
Protein sequence

>Msa0392930

MAEVENLPPESHDRSPTTTAPPPPDDDLPPPPNPNPRRRDFDRRDDRDFDRRPHRGGRGGRGGGGYYNNRDRDIKRRRSPSPNYRDRRYSPPPQQSRRSPPPYKRSRRGSPHRPNDRFGHDHFGGYERGGGRGGYADDRPGGRFPHRSGGGYQNGISDLDANRGYADLPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHKDAEWLKDKYHPTNLLTVIERRNENARRLAKEFLLDLQSGALDINPGLNSASTKSEQASEPNSEEETDAGGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEKGIEDNILCTNDHSKNSDKARSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLETSDAKGFRHVRPEGARHEETAKSGSEWEKKLDSFWQRRLDSLDPLEVRTAKEKIDAAAADMLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLREDLYFQNYMNDPDAPGGTPVMQQSQDKPLKRRLLEGRLKDDRGNRRDQDRSDRTNGDRPDSSPSHERQLGNRDETMFDAYGGPAVSFNSDMPPPPVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGPSSYDPSGMTMRSGPHIGGQASMIAVPPTFRPDPRRMRSYQDLDAPEEEVTVIDYRSL*